Multiple sequence alignment - TraesCS5B01G283100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G283100 chr5B 100.000 2518 0 0 1 2518 468308331 468305814 0.000000e+00 4650.0
1 TraesCS5B01G283100 chr5B 95.208 480 23 0 1 480 316242138 316242617 0.000000e+00 760.0
2 TraesCS5B01G283100 chr5B 95.000 480 24 0 1 480 131620092 131619613 0.000000e+00 754.0
3 TraesCS5B01G283100 chr5B 95.010 481 22 2 1 480 468467305 468467784 0.000000e+00 754.0
4 TraesCS5B01G283100 chr3B 93.466 2066 100 13 477 2518 644434853 644432799 0.000000e+00 3035.0
5 TraesCS5B01G283100 chr3B 91.202 1523 91 14 477 1978 18541799 18543299 0.000000e+00 2030.0
6 TraesCS5B01G283100 chr3B 95.000 480 24 0 1 480 369255372 369255851 0.000000e+00 754.0
7 TraesCS5B01G283100 chr6B 91.667 1524 96 11 476 1978 564719725 564721238 0.000000e+00 2082.0
8 TraesCS5B01G283100 chr6B 93.324 1408 60 12 844 2231 527622779 527621386 0.000000e+00 2049.0
9 TraesCS5B01G283100 chr6B 91.395 430 24 8 474 900 115236706 115236287 6.040000e-161 577.0
10 TraesCS5B01G283100 chr6B 100.000 29 0 0 899 927 115226268 115226240 1.000000e-03 54.7
11 TraesCS5B01G283100 chr3A 91.202 1523 96 18 477 1978 714029556 714028051 0.000000e+00 2036.0
12 TraesCS5B01G283100 chr7A 89.888 1523 94 17 477 1978 71731329 71732812 0.000000e+00 1905.0
13 TraesCS5B01G283100 chr2A 92.267 1138 59 11 865 1978 617004276 617005408 0.000000e+00 1587.0
14 TraesCS5B01G283100 chr2A 93.669 695 34 4 1284 1978 647179026 647179710 0.000000e+00 1031.0
15 TraesCS5B01G283100 chr5A 93.669 695 38 4 1284 1978 27125971 27125283 0.000000e+00 1035.0
16 TraesCS5B01G283100 chr1A 93.525 695 36 3 1284 1978 401548688 401548003 0.000000e+00 1026.0
17 TraesCS5B01G283100 chr1A 92.268 388 26 4 477 862 410203301 410203686 4.740000e-152 547.0
18 TraesCS5B01G283100 chr1A 84.919 557 51 18 1034 1562 583604890 583605441 1.330000e-147 532.0
19 TraesCS5B01G283100 chr4B 96.875 544 17 0 1975 2518 238177174 238177717 0.000000e+00 911.0
20 TraesCS5B01G283100 chr4B 95.000 480 24 0 1 480 404434604 404435083 0.000000e+00 754.0
21 TraesCS5B01G283100 chr4B 94.792 480 25 0 1 480 422787380 422786901 0.000000e+00 749.0
22 TraesCS5B01G283100 chr4B 92.927 509 25 3 1975 2476 100946993 100947497 0.000000e+00 730.0
23 TraesCS5B01G283100 chr4B 90.989 455 37 3 474 925 627802732 627802279 5.950000e-171 610.0
24 TraesCS5B01G283100 chr4B 91.139 158 14 0 1975 2132 171658447 171658290 5.460000e-52 215.0
25 TraesCS5B01G283100 chr4B 100.000 45 0 0 2474 2518 100949778 100949822 1.610000e-12 84.2
26 TraesCS5B01G283100 chr4D 95.221 544 26 0 1975 2518 68482152 68482695 0.000000e+00 861.0
