Multiple sequence alignment - TraesCS5B01G286900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G286900 chr5B 100.000 5110 0 0 1 5110 473174281 473179390 0.000000e+00 9437.0
1 TraesCS5B01G286900 chr5B 93.820 178 9 2 2463 2640 157026368 157026193 3.030000e-67 267.0
2 TraesCS5B01G286900 chr5B 98.113 53 0 1 918 970 473175151 473175202 1.960000e-14 91.6
3 TraesCS5B01G286900 chr5B 98.113 53 0 1 871 922 473175198 473175250 1.960000e-14 91.6
4 TraesCS5B01G286900 chr5D 96.506 3806 102 17 918 4708 393455384 393459173 0.000000e+00 6263.0
5 TraesCS5B01G286900 chr5D 95.166 931 28 8 1 922 393454514 393455436 0.000000e+00 1454.0
6 TraesCS5B01G286900 chr5D 96.429 168 6 0 2462 2629 92111547 92111714 1.400000e-70 278.0
7 TraesCS5B01G286900 chr5A 96.120 1572 51 7 918 2483 495319294 495320861 0.000000e+00 2556.0
8 TraesCS5B01G286900 chr5A 93.182 1056 62 7 2602 3656 495320923 495321969 0.000000e+00 1543.0
9 TraesCS5B01G286900 chr5A 92.809 1043 33 20 3698 4708 495321963 495322995 0.000000e+00 1472.0
10 TraesCS5B01G286900 chr5A 88.219 730 35 15 1 716 495318507 495319199 0.000000e+00 824.0
11 TraesCS5B01G286900 chr5A 87.245 196 21 4 4750 4942 643867131 643867325 2.400000e-53 220.0
12 TraesCS5B01G286900 chr5A 94.667 75 2 2 849 922 495319272 495319345 1.160000e-21 115.0
13 TraesCS5B01G286900 chr1A 86.190 1050 105 27 994 2018 499635206 499634172 0.000000e+00 1099.0
14 TraesCS5B01G286900 chr1A 81.770 938 129 29 2627 3551 499633650 499632742 0.000000e+00 747.0
15 TraesCS5B01G286900 chr1A 78.860 421 62 15 2051 2460 499634058 499633654 5.080000e-65 259.0
16 TraesCS5B01G286900 chr1A 77.254 488 58 30 3836 4282 499632480 499632005 2.380000e-58 237.0
17 TraesCS5B01G286900 chr1A 89.474 57 6 0 793 849 467545112 467545056 7.100000e-09 73.1
18 TraesCS5B01G286900 chr1D 84.956 1130 119 33 918 2018 404062675 404061568 0.000000e+00 1098.0
19 TraesCS5B01G286900 chr1D 81.537 937 127 30 2627 3551 404061018 404060116 0.000000e+00 730.0
20 TraesCS5B01G286900 chr1D 94.857 175 7 2 2463 2635 250661965 250661791 6.520000e-69 272.0
21 TraesCS5B01G286900 chr1D 94.798 173 9 0 2457 2629 238940209 238940381 2.340000e-68 270.0
22 TraesCS5B01G286900 chr1D 77.729 458 49 28 3836 4248 404059851 404059402 1.110000e-56 231.0
23 TraesCS5B01G286900 chr1D 77.218 417 72 17 2051 2460 404061422 404061022 6.660000e-54 222.0
24 TraesCS5B01G286900 chr1D 82.781 151 11 3 23 159 404063223 404063074 2.500000e-23 121.0
25 TraesCS5B01G286900 chr1B 81.983 938 122 33 2629 3551 543475515 543474610 0.000000e+00 752.0
26 TraesCS5B01G286900 chr1B 87.367 562 54 13 1469 2018 543476580 543476024 3.360000e-176 628.0
27 TraesCS5B01G286900 chr1B 94.722 360 16 1 4754 5110 286768902 286768543 1.610000e-154 556.0
28 TraesCS5B01G286900 chr1B 81.852 540 64 16 918 1426 543477126 543476590 1.700000e-114 424.0
29 TraesCS5B01G286900 chr1B 76.145 415 73 16 2051 2462 543475910 543475519 1.450000e-45 195.0
30 TraesCS5B01G286900 chr1B 95.000 120 6 0 3838 3957 543474345 543474226 6.750000e-44 189.0
31 TraesCS5B01G286900 chr1B 76.471 374 42 27 3991 4338 543474168 543473815 1.470000e-35 161.0
32 TraesCS5B01G286900 chr3B 98.338 361 5 1 4750 5110 43041638 43041279 2.600000e-177 632.0
33 TraesCS5B01G286900 chr3B 91.706 422 27 4 1602 2018 758332956 758333374 3.430000e-161 579.0
34 TraesCS5B01G286900 chr3B 89.744 312 31 1 2627 2938 758333886 758334196 1.030000e-106 398.0
35 TraesCS5B01G286900 chr3B 80.217 460 52 12 2014 2465 758333459 758333887 4.970000e-80 309.0
36 TraesCS5B01G286900 chr3B 94.318 176 9 1 2463 2638 628473382 628473556 8.430000e-68 268.0
37 TraesCS5B01G286900 chr6A 91.627 418 26 5 1604 2018 580184995 580185406 2.060000e-158 569.0
38 TraesCS5B01G286900 chr6A 91.388 418 26 6 1604 2018 333828397 333828807 9.600000e-157 564.0
39 TraesCS5B01G286900 chr6A 90.705 312 28 1 2627 2938 580185866 580186176 1.020000e-111 414.0
40 TraesCS5B01G286900 chr6A 89.744 312 30 2 2627 2938 333829253 333829562 1.030000e-106 398.0
41 TraesCS5B01G286900 chr6A 87.892 223 20 4 2014 2233 333828879 333829097 6.570000e-64 255.0
42 TraesCS5B01G286900 chr6A 87.500 224 20 4 2014 2233 580185491 580185710 8.490000e-63 252.0
43 TraesCS5B01G286900 chr6A 83.951 81 9 4 4744 4824 307873449 307873373 1.970000e-09 75.0
44 TraesCS5B01G286900 chr3A 89.385 358 36 2 4754 5110 96026832 96026476 2.810000e-122 449.0
45 TraesCS5B01G286900 chr3A 89.106 358 37 2 4754 5110 96078588 96078232 1.310000e-120 444.0
46 TraesCS5B01G286900 chr3A 83.696 92 5 10 4754 4843 176163923 176163840 1.530000e-10 78.7
47 TraesCS5B01G286900 chr7A 89.109 303 32 1 2627 2929 684490671 684490370 4.830000e-100 375.0
48 TraesCS5B01G286900 chr7A 90.980 255 15 4 1770 2018 684491383 684491131 2.280000e-88 337.0
49 TraesCS5B01G286900 chr7A 96.512 86 3 0 1604 1689 684509096 684509011 5.330000e-30 143.0
50 TraesCS5B01G286900 chr7A 97.561 41 1 0 788 828 105360832 105360792 2.550000e-08 71.3
51 TraesCS5B01G286900 chr4D 96.988 166 5 0 2463 2628 22589302 22589467 3.900000e-71 279.0
52 TraesCS5B01G286900 chr4D 96.875 32 1 0 825 856 259497284 259497253 3.000000e-03 54.7
53 TraesCS5B01G286900 chr4A 95.294 170 8 0 2459 2628 362068080 362067911 2.340000e-68 270.0
54 TraesCS5B01G286900 chr4A 89.583 144 14 1 4750 4892 156797275 156797132 1.130000e-41 182.0
55 TraesCS5B01G286900 chr2D 92.513 187 12 2 2444 2628 161906830 161907016 3.030000e-67 267.0
56 TraesCS5B01G286900 chr2D 89.796 49 4 1 779 827 23335800 23335847 1.540000e-05 62.1
57 TraesCS5B01G286900 chr6B 88.889 63 6 1 4756 4818 131727662 131727601 5.490000e-10 76.8
58 TraesCS5B01G286900 chr6B 100.000 30 0 0 825 854 53728645 53728674 7.150000e-04 56.5
59 TraesCS5B01G286900 chr6B 100.000 30 0 0 825 854 53740734 53740763 7.150000e-04 56.5
60 TraesCS5B01G286900 chr7B 97.059 34 1 0 825 858 245070418 245070451 1.990000e-04 58.4
61 TraesCS5B01G286900 chrUn 96.970 33 1 0 824 856 30237480 30237448 7.150000e-04 56.5
62 TraesCS5B01G286900 chrUn 96.774 31 1 0 814 844 89507850 89507880 9.000000e-03 52.8
63 TraesCS5B01G286900 chr2A 94.595 37 0 2 819 853 756898315 756898279 7.150000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G286900 chr5B 473174281 473179390 5109 False 9437.000000 9437 100.000000 1 5110 1 chr5B.!!$F1 5109
1 TraesCS5B01G286900 chr5D 393454514 393459173 4659 False 3858.500000 6263 95.836000 1 4708 2 chr5D.!!$F2 4707
2 TraesCS5B01G286900 chr5A 495318507 495322995 4488 False 1302.000000 2556 92.999400 1 4708 5 chr5A.!!$F2 4707
3 TraesCS5B01G286900 chr1A 499632005 499635206 3201 True 585.500000 1099 81.018500 994 4282 4 chr1A.!!$R2 3288
4 TraesCS5B01G286900 chr1D 404059402 404063223 3821 True 480.400000 1098 80.844200 23 4248 5 chr1D.!!$R2 4225
5 TraesCS5B01G286900 chr1B 543473815 543477126 3311 True 391.500000 752 83.136333 918 4338 6 chr1B.!!$R2 3420
6 TraesCS5B01G286900 chr3B 758332956 758334196 1240 False 428.666667 579 87.222333 1602 2938 3 chr3B.!!$F2 1336
7 TraesCS5B01G286900 chr6A 580184995 580186176 1181 False 411.666667 569 89.944000 1604 2938 3 chr6A.!!$F2 1334
8 TraesCS5B01G286900 chr6A 333828397 333829562 1165 False 405.666667 564 89.674667 1604 2938 3 chr6A.!!$F1 1334
9 TraesCS5B01G286900 chr7A 684490370 684491383 1013 True 356.000000 375 90.044500 1770 2929 2 chr7A.!!$R3 1159

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
267 288 0.103572 TCCGAAATCCGATCGAACCC 59.896 55.000 18.66 0.59 42.76 4.11 F
268 289 0.104304 CCGAAATCCGATCGAACCCT 59.896 55.000 18.66 0.00 42.76 4.34 F
271 292 0.468648 AAATCCGATCGAACCCTCCC 59.531 55.000 18.66 0.00 0.00 4.30 F
534 570 0.470341 GTCCCTTGTCCCCTAGATGC 59.530 60.000 0.00 0.00 0.00 3.91 F
536 572 0.471617 CCCTTGTCCCCTAGATGCTG 59.528 60.000 0.00 0.00 0.00 4.41 F
1378 1485 0.669318 GACTTCATTCCGTGCACCGA 60.669 55.000 12.15 7.64 39.56 4.69 F
2658 2942 1.275291 GCCACTACCAGAACACAGCTA 59.725 52.381 0.00 0.00 0.00 3.32 F
3261 3552 8.362464 TGTAGTCAGTAATCCATGTAGTTTCT 57.638 34.615 0.00 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1416 1525 2.992847 TCAGAGACAGACCACCCTAA 57.007 50.000 0.0 0.0 0.00 2.69 R
1555 1666 3.152341 CCACAGCCTGAAAATGAGAACT 58.848 45.455 0.0 0.0 0.00 3.01 R
1840 1960 9.030452 ACTATCATGTAAAATGTTTAGGGCAAA 57.970 29.630 0.0 0.0 0.00 3.68 R
2500 2784 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.0 0.0 46.20 2.69 R
2566 2850 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.0 0.0 0.00 4.63 R
3205 3496 2.246849 AGGGGAGAAGTAGATACGGGTT 59.753 50.000 0.0 0.0 0.00 4.11 R
3612 3925 0.099436 GGCTTCAGCAAATACAGCGG 59.901 55.000 0.3 0.0 44.36 5.52 R
4944 5365 0.027194 CATGCCATCGAGCTTTGACG 59.973 55.000 0.0 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
