Multiple sequence alignment - TraesCS5B01G288200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G288200 chr5B 100.000 2393 0 0 1 2393 473766975 473764583 0.000000e+00 4420.0
1 TraesCS5B01G288200 chr5B 80.507 1262 172 30 653 1868 473782859 473781626 0.000000e+00 900.0
2 TraesCS5B01G288200 chr5B 79.147 1266 197 45 850 2094 473750409 473749190 0.000000e+00 813.0
3 TraesCS5B01G288200 chr5B 80.155 1159 160 38 762 1877 473773791 473772660 0.000000e+00 802.0
4 TraesCS5B01G288200 chr5B 91.212 330 21 6 284 606 473783192 473782864 2.180000e-120 442.0
5 TraesCS5B01G288200 chr5B 87.549 257 23 7 335 589 473774059 473773810 3.010000e-74 289.0
6 TraesCS5B01G288200 chr5B 94.118 51 3 0 284 334 473775389 473775339 7.090000e-11 78.7
7 TraesCS5B01G288200 chr5D 96.308 1896 59 7 206 2101 393897801 393895917 0.000000e+00 3103.0
8 TraesCS5B01G288200 chr5D 81.878 1225 166 30 684 1877 393901085 393899886 0.000000e+00 981.0
9 TraesCS5B01G288200 chr5D 81.344 1265 166 32 653 1878 393904032 393902799 0.000000e+00 965.0
10 TraesCS5B01G288200 chr5D 84.239 368 25 16 283 624 393908421 393908061 6.380000e-86 327.0
11 TraesCS5B01G288200 chr5D 78.409 528 69 32 1587 2094 393885630 393885128 3.870000e-78 302.0
12 TraesCS5B01G288200 chr5D 90.686 204 17 2 403 606 393904238 393904037 1.090000e-68 270.0
13 TraesCS5B01G288200 chr5D 85.088 114 16 1 3 116 393884993 393884881 5.410000e-22 115.0
14 TraesCS5B01G288200 chr5A 95.728 1381 51 7 724 2101 495903279 495901904 0.000000e+00 2217.0
15 TraesCS5B01G288200 chr5A 83.627 1533 188 29 206 1706 495907517 495906016 0.000000e+00 1382.0
16 TraesCS5B01G288200 chr5A 77.558 1867 259 94 311 2094 495901473 495899684 0.000000e+00 979.0
17 TraesCS5B01G288200 chr5A 81.605 1234 161 30 653 1843 495927157 495925947 0.000000e+00 961.0
18 TraesCS5B01G288200 chr5A 95.113 532 17 3 206 736 495903824 495903301 0.000000e+00 830.0
19 TraesCS5B01G288200 chr5A 85.000 360 43 9 255 606 495918601 495918245 2.930000e-94 355.0
20 TraesCS5B01G288200 chr5A 95.050 202 9 1 1 202 495904060 495903860 1.380000e-82 316.0
21 TraesCS5B01G288200 chr5A 91.045 201 9 4 414 606 495927361 495927162 1.820000e-66 263.0
22 TraesCS5B01G288200 chr5A 89.756 205 18 2 1 203 495907776 495907573 2.360000e-65 259.0
23 TraesCS5B01G288200 chr2B 90.554 307 12 8 2100 2393 182140525 182140223 8.020000e-105 390.0
24 TraesCS5B01G288200 chr2A 83.654 312 28 13 2097 2393 768654958 768654655 3.030000e-69 272.0
25 TraesCS5B01G288200 chr2A 85.714 238 23 9 2097 2332 31007322 31007550 8.550000e-60 241.0
26 TraesCS5B01G288200 chr3B 77.743 319 25 21 2097 2393 804374525 804374819 1.150000e-33 154.0
27 TraesCS5B01G288200 chr1A 75.610 246 36 17 2162 2393 582364552 582364787 1.510000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G288200 chr5B 473764583 473766975 2392 True 4420.000000 4420 100.0000 1 2393 1 chr5B.!!$R2 2392
1 TraesCS5B01G288200 chr5B 473749190 473750409 1219 True 813.000000 813 79.1470 850 2094 1 chr5B.!!$R1 1244
2 TraesCS5B01G288200 chr5B 473781626 473783192 1566 True 671.000000 900 85.8595 284 1868 2 chr5B.!!$R4 1584
3 TraesCS5B01G288200 chr5B 473772660 473775389 2729 True 389.900000 802 87.2740 284 1877 3 chr5B.!!$R3 1593
4 TraesCS5B01G288200 chr5D 393895917 393908421 12504 True 1129.200000 3103 86.8910 206 2101 5 chr5D.!!$R2 1895
5 TraesCS5B01G288200 chr5D 393884881 393885630 749 True 208.500000 302 81.7485 3 2094 2 chr5D.!!$R1 2091
6 TraesCS5B01G288200 chr5A 495899684 495907776 8092 True 997.166667 2217 89.4720 1 2101 6 chr5A.!!$R2 2100
7 TraesCS5B01G288200 chr5A 495925947 495927361 1414 True 612.000000 961 86.3250 414 1843 2 chr5A.!!$R3 1429

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.03601 CCACAAGACATTCGCTCCCT 60.036 55.0 0.0 0.0 0.0 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1422 6831 1.135141 ACTCAGAGCTCATCAACTCGC 60.135 52.381 17.77 0.0 37.99 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.244215 TGCTCACTGTTACAAGGGAAGAG 60.244 47.826 0.00 0.00 0.00 2.85
41 42 5.998363 ACAAGGGAAGAGAACACAAAGATAC 59.002 40.000 0.00 0.00 0.00 2.24
51 52 2.288666 CACAAAGATACGACATGGGGG 58.711 52.381 0.00 0.00 0.00 5.40
52 53 1.913419 ACAAAGATACGACATGGGGGT 59.087 47.619 0.00 0.00 0.00 4.95
53 54 2.093128 ACAAAGATACGACATGGGGGTC 60.093 50.000 0.00 0.00 34.42 4.46
54 55 1.874129 AAGATACGACATGGGGGTCA 58.126 50.000 0.00 0.00 37.66 4.02
55 56 1.414158 AGATACGACATGGGGGTCAG 58.586 55.000 0.00 0.00 37.66 3.51
59 60 0.476771 ACGACATGGGGGTCAGTTTT 59.523 50.000 0.00 0.00 37.66 2.43
60 61 1.165270 CGACATGGGGGTCAGTTTTC 58.835 55.000 0.00 0.00 37.66 2.29
61 62 1.544537 CGACATGGGGGTCAGTTTTCA 60.545 52.381 0.00 0.00 37.66 2.69
62 63 2.807676 GACATGGGGGTCAGTTTTCAT 58.192 47.619 0.00 0.00 37.73 2.57
63 64 2.493278 GACATGGGGGTCAGTTTTCATG 59.507 50.000 0.00 0.00 37.73 3.07
64 65 2.158325 ACATGGGGGTCAGTTTTCATGT 60.158 45.455 0.00 0.00 39.90 3.21
66 67 3.885976 TGGGGGTCAGTTTTCATGTAA 57.114 42.857 0.00 0.00 0.00 2.41
68 69 2.823747 GGGGGTCAGTTTTCATGTAACC 59.176 50.000 8.99 0.00 0.00 2.85
69 70 3.499745 GGGGGTCAGTTTTCATGTAACCT 60.500 47.826 8.99 0.00 0.00 3.50
70 71 3.506067 GGGGTCAGTTTTCATGTAACCTG 59.494 47.826 3.62 3.62 0.00 4.00
71 72 4.394729 GGGTCAGTTTTCATGTAACCTGA 58.605 43.478 8.01 8.01 0.00 3.86
72 73 5.010282 GGGTCAGTTTTCATGTAACCTGAT 58.990 41.667 13.89 0.00 0.00 2.90
73 74 5.106157 GGGTCAGTTTTCATGTAACCTGATG 60.106 44.000 13.89 5.33 0.00 3.07
74 75 5.473504 GGTCAGTTTTCATGTAACCTGATGT 59.526 40.000 13.89 0.00 0.00 3.06
75 76 6.373779 GTCAGTTTTCATGTAACCTGATGTG 58.626 40.000 13.89 4.51 0.00 3.21
76 77 6.017109 GTCAGTTTTCATGTAACCTGATGTGT 60.017 38.462 13.89 0.00 0.00 3.72
78 79 5.473504 AGTTTTCATGTAACCTGATGTGTCC 59.526 40.000 8.99 0.00 0.00 4.02
79 80 4.632327 TTCATGTAACCTGATGTGTCCA 57.368 40.909 0.00 0.00 0.00 4.02
80 81 3.937814 TCATGTAACCTGATGTGTCCAC 58.062 45.455 0.00 0.00 0.00 4.02
82 83 3.847671 TGTAACCTGATGTGTCCACAA 57.152 42.857 3.95 0.00 45.41 3.33
83 84 3.738982 TGTAACCTGATGTGTCCACAAG 58.261 45.455 3.95 0.00 45.41 3.16
84 85 3.389656 TGTAACCTGATGTGTCCACAAGA 59.610 43.478 3.95 0.00 45.41 3.02
85 86 2.550830 ACCTGATGTGTCCACAAGAC 57.449 50.000 3.95 0.77 45.41 3.01
95 96 0.036388 TCCACAAGACATTCGCTCCC 60.036 55.000 0.00 0.00 0.00 4.30
96 97 0.036010 CCACAAGACATTCGCTCCCT 60.036 55.000 0.00 0.00 0.00 4.20
97 98 1.081892 CACAAGACATTCGCTCCCTG 58.918 55.000 0.00 0.00 0.00 4.45
99 100 1.347707 ACAAGACATTCGCTCCCTGAA 59.652 47.619 0.00 0.00 0.00 3.02
100 101 2.026822 ACAAGACATTCGCTCCCTGAAT 60.027 45.455 0.00 0.00 36.52 2.57
104 105 2.322355 CATTCGCTCCCTGAATGTCT 57.678 50.000 7.38 0.00 44.81 3.41
105 106 2.208431 CATTCGCTCCCTGAATGTCTC 58.792 52.381 7.38 0.00 44.81 3.36
106 107 1.561643 TTCGCTCCCTGAATGTCTCT 58.438 50.000 0.00 0.00 0.00 3.10
107 108 2.437085 TCGCTCCCTGAATGTCTCTA 57.563 50.000 0.00 0.00 0.00 2.43
109 110 1.339610 CGCTCCCTGAATGTCTCTAGG 59.660 57.143 0.00 0.00 0.00 3.02
112 113 3.452627 GCTCCCTGAATGTCTCTAGGAAA 59.547 47.826 0.00 0.00 31.91 3.13
113 114 4.102367 GCTCCCTGAATGTCTCTAGGAAAT 59.898 45.833 0.00 0.00 31.91 2.17
114 115 5.609423 CTCCCTGAATGTCTCTAGGAAATG 58.391 45.833 0.00 0.00 31.91 2.32
115 116 4.410228 TCCCTGAATGTCTCTAGGAAATGG 59.590 45.833 0.00 0.00 31.91 3.16
116 117 4.133078 CCTGAATGTCTCTAGGAAATGGC 58.867 47.826 0.00 0.00 31.91 4.40
118 119 5.178096 TGAATGTCTCTAGGAAATGGCAA 57.822 39.130 0.00 0.00 0.00 4.52
119 120 4.943705 TGAATGTCTCTAGGAAATGGCAAC 59.056 41.667 0.00 0.00 0.00 4.17
120 121 4.851639 ATGTCTCTAGGAAATGGCAACT 57.148 40.909 0.00 0.00 37.61 3.16
121 122 4.207891 TGTCTCTAGGAAATGGCAACTC 57.792 45.455 0.00 0.00 37.61 3.01
124 125 5.003804 GTCTCTAGGAAATGGCAACTCAAA 58.996 41.667 0.00 0.00 37.61 2.69