27 TraesCS5B01G283100 chr4D 91.139 158 14 0 1975 2132 110017043 110017200 5.460000e-52 215.0
28 TraesCS5B01G283100 chr2B 95.208 480 23 0 1 480 384468017 384467538 0.000000e+00 760.0
29 TraesCS5B01G283100 chr2B 95.000 480 24 0 1 480 716154223 716154702 0.000000e+00 754.0
30 TraesCS5B01G283100 chr2B 91.648 455 30 5 474 927 69470169 69469722 7.650000e-175 623.0
31 TraesCS5B01G283100 chr2B 88.817 465 37 5 477 927 799774042 799774505 7.870000e-155 556.0
32 TraesCS5B01G283100 chr1B 95.208 480 23 0 1 480 218493553 218494032 0.000000e+00 760.0
33 TraesCS5B01G283100 chr1B 83.333 582 50 23 1034 1570 676746695 676747274 6.260000e-136 494.0
34 TraesCS5B01G283100 chr4A 90.989 455 37 1 1975 2429 518980712 518981162 5.950000e-171 610.0
35 TraesCS5B01G283100 chr4A 90.506 158 15 0 1975 2132 466652525 466652368 2.540000e-50 209.0
36 TraesCS5B01G283100 chr7D 93.451 397 22 4 477 871 503944578 503944184 1.000000e-163 586.0
37 TraesCS5B01G283100 chr7D 95.556 90 4 0 838 927 503944189 503944100 7.260000e-31 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G283100 chr5B 468305814 468308331 2517 True 4650.0 4650 100.0000 1 2518 1 chr5B.!!$R2 2517
1 TraesCS5B01G283100 chr3B 644432799 644434853 2054 True 3035.0 3035 93.4660 477 2518 1 chr3B.!!$R1 2041
2 TraesCS5B01G283100 chr3B 18541799 18543299 1500 False 2030.0 2030 91.2020 477 1978 1 chr3B.!!$F1 1501
3 TraesCS5B01G283100 chr6B 564719725 564721238 1513 False 2082.0 2082 91.6670 476 1978 1 chr6B.!!$F1 1502
4 TraesCS5B01G283100 chr6B 527621386 527622779 1393 True 2049.0 2049 93.3240 844 2231 1 chr6B.!!$R3 1387
5 TraesCS5B01G283100 chr3A 714028051 714029556 1505 True 2036.0 2036 91.2020 477 1978 1 chr3A.!!$R1 1501
6 TraesCS5B01G283100 chr7A 71731329 71732812 1483 False 1905.0 1905 89.8880 477 1978 1 chr7A.!!$F1 1501
7 TraesCS5B01G283100 chr2A 617004276 617005408 1132 False 1587.0 1587 92.2670 865 1978 1 chr2A.!!$F1 1113
8 TraesCS5B01G283100 chr2A 647179026 647179710 684 False 1031.0 1031 93.6690 1284 1978 1 chr2A.!!$F2 694
9 TraesCS5B01G283100 chr5A 27125283 27125971 688 True 1035.0 1035 93.6690 1284 1978 1 chr5A.!!$R1 694
10 TraesCS5B01G283100 chr1A 401548003 401548688 685 True 1026.0 1026 93.5250 1284 1978 1 chr1A.!!$R1 694
11 TraesCS5B01G283100 chr1A 583604890 583605441 551 False 532.0 532 84.9190 1034 1562 1 chr1A.!!$F2 528
12 TraesCS5B01G283100 chr4B 238177174 238177717 543 False 911.0 911 96.8750 1975 2518 1 chr4B.!!$F1 543
13 TraesCS5B01G283100 chr4B 100946993 100949822 2829 False 407.1 730 96.4635 1975 2518 2 chr4B.!!$F3 543
14 TraesCS5B01G283100 chr4D 68482152 68482695 543 False 861.0 861 95.2210 1975 2518 1 chr4D.!!$F1 543