251 272 3.099267 ACTTGATTTAGGCGAGATCCG 57.901 47.619 0.00 0.00 42.21 4.18
267 288 0.103572 TCCGAAATCCGATCGAACCC 59.896 55.000 18.66 0.59 42.76 4.11
268 289 0.104304 CCGAAATCCGATCGAACCCT 59.896 55.000 18.66 0.00 42.76 4.34
269 290 1.488527 CGAAATCCGATCGAACCCTC 58.511 55.000 18.66 5.47 42.76 4.30
270 291 1.867166 GAAATCCGATCGAACCCTCC 58.133 55.000 18.66 0.00 0.00 4.30
271 292 0.468648 AAATCCGATCGAACCCTCCC 59.531 55.000 18.66 0.00 0.00 4.30
272 293 1.408453 AATCCGATCGAACCCTCCCC 61.408 60.000 18.66 0.00 0.00 4.81
286 307 3.851184 CCCCCTCCCCCTCGAGAT 61.851 72.222 15.71 0.00 30.97 2.75
338 359 0.608640 CTCCTTCCACGTAGCAGGTT 59.391 55.000 0.00 0.00 0.00 3.50
411 433 3.243134 CGGACCCTAGTCGATTTCTCTTC 60.243 52.174 0.00 0.00 44.54 2.87
422 444 1.838073 TTTCTCTTCTCGGGGGCCAC 61.838 60.000 4.39 0.00 0.00 5.01
478 500 2.485903 ACCACAGTTTGTCGCGAAATA 58.514 42.857 12.06 0.00 0.00 1.40
515 538 1.217882 AACTTTGGCGTTCGACTGAG 58.782 50.000 0.00 0.19 0.00 3.35
534 570 0.470341 GTCCCTTGTCCCCTAGATGC 59.530 60.000 0.00 0.00 0.00 3.91
536 572 0.471617 CCCTTGTCCCCTAGATGCTG 59.528 60.000 0.00 0.00 0.00 4.41
697 752 4.040952 GCACCTTCTGATACCATGTCCTAT 59.959 45.833 0.00 0.00 0.00 2.57
853 929 3.827817 ATGGATCGGAGGGAGTACATA 57.172 47.619 0.00 0.00 0.00 2.29
915 991 9.341899 CTTGTTTATTTATTTTTCCAGGAGACG 57.658 33.333 0.00 0.00 0.00 4.18
916 992 8.624367 TGTTTATTTATTTTTCCAGGAGACGA 57.376 30.769 0.00 0.00 0.00 4.20
928 1004 6.845758 TCCAGGAGACGACTTATTCTTAAA 57.154 37.500 0.00 0.00 0.00 1.52
929 1005 7.419711 TCCAGGAGACGACTTATTCTTAAAT 57.580 36.000 0.00 0.00 0.00 1.40
930 1006 8.529424 TCCAGGAGACGACTTATTCTTAAATA 57.471 34.615 0.00 0.00 0.00 1.40
931 1007 9.144298 TCCAGGAGACGACTTATTCTTAAATAT 57.856 33.333 0.00 0.00 0.00 1.28
932 1008 9.413048 CCAGGAGACGACTTATTCTTAAATATC 57.587 37.037 0.00 0.00 0.00 1.63
933 1009 9.967346 CAGGAGACGACTTATTCTTAAATATCA 57.033 33.333 0.00 0.00 0.00 2.15
1119 1205 5.099042 ACAGCGGGTTTGATATACTTCTT 57.901 39.130 0.00 0.00 0.00 2.52
1161 1247 3.543680 TCTAGCTGCCCAACTTCATAC 57.456 47.619 0.00 0.00 0.00 2.39
1378 1485 0.669318 GACTTCATTCCGTGCACCGA 60.669 55.000 12.15 7.64 39.56 4.69
1397 1504 3.127030 CCGAAACTCTGGCTTGGTAATTC 59.873 47.826 0.00 0.00 0.00 2.17
1462 1571 6.097554 AGTCCTAAGGTTGATATGTGAGTGAG 59.902 42.308 0.00 0.00 0.00 3.51
1840 1960 6.530019 ACATGTTCTTGTTCAAGAAGGTTT 57.470 33.333 22.85 9.66 39.26 3.27
2467 2751 7.390996 TGGGTGAAAAACGCTTATTTCATACTA 59.609 33.333 9.78 4.06 44.62 1.82
2490 2774 6.416631 ACCTCCGTTCCTAAATATAAGTCC 57.583 41.667 0.00 0.00 0.00 3.85
2528 2812 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
2658 2942 1.275291 GCCACTACCAGAACACAGCTA 59.725 52.381 0.00 0.00 0.00 3.32
3261 3552 8.362464 TGTAGTCAGTAATCCATGTAGTTTCT 57.638 34.615 0.00 0.00 0.00 2.52
3601 3914 8.709386 TTAATGTCTAAAAAGCTTGTTTTGCA 57.291 26.923 7.30 4.73 32.95 4.08
3606 3919 9.323985 TGTCTAAAAAGCTTGTTTTGCAATATT 57.676 25.926 7.30 0.00 36.36 1.28
3613 3926 7.832503 AGCTTGTTTTGCAATATTTATCACC 57.167 32.000 0.00 0.00 36.36 4.02
3614 3927 6.531240 AGCTTGTTTTGCAATATTTATCACCG 59.469 34.615 0.00 0.00 36.36 4.94
3615 3928 6.639671 TTGTTTTGCAATATTTATCACCGC 57.360 33.333 0.00 0.00 31.07 5.68
3616 3929 5.960113 TGTTTTGCAATATTTATCACCGCT 58.040 33.333 0.00 0.00 0.00 5.52
3736 4058 4.702131 GGAGGCATTCTTGTTCATACTTGT 59.298 41.667 0.00 0.00 0.00 3.16
3842 4180 7.824289 TGTACTCAAAATGATAACCTTCCTCTG 59.176 37.037 0.00 0.00 0.00 3.35
4108 4476 2.169978 TGGAAGAGATGGATGCTGACTG 59.830 50.000 0.00 0.00 0.00 3.51
4137 4513 1.574428 CTGGTCCCGTTTGCTTTCG 59.426 57.895 0.00 0.00 0.00 3.46
4368 4761 8.571461 TGAAAATCTGTCTTGATTTATCTGCT 57.429 30.769 3.39 0.00 43.40 4.24
4440 4833 6.121776 TGGACATAGAACATGTGTTTACCT 57.878 37.500 0.00 0.00 38.56 3.08
4444 4837 7.336931 GGACATAGAACATGTGTTTACCTGAAT 59.663 37.037 0.00 0.00 38.56 2.57
4529 4923 3.428870 CAAGATTTTGAGACGTACTGCGT 59.571 43.478 0.00 0.00 46.19 5.24
4630 5049 2.683362 GCCAACTAGCACATCCCTTAAC 59.317 50.000 0.00 0.00 0.00 2.01
4657 5078 1.550976 CTTACCCCTTTGCTCTCTCGT 59.449 52.381 0.00 0.00 0.00 4.18
4684 5105 0.253044 GAGCCAACTAGCACATCCCA 59.747 55.000 0.00 0.00 34.23 4.37
4699 5120 5.478407 CACATCCCATAAACCCAAAACTTC 58.522 41.667 0.00 0.00 0.00 3.01
4700 5121 4.530553 ACATCCCATAAACCCAAAACTTCC 59.469 41.667 0.00 0.00 0.00 3.46
4704 5125 3.907474 CCATAAACCCAAAACTTCCCCTT 59.093 43.478 0.00 0.00 0.00 3.95
4706 5127 3.924114 AAACCCAAAACTTCCCCTTTG 57.076 42.857 0.00 0.00 33.25 2.77
4707 5128 1.128200 ACCCAAAACTTCCCCTTTGC 58.872 50.000 0.00 0.00 32.31 3.68
4708 5129 0.396435 CCCAAAACTTCCCCTTTGCC 59.604 55.000 0.00 0.00 32.31 4.52
4710 5131 1.127343 CAAAACTTCCCCTTTGCCCA 58.873 50.000 0.00 0.00 0.00 5.36
4711 5132 1.699083 CAAAACTTCCCCTTTGCCCAT 59.301 47.619 0.00 0.00 0.00 4.00
4712 5133 2.903135 CAAAACTTCCCCTTTGCCCATA 59.097 45.455 0.00 0.00 0.00 2.74
4713 5134 2.532250 AACTTCCCCTTTGCCCATAG 57.468 50.000 0.00 0.00 0.00 2.23
4714 5135 1.382914 ACTTCCCCTTTGCCCATAGT 58.617 50.000 0.00 0.00 0.00 2.12
4715 5136 1.716503 ACTTCCCCTTTGCCCATAGTT 59.283 47.619 0.00 0.00 0.00 2.24
4716 5137 2.111792 ACTTCCCCTTTGCCCATAGTTT 59.888 45.455 0.00 0.00 0.00 2.66
4717 5138 3.173151 CTTCCCCTTTGCCCATAGTTTT 58.827 45.455 0.00 0.00 0.00 2.43
4718 5139 2.534990 TCCCCTTTGCCCATAGTTTTG 58.465 47.619 0.00 0.00 0.00 2.44
4719 5140 1.066215 CCCCTTTGCCCATAGTTTTGC 60.066 52.381 0.00 0.00 0.00 3.68
4720 5141 1.901833 CCCTTTGCCCATAGTTTTGCT 59.098 47.619 0.00 0.00 0.00 3.91
4721 5142 2.354003 CCCTTTGCCCATAGTTTTGCTG 60.354 50.000 0.00 0.00 0.00 4.41
4722 5143 2.340337 CTTTGCCCATAGTTTTGCTGC 58.660 47.619 0.00 0.00 0.00 5.25
4723 5144 1.631405 TTGCCCATAGTTTTGCTGCT 58.369 45.000 0.00 0.00 0.00 4.24
4724 5145 1.631405 TGCCCATAGTTTTGCTGCTT 58.369 45.000 0.00 0.00 0.00 3.91
4725 5146 1.969923 TGCCCATAGTTTTGCTGCTTT 59.030 42.857 0.00 0.00 0.00 3.51
4726 5147 2.368221 TGCCCATAGTTTTGCTGCTTTT 59.632 40.909 0.00 0.00 0.00 2.27
4727 5148 2.738314 GCCCATAGTTTTGCTGCTTTTG 59.262 45.455 0.00 0.00 0.00 2.44
4728 5149 3.328505 CCCATAGTTTTGCTGCTTTTGG 58.671 45.455 0.00 0.00 0.00 3.28
4729 5150 3.244181 CCCATAGTTTTGCTGCTTTTGGT 60.244 43.478 0.00 0.00 0.00 3.67
4730 5151 3.742369 CCATAGTTTTGCTGCTTTTGGTG 59.258 43.478 0.00 0.00 0.00 4.17
4731 5152 2.314323 AGTTTTGCTGCTTTTGGTGG 57.686 45.000 0.00 0.00 0.00 4.61
4732 5153 1.830477 AGTTTTGCTGCTTTTGGTGGA 59.170 42.857 0.00 0.00 0.00 4.02
4733 5154 2.235898 AGTTTTGCTGCTTTTGGTGGAA 59.764 40.909 0.00 0.00 0.00 3.53
4734 5155 2.600470 TTTGCTGCTTTTGGTGGAAG 57.400 45.000 0.00 0.00 0.00 3.46
4735 5156 0.752054 TTGCTGCTTTTGGTGGAAGG 59.248 50.000 0.00 0.00 0.00 3.46
4736 5157 0.106268 TGCTGCTTTTGGTGGAAGGA 60.106 50.000 0.00 0.00 0.00 3.36
4737 5158 1.039856 GCTGCTTTTGGTGGAAGGAA 58.960 50.000 0.00 0.00 0.00 3.36
4738 5159 1.269778 GCTGCTTTTGGTGGAAGGAAC 60.270 52.381 0.00 0.00 0.00 3.62
4739 5160 2.031120 CTGCTTTTGGTGGAAGGAACA 58.969 47.619 0.00 0.00 0.00 3.18
4740 5161 2.430332 CTGCTTTTGGTGGAAGGAACAA 59.570 45.455 0.00 0.00 0.00 2.83
4741 5162 2.430332 TGCTTTTGGTGGAAGGAACAAG 59.570 45.455 0.00 0.00 0.00 3.16
4742 5163 2.430694 GCTTTTGGTGGAAGGAACAAGT 59.569 45.455 0.00 0.00 0.00 3.16
4743 5164 3.118775 GCTTTTGGTGGAAGGAACAAGTT 60.119 43.478 0.00 0.00 0.00 2.66
4744 5165 4.682787 CTTTTGGTGGAAGGAACAAGTTC 58.317 43.478 4.39 4.39 38.80 3.01
4777 5198 5.545658 TTTTGAAAGATCCAGCGTCATAC 57.454 39.130 0.00 0.00 0.00 2.39
4778 5199 4.471904 TTGAAAGATCCAGCGTCATACT 57.528 40.909 0.00 0.00 0.00 2.12
4779 5200 3.785486 TGAAAGATCCAGCGTCATACTG 58.215 45.455 0.00 0.00 34.82 2.74
4786 5207 2.744787 CAGCGTCATACTGGCATTTC 57.255 50.000 0.00 0.00 0.00 2.17
4787 5208 2.009051 CAGCGTCATACTGGCATTTCA 58.991 47.619 0.00 0.00 0.00 2.69
4788 5209 2.615447 CAGCGTCATACTGGCATTTCAT 59.385 45.455 0.00 0.00 0.00 2.57
4789 5210 3.065786 CAGCGTCATACTGGCATTTCATT 59.934 43.478 0.00 0.00 0.00 2.57
4790 5211 3.065786 AGCGTCATACTGGCATTTCATTG 59.934 43.478 0.00 0.00 0.00 2.82
4791 5212 3.065233 GCGTCATACTGGCATTTCATTGA 59.935 43.478 0.00 0.00 0.00 2.57
4792 5213 4.261322 GCGTCATACTGGCATTTCATTGAT 60.261 41.667 0.00 0.00 0.00 2.57
4793 5214 5.049474 GCGTCATACTGGCATTTCATTGATA 60.049 40.000 0.00 0.00 0.00 2.15
4794 5215 6.513230 GCGTCATACTGGCATTTCATTGATAA 60.513 38.462 0.00 0.00 0.00 1.75
4795 5216 7.073883 CGTCATACTGGCATTTCATTGATAAG 58.926 38.462 0.00 0.00 0.00 1.73
4796 5217 6.860023 GTCATACTGGCATTTCATTGATAAGC 59.140 38.462 0.00 0.00 0.00 3.09
4797 5218 6.546772 TCATACTGGCATTTCATTGATAAGCA 59.453 34.615 6.65 0.00 0.00 3.91
4798 5219 5.258456 ACTGGCATTTCATTGATAAGCAG 57.742 39.130 6.65 5.11 0.00 4.24