125 126 5.123027 GTCTCTAGGAAATGGCAACTCAAAG 59.877 44.000 0.00 0.00 37.61 2.77
126 127 5.013079 TCTCTAGGAAATGGCAACTCAAAGA 59.987 40.000 0.00 0.00 37.61 2.52
127 128 5.819991 TCTAGGAAATGGCAACTCAAAGAT 58.180 37.500 0.00 0.00 37.61 2.40
128 129 5.882557 TCTAGGAAATGGCAACTCAAAGATC 59.117 40.000 0.00 0.00 37.61 2.75
129 130 4.410099 AGGAAATGGCAACTCAAAGATCA 58.590 39.130 0.00 0.00 37.61 2.92
130 131 4.461781 AGGAAATGGCAACTCAAAGATCAG 59.538 41.667 0.00 0.00 37.61 2.90
131 132 3.863142 AATGGCAACTCAAAGATCAGC 57.137 42.857 0.00 0.00 37.61 4.26
132 133 2.275134 TGGCAACTCAAAGATCAGCA 57.725 45.000 0.00 0.00 37.61 4.41
134 135 2.224597 TGGCAACTCAAAGATCAGCAGA 60.225 45.455 0.00 0.00 37.61 4.26
135 136 2.161211 GGCAACTCAAAGATCAGCAGAC 59.839 50.000 0.00 0.00 0.00 3.51
136 137 3.072944 GCAACTCAAAGATCAGCAGACT 58.927 45.455 0.00 0.00 0.00 3.24
137 138 3.124976 GCAACTCAAAGATCAGCAGACTC 59.875 47.826 0.00 0.00 0.00 3.36
139 140 4.613925 ACTCAAAGATCAGCAGACTCAA 57.386 40.909 0.00 0.00 0.00 3.02
140 141 4.567971 ACTCAAAGATCAGCAGACTCAAG 58.432 43.478 0.00 0.00 0.00 3.02
141 142 3.332919 TCAAAGATCAGCAGACTCAAGC 58.667 45.455 0.00 0.00 0.00 4.01
143 144 3.413846 AAGATCAGCAGACTCAAGCAA 57.586 42.857 0.00 0.00 0.00 3.91
144 145 2.697654 AGATCAGCAGACTCAAGCAAC 58.302 47.619 0.00 0.00 0.00 4.17
146 147 2.330440 TCAGCAGACTCAAGCAACAA 57.670 45.000 0.00 0.00 0.00 2.83
147 148 2.216046 TCAGCAGACTCAAGCAACAAG 58.784 47.619 0.00 0.00 0.00 3.16
148 149 0.950116 AGCAGACTCAAGCAACAAGC 59.050 50.000 0.00 0.00 46.19 4.01
159 160 2.396160 GCAACAAGCTCAAGACACAG 57.604 50.000 0.00 0.00 41.15 3.66
160 161 1.598924 GCAACAAGCTCAAGACACAGC 60.599 52.381 0.00 0.00 41.15 4.40
161 162 1.672363 CAACAAGCTCAAGACACAGCA 59.328 47.619 0.00 0.00 38.18 4.41
162 163 1.303309 ACAAGCTCAAGACACAGCAC 58.697 50.000 0.00 0.00 38.18 4.40
163 164 1.302366 CAAGCTCAAGACACAGCACA 58.698 50.000 0.00 0.00 38.18 4.57
164 165 1.003116 CAAGCTCAAGACACAGCACAC 60.003 52.381 0.00 0.00 38.18 3.82
165 166 0.178767 AGCTCAAGACACAGCACACA 59.821 50.000 0.00 0.00 38.18 3.72
166 167 0.305922 GCTCAAGACACAGCACACAC 59.694 55.000 0.00 0.00 35.56 3.82
167 168 1.945387 CTCAAGACACAGCACACACT 58.055 50.000 0.00 0.00 0.00 3.55
168 169 1.863454 CTCAAGACACAGCACACACTC 59.137 52.381 0.00 0.00 0.00 3.51
169 170 1.206849 TCAAGACACAGCACACACTCA 59.793 47.619 0.00 0.00 0.00 3.41
170 171 1.328680 CAAGACACAGCACACACTCAC 59.671 52.381 0.00 0.00 0.00 3.51
171 172 0.179073 AGACACAGCACACACTCACC 60.179 55.000 0.00 0.00 0.00 4.02
172 173 0.179073 GACACAGCACACACTCACCT 60.179 55.000 0.00 0.00 0.00 4.00
173 174 1.068588 GACACAGCACACACTCACCTA 59.931 52.381 0.00 0.00 0.00 3.08
174 175 1.694150 ACACAGCACACACTCACCTAT 59.306 47.619 0.00 0.00 0.00 2.57
175 176 2.897326 ACACAGCACACACTCACCTATA 59.103 45.455 0.00 0.00 0.00 1.31
176 177 3.056536 ACACAGCACACACTCACCTATAG 60.057 47.826 0.00 0.00 0.00 1.31
177 178 3.056536 CACAGCACACACTCACCTATAGT 60.057 47.826 0.00 0.00 0.00 2.12
178 179 4.157840 CACAGCACACACTCACCTATAGTA 59.842 45.833 0.00 0.00 0.00 1.82
179 180 4.158025 ACAGCACACACTCACCTATAGTAC 59.842 45.833 0.00 0.00 0.00 2.73
180 181 4.399618 CAGCACACACTCACCTATAGTACT 59.600 45.833 0.00 0.00 0.00 2.73
181 182 4.641094 AGCACACACTCACCTATAGTACTC 59.359 45.833 0.00 0.00 0.00 2.59
183 184 5.194432 CACACACTCACCTATAGTACTCCT 58.806 45.833 0.00 0.00 0.00 3.69
184 185 6.354938 CACACACTCACCTATAGTACTCCTA 58.645 44.000 0.00 0.00 0.00 2.94
186 187 7.502895 CACACACTCACCTATAGTACTCCTAAT 59.497 40.741 0.00 0.00 0.00 1.73
188 189 9.570468 CACACTCACCTATAGTACTCCTAATTA 57.430 37.037 0.00 0.00 0.00 1.40
211 212 9.975218 ATTAAATCTATCCAAACAAGTAGGTGT 57.025 29.630 0.00 0.00 0.00 4.16
212 213 7.923414 AAATCTATCCAAACAAGTAGGTGTC 57.077 36.000 0.00 0.00 0.00 3.67
215 216 6.833041 TCTATCCAAACAAGTAGGTGTCAAA 58.167 36.000 0.00 0.00 0.00 2.69
216 217 7.458397 TCTATCCAAACAAGTAGGTGTCAAAT 58.542 34.615 0.00 0.00 0.00 2.32
217 218 6.976934 ATCCAAACAAGTAGGTGTCAAATT 57.023 33.333 0.00 0.00 0.00 1.82
218 219 6.783708 TCCAAACAAGTAGGTGTCAAATTT 57.216 33.333 0.00 0.00 0.00 1.82
221 222 6.697019 CCAAACAAGTAGGTGTCAAATTTCAG 59.303 38.462 0.00 0.00 0.00 3.02
223 224 6.867662 ACAAGTAGGTGTCAAATTTCAGAG 57.132 37.500 0.00 0.00 0.00 3.35
224 225 6.357367 ACAAGTAGGTGTCAAATTTCAGAGT 58.643 36.000 0.00 0.00 0.00 3.24
225 226 6.260936 ACAAGTAGGTGTCAAATTTCAGAGTG 59.739 38.462 0.00 0.00 0.00 3.51
226 227 4.757149 AGTAGGTGTCAAATTTCAGAGTGC 59.243 41.667 0.00 0.00 0.00 4.40
227 228 3.825328 AGGTGTCAAATTTCAGAGTGCT 58.175 40.909 0.00 0.00 0.00 4.40
228 229 3.567164 AGGTGTCAAATTTCAGAGTGCTG 59.433 43.478 0.00 0.00 43.67 4.41
238 239 3.934457 TCAGAGTGCTGATGACGTAAA 57.066 42.857 0.00 0.00 45.88 2.01
241 242 3.610242 CAGAGTGCTGATGACGTAAAGTC 59.390 47.826 0.00 0.00 46.22 3.01
242 243 4.617067 CAGAGTGCTGATGACGTAAAGTCT 60.617 45.833 0.00 0.00 46.21 3.24
243 244 6.403104 CAGAGTGCTGATGACGTAAAGTCTC 61.403 48.000 0.00 0.00 46.21 3.36
244 245 8.704046 CAGAGTGCTGATGACGTAAAGTCTCA 62.704 46.154 0.00 1.38 46.21 3.27
253 254 5.809373 GACGTAAAGTCTCAAGTCTGAAC 57.191 43.478 0.00 0.00 46.13 3.18
254 255 4.618965 ACGTAAAGTCTCAAGTCTGAACC 58.381 43.478 0.00 0.00 0.00 3.62
255 256 3.988517 CGTAAAGTCTCAAGTCTGAACCC 59.011 47.826 0.00 0.00 0.00 4.11
259 260 3.242867 AGTCTCAAGTCTGAACCCATCA 58.757 45.455 0.00 0.00 36.38 3.07
261 262 4.103153 AGTCTCAAGTCTGAACCCATCAAA 59.897 41.667 0.00 0.00 37.67 2.69
262 263 4.214332 GTCTCAAGTCTGAACCCATCAAAC 59.786 45.833 0.00 0.00 37.67 2.93
263 264 4.136796 CTCAAGTCTGAACCCATCAAACA 58.863 43.478 0.00 0.00 37.67 2.83
264 265 4.531854 TCAAGTCTGAACCCATCAAACAA 58.468 39.130 0.00 0.00 37.67 2.83
265 266 4.952957 TCAAGTCTGAACCCATCAAACAAA 59.047 37.500 0.00 0.00 37.67 2.83
266 267 5.067674 TCAAGTCTGAACCCATCAAACAAAG 59.932 40.000 0.00 0.00 37.67 2.77
267 268 3.319122 AGTCTGAACCCATCAAACAAAGC 59.681 43.478 0.00 0.00 37.67 3.51
268 269 2.627699 TCTGAACCCATCAAACAAAGCC 59.372 45.455 0.00 0.00 37.67 4.35
269 270 2.629617 CTGAACCCATCAAACAAAGCCT 59.370 45.455 0.00 0.00 37.67 4.58
270 271 2.627699 TGAACCCATCAAACAAAGCCTC 59.372 45.455 0.00 0.00 34.30 4.70
271 272 1.632589 ACCCATCAAACAAAGCCTCC 58.367 50.000 0.00 0.00 0.00 4.30
272 273 0.897621 CCCATCAAACAAAGCCTCCC 59.102 55.000 0.00 0.00 0.00 4.30
273 274 1.550869 CCCATCAAACAAAGCCTCCCT 60.551 52.381 0.00 0.00 0.00 4.20
274 275 1.547372 CCATCAAACAAAGCCTCCCTG 59.453 52.381 0.00 0.00 0.00 4.45
276 277 0.178964 TCAAACAAAGCCTCCCTGGG 60.179 55.000 6.33 6.33 36.00 4.45
318 331 2.508439 GCGCCGTTGCTACTGCTA 60.508 61.111 12.20 0.00 40.48 3.49
337 1631 4.248058 GCTAACCTAAACAACTCCGCTTA 58.752 43.478 0.00 0.00 0.00 3.09
374 1669 3.562182 ACACCTCAAAACTAACCCCAAG 58.438 45.455 0.00 0.00 0.00 3.61
481 1785 0.178964 CTCCCTCCTCCAGCTCCTAG 60.179 65.000 0.00 0.00 0.00 3.02
546 5893 0.952497 ACAATCCACAGTCGCAGCTG 60.952 55.000 10.11 10.11 41.92 4.24
564 5913 3.785982 GCTAGCTCCTCCCCTAGC 58.214 66.667 7.70 4.18 46.59 3.42
589 5938 1.709147 CTTCCGAGGCAGCCAAATCG 61.709 60.000 15.80 14.41 35.02 3.34
606 5955 6.511416 CCAAATCGTACTCTGAATCTCTGAT 58.489 40.000 0.00 0.00 0.00 2.90
607 5956 6.983307 CCAAATCGTACTCTGAATCTCTGATT 59.017 38.462 0.00 0.00 0.00 2.57
608 5957 8.138074 CCAAATCGTACTCTGAATCTCTGATTA 58.862 37.037 0.00 0.00 0.00 1.75
611 5960 7.625828 TCGTACTCTGAATCTCTGATTAACA 57.374 36.000 0.00 0.00 0.00 2.41
612 5961 8.226819 TCGTACTCTGAATCTCTGATTAACAT 57.773 34.615 0.00 0.00 0.00 2.71
613 5962 9.338622 TCGTACTCTGAATCTCTGATTAACATA 57.661 33.333 0.00 0.00 0.00 2.29
633 5982 7.944729 ACATATCATTAAGCATGATTACCCC 57.055 36.000 2.18 0.00 46.06 4.95
634 5983 7.702785 ACATATCATTAAGCATGATTACCCCT 58.297 34.615 2.18 0.00 46.06 4.79