15 TraesCS5B01G283100 chr1B 676746695 676747274 579 False 494.0 494 83.3330 1034 1570 1 chr1B.!!$F2 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
162 163 0.037326 TATGCCGGATGCGATTCCTC 60.037 55.0 8.71 0.0 45.6 3.71 F
454 455 0.178068 CTTCGGGGTTGTCGGATCAT 59.822 55.0 0.00 0.0 0.0 2.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1056 1075 0.034337 TCGCCAGGAACAGGTTGTAC 59.966 55.0 0.0 0.0 37.31 2.90 R
2242 2334 0.404040 TGGTTCTAAGGTTGCCCAGG 59.596 55.0 0.0 0.0 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 9.727859 AAATGTTTTTGGGTTTTTGTAGTAGTT 57.272 25.926 0.00 0.00 0.00 2.24
63 64 8.710835 ATGTTTTTGGGTTTTTGTAGTAGTTG 57.289 30.769 0.00 0.00 0.00 3.16
64 65 7.668492 TGTTTTTGGGTTTTTGTAGTAGTTGT 58.332 30.769 0.00 0.00 0.00 3.32
65 66 8.800332 TGTTTTTGGGTTTTTGTAGTAGTTGTA 58.200 29.630 0.00 0.00 0.00 2.41
66 67 9.636879 GTTTTTGGGTTTTTGTAGTAGTTGTAA 57.363 29.630 0.00 0.00 0.00 2.41
67 68 9.636879 TTTTTGGGTTTTTGTAGTAGTTGTAAC 57.363 29.630 0.00 0.00 0.00 2.50
68 69 7.934855 TTGGGTTTTTGTAGTAGTTGTAACA 57.065 32.000 0.00 0.00 0.00 2.41
69 70 7.556733 TGGGTTTTTGTAGTAGTTGTAACAG 57.443 36.000 0.00 0.00 0.00 3.16
70 71 7.111466 TGGGTTTTTGTAGTAGTTGTAACAGT 58.889 34.615 0.00 0.00 0.00 3.55
71 72 8.263640 TGGGTTTTTGTAGTAGTTGTAACAGTA 58.736 33.333 0.00 0.00 0.00 2.74
72 73 8.768019 GGGTTTTTGTAGTAGTTGTAACAGTAG 58.232 37.037 0.00 0.00 0.00 2.57
73 74 8.278408 GGTTTTTGTAGTAGTTGTAACAGTAGC 58.722 37.037 0.00 0.00 0.00 3.58
74 75 8.819974 GTTTTTGTAGTAGTTGTAACAGTAGCA 58.180 33.333 0.00 0.00 0.00 3.49
75 76 8.945481 TTTTGTAGTAGTTGTAACAGTAGCAA 57.055 30.769 0.00 0.00 0.00 3.91
76 77 7.935338 TTGTAGTAGTTGTAACAGTAGCAAC 57.065 36.000 10.56 10.56 41.78 4.17
77 78 7.041635 TGTAGTAGTTGTAACAGTAGCAACA 57.958 36.000 17.37 5.92 43.31 3.33
78 79 7.143340 TGTAGTAGTTGTAACAGTAGCAACAG 58.857 38.462 17.37 0.00 43.31 3.16
79 80 6.401047 AGTAGTTGTAACAGTAGCAACAGA 57.599 37.500 17.37 6.74 43.31 3.41
80 81 6.812998 AGTAGTTGTAACAGTAGCAACAGAA 58.187 36.000 17.37 5.11 43.31 3.02
81 82 7.270047 AGTAGTTGTAACAGTAGCAACAGAAA 58.730 34.615 17.37 3.35 43.31 2.52
82 83 6.995511 AGTTGTAACAGTAGCAACAGAAAA 57.004 33.333 17.37 0.00 43.31 2.29
83 84 7.016361 AGTTGTAACAGTAGCAACAGAAAAG 57.984 36.000 17.37 0.00 43.31 2.27
84 85 6.598064 AGTTGTAACAGTAGCAACAGAAAAGT 59.402 34.615 17.37 0.00 43.31 2.66
85 86 7.767198 AGTTGTAACAGTAGCAACAGAAAAGTA 59.233 33.333 17.37 0.00 43.31 2.24
86 87 8.392612 GTTGTAACAGTAGCAACAGAAAAGTAA 58.607 33.333 12.66 0.00 41.29 2.24
87 88 8.495361 TGTAACAGTAGCAACAGAAAAGTAAA 57.505 30.769 0.00 0.00 0.00 2.01
88 89 9.116067 TGTAACAGTAGCAACAGAAAAGTAAAT 57.884 29.630 0.00 0.00 0.00 1.40