4799 5220 4.098960 ACTGGCATTTCATTGATAAGCAGG 59.901 41.667 6.65 2.12 0.00 4.85
4800 5221 4.279982 TGGCATTTCATTGATAAGCAGGA 58.720 39.130 6.65 0.00 0.00 3.86
4801 5222 4.710865 TGGCATTTCATTGATAAGCAGGAA 59.289 37.500 6.65 0.00 0.00 3.36
4802 5223 5.163488 TGGCATTTCATTGATAAGCAGGAAG 60.163 40.000 6.65 0.00 0.00 3.46
4803 5224 4.743644 GCATTTCATTGATAAGCAGGAAGC 59.256 41.667 0.40 0.00 46.19 3.86
4814 5235 2.935481 GCAGGAAGCAATGGAGAAAG 57.065 50.000 0.00 0.00 44.79 2.62
4815 5236 2.440409 GCAGGAAGCAATGGAGAAAGA 58.560 47.619 0.00 0.00 44.79 2.52
4816 5237 3.022406 GCAGGAAGCAATGGAGAAAGAT 58.978 45.455 0.00 0.00 44.79 2.40
4817 5238 4.202441 GCAGGAAGCAATGGAGAAAGATA 58.798 43.478 0.00 0.00 44.79 1.98
4818 5239 4.036144 GCAGGAAGCAATGGAGAAAGATAC 59.964 45.833 0.00 0.00 44.79 2.24
4819 5240 5.188434 CAGGAAGCAATGGAGAAAGATACA 58.812 41.667 0.00 0.00 0.00 2.29
4820 5241 5.649395 CAGGAAGCAATGGAGAAAGATACAA 59.351 40.000 0.00 0.00 0.00 2.41
4821 5242 6.151648 CAGGAAGCAATGGAGAAAGATACAAA 59.848 38.462 0.00 0.00 0.00 2.83
4822 5243 6.376581 AGGAAGCAATGGAGAAAGATACAAAG 59.623 38.462 0.00 0.00 0.00 2.77
4823 5244 6.405176 GGAAGCAATGGAGAAAGATACAAAGG 60.405 42.308 0.00 0.00 0.00 3.11
4824 5245 4.952335 AGCAATGGAGAAAGATACAAAGGG 59.048 41.667 0.00 0.00 0.00 3.95
4825 5246 4.440663 GCAATGGAGAAAGATACAAAGGGC 60.441 45.833 0.00 0.00 0.00 5.19
4826 5247 2.985896 TGGAGAAAGATACAAAGGGCG 58.014 47.619 0.00 0.00 0.00 6.13
4827 5248 2.569853 TGGAGAAAGATACAAAGGGCGA 59.430 45.455 0.00 0.00 0.00 5.54
4828 5249 3.198872 GGAGAAAGATACAAAGGGCGAG 58.801 50.000 0.00 0.00 0.00 5.03
4829 5250 3.198872 GAGAAAGATACAAAGGGCGAGG 58.801 50.000 0.00 0.00 0.00 4.63
4830 5251 2.572104 AGAAAGATACAAAGGGCGAGGT 59.428 45.455 0.00 0.00 0.00 3.85
4831 5252 2.403252 AAGATACAAAGGGCGAGGTG 57.597 50.000 0.00 0.00 0.00 4.00
4832 5253 0.107654 AGATACAAAGGGCGAGGTGC 60.108 55.000 0.00 0.00 45.38 5.01
4841 5262 2.496817 GCGAGGTGCAGGTCCTAG 59.503 66.667 0.00 0.00 45.45 3.02
4842 5263 3.082579 GCGAGGTGCAGGTCCTAGG 62.083 68.421 0.82 0.82 45.45 3.02
4843 5264 1.379977 CGAGGTGCAGGTCCTAGGA 60.380 63.158 7.62 7.62 35.20 2.94
4844 5265 1.668101 CGAGGTGCAGGTCCTAGGAC 61.668 65.000 30.72 30.72 43.87 3.85
4857 5278 4.964593 GTCCTAGGACCAGTTTTGTTACA 58.035 43.478 28.87 0.00 39.08 2.41
4858 5279 5.370679 GTCCTAGGACCAGTTTTGTTACAA 58.629 41.667 28.87 0.00 39.08 2.41
4859 5280 5.237996 GTCCTAGGACCAGTTTTGTTACAAC 59.762 44.000 28.87 0.05 39.08 3.32
4860 5281 5.104444 TCCTAGGACCAGTTTTGTTACAACA 60.104 40.000 7.62 0.00 37.08 3.33
4861 5282 4.976224 AGGACCAGTTTTGTTACAACAC 57.024 40.909 6.29 6.29 38.92 3.32
4862 5283 4.595986 AGGACCAGTTTTGTTACAACACT 58.404 39.130 10.67 10.67 38.92 3.55
4863 5284 5.747342 AGGACCAGTTTTGTTACAACACTA 58.253 37.500 15.29 0.00 38.92 2.74
4864 5285 6.362248 AGGACCAGTTTTGTTACAACACTAT 58.638 36.000 15.29 8.00 38.92 2.12
4865 5286 7.511268 AGGACCAGTTTTGTTACAACACTATA 58.489 34.615 15.29 0.00 38.92 1.31
4866 5287 7.994334 AGGACCAGTTTTGTTACAACACTATAA 59.006 33.333 15.29 0.00 38.92 0.98
4867 5288 8.071967 GGACCAGTTTTGTTACAACACTATAAC 58.928 37.037 15.29 8.00 38.92 1.89
4868 5289 7.933396 ACCAGTTTTGTTACAACACTATAACC 58.067 34.615 15.29 0.00 38.92 2.85
4869 5290 7.776500 ACCAGTTTTGTTACAACACTATAACCT 59.224 33.333 15.29 0.00 38.92 3.50
4870 5291 8.287503 CCAGTTTTGTTACAACACTATAACCTC 58.712 37.037 15.29 0.00 38.92 3.85
4871 5292 8.007716 CAGTTTTGTTACAACACTATAACCTCG 58.992 37.037 15.29 0.00 38.92 4.63
4872 5293 7.927629 AGTTTTGTTACAACACTATAACCTCGA 59.072 33.333 14.30 0.00 38.92 4.04
4873 5294 8.550376 GTTTTGTTACAACACTATAACCTCGAA 58.450 33.333 7.08 0.00 38.92 3.71
4874 5295 8.659925 TTTGTTACAACACTATAACCTCGAAA 57.340 30.769 0.00 0.00 38.92 3.46
4875 5296 8.659925 TTGTTACAACACTATAACCTCGAAAA 57.340 30.769 0.00 0.00 38.92 2.29
4876 5297 8.075593 TGTTACAACACTATAACCTCGAAAAC 57.924 34.615 0.00 0.00 33.17 2.43
4877 5298 7.710044 TGTTACAACACTATAACCTCGAAAACA 59.290 33.333 0.00 0.00 33.17 2.83
4878 5299 8.550376 GTTACAACACTATAACCTCGAAAACAA 58.450 33.333 0.00 0.00 0.00 2.83
4879 5300 7.556733 ACAACACTATAACCTCGAAAACAAA 57.443 32.000 0.00 0.00 0.00 2.83
4880 5301 8.161699 ACAACACTATAACCTCGAAAACAAAT 57.838 30.769 0.00 0.00 0.00 2.32
4881 5302 8.073768 ACAACACTATAACCTCGAAAACAAATG 58.926 33.333 0.00 0.00 0.00 2.32
4882 5303 7.739498 ACACTATAACCTCGAAAACAAATGT 57.261 32.000 0.00 0.00 0.00 2.71
4883 5304 8.161699 ACACTATAACCTCGAAAACAAATGTT 57.838 30.769 0.00 0.00 40.50 2.71
4884 5305 8.073768 ACACTATAACCTCGAAAACAAATGTTG 58.926 33.333 0.00 0.00 38.44 3.33
4885 5306 7.537306 CACTATAACCTCGAAAACAAATGTTGG 59.463 37.037 0.00 0.00 38.44 3.77
4886 5307 3.092334 ACCTCGAAAACAAATGTTGGC 57.908 42.857 0.00 0.00 38.44 4.52
4887 5308 2.223947 ACCTCGAAAACAAATGTTGGCC 60.224 45.455 0.00 0.00 38.44 5.36
4888 5309 2.035832 CCTCGAAAACAAATGTTGGCCT 59.964 45.455 3.32 0.00 38.44 5.19
4889 5310 3.254657 CCTCGAAAACAAATGTTGGCCTA 59.745 43.478 3.32 0.00 38.44 3.93
4890 5311 4.261825 CCTCGAAAACAAATGTTGGCCTAA 60.262 41.667 3.32 0.00 38.44 2.69
4891 5312 5.263968 TCGAAAACAAATGTTGGCCTAAA 57.736 34.783 3.32 0.00 38.44 1.85
4892 5313 5.044558 TCGAAAACAAATGTTGGCCTAAAC 58.955 37.500 3.32 0.75 38.44 2.01
4893 5314 5.047188 CGAAAACAAATGTTGGCCTAAACT 58.953 37.500 3.32 0.00 38.44 2.66
4894 5315 5.522097 CGAAAACAAATGTTGGCCTAAACTT 59.478 36.000 3.32 0.00 38.44 2.66
4895 5316 6.036626 CGAAAACAAATGTTGGCCTAAACTTT 59.963 34.615 3.32 2.67 38.44 2.66
4896 5317 6.918892 AAACAAATGTTGGCCTAAACTTTC 57.081 33.333 3.32 0.00 38.44 2.62
4897 5318 5.606348 ACAAATGTTGGCCTAAACTTTCA 57.394 34.783 3.32 0.00 34.12 2.69
4898 5319 6.173427 ACAAATGTTGGCCTAAACTTTCAT 57.827 33.333 3.32 0.00 34.12 2.57
4899 5320 5.990996 ACAAATGTTGGCCTAAACTTTCATG 59.009 36.000 3.32 4.79 34.12 3.07
4900 5321 4.806640 ATGTTGGCCTAAACTTTCATGG 57.193 40.909 3.32 0.00 0.00 3.66
4901 5322 3.571590 TGTTGGCCTAAACTTTCATGGT 58.428 40.909 3.32 0.00 0.00 3.55
4902 5323 3.964031 TGTTGGCCTAAACTTTCATGGTT 59.036 39.130 3.32 0.00 0.00 3.67
4903 5324 4.202202 TGTTGGCCTAAACTTTCATGGTTG 60.202 41.667 3.32 0.00 0.00 3.77
4904 5325 3.838565 TGGCCTAAACTTTCATGGTTGA 58.161 40.909 3.32 0.00 0.00 3.18
4905 5326 4.415596 TGGCCTAAACTTTCATGGTTGAT 58.584 39.130 3.32 0.00 0.00 2.57
4906 5327 4.462483 TGGCCTAAACTTTCATGGTTGATC 59.538 41.667 3.32 0.00 0.00 2.92
4907 5328 4.142160 GGCCTAAACTTTCATGGTTGATCC 60.142 45.833 0.00 0.00 0.00 3.36
4908 5329 4.142160 GCCTAAACTTTCATGGTTGATCCC 60.142 45.833 0.00 0.00 34.77 3.85
4909 5330 5.016173 CCTAAACTTTCATGGTTGATCCCA 58.984 41.667 0.00 0.00 39.27 4.37
4910 5331 5.480073 CCTAAACTTTCATGGTTGATCCCAA 59.520 40.000 0.00 0.00 38.20 4.12
4911 5332 5.885449 AAACTTTCATGGTTGATCCCAAA 57.115 34.783 0.00 0.00 38.20 3.28
4912 5333 5.885449 AACTTTCATGGTTGATCCCAAAA 57.115 34.783 0.00 0.00 38.20 2.44
4913 5334 5.473066 ACTTTCATGGTTGATCCCAAAAG 57.527 39.130 10.99 10.99 38.20 2.27
4914 5335 4.284234 ACTTTCATGGTTGATCCCAAAAGG 59.716 41.667 14.58 7.83 38.20 3.11
4915 5336 2.818921 TCATGGTTGATCCCAAAAGGG 58.181 47.619 0.00 0.00 38.20 3.95
4916 5337 2.111613 TCATGGTTGATCCCAAAAGGGT 59.888 45.455 0.00 0.00 38.20 4.34
4921 5342 2.781911 GATCCCAAAAGGGTCGCTC 58.218 57.895 0.00 0.00 35.53 5.03
4922 5343 0.748367 GATCCCAAAAGGGTCGCTCC 60.748 60.000 0.00 0.00 35.53 4.70
4923 5344 1.497309 ATCCCAAAAGGGTCGCTCCA 61.497 55.000 0.00 0.00 38.11 3.86
4924 5345 1.675641 CCCAAAAGGGTCGCTCCAG 60.676 63.158 0.00 0.00 38.11 3.86
4925 5346 1.374947 CCAAAAGGGTCGCTCCAGA 59.625 57.895 0.00 0.00 38.11 3.86
4926 5347 0.035056 CCAAAAGGGTCGCTCCAGAT 60.035 55.000 0.00 0.00 38.11 2.90
4927 5348 1.089920 CAAAAGGGTCGCTCCAGATG 58.910 55.000 0.00 0.00 38.11 2.90
4928 5349 0.984230 AAAAGGGTCGCTCCAGATGA 59.016 50.000 0.00 0.00 38.11 2.92
4929 5350 0.984230 AAAGGGTCGCTCCAGATGAA 59.016 50.000 0.00 0.00 38.11 2.57
4930 5351 1.207791 AAGGGTCGCTCCAGATGAAT 58.792 50.000 0.00 0.00 38.11 2.57
4931 5352 1.207791 AGGGTCGCTCCAGATGAATT 58.792 50.000 0.00 0.00 38.11 2.17
4932 5353 1.134280 AGGGTCGCTCCAGATGAATTG 60.134 52.381 0.00 0.00 38.11 2.32
4933 5354 0.659957 GGTCGCTCCAGATGAATTGC 59.340 55.000 0.00 0.00 35.97 3.56
4934 5355 1.661341 GTCGCTCCAGATGAATTGCT 58.339 50.000 0.00 0.00 0.00 3.91
4935 5356 1.596727 GTCGCTCCAGATGAATTGCTC 59.403 52.381 0.00 0.00 0.00 4.26
4936 5357 0.942962 CGCTCCAGATGAATTGCTCC 59.057 55.000 0.00 0.00 0.00 4.70
4937 5358 1.474677 CGCTCCAGATGAATTGCTCCT 60.475 52.381 0.00 0.00 0.00 3.69
4938 5359 1.948145 GCTCCAGATGAATTGCTCCTG 59.052 52.381 0.00 0.00 0.00 3.86
4939 5360 1.948145 CTCCAGATGAATTGCTCCTGC 59.052 52.381 0.00 0.00 40.20 4.85
4940 5361 1.562942 TCCAGATGAATTGCTCCTGCT 59.437 47.619 0.00 0.00 40.48 4.24