635 5984 7.613022 ACATATCATTAAGCATGATTACCCCTG 59.387 37.037 2.18 0.00 46.06 4.45
636 5985 5.387113 TCATTAAGCATGATTACCCCTGT 57.613 39.130 2.18 0.00 36.94 4.00
639 5988 2.910688 AGCATGATTACCCCTGTACG 57.089 50.000 0.00 0.00 0.00 3.67
640 5989 1.202651 AGCATGATTACCCCTGTACGC 60.203 52.381 0.00 0.00 0.00 4.42
641 5990 1.497991 CATGATTACCCCTGTACGCG 58.502 55.000 3.53 3.53 0.00 6.01
642 5991 1.117150 ATGATTACCCCTGTACGCGT 58.883 50.000 19.17 19.17 0.00 6.01
644 5993 0.174162 GATTACCCCTGTACGCGTGT 59.826 55.000 24.59 12.69 0.00 4.49
645 5994 1.405105 GATTACCCCTGTACGCGTGTA 59.595 52.381 24.59 11.54 0.00 2.90
665 6014 7.682865 GCGTGTATCATGAAAGCGTATTATAAC 59.317 37.037 0.00 0.00 0.00 1.89
715 6065 4.351874 TCCTTCCAAAGATTCAACGACT 57.648 40.909 0.00 0.00 0.00 4.18
720 6070 5.223449 TCCAAAGATTCAACGACTAAGGT 57.777 39.130 0.00 0.00 0.00 3.50
763 6113 8.931385 ATGTGCAATAATTGTCCAACTAATTC 57.069 30.769 0.00 0.00 0.00 2.17
766 6116 7.981225 GTGCAATAATTGTCCAACTAATTCCAT 59.019 33.333 0.00 0.00 0.00 3.41
800 6166 3.244422 ACGGAATGGTGAGCAAAGTCTTA 60.244 43.478 0.00 0.00 0.00 2.10
803 6169 4.702131 GGAATGGTGAGCAAAGTCTTATGT 59.298 41.667 0.00 0.00 0.00 2.29
806 6172 7.067494 GGAATGGTGAGCAAAGTCTTATGTATT 59.933 37.037 0.00 0.00 0.00 1.89
811 6177 4.430007 AGCAAAGTCTTATGTATTCGCGA 58.570 39.130 3.71 3.71 0.00 5.87
812 6178 4.868171 AGCAAAGTCTTATGTATTCGCGAA 59.132 37.500 25.66 25.66 0.00 4.70
833 6199 2.358322 AAAGAAAGCCTTTGGGTCGA 57.642 45.000 0.00 0.00 43.10 4.20
841 6207 0.613260 CCTTTGGGTCGATCTCACCA 59.387 55.000 11.70 4.42 35.35 4.17
847 6213 0.532573 GGTCGATCTCACCAGCTTCA 59.467 55.000 5.95 0.00 33.63 3.02
875 6241 1.030457 ATACGGCCTTTCGATCGAGT 58.970 50.000 18.54 13.63 0.00 4.18
882 6248 1.067846 CCTTTCGATCGAGTGACCACA 60.068 52.381 18.54 0.00 0.00 4.17
885 6251 0.738975 TCGATCGAGTGACCACATCC 59.261 55.000 15.15 0.00 0.00 3.51
909 6290 6.211584 CCTGCTTGACCCGCCTATATATATAT 59.788 42.308 10.10 10.10 0.00 0.86
910 6291 7.396339 CCTGCTTGACCCGCCTATATATATATA 59.604 40.741 11.21 11.21 0.00 0.86
912 6293 9.984590 TGCTTGACCCGCCTATATATATATATA 57.015 33.333 17.68 17.68 31.69 0.86
919 6304 9.197306 CCCGCCTATATATATATATACCTTGCA 57.803 37.037 15.61 0.00 31.69 4.08
1029 6420 3.706373 GAGAAGGGGTCGGCAGCA 61.706 66.667 0.00 0.00 0.00 4.41
1088 6479 4.415332 GAGCACGACGGCGAGGAA 62.415 66.667 22.49 0.00 41.64 3.36
1089 6480 4.719369 AGCACGACGGCGAGGAAC 62.719 66.667 22.49 0.45 41.64 3.62
1098 6492 2.556287 GCGAGGAACAACAAGCCG 59.444 61.111 0.00 0.00 0.00 5.52
1194 6588 2.281761 CTGTTCCGGGCACTGCTT 60.282 61.111 0.00 0.00 0.00 3.91
1267 6665 0.605319 CTGCAACACCGAGGCCTTTA 60.605 55.000 6.77 0.00 0.00 1.85
1301 6699 1.001815 GAAGATCGAGGAGGAGAAGCG 60.002 57.143 0.00 0.00 0.00 4.68
1306 6704 1.103987 CGAGGAGGAGAAGCGGATGA 61.104 60.000 0.00 0.00 0.00 2.92
1357 6755 1.605058 GAACTCCTACCGGCTGCTCA 61.605 60.000 0.00 0.00 0.00 4.26
1396 6794 1.523711 ATTGGCCGGTCGTAGCATG 60.524 57.895 0.00 0.00 0.00 4.06
1405 6807 2.356135 GGTCGTAGCATGTCCATTTGT 58.644 47.619 0.00 0.00 0.00 2.83
1410 6812 4.574421 TCGTAGCATGTCCATTTGTATTGG 59.426 41.667 0.00 0.00 35.45 3.16
1411 6813 4.574421 CGTAGCATGTCCATTTGTATTGGA 59.426 41.667 0.00 0.00 40.96 3.53
1412 6814 5.239306 CGTAGCATGTCCATTTGTATTGGAT 59.761 40.000 0.00 0.00 44.75 3.41
1413 6815 6.426633 CGTAGCATGTCCATTTGTATTGGATA 59.573 38.462 0.00 0.00 44.75 2.59
1414 6816 6.889301 AGCATGTCCATTTGTATTGGATAG 57.111 37.500 0.00 0.00 44.75 2.08
1422 6831 7.121759 GTCCATTTGTATTGGATAGGATGATGG 59.878 40.741 0.00 0.00 44.75 3.51
1458 6867 4.313282 TCTGAGTTTCTGTTGAGCTCATG 58.687 43.478 19.04 11.12 36.36 3.07
1479 6889 9.322773 CTCATGTTTTCAGACTATCATGTACAT 57.677 33.333 1.41 1.41 35.60 2.29
1502 6917 8.096414 ACATATTTGGAAGCAACTTTAGCAATT 58.904 29.630 0.00 0.00 0.00 2.32
1527 6945 5.391523 CCAAGTATGGTAAACAACATCACGG 60.392 44.000 0.00 0.00 42.18 4.94
1534 6952 7.167924 TGGTAAACAACATCACGGTATACTA 57.832 36.000 2.25 0.00 0.00 1.82
1605 7610 4.192317 GGGAAGGCACTGTTAGATGTTAG 58.808 47.826 0.00 0.00 40.86 2.34
1617 7622 6.811954 TGTTAGATGTTAGTGTGTGTTCTCA 58.188 36.000 0.00 0.00 0.00 3.27
1637 7642 6.864342 TCTCATCCTAAGTTGTAGTAACTGC 58.136 40.000 0.00 0.00 0.00 4.40
1660 7665 5.462398 GCCGGTGAAAGTGTTATACAGATAG 59.538 44.000 1.90 0.00 0.00 2.08
1661 7666 6.570692 CCGGTGAAAGTGTTATACAGATAGT 58.429 40.000 0.00 0.00 0.00 2.12
1662 7667 6.696148 CCGGTGAAAGTGTTATACAGATAGTC 59.304 42.308 0.00 0.00 0.00 2.59
1663 7668 7.255569 CGGTGAAAGTGTTATACAGATAGTCA 58.744 38.462 0.00 0.00 0.00 3.41
1664 7669 7.432545 CGGTGAAAGTGTTATACAGATAGTCAG 59.567 40.741 0.00 0.00 0.00 3.51
1665 7670 8.467598 GGTGAAAGTGTTATACAGATAGTCAGA 58.532 37.037 0.00 0.00 0.00 3.27
1686 7691 8.730680 GTCAGATACACAATGGAATTTGTAAGT 58.269 33.333 0.00 0.00 37.73 2.24
1725 7732 6.710295 TGTATGACATACTGCCATAATTCCAC 59.290 38.462 22.85 0.00 36.70 4.02
1727 7734 5.504853 TGACATACTGCCATAATTCCACAA 58.495 37.500 0.00 0.00 0.00 3.33
1768 7776 2.745821 TCATCTCACACTGATTGCAAGC 59.254 45.455 7.99 7.99 0.00 4.01
1798 7812 5.163784 CGTCTCCGTACTATGTTTCTCAGAA 60.164 44.000 0.00 0.00 0.00 3.02
1799 7813 6.618811 GTCTCCGTACTATGTTTCTCAGAAA 58.381 40.000 0.00 0.00 0.00 2.52
1888 10866 1.208052 TGCAAGTATCACAGAGCCTCC 59.792 52.381 0.00 0.00 0.00 4.30
1893 10871 1.066303 GTATCACAGAGCCTCCACTCG 59.934 57.143 0.00 0.00 41.77 4.18
1894 10872 0.323816 ATCACAGAGCCTCCACTCGA 60.324 55.000 0.00 0.00 41.77 4.04
1895 10873 1.214062 CACAGAGCCTCCACTCGAC 59.786 63.158 0.00 0.00 41.77 4.20
1896 10874 1.228583 ACAGAGCCTCCACTCGACA 60.229 57.895 0.00 0.00 41.77 4.35
1898 10876 0.389166 CAGAGCCTCCACTCGACAAC 60.389 60.000 0.00 0.00 41.77 3.32
1899 10877 0.540830 AGAGCCTCCACTCGACAACT 60.541 55.000 0.00 0.00 41.77 3.16
1900 10878 0.109039 GAGCCTCCACTCGACAACTC 60.109 60.000 0.00 0.00 0.00 3.01
1901 10879 1.444553 GCCTCCACTCGACAACTCG 60.445 63.158 0.00 0.00 41.65 4.18
1902 10880 1.957562 CCTCCACTCGACAACTCGT 59.042 57.895 0.00 0.00 41.02 4.18
1903 10881 0.314302 CCTCCACTCGACAACTCGTT 59.686 55.000 0.00 0.00 41.02 3.85
1904 10882 1.538512 CCTCCACTCGACAACTCGTTA 59.461 52.381 0.00 0.00 41.02 3.18
1905 10883 2.163815 CCTCCACTCGACAACTCGTTAT 59.836 50.000 0.00 0.00 41.02 1.89
1906 10884 3.172050 CTCCACTCGACAACTCGTTATG 58.828 50.000 0.00 0.00 41.02 1.90
1949 12341 5.473039 AGCATGAATAGAAACTTGTTTGCC 58.527 37.500 3.27 0.00 0.00 4.52
1982 14664 1.621107 GCACATCAATGAGTTTGGCG 58.379 50.000 0.00 0.00 35.92 5.69
2024 14707 9.988350 ATCTAATATCAACAAAAACTAACAGCG 57.012 29.630 0.00 0.00 0.00 5.18
2098 14781 7.614124 AATGCAAAGAACAAATGAACACTTT 57.386 28.000 0.00 0.00 0.00 2.66
2120 14803 2.438800 TTTTGAACGAAAGGGGGTCA 57.561 45.000 0.00 0.00 0.00 4.02
2121 14804 1.682740 TTTGAACGAAAGGGGGTCAC 58.317 50.000 0.00 0.00 0.00 3.67
2122 14805 0.547075 TTGAACGAAAGGGGGTCACA 59.453 50.000 0.00 0.00 0.00 3.58
2123 14806 0.179040 TGAACGAAAGGGGGTCACAC 60.179 55.000 0.00 0.00 0.00 3.82
2124 14807 0.887836 GAACGAAAGGGGGTCACACC 60.888 60.000 0.00 0.00 37.60 4.16
2143 14826 3.652886 CCCCCTGCCCCATTTTATT 57.347 52.632 0.00 0.00 0.00 1.40
2145 14828 1.343884 CCCCCTGCCCCATTTTATTGA 60.344 52.381 0.00 0.00 0.00 2.57
2147 14830 2.435437 CCCCTGCCCCATTTTATTGAAG 59.565 50.000 0.00 0.00 0.00 3.02
2149 14832 2.500910 CCTGCCCCATTTTATTGAAGCA 59.499 45.455 0.00 0.00 0.00 3.91
2152 14835 3.448301 TGCCCCATTTTATTGAAGCAGAG 59.552 43.478 0.00 0.00 0.00 3.35
2158 14841 2.760634 TTATTGAAGCAGAGCACGGA 57.239 45.000 0.00 0.00 0.00 4.69
2159 14842 2.760634 TATTGAAGCAGAGCACGGAA 57.239 45.000 0.00 0.00 0.00 4.30
2160 14843 1.160137 ATTGAAGCAGAGCACGGAAC 58.840 50.000 0.00 0.00 0.00 3.62
2161 14844 0.884704 TTGAAGCAGAGCACGGAACC 60.885 55.000 0.00 0.00 0.00 3.62