4941 5362 2.025605 TCCAGATGAATTGCTCCTGCTT 60.026 45.455 0.00 0.00 40.48 3.91
4942 5363 2.099263 CCAGATGAATTGCTCCTGCTTG 59.901 50.000 0.00 0.00 40.48 4.01
4943 5364 3.014623 CAGATGAATTGCTCCTGCTTGA 58.985 45.455 0.00 0.00 40.48 3.02
4944 5365 3.015327 AGATGAATTGCTCCTGCTTGAC 58.985 45.455 0.00 0.00 40.48 3.18
4945 5366 1.159285 TGAATTGCTCCTGCTTGACG 58.841 50.000 0.00 0.00 40.48 4.35
4946 5367 1.160137 GAATTGCTCCTGCTTGACGT 58.840 50.000 0.00 0.00 40.48 4.34
4947 5368 1.129437 GAATTGCTCCTGCTTGACGTC 59.871 52.381 9.11 9.11 40.48 4.34
4948 5369 0.035317 ATTGCTCCTGCTTGACGTCA 59.965 50.000 15.76 15.76 40.48 4.35
4949 5370 0.179059 TTGCTCCTGCTTGACGTCAA 60.179 50.000 28.07 28.07 40.48 3.18
4950 5371 0.179059 TGCTCCTGCTTGACGTCAAA 60.179 50.000 29.32 16.34 40.48 2.69
4951 5372 0.514691 GCTCCTGCTTGACGTCAAAG 59.485 55.000 29.32 23.70 35.15 2.77
4952 5373 0.514691 CTCCTGCTTGACGTCAAAGC 59.485 55.000 29.32 29.53 35.15 3.51
4953 5374 0.106708 TCCTGCTTGACGTCAAAGCT 59.893 50.000 32.72 0.00 35.15 3.74
4954 5375 0.514691 CCTGCTTGACGTCAAAGCTC 59.485 55.000 32.72 22.83 35.15 4.09
4955 5376 0.162507 CTGCTTGACGTCAAAGCTCG 59.837 55.000 32.72 25.13 35.15 5.03
4956 5377 0.249280 TGCTTGACGTCAAAGCTCGA 60.249 50.000 32.72 20.87 35.15 4.04
4957 5378 1.071605 GCTTGACGTCAAAGCTCGAT 58.928 50.000 29.32 0.00 35.15 3.59
4958 5379 1.201855 GCTTGACGTCAAAGCTCGATG 60.202 52.381 29.32 16.99 35.15 3.84
4959 5380 1.391485 CTTGACGTCAAAGCTCGATGG 59.609 52.381 29.32 12.43 35.15 3.51
4960 5381 1.014044 TGACGTCAAAGCTCGATGGC 61.014 55.000 17.62 7.13 0.00 4.40
4961 5382 1.005037 ACGTCAAAGCTCGATGGCA 60.005 52.632 9.45 0.00 34.17 4.92
4962 5383 0.391661 ACGTCAAAGCTCGATGGCAT 60.392 50.000 0.00 0.00 34.17 4.40
4963 5384 0.027194 CGTCAAAGCTCGATGGCATG 59.973 55.000 3.81 0.00 34.17 4.06
4964 5385 1.089920 GTCAAAGCTCGATGGCATGT 58.910 50.000 3.81 0.00 34.17 3.21
4965 5386 1.470098 GTCAAAGCTCGATGGCATGTT 59.530 47.619 3.81 0.00 34.17 2.71
4966 5387 1.739466 TCAAAGCTCGATGGCATGTTC 59.261 47.619 3.81 0.00 34.17 3.18
4967 5388 1.469703 CAAAGCTCGATGGCATGTTCA 59.530 47.619 3.81 0.00 34.17 3.18
4968 5389 1.825090 AAGCTCGATGGCATGTTCAA 58.175 45.000 3.81 0.00 34.17 2.69
4969 5390 2.048444 AGCTCGATGGCATGTTCAAT 57.952 45.000 3.81 0.00 34.17 2.57
4970 5391 1.674441 AGCTCGATGGCATGTTCAATG 59.326 47.619 3.81 0.00 34.17 2.82
4971 5392 1.268896 GCTCGATGGCATGTTCAATGG 60.269 52.381 3.81 0.00 0.00 3.16
4972 5393 0.740149 TCGATGGCATGTTCAATGGC 59.260 50.000 3.81 5.04 43.83 4.40
4973 5394 0.249155 CGATGGCATGTTCAATGGCC 60.249 55.000 3.81 0.00 46.58 5.36
4974 5395 1.117150 GATGGCATGTTCAATGGCCT 58.883 50.000 3.81 0.00 46.53 5.19
4975 5396 1.483415 GATGGCATGTTCAATGGCCTT 59.517 47.619 3.81 0.00 46.53 4.35
4976 5397 0.609151 TGGCATGTTCAATGGCCTTG 59.391 50.000 3.32 6.44 46.53 3.61
4977 5398 0.896923 GGCATGTTCAATGGCCTTGA 59.103 50.000 3.32 8.94 43.09 3.02
4978 5399 1.483415 GGCATGTTCAATGGCCTTGAT 59.517 47.619 15.50 2.33 43.30 2.57
4979 5400 2.546778 GCATGTTCAATGGCCTTGATG 58.453 47.619 15.50 12.66 43.30 3.07
4980 5401 2.166870 GCATGTTCAATGGCCTTGATGA 59.833 45.455 15.50 7.21 43.30 2.92
4981 5402 3.181469 GCATGTTCAATGGCCTTGATGAT 60.181 43.478 15.50 9.51 43.30 2.45
4982 5403 4.368315 CATGTTCAATGGCCTTGATGATG 58.632 43.478 15.50 15.14 43.30 3.07
4983 5404 3.433343 TGTTCAATGGCCTTGATGATGT 58.567 40.909 15.50 0.00 43.30 3.06
4984 5405 3.444742 TGTTCAATGGCCTTGATGATGTC 59.555 43.478 15.50 5.38 43.30 3.06
4985 5406 2.658285 TCAATGGCCTTGATGATGTCC 58.342 47.619 3.32 0.00 38.97 4.02
4986 5407 2.242965 TCAATGGCCTTGATGATGTCCT 59.757 45.455 3.32 0.00 38.97 3.85
4987 5408 2.359981 ATGGCCTTGATGATGTCCTG 57.640 50.000 3.32 0.00 0.00 3.86
4988 5409 0.394762 TGGCCTTGATGATGTCCTGC 60.395 55.000 3.32 0.00 0.00 4.85
4989 5410 1.442526 GGCCTTGATGATGTCCTGCG 61.443 60.000 0.00 0.00 0.00 5.18
4990 5411 2.020131 CCTTGATGATGTCCTGCGC 58.980 57.895 0.00 0.00 0.00 6.09
4991 5412 0.463295 CCTTGATGATGTCCTGCGCT 60.463 55.000 9.73 0.00 0.00 5.92
4992 5413 0.656259 CTTGATGATGTCCTGCGCTG 59.344 55.000 9.73 8.47 0.00 5.18
4993 5414 0.249955 TTGATGATGTCCTGCGCTGA 59.750 50.000 16.65 5.94 0.00 4.26
4994 5415 0.249955 TGATGATGTCCTGCGCTGAA 59.750 50.000 16.65 0.00 0.00 3.02
4995 5416 0.935898 GATGATGTCCTGCGCTGAAG 59.064 55.000 16.65 0.26 0.00 3.02
4996 5417 1.094073 ATGATGTCCTGCGCTGAAGC 61.094 55.000 16.65 4.52 37.78 3.86
4997 5418 1.449246 GATGTCCTGCGCTGAAGCT 60.449 57.895 16.65 0.00 39.32 3.74
4998 5419 1.703438 GATGTCCTGCGCTGAAGCTG 61.703 60.000 16.65 0.00 39.32 4.24
4999 5420 2.358003 GTCCTGCGCTGAAGCTGT 60.358 61.111 16.65 0.00 39.32 4.40
5000 5421 2.047844 TCCTGCGCTGAAGCTGTC 60.048 61.111 16.65 0.00 39.32 3.51
5001 5422 2.047465 CCTGCGCTGAAGCTGTCT 60.047 61.111 16.65 0.00 39.32 3.41
5002 5423 1.670406 CCTGCGCTGAAGCTGTCTT 60.670 57.895 16.65 0.00 39.32 3.01
5003 5424 1.233285 CCTGCGCTGAAGCTGTCTTT 61.233 55.000 16.65 0.00 39.32 2.52
5004 5425 0.165511 CTGCGCTGAAGCTGTCTTTC 59.834 55.000 9.73 0.00 39.32 2.62
5005 5426 1.230635 TGCGCTGAAGCTGTCTTTCC 61.231 55.000 9.73 0.00 39.32 3.13
5006 5427 0.952984 GCGCTGAAGCTGTCTTTCCT 60.953 55.000 0.00 0.00 39.32 3.36
5007 5428 1.517242 CGCTGAAGCTGTCTTTCCTT 58.483 50.000 0.10 0.00 39.32 3.36
5008 5429 1.876156 CGCTGAAGCTGTCTTTCCTTT 59.124 47.619 0.10 0.00 39.32 3.11
5009 5430 2.350197 CGCTGAAGCTGTCTTTCCTTTG 60.350 50.000 0.10 0.00 39.32 2.77
5010 5431 2.880890 GCTGAAGCTGTCTTTCCTTTGA 59.119 45.455 0.00 0.00 38.21 2.69
5011 5432 3.316308 GCTGAAGCTGTCTTTCCTTTGAA 59.684 43.478 0.00 0.00 38.21 2.69
5012 5433 4.791088 GCTGAAGCTGTCTTTCCTTTGAAC 60.791 45.833 0.00 0.00 38.21 3.18
5013 5434 4.269183 TGAAGCTGTCTTTCCTTTGAACA 58.731 39.130 0.00 0.00 31.48 3.18
5014 5435 4.096382 TGAAGCTGTCTTTCCTTTGAACAC 59.904 41.667 0.00 0.00 31.48 3.32
5015 5436 3.620488 AGCTGTCTTTCCTTTGAACACA 58.380 40.909 0.00 0.00 0.00 3.72
5016 5437 3.378427 AGCTGTCTTTCCTTTGAACACAC 59.622 43.478 0.00 0.00 0.00 3.82
5017 5438 3.128589 GCTGTCTTTCCTTTGAACACACA 59.871 43.478 0.00 0.00 0.00 3.72
5018 5439 4.662145 CTGTCTTTCCTTTGAACACACAC 58.338 43.478 0.00 0.00 0.00 3.82
5019 5440 3.442273 TGTCTTTCCTTTGAACACACACC 59.558 43.478 0.00 0.00 0.00 4.16
5020 5441 3.694566 GTCTTTCCTTTGAACACACACCT 59.305 43.478 0.00 0.00 0.00 4.00
5021 5442 4.879545 GTCTTTCCTTTGAACACACACCTA 59.120 41.667 0.00 0.00 0.00 3.08
5022 5443 5.531287 GTCTTTCCTTTGAACACACACCTAT 59.469 40.000 0.00 0.00 0.00 2.57
5023 5444 6.039382 GTCTTTCCTTTGAACACACACCTATT 59.961 38.462 0.00 0.00 0.00 1.73
5024 5445 6.262273 TCTTTCCTTTGAACACACACCTATTC 59.738 38.462 0.00 0.00 0.00 1.75
5025 5446 4.394729 TCCTTTGAACACACACCTATTCC 58.605 43.478 0.00 0.00 0.00 3.01
5026 5447 4.104102 TCCTTTGAACACACACCTATTCCT 59.896 41.667 0.00 0.00 0.00 3.36
5027 5448 4.827284 CCTTTGAACACACACCTATTCCTT 59.173 41.667 0.00 0.00 0.00 3.36
5028 5449 5.301805 CCTTTGAACACACACCTATTCCTTT 59.698 40.000 0.00 0.00 0.00 3.11
5029 5450 6.385649 TTTGAACACACACCTATTCCTTTC 57.614 37.500 0.00 0.00 0.00 2.62
5030 5451 5.304686 TGAACACACACCTATTCCTTTCT 57.695 39.130 0.00 0.00 0.00 2.52
5031 5452 5.690865 TGAACACACACCTATTCCTTTCTT 58.309 37.500 0.00 0.00 0.00 2.52
5032 5453 5.530915 TGAACACACACCTATTCCTTTCTTG 59.469 40.000 0.00 0.00 0.00 3.02
5033 5454 3.821033 ACACACACCTATTCCTTTCTTGC 59.179 43.478 0.00 0.00 0.00 4.01
5034 5455 3.191371 CACACACCTATTCCTTTCTTGCC 59.809 47.826 0.00 0.00 0.00 4.52
5035 5456 3.181434 ACACACCTATTCCTTTCTTGCCA 60.181 43.478 0.00 0.00 0.00 4.92
5036 5457 3.441572 CACACCTATTCCTTTCTTGCCAG 59.558 47.826 0.00 0.00 0.00 4.85
5037 5458 3.330701 ACACCTATTCCTTTCTTGCCAGA 59.669 43.478 0.00 0.00 0.00 3.86
5038 5459 4.018050 ACACCTATTCCTTTCTTGCCAGAT 60.018 41.667 0.00 0.00 0.00 2.90
5039 5460 4.952335 CACCTATTCCTTTCTTGCCAGATT 59.048 41.667 0.00 0.00 0.00 2.40
5040 5461 5.420104 CACCTATTCCTTTCTTGCCAGATTT 59.580 40.000 0.00 0.00 0.00 2.17
5041 5462 5.654209 ACCTATTCCTTTCTTGCCAGATTTC 59.346 40.000 0.00 0.00 0.00 2.17
5042 5463 5.068329 CCTATTCCTTTCTTGCCAGATTTCC 59.932 44.000 0.00 0.00 0.00 3.13
5043 5464 2.807676 TCCTTTCTTGCCAGATTTCCC 58.192 47.619 0.00 0.00 0.00 3.97
5044 5465 2.109834 TCCTTTCTTGCCAGATTTCCCA 59.890 45.455 0.00 0.00 0.00 4.37
5045 5466 2.494870 CCTTTCTTGCCAGATTTCCCAG 59.505 50.000 0.00 0.00 0.00 4.45
5046 5467 1.549203 TTCTTGCCAGATTTCCCAGC 58.451 50.000 0.00 0.00 0.00 4.85
5047 5468 0.405198 TCTTGCCAGATTTCCCAGCA 59.595 50.000 0.00 0.00 0.00 4.41
5048 5469 1.203038 TCTTGCCAGATTTCCCAGCAA 60.203 47.619 0.00 0.00 40.89 3.91
5049 5470 1.259609 TTGCCAGATTTCCCAGCAAG 58.740 50.000 0.00 0.00 38.45 4.01
5050 5471 0.112995 TGCCAGATTTCCCAGCAAGT 59.887 50.000 0.00 0.00 0.00 3.16
5051 5472 1.260544 GCCAGATTTCCCAGCAAGTT 58.739 50.000 0.00 0.00 0.00 2.66
5052 5473 2.224992 TGCCAGATTTCCCAGCAAGTTA 60.225 45.455 0.00 0.00 0.00 2.24
5053 5474 2.825532 GCCAGATTTCCCAGCAAGTTAA 59.174 45.455 0.00 0.00 0.00 2.01
5054 5475 3.367395 GCCAGATTTCCCAGCAAGTTAAC 60.367 47.826 0.00 0.00 0.00 2.01
5055 5476 3.826157 CCAGATTTCCCAGCAAGTTAACA 59.174 43.478 8.61 0.00 0.00 2.41
5056 5477 4.082571 CCAGATTTCCCAGCAAGTTAACAG 60.083 45.833 8.61 0.88 0.00 3.16
5057 5478 3.507622 AGATTTCCCAGCAAGTTAACAGC 59.492 43.478 8.61 11.37 0.00 4.40
5058 5479 2.356665 TTCCCAGCAAGTTAACAGCA 57.643 45.000 20.55 2.36 0.00 4.41
5059 5480 2.584835 TCCCAGCAAGTTAACAGCAT 57.415 45.000 20.55 7.26 0.00 3.79
5060 5481 2.161855 TCCCAGCAAGTTAACAGCATG 58.838 47.619 20.55 15.60 46.00 4.06
5061 5482 1.203052 CCCAGCAAGTTAACAGCATGG 59.797 52.381 20.55 20.88 43.62 3.66
5062 5483 1.888512 CCAGCAAGTTAACAGCATGGT 59.111 47.619 20.55 11.14 43.62 3.55
5063 5484 2.352030 CCAGCAAGTTAACAGCATGGTG 60.352 50.000 22.91 22.91 35.42 4.17
5064 5485 1.888512 AGCAAGTTAACAGCATGGTGG 59.111 47.619 27.32 9.90 35.42 4.61
5065 5486 1.669795 GCAAGTTAACAGCATGGTGGC 60.670 52.381 27.32 15.61 35.42 5.01
5066 5487 0.881118 AAGTTAACAGCATGGTGGCG 59.119 50.000 27.32 4.50 35.42 5.69
5067 5488 0.250727 AGTTAACAGCATGGTGGCGT 60.251 50.000 27.32 14.99 35.42 5.68
5068 5489 0.596082 GTTAACAGCATGGTGGCGTT 59.404 50.000 27.32 15.62 35.42 4.84
5069 5490 0.595588 TTAACAGCATGGTGGCGTTG 59.404 50.000 27.32 2.97 35.42 4.10
5070 5491 1.861542 TAACAGCATGGTGGCGTTGC 61.862 55.000 27.32 0.00 35.42 4.17
5072 5493 3.367743 AGCATGGTGGCGTTGCTG 61.368 61.111 0.00 0.00 44.63 4.41
5073 5494 4.424566 GCATGGTGGCGTTGCTGG 62.425 66.667 0.00 0.00 33.61 4.85
5074 5495 4.424566 CATGGTGGCGTTGCTGGC 62.425 66.667 0.00 0.00 0.00 4.85
5080 5501 4.362476 GGCGTTGCTGGCCCTTTG 62.362 66.667 0.00 0.00 44.97 2.77
5081 5502 3.605664 GCGTTGCTGGCCCTTTGT 61.606 61.111 0.00 0.00 0.00 2.83
5082 5503 3.128375 CGTTGCTGGCCCTTTGTT 58.872 55.556 0.00 0.00 0.00 2.83
5083 5504 1.300080 CGTTGCTGGCCCTTTGTTG 60.300 57.895 0.00 0.00 0.00 3.33
5084 5505 1.822615 GTTGCTGGCCCTTTGTTGT 59.177 52.632 0.00 0.00 0.00 3.32
5085 5506 0.530431 GTTGCTGGCCCTTTGTTGTG 60.530 55.000 0.00 0.00 0.00 3.33
5086 5507 2.029518 GCTGGCCCTTTGTTGTGC 59.970 61.111 0.00 0.00 0.00 4.57
5087 5508 2.501602 GCTGGCCCTTTGTTGTGCT 61.502 57.895 0.00 0.00 0.00 4.40
5088 5509 1.364901 CTGGCCCTTTGTTGTGCTG 59.635 57.895 0.00 0.00 0.00 4.41
5089 5510 2.091102 CTGGCCCTTTGTTGTGCTGG 62.091 60.000 0.00 0.00 0.00 4.85
5090 5511 2.029518 GCCCTTTGTTGTGCTGGC 59.970 61.111 0.00 0.00 0.00 4.85
5091 5512 2.736531 CCCTTTGTTGTGCTGGCC 59.263 61.111 0.00 0.00 0.00 5.36
5092 5513 2.336088 CCTTTGTTGTGCTGGCCG 59.664 61.111 0.00 0.00 0.00 6.13
5093 5514 2.336088 CTTTGTTGTGCTGGCCGG 59.664 61.111 7.41 7.41 0.00 6.13
5094 5515 3.211564 CTTTGTTGTGCTGGCCGGG 62.212 63.158 15.02 1.86 0.00 5.73
5095 5516 4.514585 TTGTTGTGCTGGCCGGGT 62.515 61.111 15.02 0.00 0.00 5.28
5096 5517 2.626255 TTTGTTGTGCTGGCCGGGTA 62.626 55.000 15.02 0.00 0.00 3.69
5097 5518 2.045340 GTTGTGCTGGCCGGGTAT 60.045 61.111 15.02 0.00 0.00 2.73
5098 5519 1.677633 GTTGTGCTGGCCGGGTATT 60.678 57.895 15.02 0.00 0.00 1.89
5099 5520 1.075836 TTGTGCTGGCCGGGTATTT 59.924 52.632 15.02 0.00 0.00 1.40
5100 5521 1.247419 TTGTGCTGGCCGGGTATTTG 61.247 55.000 15.02 0.00 0.00 2.32
5101 5522 2.753849 TGCTGGCCGGGTATTTGC 60.754 61.111 15.02 0.42 0.00 3.68
5102 5523 2.753849 GCTGGCCGGGTATTTGCA 60.754 61.111 15.02 0.00 0.00 4.08
5103 5524 2.774799 GCTGGCCGGGTATTTGCAG 61.775 63.158 15.02 0.00 0.00 4.41
5104 5525 2.753849 TGGCCGGGTATTTGCAGC 60.754 61.111 2.18 0.00 0.00 5.25
5105 5526 3.527427 GGCCGGGTATTTGCAGCC 61.527 66.667 2.18 0.00 0.00 4.85
5106 5527 2.753849 GCCGGGTATTTGCAGCCA 60.754 61.111 2.18 0.00 35.75 4.75
5107 5528 2.127232 GCCGGGTATTTGCAGCCAT 61.127 57.895 2.18 0.00 35.75 4.40
5108 5529 2.032981 CCGGGTATTTGCAGCCATC 58.967 57.895 0.00 0.00 35.75 3.51
5109 5530 1.455383 CCGGGTATTTGCAGCCATCC 61.455 60.000 0.00 0.00 35.75 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 21 2.508663 GGACGGGCACGAAGCTAC 60.509 66.667 19.19 0.00 44.60 3.58
251 272 1.540580 GGGAGGGTTCGATCGGATTTC 60.541 57.143 16.41 5.79 0.00 2.17
267 288 4.548513 CTCGAGGGGGAGGGGGAG 62.549 77.778 3.91 0.00 0.00 4.30
269 290 3.851184 ATCTCGAGGGGGAGGGGG 61.851 72.222 13.56 0.00 34.74 5.40
270 291 2.525381 CATCTCGAGGGGGAGGGG 60.525 72.222 13.56 0.00 34.74 4.79
271 292 2.525381 CCATCTCGAGGGGGAGGG 60.525 72.222 13.56 0.00 34.74 4.30
272 293 3.237741 GCCATCTCGAGGGGGAGG 61.238 72.222 22.43 13.89 34.74 4.30
305 326 0.331954 AAGGAGGCCAGAGACGACTA 59.668 55.000 5.01 0.00 0.00 2.59
383 404 1.902432 CGACTAGGGTCCGGGGATC 60.902 68.421 0.00 0.00 39.15 3.36
384 405 1.727215 ATCGACTAGGGTCCGGGGAT 61.727 60.000 0.00 0.00 39.15 3.85
385 406 1.941403 AATCGACTAGGGTCCGGGGA 61.941 60.000 0.00 0.00 39.15 4.81
411 433 2.884179 TAGGTTAGGTGGCCCCCGAG 62.884 65.000 0.00 0.00 0.00 4.63
478 500 1.812686 TTTCCACCGTACAGCGAGCT 61.813 55.000 0.00 0.00 44.77 4.09
515 538 0.470341 GCATCTAGGGGACAAGGGAC 59.530 60.000 0.00 0.00 0.00 4.46
534 570 1.197430 AACTCCAGGAGCAGACCCAG 61.197 60.000 17.31 0.00 32.04 4.45
536 572 0.827368 CTAACTCCAGGAGCAGACCC 59.173 60.000 17.31 0.00 32.04 4.46
853 929 6.352516 AGAATAAGCAGTACAAGCTAGCATT 58.647 36.000 18.83 5.54 42.53 3.56
894 970 8.857694 AAGTCGTCTCCTGGAAAAATAAATAA 57.142 30.769 0.00 0.00 0.00 1.40
896 972 9.462606 AATAAGTCGTCTCCTGGAAAAATAAAT 57.537 29.630 0.00 0.00 0.00 1.40
897 973 8.857694 AATAAGTCGTCTCCTGGAAAAATAAA 57.142 30.769 0.00 0.00 0.00 1.40
898 974 8.319146 AGAATAAGTCGTCTCCTGGAAAAATAA 58.681 33.333 0.00 0.00 0.00 1.40
899 975 7.848128 AGAATAAGTCGTCTCCTGGAAAAATA 58.152 34.615 0.00 0.00 0.00 1.40
900 976 6.712276 AGAATAAGTCGTCTCCTGGAAAAAT 58.288 36.000 0.00 0.00 0.00 1.82
901 977 6.110411 AGAATAAGTCGTCTCCTGGAAAAA 57.890 37.500 0.00 0.00 0.00 1.94
902 978 5.740290 AGAATAAGTCGTCTCCTGGAAAA 57.260 39.130 0.00 0.00 0.00 2.29
903 979 5.740290 AAGAATAAGTCGTCTCCTGGAAA 57.260 39.130 0.00 0.00 0.00 3.13
904 980 6.845758 TTAAGAATAAGTCGTCTCCTGGAA 57.154 37.500 0.00 0.00 0.00 3.53
905 981 6.845758 TTTAAGAATAAGTCGTCTCCTGGA 57.154 37.500 0.00 0.00 0.00 3.86
906 982 9.413048 GATATTTAAGAATAAGTCGTCTCCTGG 57.587 37.037 0.00 0.00 31.82 4.45
907 983 9.967346 TGATATTTAAGAATAAGTCGTCTCCTG 57.033 33.333 0.00 0.00 31.82 3.86
936 1012 9.341899 CGTCTCCTGGAAAAATAAATAAACAAG 57.658 33.333 0.00 0.00 0.00 3.16
938 1014 8.508875 GTCGTCTCCTGGAAAAATAAATAAACA 58.491 33.333 0.00 0.00 0.00 2.83
939 1015 8.727910 AGTCGTCTCCTGGAAAAATAAATAAAC 58.272 33.333 0.00 0.00 0.00 2.01
940 1016 8.857694 AGTCGTCTCCTGGAAAAATAAATAAA 57.142 30.769 0.00 0.00 0.00 1.40
1119 1205 5.838521 AGAAAAGGCCAAGAAAATAGTGGAA 59.161 36.000 5.01 0.00 34.05 3.53
1161 1247 9.618890 TCCTACAGAGAAATATCCAAATTTCAG 57.381 33.333 10.86 4.38 44.70 3.02
1378 1485 3.751518 ACGAATTACCAAGCCAGAGTTT 58.248 40.909 0.00 0.00 0.00 2.66
1397 1504 8.395633 CACCCTAAATGTATAAAAAGGAAGACG 58.604 37.037 0.00 0.00 0.00 4.18
1416 1525 2.992847 TCAGAGACAGACCACCCTAA 57.007 50.000 0.00 0.00 0.00 2.69
1462 1571 5.063186 CAGAGAACACTGCAGAATACATGAC 59.937 44.000 23.35 7.08 0.00 3.06
1555 1666 3.152341 CCACAGCCTGAAAATGAGAACT 58.848 45.455 0.00 0.00 0.00 3.01
1840 1960 9.030452 ACTATCATGTAAAATGTTTAGGGCAAA 57.970 29.630 0.00 0.00 0.00 3.68
2467 2751 6.141790 AGGACTTATATTTAGGAACGGAGGT 58.858 40.000 0.00 0.00 0.00 3.85
2490 2774 8.260818 TGGTAGTCCATTTGAAATCTCTAGAAG 58.739 37.037 0.00 0.00 39.03 2.85
2500 2784 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
2566 2850 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2600 2884 4.324267 CCTCCGTTCCTAAATGTTTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
2658 2942 3.169908 AGGAACAACAAAACACCACCTT 58.830 40.909 0.00 0.00 0.00 3.50
3205 3496 2.246849 AGGGGAGAAGTAGATACGGGTT 59.753 50.000 0.00 0.00 0.00 4.11
3207 3498 2.628657 CAAGGGGAGAAGTAGATACGGG 59.371 54.545 0.00 0.00 0.00 5.28
3261 3552 8.969260 AAAGCTCTCAATGTGATAATGTATCA 57.031 30.769 0.00 0.00 42.56 2.15
3598 3911 6.875948 AATACAGCGGTGATAAATATTGCA 57.124 33.333 23.44 0.00 0.00 4.08
3601 3914 7.228507 TCAGCAAATACAGCGGTGATAAATATT 59.771 33.333 23.44 11.27 37.01 1.28
3606 3919 3.867857 TCAGCAAATACAGCGGTGATAA 58.132 40.909 23.44 6.57 37.01 1.75
3607 3920 3.535280 TCAGCAAATACAGCGGTGATA 57.465 42.857 23.44 10.30 37.01 2.15
3610 3923 1.466360 GCTTCAGCAAATACAGCGGTG 60.466 52.381 14.13 14.13 41.59 4.94
3611 3924 0.804989 GCTTCAGCAAATACAGCGGT 59.195 50.000 0.00 0.00 41.59 5.68
3612 3925 0.099436 GGCTTCAGCAAATACAGCGG 59.901 55.000 0.30 0.00 44.36 5.52
3613 3926 1.089920 AGGCTTCAGCAAATACAGCG 58.910 50.000 0.30 0.00 44.36 5.18