2162 14845 1.301716 GAAGCAGAGCACGGAACCA 60.302 57.895 0.00 0.00 0.00 3.67
2163 14846 1.294659 GAAGCAGAGCACGGAACCAG 61.295 60.000 0.00 0.00 0.00 4.00
2164 14847 2.031163 GCAGAGCACGGAACCAGT 59.969 61.111 0.00 0.00 0.00 4.00
2165 14848 1.598130 GCAGAGCACGGAACCAGTT 60.598 57.895 0.00 0.00 0.00 3.16
2166 14849 1.569479 GCAGAGCACGGAACCAGTTC 61.569 60.000 1.77 1.77 38.80 3.01
2167 14850 0.249868 CAGAGCACGGAACCAGTTCA 60.250 55.000 12.32 0.00 41.20 3.18
2170 14853 0.034059 AGCACGGAACCAGTTCAGAG 59.966 55.000 16.00 10.00 41.20 3.35
2171 14854 0.033504 GCACGGAACCAGTTCAGAGA 59.966 55.000 16.00 0.00 41.20 3.10
2174 14857 3.616560 GCACGGAACCAGTTCAGAGATTA 60.617 47.826 16.00 0.00 41.20 1.75
2175 14858 3.927142 CACGGAACCAGTTCAGAGATTAC 59.073 47.826 16.00 0.00 41.20 1.89
2176 14859 3.576982 ACGGAACCAGTTCAGAGATTACA 59.423 43.478 16.00 0.00 41.20 2.41
2177 14860 3.927142 CGGAACCAGTTCAGAGATTACAC 59.073 47.826 12.32 0.00 41.20 2.90
2180 14863 4.175787 ACCAGTTCAGAGATTACACGAC 57.824 45.455 0.00 0.00 0.00 4.34
2181 14864 3.056749 ACCAGTTCAGAGATTACACGACC 60.057 47.826 0.00 0.00 0.00 4.79
2183 14866 4.169508 CAGTTCAGAGATTACACGACCAG 58.830 47.826 0.00 0.00 0.00 4.00
2184 14867 3.193691 AGTTCAGAGATTACACGACCAGG 59.806 47.826 0.00 0.00 0.00 4.45
2186 14869 2.753452 TCAGAGATTACACGACCAGGAC 59.247 50.000 0.00 0.00 0.00 3.85
2189 14872 1.471684 AGATTACACGACCAGGACGAC 59.528 52.381 18.62 2.62 34.70 4.34
2193 14876 1.226323 CACGACCAGGACGACGATC 60.226 63.158 18.62 0.00 34.70 3.69
2194 14877 1.673337 ACGACCAGGACGACGATCA 60.673 57.895 18.62 0.00 34.70 2.92
2197 14880 0.030908 GACCAGGACGACGATCATCC 59.969 60.000 0.00 0.00 0.00 3.51
2198 14881 0.683179 ACCAGGACGACGATCATCCA 60.683 55.000 0.00 0.00 34.73 3.41
2199 14882 0.031314 CCAGGACGACGATCATCCAG 59.969 60.000 0.00 0.00 34.73 3.86
2200 14883 1.025041 CAGGACGACGATCATCCAGA 58.975 55.000 0.00 0.00 34.73 3.86
2205 14888 1.000827 ACGACGATCATCCAGAGCATC 60.001 52.381 0.00 0.00 31.47 3.91
2206 14889 1.000938 CGACGATCATCCAGAGCATCA 60.001 52.381 0.00 0.00 37.82 3.07
2207 14890 2.544486 CGACGATCATCCAGAGCATCAA 60.544 50.000 0.00 0.00 37.82 2.57
2208 14891 3.058450 GACGATCATCCAGAGCATCAAG 58.942 50.000 0.00 0.00 37.82 3.02
2209 14892 1.799403 CGATCATCCAGAGCATCAAGC 59.201 52.381 0.00 0.00 46.19 4.01
2223 14906 5.506644 GCATCAAGCTCAAAGTAAAAAGC 57.493 39.130 0.00 0.00 41.15 3.51
2224 14907 4.984161 GCATCAAGCTCAAAGTAAAAAGCA 59.016 37.500 0.00 0.00 41.15 3.91
2225 14908 5.463061 GCATCAAGCTCAAAGTAAAAAGCAA 59.537 36.000 0.00 0.00 41.15 3.91
2226 14909 6.018832 GCATCAAGCTCAAAGTAAAAAGCAAA 60.019 34.615 0.00 0.00 41.15 3.68
2227 14910 7.465781 GCATCAAGCTCAAAGTAAAAAGCAAAA 60.466 33.333 0.00 0.00 41.15 2.44
2228 14911 7.897575 TCAAGCTCAAAGTAAAAAGCAAAAA 57.102 28.000 0.00 0.00 37.22 1.94
2229 14912 7.738345 TCAAGCTCAAAGTAAAAAGCAAAAAC 58.262 30.769 0.00 0.00 37.22 2.43
2230 14913 7.386299 TCAAGCTCAAAGTAAAAAGCAAAAACA 59.614 29.630 0.00 0.00 37.22 2.83
2231 14914 7.294676 AGCTCAAAGTAAAAAGCAAAAACAG 57.705 32.000 0.00 0.00 37.22 3.16
2232 14915 5.959527 GCTCAAAGTAAAAAGCAAAAACAGC 59.040 36.000 0.00 0.00 34.86 4.40
2233 14916 6.183360 GCTCAAAGTAAAAAGCAAAAACAGCT 60.183 34.615 0.00 0.00 45.97 4.24
2234 14917 7.010091 GCTCAAAGTAAAAAGCAAAAACAGCTA 59.990 33.333 0.00 0.00 42.53 3.32
2235 14918 8.406172 TCAAAGTAAAAAGCAAAAACAGCTAG 57.594 30.769 0.00 0.00 42.53 3.42
2236 14919 8.247562 TCAAAGTAAAAAGCAAAAACAGCTAGA 58.752 29.630 0.00 0.00 42.53 2.43
2237 14920 8.868916 CAAAGTAAAAAGCAAAAACAGCTAGAA 58.131 29.630 0.00 0.00 42.53 2.10
2238 14921 8.996024 AAGTAAAAAGCAAAAACAGCTAGAAA 57.004 26.923 0.00 0.00 42.53 2.52
2239 14922 8.996024 AGTAAAAAGCAAAAACAGCTAGAAAA 57.004 26.923 0.00 0.00 42.53 2.29
2240 14923 9.087424 AGTAAAAAGCAAAAACAGCTAGAAAAG 57.913 29.630 0.00 0.00 42.53 2.27
2241 14924 9.083080 GTAAAAAGCAAAAACAGCTAGAAAAGA 57.917 29.630 0.00 0.00 42.53 2.52
2242 14925 7.525688 AAAAGCAAAAACAGCTAGAAAAGAC 57.474 32.000 0.00 0.00 42.53 3.01
2243 14926 6.456795 AAGCAAAAACAGCTAGAAAAGACT 57.543 33.333 0.00 0.00 42.53 3.24
2244 14927 7.568199 AAGCAAAAACAGCTAGAAAAGACTA 57.432 32.000 0.00 0.00 42.53 2.59
2245 14928 7.568199 AGCAAAAACAGCTAGAAAAGACTAA 57.432 32.000 0.00 0.00 41.32 2.24
2246 14929 7.643579 AGCAAAAACAGCTAGAAAAGACTAAG 58.356 34.615 0.00 0.00 41.32 2.18
2247 14930 7.499232 AGCAAAAACAGCTAGAAAAGACTAAGA 59.501 33.333 0.00 0.00 41.32 2.10
2248 14931 8.129211 GCAAAAACAGCTAGAAAAGACTAAGAA 58.871 33.333 0.00 0.00 0.00 2.52
2249 14932 9.439537 CAAAAACAGCTAGAAAAGACTAAGAAC 57.560 33.333 0.00 0.00 0.00 3.01
2253 14936 6.931840 ACAGCTAGAAAAGACTAAGAACCAAG 59.068 38.462 0.00 0.00 0.00 3.61
2254 14937 6.931840 CAGCTAGAAAAGACTAAGAACCAAGT 59.068 38.462 0.00 0.00 0.00 3.16
2258 14941 7.793927 AGAAAAGACTAAGAACCAAGTTCAG 57.206 36.000 9.92 2.44 44.11 3.02
2259 14942 6.768381 AGAAAAGACTAAGAACCAAGTTCAGG 59.232 38.462 9.92 2.52 44.11 3.86
2265 14948 3.297134 AGAACCAAGTTCAGGAGCAAA 57.703 42.857 9.92 0.00 44.11 3.68
2269 14952 2.427095 ACCAAGTTCAGGAGCAAACAAC 59.573 45.455 0.00 0.00 0.00 3.32
2272 14955 1.134220 AGTTCAGGAGCAAACAACGGA 60.134 47.619 0.00 0.00 0.00 4.69
2274 14957 1.593196 TCAGGAGCAAACAACGGAAG 58.407 50.000 0.00 0.00 0.00 3.46
2293 14976 4.738252 GGAAGTTTTTGGCTAAGTTGAACG 59.262 41.667 0.00 0.00 0.00 3.95
2294 14977 4.301637 AGTTTTTGGCTAAGTTGAACGG 57.698 40.909 0.00 0.00 0.00 4.44
2299 15003 0.392595 GGCTAAGTTGAACGGAGGGG 60.393 60.000 2.52 0.00 0.00 4.79
2301 15005 1.002773 GCTAAGTTGAACGGAGGGGAA 59.997 52.381 2.52 0.00 0.00 3.97
2302 15006 2.696506 CTAAGTTGAACGGAGGGGAAC 58.303 52.381 0.00 0.00 0.00 3.62
2321 15025 2.520069 ACCAACACAAACACAGGACAA 58.480 42.857 0.00 0.00 0.00 3.18
2322 15026 2.230266 ACCAACACAAACACAGGACAAC 59.770 45.455 0.00 0.00 0.00 3.32
2323 15027 2.230025 CCAACACAAACACAGGACAACA 59.770 45.455 0.00 0.00 0.00 3.33
2324 15028 3.305676 CCAACACAAACACAGGACAACAA 60.306 43.478 0.00 0.00 0.00 2.83
2325 15029 4.302455 CAACACAAACACAGGACAACAAA 58.698 39.130 0.00 0.00 0.00 2.83
2326 15030 4.592485 ACACAAACACAGGACAACAAAA 57.408 36.364 0.00 0.00 0.00 2.44
2327 15031 4.555262 ACACAAACACAGGACAACAAAAG 58.445 39.130 0.00 0.00 0.00 2.27
2328 15032 4.038642 ACACAAACACAGGACAACAAAAGT 59.961 37.500 0.00 0.00 0.00 2.66
2329 15033 5.241949 ACACAAACACAGGACAACAAAAGTA 59.758 36.000 0.00 0.00 0.00 2.24
2330 15034 5.799936 CACAAACACAGGACAACAAAAGTAG 59.200 40.000 0.00 0.00 0.00 2.57
2331 15035 5.708230 ACAAACACAGGACAACAAAAGTAGA 59.292 36.000 0.00 0.00 0.00 2.59
2332 15036 6.207810 ACAAACACAGGACAACAAAAGTAGAA 59.792 34.615 0.00 0.00 0.00 2.10
2333 15037 5.813080 ACACAGGACAACAAAAGTAGAAC 57.187 39.130 0.00 0.00 0.00 3.01
2335 15039 4.881850 CACAGGACAACAAAAGTAGAACCT 59.118 41.667 0.00 0.00 0.00 3.50
2336 15040 5.007724 CACAGGACAACAAAAGTAGAACCTC 59.992 44.000 0.00 0.00 0.00 3.85
2337 15041 4.515567 CAGGACAACAAAAGTAGAACCTCC 59.484 45.833 0.00 0.00 0.00 4.30
2341 15073 2.714808 ACAAAAGTAGAACCTCCCCCT 58.285 47.619 0.00 0.00 0.00 4.79
2342 15074 2.643304 ACAAAAGTAGAACCTCCCCCTC 59.357 50.000 0.00 0.00 0.00 4.30
2343 15075 1.968278 AAAGTAGAACCTCCCCCTCC 58.032 55.000 0.00 0.00 0.00 4.30
2350 15082 2.844839 CCTCCCCCTCCGATGTCC 60.845 72.222 0.00 0.00 0.00 4.02
2354 15086 2.041922 CCCCTCCGATGTCCCTGA 60.042 66.667 0.00 0.00 0.00 3.86
2355 15087 1.460305 CCCCTCCGATGTCCCTGAT 60.460 63.158 0.00 0.00 0.00 2.90
2356 15088 1.056700 CCCCTCCGATGTCCCTGATT 61.057 60.000 0.00 0.00 0.00 2.57
2357 15089 0.839946 CCCTCCGATGTCCCTGATTT 59.160 55.000 0.00 0.00 0.00 2.17
2358 15090 1.202698 CCCTCCGATGTCCCTGATTTC 60.203 57.143 0.00 0.00 0.00 2.17
2359 15091 1.486310 CCTCCGATGTCCCTGATTTCA 59.514 52.381 0.00 0.00 0.00 2.69