3614 3927 2.086869 TCAGGCTTCAGCAAATACAGC 58.913 47.619 0.30 0.00 44.36 4.40
3615 3928 4.005650 TCTTCAGGCTTCAGCAAATACAG 58.994 43.478 0.30 0.00 44.36 2.74
3616 3929 4.019792 TCTTCAGGCTTCAGCAAATACA 57.980 40.909 0.30 0.00 44.36 2.29
3736 4058 7.731054 ACACCAAAGGATAGCAACATTAAAAA 58.269 30.769 0.00 0.00 0.00 1.94
3789 4111 7.308891 CCAACTTACATACAGTATTGCAACCAA 60.309 37.037 0.00 0.00 35.01 3.67
3842 4180 5.036737 GTGTACACCATAAATTCTGCATGC 58.963 41.667 15.42 11.82 0.00 4.06
3967 4322 1.883021 GGGTGGCTGTGAAATTCCG 59.117 57.895 0.00 0.00 0.00 4.30
4108 4476 1.324005 CGGGACCAGGGTCTCTTCTC 61.324 65.000 15.96 0.00 43.09 2.87
4137 4513 4.928601 TGTATCTCTATTACACCACACGC 58.071 43.478 0.00 0.00 0.00 5.34
4368 4761 3.965379 TGGAGTAATGGCAACGAAGTA 57.035 42.857 0.00 0.00 45.00 2.24
4630 5049 2.299013 GAGCAAAGGGGTAAGTTTTGGG 59.701 50.000 0.00 0.00 33.54 4.12
4657 5078 1.247567 GCTAGTTGGCTCTTTTGGCA 58.752 50.000 0.00 0.00 40.80 4.92
4684 5105 4.202419 GCAAAGGGGAAGTTTTGGGTTTAT 60.202 41.667 0.00 0.00 35.40 1.40
4699 5120 1.066215 GCAAAACTATGGGCAAAGGGG 60.066 52.381 0.00 0.00 0.00 4.79
4700 5121 1.901833 AGCAAAACTATGGGCAAAGGG 59.098 47.619 0.00 0.00 0.00 3.95
4704 5125 1.631405 AGCAGCAAAACTATGGGCAA 58.369 45.000 0.00 0.00 0.00 4.52
4706 5127 2.738314 CAAAAGCAGCAAAACTATGGGC 59.262 45.455 0.00 0.00 0.00 5.36
4707 5128 3.244181 ACCAAAAGCAGCAAAACTATGGG 60.244 43.478 0.00 0.00 30.88 4.00
4708 5129 3.742369 CACCAAAAGCAGCAAAACTATGG 59.258 43.478 0.00 0.00 0.00 2.74
4710 5131 3.640967 TCCACCAAAAGCAGCAAAACTAT 59.359 39.130 0.00 0.00 0.00 2.12
4711 5132 3.027412 TCCACCAAAAGCAGCAAAACTA 58.973 40.909 0.00 0.00 0.00 2.24
4712 5133 1.830477 TCCACCAAAAGCAGCAAAACT 59.170 42.857 0.00 0.00 0.00 2.66
4713 5134 2.307934 TCCACCAAAAGCAGCAAAAC 57.692 45.000 0.00 0.00 0.00 2.43
4714 5135 2.419851 CCTTCCACCAAAAGCAGCAAAA 60.420 45.455 0.00 0.00 0.00 2.44
4715 5136 1.138661 CCTTCCACCAAAAGCAGCAAA 59.861 47.619 0.00 0.00 0.00 3.68
4716 5137 0.752054 CCTTCCACCAAAAGCAGCAA 59.248 50.000 0.00 0.00 0.00 3.91
4717 5138 0.106268 TCCTTCCACCAAAAGCAGCA 60.106 50.000 0.00 0.00 0.00 4.41
4718 5139 1.039856 TTCCTTCCACCAAAAGCAGC 58.960 50.000 0.00 0.00 0.00 5.25
4719 5140 2.031120 TGTTCCTTCCACCAAAAGCAG 58.969 47.619 0.00 0.00 0.00 4.24
4720 5141 2.151502 TGTTCCTTCCACCAAAAGCA 57.848 45.000 0.00 0.00 0.00 3.91
4721 5142 2.430694 ACTTGTTCCTTCCACCAAAAGC 59.569 45.455 0.00 0.00 0.00 3.51
4722 5143 4.441495 GGAACTTGTTCCTTCCACCAAAAG 60.441 45.833 21.47 0.00 36.66 2.27
4723 5144 3.449377 GGAACTTGTTCCTTCCACCAAAA 59.551 43.478 21.47 0.00 36.66 2.44
4724 5145 3.028130 GGAACTTGTTCCTTCCACCAAA 58.972 45.455 21.47 0.00 36.66 3.28
4725 5146 2.024846 TGGAACTTGTTCCTTCCACCAA 60.025 45.455 26.62 7.29 40.89 3.67
4726 5147 1.566703 TGGAACTTGTTCCTTCCACCA 59.433 47.619 26.62 8.46 40.89 4.17
4727 5148 2.158667 TCTGGAACTTGTTCCTTCCACC 60.159 50.000 26.62 6.23 40.89 4.61
4728 5149 3.208747 TCTGGAACTTGTTCCTTCCAC 57.791 47.619 26.62 6.26 40.89 4.02
4729 5150 4.453480 AATCTGGAACTTGTTCCTTCCA 57.547 40.909 26.62 11.58 43.05 3.53
4730 5151 5.073428 AGAAATCTGGAACTTGTTCCTTCC 58.927 41.667 26.62 13.48 41.65 3.46
4731 5152 6.641169 AAGAAATCTGGAACTTGTTCCTTC 57.359 37.500 26.62 21.56 41.65 3.46
4732 5153 7.423844 AAAAGAAATCTGGAACTTGTTCCTT 57.576 32.000 26.62 16.04 41.65 3.36
4733 5154 7.423844 AAAAAGAAATCTGGAACTTGTTCCT 57.576 32.000 26.62 11.34 41.65 3.36
4754 5175 5.705441 AGTATGACGCTGGATCTTTCAAAAA 59.295 36.000 0.00 0.00 0.00 1.94
4755 5176 5.122239 CAGTATGACGCTGGATCTTTCAAAA 59.878 40.000 0.00 0.00 39.69 2.44
4756 5177 4.631377 CAGTATGACGCTGGATCTTTCAAA 59.369 41.667 0.00 0.00 39.69 2.69
4757 5178 4.183865 CAGTATGACGCTGGATCTTTCAA 58.816 43.478 0.00 0.00 39.69 2.69
4758 5179 3.785486 CAGTATGACGCTGGATCTTTCA 58.215 45.455 0.00 0.00 39.69 2.69
4767 5188 2.009051 TGAAATGCCAGTATGACGCTG 58.991 47.619 0.00 0.00 39.69 5.18
4768 5189 2.401583 TGAAATGCCAGTATGACGCT 57.598 45.000 0.00 0.00 39.69 5.07
4769 5190 3.065233 TCAATGAAATGCCAGTATGACGC 59.935 43.478 0.00 0.00 39.69 5.19
4770 5191 4.880886 TCAATGAAATGCCAGTATGACG 57.119 40.909 0.00 0.00 39.69 4.35
4771 5192 6.860023 GCTTATCAATGAAATGCCAGTATGAC 59.140 38.462 0.00 0.00 39.69 3.06
4772 5193 6.546772 TGCTTATCAATGAAATGCCAGTATGA 59.453 34.615 0.00 0.00 39.69 2.15
4773 5194 6.741109 TGCTTATCAATGAAATGCCAGTATG 58.259 36.000 0.00 0.00 0.00 2.39
4774 5195 6.015688 CCTGCTTATCAATGAAATGCCAGTAT 60.016 38.462 0.00 0.00 0.00 2.12
4775 5196 5.300034 CCTGCTTATCAATGAAATGCCAGTA 59.700 40.000 0.00 0.00 0.00 2.74
4776 5197 4.098960 CCTGCTTATCAATGAAATGCCAGT 59.901 41.667 0.00 0.00 0.00 4.00
4777 5198 4.340097 TCCTGCTTATCAATGAAATGCCAG 59.660 41.667 0.00 0.00 0.00 4.85
4778 5199 4.279982 TCCTGCTTATCAATGAAATGCCA 58.720 39.130 0.00 0.00 0.00 4.92
4779 5200 4.924305 TCCTGCTTATCAATGAAATGCC 57.076 40.909 0.00 0.00 0.00 4.40
4780 5201 4.743644 GCTTCCTGCTTATCAATGAAATGC 59.256 41.667 0.00 0.00 38.95 3.56
4781 5202 5.898174 TGCTTCCTGCTTATCAATGAAATG 58.102 37.500 0.00 0.00 43.37 2.32
4782 5203 6.534475 TTGCTTCCTGCTTATCAATGAAAT 57.466 33.333 0.00 0.00 43.37 2.17
4783 5204 5.981088 TTGCTTCCTGCTTATCAATGAAA 57.019 34.783 0.00 0.00 43.37 2.69
4784 5205 5.163488 CCATTGCTTCCTGCTTATCAATGAA 60.163 40.000 12.61 0.00 41.71 2.57
4785 5206 4.340097 CCATTGCTTCCTGCTTATCAATGA 59.660 41.667 12.61 0.00 41.71 2.57
4786 5207 4.340097 TCCATTGCTTCCTGCTTATCAATG 59.660 41.667 0.00 0.00 43.37 2.82
4787 5208 4.539726 TCCATTGCTTCCTGCTTATCAAT 58.460 39.130 0.00 0.00 43.37 2.57
4788 5209 3.949754 CTCCATTGCTTCCTGCTTATCAA 59.050 43.478 0.00 0.00 43.37 2.57
4789 5210 3.200605 TCTCCATTGCTTCCTGCTTATCA 59.799 43.478 0.00 0.00 43.37 2.15
4790 5211 3.813443 TCTCCATTGCTTCCTGCTTATC 58.187 45.455 0.00 0.00 43.37 1.75
4791 5212 3.939740 TCTCCATTGCTTCCTGCTTAT 57.060 42.857 0.00 0.00 43.37 1.73
4792 5213 3.719268 TTCTCCATTGCTTCCTGCTTA 57.281 42.857 0.00 0.00 43.37 3.09
4793 5214 2.592102 TTCTCCATTGCTTCCTGCTT 57.408 45.000 0.00 0.00 43.37 3.91
4794 5215 2.040813 TCTTTCTCCATTGCTTCCTGCT 59.959 45.455 0.00 0.00 43.37 4.24
4795 5216 2.440409 TCTTTCTCCATTGCTTCCTGC 58.560 47.619 0.00 0.00 43.25 4.85
4796 5217 5.188434 TGTATCTTTCTCCATTGCTTCCTG 58.812 41.667 0.00 0.00 0.00 3.86
4797 5218 5.441718 TGTATCTTTCTCCATTGCTTCCT 57.558 39.130 0.00 0.00 0.00 3.36
4798 5219 6.405176 CCTTTGTATCTTTCTCCATTGCTTCC 60.405 42.308 0.00 0.00 0.00 3.46
4799 5220 6.405176 CCCTTTGTATCTTTCTCCATTGCTTC 60.405 42.308 0.00 0.00 0.00 3.86
4800 5221 5.420104 CCCTTTGTATCTTTCTCCATTGCTT 59.580 40.000 0.00 0.00 0.00 3.91
4801 5222 4.952335 CCCTTTGTATCTTTCTCCATTGCT 59.048 41.667 0.00 0.00 0.00 3.91
4802 5223 4.440663 GCCCTTTGTATCTTTCTCCATTGC 60.441 45.833 0.00 0.00 0.00 3.56
4803 5224 4.201950 CGCCCTTTGTATCTTTCTCCATTG 60.202 45.833 0.00 0.00 0.00 2.82
4804 5225 3.947834 CGCCCTTTGTATCTTTCTCCATT 59.052 43.478 0.00 0.00 0.00 3.16
4805 5226 3.199946 TCGCCCTTTGTATCTTTCTCCAT 59.800 43.478 0.00 0.00 0.00 3.41
4806 5227 2.569853 TCGCCCTTTGTATCTTTCTCCA 59.430 45.455 0.00 0.00 0.00 3.86
4807 5228 3.198872 CTCGCCCTTTGTATCTTTCTCC 58.801 50.000 0.00 0.00 0.00 3.71
4808 5229 3.198872 CCTCGCCCTTTGTATCTTTCTC 58.801 50.000 0.00 0.00 0.00 2.87
4809 5230 2.572104 ACCTCGCCCTTTGTATCTTTCT 59.428 45.455 0.00 0.00 0.00 2.52
4810 5231 2.678336 CACCTCGCCCTTTGTATCTTTC 59.322 50.000 0.00 0.00 0.00 2.62
4811 5232 2.711542 CACCTCGCCCTTTGTATCTTT 58.288 47.619 0.00 0.00 0.00 2.52
4812 5233 1.679032 GCACCTCGCCCTTTGTATCTT 60.679 52.381 0.00 0.00 32.94 2.40
4813 5234 0.107654 GCACCTCGCCCTTTGTATCT 60.108 55.000 0.00 0.00 32.94 1.98
4814 5235 0.392461 TGCACCTCGCCCTTTGTATC 60.392 55.000 0.00 0.00 41.33 2.24
4815 5236 0.392998 CTGCACCTCGCCCTTTGTAT 60.393 55.000 0.00 0.00 41.33 2.29
4816 5237 1.003839 CTGCACCTCGCCCTTTGTA 60.004 57.895 0.00 0.00 41.33 2.41
4817 5238 2.281761 CTGCACCTCGCCCTTTGT 60.282 61.111 0.00 0.00 41.33 2.83
4818 5239 3.058160 CCTGCACCTCGCCCTTTG 61.058 66.667 0.00 0.00 41.33 2.77
4819 5240 3.553095 GACCTGCACCTCGCCCTTT 62.553 63.158 0.00 0.00 41.33 3.11
4820 5241 4.021925 GACCTGCACCTCGCCCTT 62.022 66.667 0.00 0.00 41.33 3.95
4823 5244 3.075005 TAGGACCTGCACCTCGCC 61.075 66.667 3.53 0.00 41.33 5.54
4824 5245 2.496817 CTAGGACCTGCACCTCGC 59.503 66.667 3.53 0.00 38.76 5.03
4825 5246 1.379977 TCCTAGGACCTGCACCTCG 60.380 63.158 7.62 0.00 38.76 4.63
4826 5247 2.203806 GTCCTAGGACCTGCACCTC 58.796 63.158 28.87 2.49 39.08 3.85
4827 5248 4.463043 GTCCTAGGACCTGCACCT 57.537 61.111 28.87 0.00 39.08 4.00
4835 5256 4.964593 TGTAACAAAACTGGTCCTAGGAC 58.035 43.478 30.72 30.72 43.87 3.85
4836 5257 5.104444 TGTTGTAACAAAACTGGTCCTAGGA 60.104 40.000 7.62 7.62 35.67 2.94
4837 5258 5.008316 GTGTTGTAACAAAACTGGTCCTAGG 59.992 44.000 0.82 0.82 41.21 3.02
4838 5259 5.820947 AGTGTTGTAACAAAACTGGTCCTAG 59.179 40.000 0.21 0.00 41.21 3.02
4839 5260 5.747342 AGTGTTGTAACAAAACTGGTCCTA 58.253 37.500 0.21 0.00 41.21 2.94
4840 5261 4.595986 AGTGTTGTAACAAAACTGGTCCT 58.404 39.130 0.21 0.00 41.21 3.85
4841 5262 4.976224 AGTGTTGTAACAAAACTGGTCC 57.024 40.909 0.21 0.00 41.21 4.46
4842 5263 8.071967 GGTTATAGTGTTGTAACAAAACTGGTC 58.928 37.037 6.39 0.00 41.21 4.02
4843 5264 7.776500 AGGTTATAGTGTTGTAACAAAACTGGT 59.224 33.333 6.39 0.00 41.21 4.00
4844 5265 8.161699 AGGTTATAGTGTTGTAACAAAACTGG 57.838 34.615 6.39 0.00 41.21 4.00
4845 5266 8.007716 CGAGGTTATAGTGTTGTAACAAAACTG 58.992 37.037 6.39 0.00 41.21 3.16
4846 5267 7.927629 TCGAGGTTATAGTGTTGTAACAAAACT 59.072 33.333 3.79 3.79 41.21 2.66
4847 5268 8.075593 TCGAGGTTATAGTGTTGTAACAAAAC 57.924 34.615 0.00 0.00 41.21 2.43
4848 5269 8.659925 TTCGAGGTTATAGTGTTGTAACAAAA 57.340 30.769 0.00 0.00 41.21 2.44
4849 5270 8.659925 TTTCGAGGTTATAGTGTTGTAACAAA 57.340 30.769 0.00 0.00 41.21 2.83
4850 5271 8.550376 GTTTTCGAGGTTATAGTGTTGTAACAA 58.450 33.333 0.00 0.00 41.21 2.83
4851 5272 7.710044 TGTTTTCGAGGTTATAGTGTTGTAACA 59.290 33.333 0.00 0.00 33.85 2.41
4852 5273 8.075593 TGTTTTCGAGGTTATAGTGTTGTAAC 57.924 34.615 0.00 0.00 32.06 2.50
4853 5274 8.659925 TTGTTTTCGAGGTTATAGTGTTGTAA 57.340 30.769 0.00 0.00 0.00 2.41
4854 5275 8.659925 TTTGTTTTCGAGGTTATAGTGTTGTA 57.340 30.769 0.00 0.00 0.00 2.41
4855 5276 7.556733 TTTGTTTTCGAGGTTATAGTGTTGT 57.443 32.000 0.00 0.00 0.00 3.32
4856 5277 8.073768 ACATTTGTTTTCGAGGTTATAGTGTTG 58.926 33.333 0.00 0.00 0.00 3.33
4857 5278 8.161699 ACATTTGTTTTCGAGGTTATAGTGTT 57.838 30.769 0.00 0.00 0.00 3.32
4858 5279 7.739498 ACATTTGTTTTCGAGGTTATAGTGT 57.261 32.000 0.00 0.00 0.00 3.55
4859 5280 7.537306 CCAACATTTGTTTTCGAGGTTATAGTG 59.463 37.037 0.00 0.00 35.83 2.74
4860 5281 7.590279 CCAACATTTGTTTTCGAGGTTATAGT 58.410 34.615 0.00 0.00 35.83 2.12
4861 5282 6.526674 GCCAACATTTGTTTTCGAGGTTATAG 59.473 38.462 0.00 0.00 35.83 1.31
4862 5283 6.383415 GCCAACATTTGTTTTCGAGGTTATA 58.617 36.000 0.00 0.00 35.83 0.98
4863 5284 5.227152 GCCAACATTTGTTTTCGAGGTTAT 58.773 37.500 0.00 0.00 35.83 1.89
4864 5285 4.500035 GGCCAACATTTGTTTTCGAGGTTA 60.500 41.667 0.00 0.00 35.83 2.85
4865 5286 3.453424 GCCAACATTTGTTTTCGAGGTT 58.547 40.909 0.00 0.00 35.83 3.50
4866 5287 2.223947 GGCCAACATTTGTTTTCGAGGT 60.224 45.455 0.00 0.00 35.83 3.85
4867 5288 2.035832 AGGCCAACATTTGTTTTCGAGG 59.964 45.455 5.01 0.00 35.83 4.63
4868 5289 3.369546 AGGCCAACATTTGTTTTCGAG 57.630 42.857 5.01 0.00 35.83 4.04
4869 5290 4.920640 TTAGGCCAACATTTGTTTTCGA 57.079 36.364 5.01 0.00 35.83 3.71
4870 5291 5.047188 AGTTTAGGCCAACATTTGTTTTCG 58.953 37.500 5.01 0.00 35.83 3.46
4871 5292 6.918892 AAGTTTAGGCCAACATTTGTTTTC 57.081 33.333 5.01 0.00 35.83 2.29
4872 5293 6.881602 TGAAAGTTTAGGCCAACATTTGTTTT 59.118 30.769 5.01 0.00 35.83 2.43
4873 5294 6.410540 TGAAAGTTTAGGCCAACATTTGTTT 58.589 32.000 5.01 0.00 35.83 2.83
4874 5295 5.983540 TGAAAGTTTAGGCCAACATTTGTT 58.016 33.333 5.01 0.00 39.12 2.83
4875 5296 5.606348 TGAAAGTTTAGGCCAACATTTGT 57.394 34.783 5.01 0.00 0.00 2.83
4876 5297 5.409214 CCATGAAAGTTTAGGCCAACATTTG 59.591 40.000 5.01 0.00 0.00 2.32
4877 5298 5.071653 ACCATGAAAGTTTAGGCCAACATTT 59.928 36.000 5.01 4.51 0.00 2.32
4878 5299 4.592778 ACCATGAAAGTTTAGGCCAACATT 59.407 37.500 5.01 0.00 0.00 2.71
4879 5300 4.159557 ACCATGAAAGTTTAGGCCAACAT 58.840 39.130 5.01 0.00 0.00 2.71
4880 5301 3.571590 ACCATGAAAGTTTAGGCCAACA 58.428 40.909 5.01 0.00 0.00 3.33
4881 5302 4.038642 TCAACCATGAAAGTTTAGGCCAAC 59.961 41.667 5.01 0.60 30.99 3.77
4882 5303 4.219115 TCAACCATGAAAGTTTAGGCCAA 58.781 39.130 5.01 0.00 30.99 4.52
4883 5304 3.838565 TCAACCATGAAAGTTTAGGCCA 58.161 40.909 5.01 0.00 30.99 5.36
4884 5305 4.142160 GGATCAACCATGAAAGTTTAGGCC 60.142 45.833 0.00 0.00 39.49 5.19
4885 5306 4.142160 GGGATCAACCATGAAAGTTTAGGC 60.142 45.833 0.00 0.00 39.49 3.93
4886 5307 5.016173 TGGGATCAACCATGAAAGTTTAGG 58.984 41.667 0.00 0.00 39.49 2.69
4887 5308 6.588719 TTGGGATCAACCATGAAAGTTTAG 57.411 37.500 0.00 0.00 40.91 1.85
4888 5309 6.985653 TTTGGGATCAACCATGAAAGTTTA 57.014 33.333 0.00 0.00 40.91 2.01
4889 5310 5.885449 TTTGGGATCAACCATGAAAGTTT 57.115 34.783 0.00 0.00 40.91 2.66
4890 5311 5.221702 CCTTTTGGGATCAACCATGAAAGTT 60.222 40.000 0.00 0.00 40.91 2.66
4891 5312 4.284234 CCTTTTGGGATCAACCATGAAAGT 59.716 41.667 0.00 0.00 40.91 2.66
4892 5313 4.824289 CCTTTTGGGATCAACCATGAAAG 58.176 43.478 0.00 2.19 40.91 2.62
4893 5314 4.888326 CCTTTTGGGATCAACCATGAAA 57.112 40.909 0.00 0.00 40.91 2.69
4907 5328 0.035056 ATCTGGAGCGACCCTTTTGG 60.035 55.000 0.00 0.00 38.00 3.28
4908 5329 1.089920 CATCTGGAGCGACCCTTTTG 58.910 55.000 0.00 0.00 38.00 2.44
4909 5330 0.984230 TCATCTGGAGCGACCCTTTT 59.016 50.000 0.00 0.00 38.00 2.27
4910 5331 0.984230 TTCATCTGGAGCGACCCTTT 59.016 50.000 0.00 0.00 38.00 3.11
4911 5332 1.207791 ATTCATCTGGAGCGACCCTT 58.792 50.000 0.00 0.00 38.00 3.95
4912 5333 1.134280 CAATTCATCTGGAGCGACCCT 60.134 52.381 0.00 0.00 38.00 4.34
4913 5334 1.303309 CAATTCATCTGGAGCGACCC 58.697 55.000 0.00 0.00 38.00 4.46
4914 5335 0.659957 GCAATTCATCTGGAGCGACC 59.340 55.000 0.00 0.00 39.54 4.79
4915 5336 1.596727 GAGCAATTCATCTGGAGCGAC 59.403 52.381 0.00 0.00 0.00 5.19
4916 5337 1.473965 GGAGCAATTCATCTGGAGCGA 60.474 52.381 0.00 0.00 0.00 4.93
4917 5338 0.942962 GGAGCAATTCATCTGGAGCG 59.057 55.000 0.00 0.00 0.00 5.03
4918 5339 1.948145 CAGGAGCAATTCATCTGGAGC 59.052 52.381 0.00 0.00 0.00 4.70
4919 5340 1.948145 GCAGGAGCAATTCATCTGGAG 59.052 52.381 0.00 0.00 41.58 3.86
4920 5341 1.562942 AGCAGGAGCAATTCATCTGGA 59.437 47.619 0.00 0.00 45.49 3.86
4921 5342 2.054232 AGCAGGAGCAATTCATCTGG 57.946 50.000 0.00 0.00 45.49 3.86
4922 5343 3.014623 TCAAGCAGGAGCAATTCATCTG 58.985 45.455 0.00 0.00 45.49 2.90
4923 5344 3.015327 GTCAAGCAGGAGCAATTCATCT 58.985 45.455 0.00 0.00 45.49 2.90
4924 5345 2.223203 CGTCAAGCAGGAGCAATTCATC 60.223 50.000 0.00 0.00 45.49 2.92
4925 5346 1.741706 CGTCAAGCAGGAGCAATTCAT 59.258 47.619 0.00 0.00 45.49 2.57
4926 5347 1.159285 CGTCAAGCAGGAGCAATTCA 58.841 50.000 0.00 0.00 45.49 2.57
4927 5348 1.129437 GACGTCAAGCAGGAGCAATTC 59.871 52.381 11.55 0.00 45.49 2.17
4928 5349 1.160137 GACGTCAAGCAGGAGCAATT 58.840 50.000 11.55 0.00 45.49 2.32
4929 5350 0.035317 TGACGTCAAGCAGGAGCAAT 59.965 50.000 17.62 0.00 45.49 3.56
4930 5351 0.179059 TTGACGTCAAGCAGGAGCAA 60.179 50.000 26.53 0.56 45.49 3.91
4931 5352 0.179059 TTTGACGTCAAGCAGGAGCA 60.179 50.000 28.21 10.72 45.49 4.26
4932 5353 0.514691 CTTTGACGTCAAGCAGGAGC 59.485 55.000 28.21 0.00 37.15 4.70
4933 5354 0.514691 GCTTTGACGTCAAGCAGGAG 59.485 55.000 30.57 25.19 37.15 3.69
4934 5355 0.106708 AGCTTTGACGTCAAGCAGGA 59.893 50.000 33.68 20.93 37.15 3.86
4935 5356 0.514691 GAGCTTTGACGTCAAGCAGG 59.485 55.000 33.68 24.56 37.15 4.85
4936 5357 0.162507 CGAGCTTTGACGTCAAGCAG 59.837 55.000 33.68 28.15 37.15 4.24
4937 5358 0.249280 TCGAGCTTTGACGTCAAGCA 60.249 50.000 33.68 22.04 37.15 3.91
4938 5359 1.071605 ATCGAGCTTTGACGTCAAGC 58.928 50.000 29.42 29.42 37.15 4.01
4939 5360 1.391485 CCATCGAGCTTTGACGTCAAG 59.609 52.381 28.21 22.35 37.15 3.02
4940 5361 1.428448 CCATCGAGCTTTGACGTCAA 58.572 50.000 26.53 26.53 0.00 3.18
4941 5362 1.014044 GCCATCGAGCTTTGACGTCA 61.014 55.000 15.76 15.76 0.00 4.35
4942 5363 1.014044 TGCCATCGAGCTTTGACGTC 61.014 55.000 9.11 9.11 0.00 4.34
4943 5364 0.391661 ATGCCATCGAGCTTTGACGT 60.392 50.000 0.00 0.00 0.00 4.34
4944 5365 0.027194 CATGCCATCGAGCTTTGACG 59.973 55.000 0.00 0.00 0.00 4.35
4945 5366 1.089920 ACATGCCATCGAGCTTTGAC 58.910 50.000 0.00 0.00 0.00 3.18
4946 5367 1.739466 GAACATGCCATCGAGCTTTGA 59.261 47.619 0.00 0.00 0.00 2.69
4947 5368 1.469703 TGAACATGCCATCGAGCTTTG 59.530 47.619 0.00 0.00 0.00 2.77
4948 5369 1.825090 TGAACATGCCATCGAGCTTT 58.175 45.000 0.00 0.00 0.00 3.51
4949 5370 1.825090 TTGAACATGCCATCGAGCTT 58.175 45.000 0.00 0.00 0.00 3.74
4950 5371 1.674441 CATTGAACATGCCATCGAGCT 59.326 47.619 0.00 0.00 0.00 4.09
4951 5372 1.268896 CCATTGAACATGCCATCGAGC 60.269 52.381 0.00 0.00 0.00 5.03
4952 5373 1.268896 GCCATTGAACATGCCATCGAG 60.269 52.381 0.00 0.00 0.00 4.04
4953 5374 0.740149 GCCATTGAACATGCCATCGA 59.260 50.000 0.00 0.00 0.00 3.59
4954 5375 0.249155 GGCCATTGAACATGCCATCG 60.249 55.000 0.00 0.00 43.46 3.84
4955 5376 1.117150 AGGCCATTGAACATGCCATC 58.883 50.000 5.01 0.00 46.45 3.51
4956 5377 1.208535 CAAGGCCATTGAACATGCCAT 59.791 47.619 5.01 0.00 46.45 4.40
4957 5378 0.609151 CAAGGCCATTGAACATGCCA 59.391 50.000 5.01 0.00 46.45 4.92
4958 5379 0.896923 TCAAGGCCATTGAACATGCC 59.103 50.000 5.01 0.00 45.00 4.40