2361 15093 2.169352 CTCCGATGTCCCTGATTTCAGT 59.831 50.000 6.81 0.00 42.27 3.41
2362 15094 2.571653 TCCGATGTCCCTGATTTCAGTT 59.428 45.455 6.81 0.00 42.27 3.16
2363 15095 2.679837 CCGATGTCCCTGATTTCAGTTG 59.320 50.000 6.81 0.00 42.27 3.16
2364 15096 2.679837 CGATGTCCCTGATTTCAGTTGG 59.320 50.000 6.81 2.30 42.27 3.77
2365 15097 3.690460 GATGTCCCTGATTTCAGTTGGT 58.310 45.455 6.81 0.00 42.27 3.67
2366 15098 3.140325 TGTCCCTGATTTCAGTTGGTC 57.860 47.619 6.81 1.23 42.27 4.02
2367 15099 2.711009 TGTCCCTGATTTCAGTTGGTCT 59.289 45.455 6.81 0.00 42.27 3.85
2368 15100 3.244561 TGTCCCTGATTTCAGTTGGTCTC 60.245 47.826 6.81 0.21 42.27 3.36
2369 15101 2.305927 TCCCTGATTTCAGTTGGTCTCC 59.694 50.000 6.81 0.00 42.27 3.71
2370 15102 2.619074 CCCTGATTTCAGTTGGTCTCCC 60.619 54.545 6.81 0.00 42.27 4.30
2371 15103 2.619074 CCTGATTTCAGTTGGTCTCCCC 60.619 54.545 6.81 0.00 42.27 4.81
2372 15104 2.040278 CTGATTTCAGTTGGTCTCCCCA 59.960 50.000 0.00 0.00 38.95 4.96
2373 15105 3.498481 CTGATTTCAGTTGGTCTCCCCAA 60.498 47.826 0.00 0.00 41.94 4.12
2379 15111 2.206900 TGGTCTCCCCAAGCCTCA 59.793 61.111 0.00 0.00 41.50 3.86
2380 15112 1.229951 TGGTCTCCCCAAGCCTCAT 60.230 57.895 0.00 0.00 41.50 2.90
2381 15113 1.274703 TGGTCTCCCCAAGCCTCATC 61.275 60.000 0.00 0.00 41.50 2.92
2382 15114 0.985490 GGTCTCCCCAAGCCTCATCT 60.985 60.000 0.00 0.00 0.00 2.90
2383 15115 0.467804 GTCTCCCCAAGCCTCATCTC 59.532 60.000 0.00 0.00 0.00 2.75
2384 15116 0.692419 TCTCCCCAAGCCTCATCTCC 60.692 60.000 0.00 0.00 0.00 3.71
2385 15117 0.984961 CTCCCCAAGCCTCATCTCCA 60.985 60.000 0.00 0.00 0.00 3.86
2386 15118 0.984961 TCCCCAAGCCTCATCTCCAG 60.985 60.000 0.00 0.00 0.00 3.86
2387 15119 1.530771 CCCAAGCCTCATCTCCAGG 59.469 63.158 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.407621 TGTTCTCTTCCCTTGTAACAGTGA 59.592 41.667 0.00 0.00 0.00 3.41
14 15 5.820947 TCTTTGTGTTCTCTTCCCTTGTAAC 59.179 40.000 0.00 0.00 0.00 2.50
28 29 3.374058 CCCCATGTCGTATCTTTGTGTTC 59.626 47.826 0.00 0.00 0.00 3.18
41 42 1.165270 GAAAACTGACCCCCATGTCG 58.835 55.000 0.00 0.00 38.11 4.35
53 54 6.317789 ACACATCAGGTTACATGAAAACTG 57.682 37.500 3.26 0.24 44.09 3.16
54 55 5.473504 GGACACATCAGGTTACATGAAAACT 59.526 40.000 3.26 0.00 0.00 2.66
55 56 5.240623 TGGACACATCAGGTTACATGAAAAC 59.759 40.000 3.26 3.32 0.00 2.43
59 60 3.326297 TGTGGACACATCAGGTTACATGA 59.674 43.478 1.27 1.27 36.21 3.07
60 61 3.673902 TGTGGACACATCAGGTTACATG 58.326 45.455 0.13 0.00 36.21 3.21
61 62 4.041567 TCTTGTGGACACATCAGGTTACAT 59.958 41.667 5.91 0.00 41.52 2.29
62 63 3.389656 TCTTGTGGACACATCAGGTTACA 59.610 43.478 5.91 0.00 41.52 2.41
63 64 3.746492 GTCTTGTGGACACATCAGGTTAC 59.254 47.826 5.91 0.00 43.94 2.50
64 65 4.002906 GTCTTGTGGACACATCAGGTTA 57.997 45.455 5.91 0.00 43.94 2.85
66 67 2.550830 GTCTTGTGGACACATCAGGT 57.449 50.000 5.91 0.00 43.94 4.00
75 76 1.079503 GGAGCGAATGTCTTGTGGAC 58.920 55.000 0.00 0.00 44.70 4.02
76 77 0.036388 GGGAGCGAATGTCTTGTGGA 60.036 55.000 0.00 0.00 0.00 4.02
78 79 1.081892 CAGGGAGCGAATGTCTTGTG 58.918 55.000 0.00 0.00 0.00 3.33
79 80 0.976641 TCAGGGAGCGAATGTCTTGT 59.023 50.000 0.00 0.00 0.00 3.16
80 81 2.099141 TTCAGGGAGCGAATGTCTTG 57.901 50.000 0.00 0.00 0.00 3.02
82 83 2.322355 CATTCAGGGAGCGAATGTCT 57.678 50.000 5.00 0.00 43.06 3.41
86 87 2.114616 AGAGACATTCAGGGAGCGAAT 58.885 47.619 0.00 0.00 33.33 3.34
88 89 2.302260 CTAGAGACATTCAGGGAGCGA 58.698 52.381 0.00 0.00 0.00 4.93
89 90 1.339610 CCTAGAGACATTCAGGGAGCG 59.660 57.143 0.00 0.00 0.00 5.03
90 91 2.672098 TCCTAGAGACATTCAGGGAGC 58.328 52.381 0.00 0.00 0.00 4.70
91 92 5.454471 CCATTTCCTAGAGACATTCAGGGAG 60.454 48.000 0.00 0.00 32.81 4.30
92 93 4.410228 CCATTTCCTAGAGACATTCAGGGA 59.590 45.833 0.00 0.00 0.00 4.20
95 96 4.774124 TGCCATTTCCTAGAGACATTCAG 58.226 43.478 0.00 0.00 0.00 3.02
96 97 4.842531 TGCCATTTCCTAGAGACATTCA 57.157 40.909 0.00 0.00 0.00 2.57
97 98 5.189180 AGTTGCCATTTCCTAGAGACATTC 58.811 41.667 0.00 0.00 0.00 2.67
99 100 4.225942 TGAGTTGCCATTTCCTAGAGACAT 59.774 41.667 0.00 0.00 0.00 3.06
100 101 3.582647 TGAGTTGCCATTTCCTAGAGACA 59.417 43.478 0.00 0.00 0.00 3.41
101 102 4.207891 TGAGTTGCCATTTCCTAGAGAC 57.792 45.455 0.00 0.00 0.00 3.36
102 103 4.908601 TTGAGTTGCCATTTCCTAGAGA 57.091 40.909 0.00 0.00 0.00 3.10
103 104 5.248640 TCTTTGAGTTGCCATTTCCTAGAG 58.751 41.667 0.00 0.00 0.00 2.43
104 105 5.241403 TCTTTGAGTTGCCATTTCCTAGA 57.759 39.130 0.00 0.00 0.00 2.43
105 106 5.649395 TGATCTTTGAGTTGCCATTTCCTAG 59.351 40.000 0.00 0.00 0.00 3.02
106 107 5.569355 TGATCTTTGAGTTGCCATTTCCTA 58.431 37.500 0.00 0.00 0.00 2.94
107 108 4.410099 TGATCTTTGAGTTGCCATTTCCT 58.590 39.130 0.00 0.00 0.00 3.36
109 110 4.171754 GCTGATCTTTGAGTTGCCATTTC 58.828 43.478 0.00 0.00 0.00 2.17
112 113 2.753452 CTGCTGATCTTTGAGTTGCCAT 59.247 45.455 0.00 0.00 0.00 4.40
113 114 2.156917 CTGCTGATCTTTGAGTTGCCA 58.843 47.619 0.00 0.00 0.00 4.92
114 115 2.161211 GTCTGCTGATCTTTGAGTTGCC 59.839 50.000 0.00 0.00 0.00 4.52
115 116 3.072944 AGTCTGCTGATCTTTGAGTTGC 58.927 45.455 0.00 0.00 0.00 4.17
116 117 4.313282 TGAGTCTGCTGATCTTTGAGTTG 58.687 43.478 0.00 0.00 0.00 3.16
118 119 4.567971 CTTGAGTCTGCTGATCTTTGAGT 58.432 43.478 0.00 0.00 0.00 3.41
119 120 3.371591 GCTTGAGTCTGCTGATCTTTGAG 59.628 47.826 0.00 0.00 0.00 3.02
120 121 3.244318 TGCTTGAGTCTGCTGATCTTTGA 60.244 43.478 0.00 0.00 0.00 2.69
121 122 3.072211 TGCTTGAGTCTGCTGATCTTTG 58.928 45.455 0.00 0.00 0.00 2.77
124 125 2.038164 TGTTGCTTGAGTCTGCTGATCT 59.962 45.455 0.00 0.00 0.00 2.75
125 126 2.420642 TGTTGCTTGAGTCTGCTGATC 58.579 47.619 0.00 0.00 0.00 2.92
126 127 2.556144 TGTTGCTTGAGTCTGCTGAT 57.444 45.000 0.00 0.00 0.00 2.90
127 128 2.216046 CTTGTTGCTTGAGTCTGCTGA 58.784 47.619 9.42 0.00 0.00 4.26
128 129 1.334779 GCTTGTTGCTTGAGTCTGCTG 60.335 52.381 9.42 0.00 38.95 4.41
129 130 0.950116 GCTTGTTGCTTGAGTCTGCT 59.050 50.000 9.42 0.00 38.95 4.24
130 131 3.468780 GCTTGTTGCTTGAGTCTGC 57.531 52.632 0.00 0.00 38.95 4.26
140 141 1.598924 GCTGTGTCTTGAGCTTGTTGC 60.599 52.381 0.00 0.00 43.29 4.17
141 142 1.672363 TGCTGTGTCTTGAGCTTGTTG 59.328 47.619 0.00 0.00 36.11 3.33
143 144 1.303309 GTGCTGTGTCTTGAGCTTGT 58.697 50.000 0.00 0.00 36.11 3.16
144 145 1.003116 GTGTGCTGTGTCTTGAGCTTG 60.003 52.381 0.00 0.00 36.11 4.01
146 147 0.178767 TGTGTGCTGTGTCTTGAGCT 59.821 50.000 0.00 0.00 36.11 4.09
147 148 0.305922 GTGTGTGCTGTGTCTTGAGC 59.694 55.000 0.00 0.00 35.65 4.26
148 149 1.863454 GAGTGTGTGCTGTGTCTTGAG 59.137 52.381 0.00 0.00 0.00 3.02
149 150 1.206849 TGAGTGTGTGCTGTGTCTTGA 59.793 47.619 0.00 0.00 0.00 3.02
150 151 1.328680 GTGAGTGTGTGCTGTGTCTTG 59.671 52.381 0.00 0.00 0.00 3.02
152 153 0.179073 GGTGAGTGTGTGCTGTGTCT 60.179 55.000 0.00 0.00 0.00 3.41
153 154 0.179073 AGGTGAGTGTGTGCTGTGTC 60.179 55.000 0.00 0.00 0.00 3.67
154 155 1.119684 TAGGTGAGTGTGTGCTGTGT 58.880 50.000 0.00 0.00 0.00 3.72
155 156 2.462456 ATAGGTGAGTGTGTGCTGTG 57.538 50.000 0.00 0.00 0.00 3.66
156 157 3.165875 ACTATAGGTGAGTGTGTGCTGT 58.834 45.455 4.43 0.00 0.00 4.40
157 158 3.876274 ACTATAGGTGAGTGTGTGCTG 57.124 47.619 4.43 0.00 0.00 4.41
158 159 4.601084 AGTACTATAGGTGAGTGTGTGCT 58.399 43.478 4.43 0.00 0.00 4.40
159 160 4.202030 GGAGTACTATAGGTGAGTGTGTGC 60.202 50.000 4.43 0.00 0.00 4.57
160 161 5.194432 AGGAGTACTATAGGTGAGTGTGTG 58.806 45.833 4.43 0.00 0.00 3.82
161 162 5.453866 AGGAGTACTATAGGTGAGTGTGT 57.546 43.478 4.43 0.00 0.00 3.72
162 163 8.466617 AATTAGGAGTACTATAGGTGAGTGTG 57.533 38.462 4.43 0.00 0.00 3.82
186 187 9.444600 GACACCTACTTGTTTGGATAGATTTAA 57.555 33.333 0.00 0.00 0.00 1.52
188 189 7.458397 TGACACCTACTTGTTTGGATAGATTT 58.542 34.615 0.00 0.00 0.00 2.17
191 192 6.428083 TTGACACCTACTTGTTTGGATAGA 57.572 37.500 0.00 0.00 0.00 1.98
192 193 7.687941 ATTTGACACCTACTTGTTTGGATAG 57.312 36.000 0.00 0.00 0.00 2.08
193 194 8.472007 AAATTTGACACCTACTTGTTTGGATA 57.528 30.769 0.00 0.00 0.00 2.59
194 195 6.976934 AATTTGACACCTACTTGTTTGGAT 57.023 33.333 0.00 0.00 0.00 3.41
195 196 6.378564 TGAAATTTGACACCTACTTGTTTGGA 59.621 34.615 0.00 0.00 0.00 3.53
196 197 6.568869 TGAAATTTGACACCTACTTGTTTGG 58.431 36.000 0.00 0.00 0.00 3.28
197 198 7.479980 TCTGAAATTTGACACCTACTTGTTTG 58.520 34.615 0.00 0.00 0.00 2.93
198 199 7.339466 ACTCTGAAATTTGACACCTACTTGTTT 59.661 33.333 0.00 0.00 0.00 2.83
201 202 6.662616 CACTCTGAAATTTGACACCTACTTG 58.337 40.000 0.00 0.00 0.00 3.16
202 203 5.239525 GCACTCTGAAATTTGACACCTACTT 59.760 40.000 0.00 0.00 0.00 2.24
204 205 4.757149 AGCACTCTGAAATTTGACACCTAC 59.243 41.667 0.00 0.00 0.00 3.18
206 207 3.567164 CAGCACTCTGAAATTTGACACCT 59.433 43.478 0.00 0.00 42.95 4.00
207 208 3.565482 TCAGCACTCTGAAATTTGACACC 59.435 43.478 0.00 0.00 45.69 4.16
208 209 4.818534 TCAGCACTCTGAAATTTGACAC 57.181 40.909 0.00 0.00 45.69 3.67
215 216 8.735759 GACTTTACGTCATCAGCACTCTGAAAT 61.736 40.741 0.00 0.00 42.83 2.17
216 217 7.496989 GACTTTACGTCATCAGCACTCTGAAA 61.497 42.308 0.00 0.00 42.83 2.69
217 218 6.073747 GACTTTACGTCATCAGCACTCTGAA 61.074 44.000 0.00 0.00 42.83 3.02
218 219 4.616143 GACTTTACGTCATCAGCACTCTGA 60.616 45.833 0.00 0.00 43.17 3.27
221 222 3.839293 AGACTTTACGTCATCAGCACTC 58.161 45.455 0.00 0.00 45.32 3.51
223 224 3.575630 TGAGACTTTACGTCATCAGCAC 58.424 45.455 0.00 0.00 45.32 4.40
224 225 3.934457 TGAGACTTTACGTCATCAGCA 57.066 42.857 0.00 0.00 45.32 4.41
225 226 4.238514 ACTTGAGACTTTACGTCATCAGC 58.761 43.478 0.00 0.00 45.32 4.26
226 227 5.570973 CAGACTTGAGACTTTACGTCATCAG 59.429 44.000 0.00 0.00 45.32 2.90
227 228 5.240844 TCAGACTTGAGACTTTACGTCATCA 59.759 40.000 0.00 0.00 45.32 3.07
228 229 5.700846 TCAGACTTGAGACTTTACGTCATC 58.299 41.667 0.00 0.00 45.32 2.92
229 230 5.707242 TCAGACTTGAGACTTTACGTCAT 57.293 39.130 0.00 0.00 45.32 3.06
230 231 5.279384 GTTCAGACTTGAGACTTTACGTCA 58.721 41.667 0.00 0.00 45.32 4.35
231 232 4.680567 GGTTCAGACTTGAGACTTTACGTC 59.319 45.833 0.00 0.00 43.17 4.34
233 234 3.988517 GGGTTCAGACTTGAGACTTTACG 59.011 47.826 0.00 0.00 34.15 3.18
234 235 4.957296 TGGGTTCAGACTTGAGACTTTAC 58.043 43.478 0.00 0.00 34.15 2.01
235 236 5.306937 TGATGGGTTCAGACTTGAGACTTTA 59.693 40.000 0.00 0.00 34.15 1.85
237 238 3.648067 TGATGGGTTCAGACTTGAGACTT 59.352 43.478 0.00 0.00 34.15 3.01
238 239 3.242867 TGATGGGTTCAGACTTGAGACT 58.757 45.455 0.00 0.00 34.15 3.24
241 242 4.136796 TGTTTGATGGGTTCAGACTTGAG 58.863 43.478 0.00 0.00 39.57 3.02
242 243 4.163441 TGTTTGATGGGTTCAGACTTGA 57.837 40.909 0.00 0.00 39.57 3.02
243 244 4.916983 TTGTTTGATGGGTTCAGACTTG 57.083 40.909 0.00 0.00 39.57 3.16
244 245 4.202151 GCTTTGTTTGATGGGTTCAGACTT 60.202 41.667 0.00 0.00 39.57 3.01
245 246 3.319122 GCTTTGTTTGATGGGTTCAGACT 59.681 43.478 0.00 0.00 39.57 3.24
248 249 2.629617 AGGCTTTGTTTGATGGGTTCAG 59.370 45.455 0.00 0.00 35.27 3.02
249 250 2.627699 GAGGCTTTGTTTGATGGGTTCA 59.372 45.455 0.00 0.00 0.00 3.18
251 252 1.970640 GGAGGCTTTGTTTGATGGGTT 59.029 47.619 0.00 0.00 0.00 4.11
252 253 1.632589 GGAGGCTTTGTTTGATGGGT 58.367 50.000 0.00 0.00 0.00 4.51
253 254 0.897621 GGGAGGCTTTGTTTGATGGG 59.102 55.000 0.00 0.00 0.00 4.00
254 255 1.547372 CAGGGAGGCTTTGTTTGATGG 59.453 52.381 0.00 0.00 0.00 3.51
255 256 1.547372 CCAGGGAGGCTTTGTTTGATG 59.453 52.381 0.00 0.00 0.00 3.07
259 260 4.952482 CCCAGGGAGGCTTTGTTT 57.048 55.556 0.00 0.00 35.39 2.83
267 268 4.087892 CGACAGTGCCCAGGGAGG 62.088 72.222 10.89 0.00 37.03 4.30
268 269 4.087892 CCGACAGTGCCCAGGGAG 62.088 72.222 10.89 0.00 0.00 4.30
269 270 4.954118 ACCGACAGTGCCCAGGGA 62.954 66.667 10.89 0.00 0.00 4.20
270 271 3.491598 AAACCGACAGTGCCCAGGG 62.492 63.158 0.00 0.00 0.00 4.45
271 272 2.113139 AAACCGACAGTGCCCAGG 59.887 61.111 0.00 0.00 0.00 4.45
272 273 2.260869 CCAAACCGACAGTGCCCAG 61.261 63.158 0.00 0.00 0.00 4.45
273 274 2.203280 CCAAACCGACAGTGCCCA 60.203 61.111 0.00 0.00 0.00 5.36
274 275 1.966451 CTCCAAACCGACAGTGCCC 60.966 63.158 0.00 0.00 0.00 5.36
276 277 2.946762 GCTCCAAACCGACAGTGC 59.053 61.111 0.00 0.00 0.00 4.40
277 278 1.157870 AACGCTCCAAACCGACAGTG 61.158 55.000 0.00 0.00 0.00 3.66
278 279 1.145377 AACGCTCCAAACCGACAGT 59.855 52.632 0.00 0.00 0.00 3.55
279 280 1.569493 CAACGCTCCAAACCGACAG 59.431 57.895 0.00 0.00 0.00 3.51
280 281 2.539338 GCAACGCTCCAAACCGACA 61.539 57.895 0.00 0.00 0.00 4.35
281 282 1.852067 ATGCAACGCTCCAAACCGAC 61.852 55.000 0.00 0.00 0.00 4.79
282 283 1.599518 ATGCAACGCTCCAAACCGA 60.600 52.632 0.00 0.00 0.00 4.69
318 331 4.007659 CCATAAGCGGAGTTGTTTAGGTT 58.992 43.478 0.00 0.00 0.00 3.50
337 1631 1.480498 GGTGTCAAACTCCCCAACCAT 60.480 52.381 0.00 0.00 0.00 3.55
389 1684 5.552870 GATTAGTTAATCCTCTCTGCCCA 57.447 43.478 1.25 0.00 36.85 5.36
481 1785 0.824759 ATGGTCGACTTGGAGGTAGC 59.175 55.000 16.46 0.00 0.00 3.58
546 5893 1.911269 GCTAGGGGAGGAGCTAGCC 60.911 68.421 12.13 2.59 38.92 3.93
564 5913 0.744771 GGCTGCCTCGGAAGGTTAAG 60.745 60.000 12.43 0.00 45.34 1.85
615 5964 5.179368 CGTACAGGGGTAATCATGCTTAATG 59.821 44.000 0.00 0.00 37.66 1.90
616 5965 5.305585 CGTACAGGGGTAATCATGCTTAAT 58.694 41.667 0.00 0.00 0.00 1.40
617 5966 4.699637 CGTACAGGGGTAATCATGCTTAA 58.300 43.478 0.00 0.00 0.00 1.85
618 5967 3.493699 GCGTACAGGGGTAATCATGCTTA 60.494 47.826 0.00 0.00 0.00 3.09
624 5973 0.173935 CACGCGTACAGGGGTAATCA 59.826 55.000 13.44 0.00 37.07 2.57
625 5974 0.174162 ACACGCGTACAGGGGTAATC 59.826 55.000 13.44 0.00 37.07 1.75
626 5975 1.473258 TACACGCGTACAGGGGTAAT 58.527 50.000 13.44 0.00 37.07 1.89
627 5976 1.405105 GATACACGCGTACAGGGGTAA 59.595 52.381 13.44 0.00 37.07 2.85
628 5977 1.024271 GATACACGCGTACAGGGGTA 58.976 55.000 13.44 9.60 37.07 3.69
630 5979 0.387929 ATGATACACGCGTACAGGGG 59.612 55.000 13.44 0.00 37.07 4.79
631 5980 1.066454 TCATGATACACGCGTACAGGG 59.934 52.381 13.44 0.50 38.93 4.45
632 5981 2.485266 TCATGATACACGCGTACAGG 57.515 50.000 13.44 11.96 0.00 4.00
633 5982 3.301835 GCTTTCATGATACACGCGTACAG 60.302 47.826 13.44 1.44 0.00 2.74
634 5983 2.601314 GCTTTCATGATACACGCGTACA 59.399 45.455 13.44 10.74 0.00 2.90
635 5984 2.346376 CGCTTTCATGATACACGCGTAC 60.346 50.000 13.44 4.62 35.02 3.67
636 5985 1.849829 CGCTTTCATGATACACGCGTA 59.150 47.619 13.44 0.00 35.02 4.42
639 5988 4.452890 AATACGCTTTCATGATACACGC 57.547 40.909 0.00 0.00 0.00 5.34
640 5989 7.886212 CGTTATAATACGCTTTCATGATACACG 59.114 37.037 0.00 1.18 34.45 4.49
687 6037 4.526970 TGAATCTTTGGAAGGATACAGCC 58.473 43.478 0.00 0.00 41.41 4.85
689 6039 5.874810 TCGTTGAATCTTTGGAAGGATACAG 59.125 40.000 0.00 0.00 41.41 2.74
692 6042 6.049955 AGTCGTTGAATCTTTGGAAGGATA 57.950 37.500 0.00 0.00 0.00 2.59
715 6065 8.439971 ACATATAGAATCAATCCTTGCACCTTA 58.560 33.333 0.00 0.00 0.00 2.69
720 6070 6.063404 TGCACATATAGAATCAATCCTTGCA 58.937 36.000 0.00 0.00 32.93 4.08
742 6092 8.947055 AATGGAATTAGTTGGACAATTATTGC 57.053 30.769 4.68 0.00 32.46 3.56
776 6142 1.880027 ACTTTGCTCACCATTCCGTTC 59.120 47.619 0.00 0.00 0.00 3.95
779 6145 1.813513 AGACTTTGCTCACCATTCCG 58.186 50.000 0.00 0.00 0.00 4.30
812 6178 3.028130 TCGACCCAAAGGCTTTCTTTTT 58.972 40.909 10.08 0.00 42.62 1.94
817 6183 2.010497 GAGATCGACCCAAAGGCTTTC 58.990 52.381 10.08 0.00 36.11 2.62
826 6192 0.904865 AAGCTGGTGAGATCGACCCA 60.905 55.000 12.84 7.17 31.84 4.51
833 6199 4.564782 TGAAATCTGAAGCTGGTGAGAT 57.435 40.909 0.00 0.00 0.00 2.75
841 6207 3.378427 GGCCGTATTTGAAATCTGAAGCT 59.622 43.478 0.00 0.00 0.00 3.74
847 6213 4.258543 TCGAAAGGCCGTATTTGAAATCT 58.741 39.130 0.00 0.00 0.00 2.40
875 6241 0.036732 GGTCAAGCAGGATGTGGTCA 59.963 55.000 0.00 0.00 39.31 4.02
882 6248 1.056700 ATAGGCGGGTCAAGCAGGAT 61.057 55.000 0.00 0.00 36.08 3.24