4966 5387 2.361119 CAGGACATCATCAAGGCCATTG 59.639 50.000 5.01 7.08 40.52 2.82
4967 5388 2.662866 CAGGACATCATCAAGGCCATT 58.337 47.619 5.01 0.00 0.00 3.16
4968 5389 1.753141 GCAGGACATCATCAAGGCCAT 60.753 52.381 5.01 0.00 0.00 4.40
4969 5390 0.394762 GCAGGACATCATCAAGGCCA 60.395 55.000 5.01 0.00 0.00 5.36
4970 5391 1.442526 CGCAGGACATCATCAAGGCC 61.443 60.000 0.00 0.00 0.00 5.19
4971 5392 2.020131 CGCAGGACATCATCAAGGC 58.980 57.895 0.00 0.00 0.00 4.35
4972 5393 0.463295 AGCGCAGGACATCATCAAGG 60.463 55.000 11.47 0.00 0.00 3.61
4973 5394 0.656259 CAGCGCAGGACATCATCAAG 59.344 55.000 11.47 0.00 0.00 3.02
4974 5395 0.249955 TCAGCGCAGGACATCATCAA 59.750 50.000 11.47 0.00 0.00 2.57
4975 5396 0.249955 TTCAGCGCAGGACATCATCA 59.750 50.000 11.47 0.00 0.00 3.07
4976 5397 0.935898 CTTCAGCGCAGGACATCATC 59.064 55.000 11.47 0.00 0.00 2.92
4977 5398 1.094073 GCTTCAGCGCAGGACATCAT 61.094 55.000 11.47 0.00 0.00 2.45
4978 5399 1.742880 GCTTCAGCGCAGGACATCA 60.743 57.895 11.47 0.00 0.00 3.07
4979 5400 3.096791 GCTTCAGCGCAGGACATC 58.903 61.111 11.47 0.00 0.00 3.06
4988 5409 7.972111 GTTCAAAGGAAAGACAGCTTCAGCG 62.972 48.000 0.00 0.00 39.53 5.18
4989 5410 2.880890 TCAAAGGAAAGACAGCTTCAGC 59.119 45.455 0.00 0.00 42.49 4.26
4990 5411 4.336433 TGTTCAAAGGAAAGACAGCTTCAG 59.664 41.667 0.00 0.00 34.13 3.02
4991 5412 4.096382 GTGTTCAAAGGAAAGACAGCTTCA 59.904 41.667 0.00 0.00 34.13 3.02
4992 5413 4.096382 TGTGTTCAAAGGAAAGACAGCTTC 59.904 41.667 0.00 0.00 34.13 3.86
4993 5414 4.016444 TGTGTTCAAAGGAAAGACAGCTT 58.984 39.130 0.00 0.00 34.13 3.74
4994 5415 3.378427 GTGTGTTCAAAGGAAAGACAGCT 59.622 43.478 0.00 0.00 34.13 4.24
4995 5416 3.128589 TGTGTGTTCAAAGGAAAGACAGC 59.871 43.478 0.00 0.00 34.13 4.40
4996 5417 4.438744 GGTGTGTGTTCAAAGGAAAGACAG 60.439 45.833 0.00 0.00 34.13 3.51
4997 5418 3.442273 GGTGTGTGTTCAAAGGAAAGACA 59.558 43.478 0.00 0.00 34.13 3.41
4998 5419 3.694566 AGGTGTGTGTTCAAAGGAAAGAC 59.305 43.478 0.00 0.00 34.13 3.01
4999 5420 3.963129 AGGTGTGTGTTCAAAGGAAAGA 58.037 40.909 0.00 0.00 34.13 2.52
5000 5421 6.391227 AATAGGTGTGTGTTCAAAGGAAAG 57.609 37.500 0.00 0.00 34.13 2.62
5001 5422 5.300792 GGAATAGGTGTGTGTTCAAAGGAAA 59.699 40.000 0.00 0.00 34.13 3.13
5002 5423 4.825085 GGAATAGGTGTGTGTTCAAAGGAA 59.175 41.667 0.00 0.00 0.00 3.36
5003 5424 4.104102 AGGAATAGGTGTGTGTTCAAAGGA 59.896 41.667 0.00 0.00 0.00 3.36
5004 5425 4.398319 AGGAATAGGTGTGTGTTCAAAGG 58.602 43.478 0.00 0.00 0.00 3.11
5005 5426 6.263168 AGAAAGGAATAGGTGTGTGTTCAAAG 59.737 38.462 0.00 0.00 0.00 2.77
5006 5427 6.126409 AGAAAGGAATAGGTGTGTGTTCAAA 58.874 36.000 0.00 0.00 0.00 2.69
5007 5428 5.690865 AGAAAGGAATAGGTGTGTGTTCAA 58.309 37.500 0.00 0.00 0.00 2.69
5008 5429 5.304686 AGAAAGGAATAGGTGTGTGTTCA 57.695 39.130 0.00 0.00 0.00 3.18
5009 5430 5.562890 GCAAGAAAGGAATAGGTGTGTGTTC 60.563 44.000 0.00 0.00 0.00 3.18
5010 5431 4.278419 GCAAGAAAGGAATAGGTGTGTGTT 59.722 41.667 0.00 0.00 0.00 3.32
5011 5432 3.821033 GCAAGAAAGGAATAGGTGTGTGT 59.179 43.478 0.00 0.00 0.00 3.72
5012 5433 3.191371 GGCAAGAAAGGAATAGGTGTGTG 59.809 47.826 0.00 0.00 0.00 3.82
5013 5434 3.181434 TGGCAAGAAAGGAATAGGTGTGT 60.181 43.478 0.00 0.00 0.00 3.72
5014 5435 3.420893 TGGCAAGAAAGGAATAGGTGTG 58.579 45.455 0.00 0.00 0.00 3.82
5015 5436 3.330701 TCTGGCAAGAAAGGAATAGGTGT 59.669 43.478 0.00 0.00 0.00 4.16
5016 5437 3.955471 TCTGGCAAGAAAGGAATAGGTG 58.045 45.455 0.00 0.00 0.00 4.00
5017 5438 4.870021 ATCTGGCAAGAAAGGAATAGGT 57.130 40.909 0.00 0.00 35.59 3.08
5018 5439 5.068329 GGAAATCTGGCAAGAAAGGAATAGG 59.932 44.000 0.00 0.00 35.59 2.57
5019 5440 5.068329 GGGAAATCTGGCAAGAAAGGAATAG 59.932 44.000 0.00 0.00 35.59 1.73
5020 5441 4.956075 GGGAAATCTGGCAAGAAAGGAATA 59.044 41.667 0.00 0.00 35.59 1.75
5021 5442 3.771479 GGGAAATCTGGCAAGAAAGGAAT 59.229 43.478 0.00 0.00 35.59 3.01
5022 5443 3.165071 GGGAAATCTGGCAAGAAAGGAA 58.835 45.455 0.00 0.00 35.59 3.36
5023 5444 2.109834 TGGGAAATCTGGCAAGAAAGGA 59.890 45.455 0.00 0.00 35.59 3.36
5024 5445 2.494870 CTGGGAAATCTGGCAAGAAAGG 59.505 50.000 0.00 0.00 35.59 3.11
5025 5446 2.094338 GCTGGGAAATCTGGCAAGAAAG 60.094 50.000 0.00 0.00 35.59 2.62
5026 5447 1.895131 GCTGGGAAATCTGGCAAGAAA 59.105 47.619 0.00 0.00 35.59 2.52
5027 5448 1.203038 TGCTGGGAAATCTGGCAAGAA 60.203 47.619 0.00 0.00 35.59 2.52
5028 5449 0.405198 TGCTGGGAAATCTGGCAAGA 59.595 50.000 0.00 0.00 36.69 3.02
5029 5450 1.259609 TTGCTGGGAAATCTGGCAAG 58.740 50.000 0.00 0.00 37.87 4.01
5030 5451 1.259609 CTTGCTGGGAAATCTGGCAA 58.740 50.000 0.00 0.00 39.99 4.52
5031 5452 0.112995 ACTTGCTGGGAAATCTGGCA 59.887 50.000 0.00 0.00 0.00 4.92
5032 5453 1.260544 AACTTGCTGGGAAATCTGGC 58.739 50.000 0.00 0.00 0.00 4.85
5033 5454 3.826157 TGTTAACTTGCTGGGAAATCTGG 59.174 43.478 7.22 0.00 0.00 3.86
5034 5455 4.616835 GCTGTTAACTTGCTGGGAAATCTG 60.617 45.833 7.22 0.00 0.00 2.90
5035 5456 3.507622 GCTGTTAACTTGCTGGGAAATCT 59.492 43.478 7.22 0.00 0.00 2.40
5036 5457 3.255642 TGCTGTTAACTTGCTGGGAAATC 59.744 43.478 19.32 0.00 0.00 2.17
5037 5458 3.230134 TGCTGTTAACTTGCTGGGAAAT 58.770 40.909 19.32 0.00 0.00 2.17
5038 5459 2.660572 TGCTGTTAACTTGCTGGGAAA 58.339 42.857 19.32 2.25 0.00 3.13
5039 5460 2.356665 TGCTGTTAACTTGCTGGGAA 57.643 45.000 19.32 2.80 0.00 3.97
5040 5461 2.161855 CATGCTGTTAACTTGCTGGGA 58.838 47.619 19.32 5.50 0.00 4.37
5041 5462 1.203052 CCATGCTGTTAACTTGCTGGG 59.797 52.381 19.32 16.65 0.00 4.45
5042 5463 1.888512 ACCATGCTGTTAACTTGCTGG 59.111 47.619 23.28 23.28 34.01 4.85
5043 5464 2.352030 CCACCATGCTGTTAACTTGCTG 60.352 50.000 19.32 15.28 0.00 4.41
5044 5465 1.888512 CCACCATGCTGTTAACTTGCT 59.111 47.619 19.32 7.55 0.00 3.91
5045 5466 1.669795 GCCACCATGCTGTTAACTTGC 60.670 52.381 7.22 11.50 0.00 4.01
5046 5467 1.401409 CGCCACCATGCTGTTAACTTG 60.401 52.381 7.22 1.18 0.00 3.16
5047 5468 0.881118 CGCCACCATGCTGTTAACTT 59.119 50.000 7.22 0.00 0.00 2.66
5048 5469 0.250727 ACGCCACCATGCTGTTAACT 60.251 50.000 7.22 0.00 0.00 2.24
5049 5470 0.596082 AACGCCACCATGCTGTTAAC 59.404 50.000 0.00 0.00 0.00 2.01
5050 5471 0.595588 CAACGCCACCATGCTGTTAA 59.404 50.000 0.00 0.00 0.00 2.01
5051 5472 1.861542 GCAACGCCACCATGCTGTTA 61.862 55.000 0.00 0.00 37.12 2.41
5052 5473 3.041701 CAACGCCACCATGCTGTT 58.958 55.556 0.00 0.00 0.00 3.16
5053 5474 3.673484 GCAACGCCACCATGCTGT 61.673 61.111 0.00 0.00 37.12 4.40
5056 5477 4.424566 CCAGCAACGCCACCATGC 62.425 66.667 0.00 0.00 40.34 4.06
5057 5478 4.424566 GCCAGCAACGCCACCATG 62.425 66.667 0.00 0.00 0.00 3.66
5063 5484 4.362476 CAAAGGGCCAGCAACGCC 62.362 66.667 6.18 0.29 46.29 5.68
5064 5485 3.150647 AACAAAGGGCCAGCAACGC 62.151 57.895 6.18 0.00 0.00 4.84
5065 5486 1.300080 CAACAAAGGGCCAGCAACG 60.300 57.895 6.18 0.00 0.00 4.10
5066 5487 0.530431 CACAACAAAGGGCCAGCAAC 60.530 55.000 6.18 0.00 0.00 4.17
5067 5488 1.821936 CACAACAAAGGGCCAGCAA 59.178 52.632 6.18 0.00 0.00 3.91
5068 5489 2.795110 GCACAACAAAGGGCCAGCA 61.795 57.895 6.18 0.00 0.00 4.41
5069 5490 2.029518 GCACAACAAAGGGCCAGC 59.970 61.111 6.18 0.00 0.00 4.85
5070 5491 1.364901 CAGCACAACAAAGGGCCAG 59.635 57.895 6.18 0.00 0.00 4.85
5071 5492 2.132996 CCAGCACAACAAAGGGCCA 61.133 57.895 6.18 0.00 0.00 5.36
5072 5493 2.736531 CCAGCACAACAAAGGGCC 59.263 61.111 0.00 0.00 0.00 5.80
5073 5494 2.029518 GCCAGCACAACAAAGGGC 59.970 61.111 0.00 0.00 0.00 5.19
5074 5495 2.736531 GGCCAGCACAACAAAGGG 59.263 61.111 0.00 0.00 0.00 3.95
5075 5496 2.336088 CGGCCAGCACAACAAAGG 59.664 61.111 2.24 0.00 0.00 3.11
5076 5497 2.336088 CCGGCCAGCACAACAAAG 59.664 61.111 2.24 0.00 0.00 2.77
5077 5498 2.626255 TACCCGGCCAGCACAACAAA 62.626 55.000 2.24 0.00 0.00 2.83
5078 5499 2.419011 ATACCCGGCCAGCACAACAA 62.419 55.000 2.24 0.00 0.00 2.83
5079 5500 2.419011 AATACCCGGCCAGCACAACA 62.419 55.000 2.24 0.00 0.00 3.33
5080 5501 1.248101 AAATACCCGGCCAGCACAAC 61.248 55.000 2.24 0.00 0.00 3.32
5081 5502 1.075836 AAATACCCGGCCAGCACAA 59.924 52.632 2.24 0.00 0.00 3.33
5082 5503 1.677300 CAAATACCCGGCCAGCACA 60.677 57.895 2.24 0.00 0.00 4.57
5083 5504 3.063743 GCAAATACCCGGCCAGCAC 62.064 63.158 2.24 0.00 0.00 4.40
5084 5505 2.753849 GCAAATACCCGGCCAGCA 60.754 61.111 2.24 0.00 0.00 4.41
5085 5506 2.753849 TGCAAATACCCGGCCAGC 60.754 61.111 2.24 0.00 0.00 4.85
5086 5507 2.774799 GCTGCAAATACCCGGCCAG 61.775 63.158 2.24 0.00 0.00 4.85
5087 5508 2.753849 GCTGCAAATACCCGGCCA 60.754 61.111 2.24 0.00 0.00 5.36
5088 5509 3.527427 GGCTGCAAATACCCGGCC 61.527 66.667 0.50 0.00 45.37 6.13
5089 5510 2.075426 GATGGCTGCAAATACCCGGC 62.075 60.000 0.50 0.00 0.00 6.13
5090 5511 1.455383 GGATGGCTGCAAATACCCGG 61.455 60.000 0.50 0.00 0.00 5.73
5091 5512 2.032981 GGATGGCTGCAAATACCCG 58.967 57.895 0.50 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.