885 6251 3.895232 ATATATAGGCGGGTCAAGCAG 57.105 47.619 0.00 0.00 36.08 4.24
909 6290 0.766674 AGGCGGGGATGCAAGGTATA 60.767 55.000 0.00 0.00 36.28 1.47
910 6291 2.056906 GAGGCGGGGATGCAAGGTAT 62.057 60.000 0.00 0.00 36.28 2.73
912 6293 4.115199 GAGGCGGGGATGCAAGGT 62.115 66.667 0.00 0.00 36.28 3.50
919 6304 2.768022 GGAATTGGGAGGCGGGGAT 61.768 63.158 0.00 0.00 0.00 3.85
925 6310 0.533951 CAAGCTTGGAATTGGGAGGC 59.466 55.000 19.14 0.00 0.00 4.70
975 6362 1.812571 CACAAAACCTCGCAGGCTATT 59.187 47.619 2.50 0.00 39.63 1.73
1029 6420 3.017581 ATCAGCCCGGCCTTCCTT 61.018 61.111 5.55 0.00 0.00 3.36
1098 6492 4.847444 GAGAAGCAGCCCTCCGCC 62.847 72.222 1.80 0.00 38.78 6.13
1136 6530 2.432628 GCACTACGAACCGCTGCT 60.433 61.111 0.00 0.00 0.00 4.24
1149 6543 3.616721 AAGCACTCCGTCCGCACT 61.617 61.111 0.00 0.00 0.00 4.40
1263 6661 2.859165 TCTCCAGCACCTTGGTAAAG 57.141 50.000 0.00 0.00 39.35 1.85
1267 6665 1.280421 GATCTTCTCCAGCACCTTGGT 59.720 52.381 0.00 0.00 39.35 3.67
1330 6728 2.376165 GGTAGGAGTTCCCCCTGGC 61.376 68.421 0.00 0.00 35.30 4.85
1405 6807 4.096681 ACTCGCCATCATCCTATCCAATA 58.903 43.478 0.00 0.00 0.00 1.90
1410 6812 3.667497 TCAACTCGCCATCATCCTATC 57.333 47.619 0.00 0.00 0.00 2.08
1411 6813 3.580022 TCATCAACTCGCCATCATCCTAT 59.420 43.478 0.00 0.00 0.00 2.57
1412 6814 2.965147 TCATCAACTCGCCATCATCCTA 59.035 45.455 0.00 0.00 0.00 2.94
1413 6815 1.764723 TCATCAACTCGCCATCATCCT 59.235 47.619 0.00 0.00 0.00 3.24
1414 6816 2.141517 CTCATCAACTCGCCATCATCC 58.858 52.381 0.00 0.00 0.00 3.51
1422 6831 1.135141 ACTCAGAGCTCATCAACTCGC 60.135 52.381 17.77 0.00 37.99 5.03
1479 6889 7.096551 GGAATTGCTAAAGTTGCTTCCAAATA 58.903 34.615 0.00 0.00 35.86 1.40
1502 6917 5.410132 CGTGATGTTGTTTACCATACTTGGA 59.590 40.000 0.00 0.00 46.92 3.53
1571 6989 3.117663 AGTGCCTTCCCACAAAAGTAGAA 60.118 43.478 0.00 0.00 38.18 2.10
1572 6990 2.441750 AGTGCCTTCCCACAAAAGTAGA 59.558 45.455 0.00 0.00 38.18 2.59
1576 6994 1.402787 ACAGTGCCTTCCCACAAAAG 58.597 50.000 0.00 0.00 38.18 2.27
1605 7610 5.057149 ACAACTTAGGATGAGAACACACAC 58.943 41.667 0.00 0.00 0.00 3.82
1617 7622 4.142004 CCGGCAGTTACTACAACTTAGGAT 60.142 45.833 0.00 0.00 0.00 3.24
1637 7642 6.570692 ACTATCTGTATAACACTTTCACCGG 58.429 40.000 0.00 0.00 0.00 5.28
1660 7665 8.730680 ACTTACAAATTCCATTGTGTATCTGAC 58.269 33.333 3.10 0.00 43.13 3.51
1661 7666 8.862325 ACTTACAAATTCCATTGTGTATCTGA 57.138 30.769 3.10 0.00 43.13 3.27
1662 7667 9.912634 AAACTTACAAATTCCATTGTGTATCTG 57.087 29.630 3.10 0.00 43.13 2.90
1666 7671 9.877178 AACAAAACTTACAAATTCCATTGTGTA 57.123 25.926 3.10 0.00 43.13 2.90
1667 7672 8.785329 AACAAAACTTACAAATTCCATTGTGT 57.215 26.923 3.10 0.00 43.13 3.72
1706 7712 7.517320 TCTATTGTGGAATTATGGCAGTATGT 58.483 34.615 0.00 0.00 39.31 2.29
1711 7717 7.013559 TGTGATTCTATTGTGGAATTATGGCAG 59.986 37.037 0.00 0.00 34.09 4.85
1725 7732 9.499585 GATGAATTGAAGTGTGTGATTCTATTG 57.500 33.333 0.00 0.00 33.19 1.90
1727 7734 9.107177 GAGATGAATTGAAGTGTGTGATTCTAT 57.893 33.333 0.00 0.00 0.00 1.98
1799 7813 7.390718 AGCATAGTTCCGTCTAAATCACTTTTT 59.609 33.333 0.00 0.00 0.00 1.94
1814 7828 8.832521 TGGTTTATTAATGTTAGCATAGTTCCG 58.167 33.333 0.00 0.00 34.39 4.30
1835 7849 9.965902 ATGAACTTCTGAAAGATAGTATGGTTT 57.034 29.630 0.00 0.00 46.36 3.27
1847 7861 7.137490 TGCATAACAGATGAACTTCTGAAAG 57.863 36.000 19.50 10.18 44.88 2.62
1852 7866 8.043113 TGATACTTGCATAACAGATGAACTTCT 58.957 33.333 0.00 0.00 0.00 2.85
1893 10871 9.453325 TTTAAAAATTGGACATAACGAGTTGTC 57.547 29.630 0.00 0.00 41.19 3.18
1894 10872 9.974980 ATTTAAAAATTGGACATAACGAGTTGT 57.025 25.926 0.00 0.00 0.00 3.32
1904 10882 9.729281 ATGCTTTGAGATTTAAAAATTGGACAT 57.271 25.926 0.00 0.00 0.00 3.06
1905 10883 8.991026 CATGCTTTGAGATTTAAAAATTGGACA 58.009 29.630 0.00 0.00 0.00 4.02
1906 10884 9.206870 TCATGCTTTGAGATTTAAAAATTGGAC 57.793 29.630 0.00 0.00 0.00 4.02
1941 12333 2.605837 TGTGTCTAGTCGGCAAACAA 57.394 45.000 0.00 0.00 0.00 2.83
1949 12341 2.196749 GATGTGCCATGTGTCTAGTCG 58.803 52.381 0.00 0.00 0.00 4.18
1968 12368 5.697473 TTAATTGACGCCAAACTCATTGA 57.303 34.783 0.00 0.00 41.85 2.57
1975 12375 7.968405 AGATCAGTTAATTAATTGACGCCAAAC 59.032 33.333 21.48 8.12 35.26 2.93
2024 14707 1.990327 TCCCCTTTTTGGTCCTAGTCC 59.010 52.381 0.00 0.00 0.00 3.85
2102 14785 1.064611 TGTGACCCCCTTTCGTTCAAA 60.065 47.619 0.00 0.00 0.00 2.69
2103 14786 0.547075 TGTGACCCCCTTTCGTTCAA 59.453 50.000 0.00 0.00 0.00 2.69
2105 14788 0.887836 GGTGTGACCCCCTTTCGTTC 60.888 60.000 0.00 0.00 30.04 3.95
2107 14790 2.833957 GGTGTGACCCCCTTTCGT 59.166 61.111 0.00 0.00 30.04 3.85
2125 14808 1.130777 CAATAAAATGGGGCAGGGGG 58.869 55.000 0.00 0.00 0.00 5.40
2126 14809 2.173126 TCAATAAAATGGGGCAGGGG 57.827 50.000 0.00 0.00 0.00 4.79
2127 14810 2.158914 GCTTCAATAAAATGGGGCAGGG 60.159 50.000 0.00 0.00 0.00 4.45
2128 14811 2.500910 TGCTTCAATAAAATGGGGCAGG 59.499 45.455 0.00 0.00 0.00 4.85
2129 14812 3.448301 TCTGCTTCAATAAAATGGGGCAG 59.552 43.478 0.00 0.00 42.17 4.85
2130 14813 3.439154 TCTGCTTCAATAAAATGGGGCA 58.561 40.909 0.00 0.00 0.00 5.36
2131 14814 3.739209 GCTCTGCTTCAATAAAATGGGGC 60.739 47.826 0.00 0.00 0.00 5.80
2132 14815 3.448301 TGCTCTGCTTCAATAAAATGGGG 59.552 43.478 0.00 0.00 0.00 4.96
2133 14816 4.427312 GTGCTCTGCTTCAATAAAATGGG 58.573 43.478 0.00 0.00 0.00 4.00
2134 14817 4.100529 CGTGCTCTGCTTCAATAAAATGG 58.899 43.478 0.00 0.00 0.00 3.16
2135 14818 4.100529 CCGTGCTCTGCTTCAATAAAATG 58.899 43.478 0.00 0.00 0.00 2.32
2136 14819 4.009675 TCCGTGCTCTGCTTCAATAAAAT 58.990 39.130 0.00 0.00 0.00 1.82
2137 14820 3.407698 TCCGTGCTCTGCTTCAATAAAA 58.592 40.909 0.00 0.00 0.00 1.52
2139 14822 2.742053 GTTCCGTGCTCTGCTTCAATAA 59.258 45.455 0.00 0.00 0.00 1.40
2143 14826 1.301716 GGTTCCGTGCTCTGCTTCA 60.302 57.895 0.00 0.00 0.00 3.02
2145 14828 1.302033 CTGGTTCCGTGCTCTGCTT 60.302 57.895 0.00 0.00 0.00 3.91
2147 14830 1.569479 GAACTGGTTCCGTGCTCTGC 61.569 60.000 2.35 0.00 33.64 4.26
2149 14832 0.034059 CTGAACTGGTTCCGTGCTCT 59.966 55.000 10.44 0.00 38.77 4.09
2152 14835 0.033504 TCTCTGAACTGGTTCCGTGC 59.966 55.000 10.44 0.00 38.77 5.34
2158 14841 4.557205 GTCGTGTAATCTCTGAACTGGTT 58.443 43.478 0.00 0.00 0.00 3.67
2159 14842 3.056749 GGTCGTGTAATCTCTGAACTGGT 60.057 47.826 0.00 0.00 0.00 4.00
2160 14843 3.056821 TGGTCGTGTAATCTCTGAACTGG 60.057 47.826 0.00 0.00 0.00 4.00
2161 14844 4.169508 CTGGTCGTGTAATCTCTGAACTG 58.830 47.826 0.00 0.00 0.00 3.16
2162 14845 3.193691 CCTGGTCGTGTAATCTCTGAACT 59.806 47.826 0.00 0.00 0.00 3.01
2163 14846 3.192844 TCCTGGTCGTGTAATCTCTGAAC 59.807 47.826 0.00 0.00 0.00 3.18
2164 14847 3.192844 GTCCTGGTCGTGTAATCTCTGAA 59.807 47.826 0.00 0.00 0.00 3.02
2165 14848 2.753452 GTCCTGGTCGTGTAATCTCTGA 59.247 50.000 0.00 0.00 0.00 3.27
2166 14849 2.478031 CGTCCTGGTCGTGTAATCTCTG 60.478 54.545 5.15 0.00 0.00 3.35
2167 14850 1.743958 CGTCCTGGTCGTGTAATCTCT 59.256 52.381 5.15 0.00 0.00 3.10
2170 14853 1.792993 CGTCGTCCTGGTCGTGTAATC 60.793 57.143 12.76 0.00 0.00 1.75
2171 14854 0.169672 CGTCGTCCTGGTCGTGTAAT 59.830 55.000 12.76 0.00 0.00 1.89
2174 14857 1.919956 GATCGTCGTCCTGGTCGTGT 61.920 60.000 12.76 0.00 0.00 4.49
2175 14858 1.226323 GATCGTCGTCCTGGTCGTG 60.226 63.158 12.76 7.45 0.00 4.35
2176 14859 1.030488 ATGATCGTCGTCCTGGTCGT 61.030 55.000 12.76 0.00 0.00 4.34
2177 14860 0.317103 GATGATCGTCGTCCTGGTCG 60.317 60.000 7.02 7.02 0.00 4.79
2184 14867 0.382158 TGCTCTGGATGATCGTCGTC 59.618 55.000 8.82 0.00 0.00 4.20
2186 14869 1.000938 TGATGCTCTGGATGATCGTCG 60.001 52.381 8.82 0.00 31.44 5.12
2189 14872 1.799403 GCTTGATGCTCTGGATGATCG 59.201 52.381 0.00 0.00 38.95 3.69
2205 14888 7.517321 TGTTTTTGCTTTTTACTTTGAGCTTG 58.483 30.769 0.00 0.00 36.16 4.01
2206 14889 7.624134 GCTGTTTTTGCTTTTTACTTTGAGCTT 60.624 33.333 0.00 0.00 36.16 3.74
2207 14890 6.183360 GCTGTTTTTGCTTTTTACTTTGAGCT 60.183 34.615 0.00 0.00 36.16 4.09
2208 14891 5.959527 GCTGTTTTTGCTTTTTACTTTGAGC 59.040 36.000 0.00 0.00 35.74 4.26
2209 14892 7.294676 AGCTGTTTTTGCTTTTTACTTTGAG 57.705 32.000 0.00 0.00 37.52 3.02
2210 14893 8.247562 TCTAGCTGTTTTTGCTTTTTACTTTGA 58.752 29.630 0.00 0.00 41.46 2.69
2211 14894 8.406172 TCTAGCTGTTTTTGCTTTTTACTTTG 57.594 30.769 0.00 0.00 41.46 2.77
2212 14895 8.996024 TTCTAGCTGTTTTTGCTTTTTACTTT 57.004 26.923 0.00 0.00 41.46 2.66
2213 14896 8.996024 TTTCTAGCTGTTTTTGCTTTTTACTT 57.004 26.923 0.00 0.00 41.46 2.24
2214 14897 8.996024 TTTTCTAGCTGTTTTTGCTTTTTACT 57.004 26.923 0.00 0.00 41.46 2.24
2215 14898 9.083080 TCTTTTCTAGCTGTTTTTGCTTTTTAC 57.917 29.630 0.00 0.00 41.46 2.01
2216 14899 9.083080 GTCTTTTCTAGCTGTTTTTGCTTTTTA 57.917 29.630 0.00 0.00 41.46 1.52
2217 14900 7.819415 AGTCTTTTCTAGCTGTTTTTGCTTTTT 59.181 29.630 0.00 0.00 41.46 1.94
2218 14901 7.323420 AGTCTTTTCTAGCTGTTTTTGCTTTT 58.677 30.769 0.00 0.00 41.46 2.27
2219 14902 6.867550 AGTCTTTTCTAGCTGTTTTTGCTTT 58.132 32.000 0.00 0.00 41.46 3.51
2220 14903 6.456795 AGTCTTTTCTAGCTGTTTTTGCTT 57.543 33.333 0.00 0.00 41.46 3.91
2221 14904 7.499232 TCTTAGTCTTTTCTAGCTGTTTTTGCT 59.501 33.333 0.00 0.00 43.79 3.91
2222 14905 7.639945 TCTTAGTCTTTTCTAGCTGTTTTTGC 58.360 34.615 0.00 0.00 0.00 3.68
2223 14906 9.439537 GTTCTTAGTCTTTTCTAGCTGTTTTTG 57.560 33.333 0.00 0.00 0.00 2.44
2224 14907 8.622157 GGTTCTTAGTCTTTTCTAGCTGTTTTT 58.378 33.333 0.00 0.00 0.00 1.94
2225 14908 7.773690 TGGTTCTTAGTCTTTTCTAGCTGTTTT 59.226 33.333 0.00 0.00 0.00 2.43
2226 14909 7.280356 TGGTTCTTAGTCTTTTCTAGCTGTTT 58.720 34.615 0.00 0.00 0.00 2.83
2227 14910 6.827727 TGGTTCTTAGTCTTTTCTAGCTGTT 58.172 36.000 0.00 0.00 0.00 3.16
2228 14911 6.420913 TGGTTCTTAGTCTTTTCTAGCTGT 57.579 37.500 0.00 0.00 0.00 4.40
2229 14912 6.931840 ACTTGGTTCTTAGTCTTTTCTAGCTG 59.068 38.462 0.00 0.00 0.00 4.24
2230 14913 7.068686 ACTTGGTTCTTAGTCTTTTCTAGCT 57.931 36.000 0.00 0.00 0.00 3.32
2231 14914 7.441458 TGAACTTGGTTCTTAGTCTTTTCTAGC 59.559 37.037 10.98 0.00 42.39 3.42
2232 14915 8.888579 TGAACTTGGTTCTTAGTCTTTTCTAG 57.111 34.615 10.98 0.00 42.39 2.43
2233 14916 7.931948 CCTGAACTTGGTTCTTAGTCTTTTCTA 59.068 37.037 10.98 0.00 42.39 2.10
2234 14917 6.768381 CCTGAACTTGGTTCTTAGTCTTTTCT 59.232 38.462 10.98 0.00 42.39 2.52
2235 14918 6.766467 TCCTGAACTTGGTTCTTAGTCTTTTC 59.234 38.462 10.98 0.00 42.39 2.29
2236 14919 6.659824 TCCTGAACTTGGTTCTTAGTCTTTT 58.340 36.000 10.98 0.00 42.39 2.27
2237 14920 6.248569 TCCTGAACTTGGTTCTTAGTCTTT 57.751 37.500 10.98 0.00 42.39 2.52
2238 14921 5.743422 GCTCCTGAACTTGGTTCTTAGTCTT 60.743 44.000 10.98 0.00 42.39 3.01
2239 14922 4.262678 GCTCCTGAACTTGGTTCTTAGTCT 60.263 45.833 10.98 0.00 42.39 3.24
2240 14923 3.997681 GCTCCTGAACTTGGTTCTTAGTC 59.002 47.826 10.98 0.00 42.39 2.59
2241 14924 3.391296 TGCTCCTGAACTTGGTTCTTAGT 59.609 43.478 10.98 0.00 42.39 2.24
2242 14925 4.008074 TGCTCCTGAACTTGGTTCTTAG 57.992 45.455 10.98 7.18 42.39 2.18
2243 14926 4.431416 TTGCTCCTGAACTTGGTTCTTA 57.569 40.909 10.98 0.00 42.39 2.10
2244 14927 3.297134 TTGCTCCTGAACTTGGTTCTT 57.703 42.857 10.98 0.00 42.39 2.52
2245 14928 2.952310 GTTTGCTCCTGAACTTGGTTCT 59.048 45.455 10.98 0.00 42.39 3.01
2246 14929 2.687935 TGTTTGCTCCTGAACTTGGTTC 59.312 45.455 3.75 3.75 42.26 3.62
2247 14930 2.733956 TGTTTGCTCCTGAACTTGGTT 58.266 42.857 0.00 0.00 0.00 3.67
2248 14931 2.427095 GTTGTTTGCTCCTGAACTTGGT 59.573 45.455 0.00 0.00 0.00 3.67
2249 14932 2.541588 CGTTGTTTGCTCCTGAACTTGG 60.542 50.000 0.00 0.00 0.00 3.61
2253 14936 1.305201 TCCGTTGTTTGCTCCTGAAC 58.695 50.000 0.00 0.00 0.00 3.18
2254 14937 1.946768 CTTCCGTTGTTTGCTCCTGAA 59.053 47.619 0.00 0.00 0.00 3.02
2258 14941 2.863401 AAACTTCCGTTGTTTGCTCC 57.137 45.000 0.00 0.00 36.43 4.70
2259 14942 3.305897 CCAAAAACTTCCGTTGTTTGCTC 59.694 43.478 0.00 0.00 37.64 4.26
2265 14948 3.697542 ACTTAGCCAAAAACTTCCGTTGT 59.302 39.130 0.00 0.00 32.65 3.32
2269 14952 4.561735 TCAACTTAGCCAAAAACTTCCG 57.438 40.909 0.00 0.00 0.00 4.30
2272 14955 4.399934 TCCGTTCAACTTAGCCAAAAACTT 59.600 37.500 0.00 0.00 0.00 2.66
2274 14957 4.287720 CTCCGTTCAACTTAGCCAAAAAC 58.712 43.478 0.00 0.00 0.00 2.43
2276 14959 2.882137 CCTCCGTTCAACTTAGCCAAAA 59.118 45.455 0.00 0.00 0.00 2.44
2277 14960 2.500229 CCTCCGTTCAACTTAGCCAAA 58.500 47.619 0.00 0.00 0.00 3.28
2278 14961 1.271163 CCCTCCGTTCAACTTAGCCAA 60.271 52.381 0.00 0.00 0.00 4.52
2279 14962 0.323629 CCCTCCGTTCAACTTAGCCA 59.676 55.000 0.00 0.00 0.00 4.75
2280 14963 0.392595 CCCCTCCGTTCAACTTAGCC 60.393 60.000 0.00 0.00 0.00 3.93
2281 14964 0.611714 TCCCCTCCGTTCAACTTAGC 59.388 55.000 0.00 0.00 0.00 3.09
2282 14965 2.614734 GGTTCCCCTCCGTTCAACTTAG 60.615 54.545 0.00 0.00 0.00 2.18
2283 14966 1.348696 GGTTCCCCTCCGTTCAACTTA 59.651 52.381 0.00 0.00 0.00 2.24
2284 14967 0.109913 GGTTCCCCTCCGTTCAACTT 59.890 55.000 0.00 0.00 0.00 2.66
2285 14968 1.057851 TGGTTCCCCTCCGTTCAACT 61.058 55.000 0.00 0.00 0.00 3.16
2286 14969 0.179012 TTGGTTCCCCTCCGTTCAAC 60.179 55.000 0.00 0.00 0.00 3.18
2288 14971 1.346479 TGTTGGTTCCCCTCCGTTCA 61.346 55.000 0.00 0.00 0.00 3.18
2293 14976 1.037493 GTTTGTGTTGGTTCCCCTCC 58.963 55.000 0.00 0.00 0.00 4.30
2294 14977 1.407618 GTGTTTGTGTTGGTTCCCCTC 59.592 52.381 0.00 0.00 0.00 4.30
2299 15003 2.490115 TGTCCTGTGTTTGTGTTGGTTC 59.510 45.455 0.00 0.00 0.00 3.62
2301 15005 2.208132 TGTCCTGTGTTTGTGTTGGT 57.792 45.000 0.00 0.00 0.00 3.67
2302 15006 2.230025 TGTTGTCCTGTGTTTGTGTTGG 59.770 45.455 0.00 0.00 0.00 3.77
2303 15007 3.567576 TGTTGTCCTGTGTTTGTGTTG 57.432 42.857 0.00 0.00 0.00 3.33
2312 15016 4.881850 AGGTTCTACTTTTGTTGTCCTGTG 59.118 41.667 0.00 0.00 33.34 3.66
2314 15018 4.515567 GGAGGTTCTACTTTTGTTGTCCTG 59.484 45.833 0.00 0.00 34.04 3.86
2316 15020 3.819337 GGGAGGTTCTACTTTTGTTGTCC 59.181 47.826 0.00 0.00 0.00 4.02
2321 15025 2.643304 GAGGGGGAGGTTCTACTTTTGT 59.357 50.000 0.00 0.00 0.00 2.83
2322 15026 2.026169 GGAGGGGGAGGTTCTACTTTTG 60.026 54.545 0.00 0.00 0.00 2.44
2323 15027 2.276391 GGAGGGGGAGGTTCTACTTTT 58.724 52.381 0.00 0.00 0.00 2.27
2324 15028 1.900337 CGGAGGGGGAGGTTCTACTTT 60.900 57.143 0.00 0.00 0.00 2.66
2325 15029 0.325390 CGGAGGGGGAGGTTCTACTT 60.325 60.000 0.00 0.00 0.00 2.24
2326 15030 1.219824 TCGGAGGGGGAGGTTCTACT 61.220 60.000 0.00 0.00 0.00 2.57
2327 15031 0.105607 ATCGGAGGGGGAGGTTCTAC 60.106 60.000 0.00 0.00 0.00 2.59
2328 15032 0.105658 CATCGGAGGGGGAGGTTCTA 60.106 60.000 0.00 0.00 0.00 2.10
2329 15033 1.383248 CATCGGAGGGGGAGGTTCT 60.383 63.158 0.00 0.00 0.00 3.01
2330 15034 1.687297 GACATCGGAGGGGGAGGTTC 61.687 65.000 0.00 0.00 0.00 3.62
2331 15035 1.689582 GACATCGGAGGGGGAGGTT 60.690 63.158 0.00 0.00 0.00 3.50
2332 15036 2.041819 GACATCGGAGGGGGAGGT 60.042 66.667 0.00 0.00 0.00 3.85
2333 15037 2.844839 GGACATCGGAGGGGGAGG 60.845 72.222 0.00 0.00 0.00 4.30
2335 15039 3.364964 AGGGACATCGGAGGGGGA 61.365 66.667 0.00 0.00 0.00 4.81
2336 15040 2.972589 ATCAGGGACATCGGAGGGGG 62.973 65.000 0.00 0.00 0.00 5.40
2337 15041 1.056700 AATCAGGGACATCGGAGGGG 61.057 60.000 0.00 0.00 0.00 4.79
2341 15073 2.988010 CTGAAATCAGGGACATCGGA 57.012 50.000 2.38 0.00 40.20 4.55
2364 15096 0.467804 GAGATGAGGCTTGGGGAGAC 59.532 60.000 0.00 0.00 0.00 3.36
2365 15097 0.692419 GGAGATGAGGCTTGGGGAGA 60.692 60.000 0.00 0.00 0.00 3.71
2366 15098 0.984961 TGGAGATGAGGCTTGGGGAG 60.985 60.000 0.00 0.00 0.00 4.30
2367 15099 0.984961 CTGGAGATGAGGCTTGGGGA 60.985 60.000 0.00 0.00 0.00 4.81
2368 15100 1.530771 CTGGAGATGAGGCTTGGGG 59.469 63.158 0.00 0.00 0.00 4.96
2369 15101 1.530771 CCTGGAGATGAGGCTTGGG 59.469 63.158 0.00 0.00 0.00 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.