91 92 8.324163 ACAGTAGCAACAGAAAAGTAAATAGG 57.676 34.615 0.00 0.00 0.00 2.57
92 93 7.094762 ACAGTAGCAACAGAAAAGTAAATAGGC 60.095 37.037 0.00 0.00 0.00 3.93
93 94 5.296813 AGCAACAGAAAAGTAAATAGGCG 57.703 39.130 0.00 0.00 0.00 5.52
94 95 5.001232 AGCAACAGAAAAGTAAATAGGCGA 58.999 37.500 0.00 0.00 0.00 5.54
95 96 5.472137 AGCAACAGAAAAGTAAATAGGCGAA 59.528 36.000 0.00 0.00 0.00 4.70
96 97 5.795441 GCAACAGAAAAGTAAATAGGCGAAG 59.205 40.000 0.00 0.00 0.00 3.79
97 98 6.348213 GCAACAGAAAAGTAAATAGGCGAAGA 60.348 38.462 0.00 0.00 0.00 2.87
98 99 7.581476 CAACAGAAAAGTAAATAGGCGAAGAA 58.419 34.615 0.00 0.00 0.00 2.52
99 100 7.130303 ACAGAAAAGTAAATAGGCGAAGAAC 57.870 36.000 0.00 0.00 0.00 3.01
100 101 6.708949 ACAGAAAAGTAAATAGGCGAAGAACA 59.291 34.615 0.00 0.00 0.00 3.18
101 102 7.227910 ACAGAAAAGTAAATAGGCGAAGAACAA 59.772 33.333 0.00 0.00 0.00 2.83
102 103 8.237267 CAGAAAAGTAAATAGGCGAAGAACAAT 58.763 33.333 0.00 0.00 0.00 2.71
103 104 9.444600 AGAAAAGTAAATAGGCGAAGAACAATA 57.555 29.630 0.00 0.00 0.00 1.90
106 107 8.732746 AAGTAAATAGGCGAAGAACAATATGT 57.267 30.769 0.00 0.00 0.00 2.29
107 108 8.142994 AGTAAATAGGCGAAGAACAATATGTG 57.857 34.615 0.00 0.00 0.00 3.21
108 109 7.985184 AGTAAATAGGCGAAGAACAATATGTGA 59.015 33.333 0.00 0.00 0.00 3.58
109 110 7.624360 AAATAGGCGAAGAACAATATGTGAA 57.376 32.000 0.00 0.00 0.00 3.18
110 111 7.624360 AATAGGCGAAGAACAATATGTGAAA 57.376 32.000 0.00 0.00 0.00 2.69
111 112 5.957842 AGGCGAAGAACAATATGTGAAAA 57.042 34.783 0.00 0.00 0.00 2.29
112 113 5.942872 AGGCGAAGAACAATATGTGAAAAG 58.057 37.500 0.00 0.00 0.00 2.27
113 114 4.558860 GGCGAAGAACAATATGTGAAAAGC 59.441 41.667 0.00 0.00 0.00 3.51
114 115 5.393962 GCGAAGAACAATATGTGAAAAGCT 58.606 37.500 0.00 0.00 0.00 3.74
115 116 5.509622 GCGAAGAACAATATGTGAAAAGCTC 59.490 40.000 0.00 0.00 0.00 4.09
116 117 5.729883 CGAAGAACAATATGTGAAAAGCTCG 59.270 40.000 0.00 0.00 0.00 5.03
117 118 6.560253 AAGAACAATATGTGAAAAGCTCGT 57.440 33.333 0.00 0.00 0.00 4.18
118 119 7.411480 CGAAGAACAATATGTGAAAAGCTCGTA 60.411 37.037 0.00 0.00 0.00 3.43
119 120 7.295952 AGAACAATATGTGAAAAGCTCGTAG 57.704 36.000 0.00 0.00 0.00 3.51
120 121 7.097192 AGAACAATATGTGAAAAGCTCGTAGA 58.903 34.615 0.00 0.00 0.00 2.59
121 122 6.648725 ACAATATGTGAAAAGCTCGTAGAC 57.351 37.500 0.00 0.00 0.00 2.59
122 123 6.163476 ACAATATGTGAAAAGCTCGTAGACA 58.837 36.000 0.00 0.00 0.00 3.41
123 124 6.649141 ACAATATGTGAAAAGCTCGTAGACAA 59.351 34.615 0.00 0.00 0.00 3.18
124 125 7.334421 ACAATATGTGAAAAGCTCGTAGACAAT 59.666 33.333 0.00 0.00 0.00 2.71
125 126 4.990543 TGTGAAAAGCTCGTAGACAATG 57.009 40.909 0.00 0.00 0.00 2.82
126 127 3.745975 TGTGAAAAGCTCGTAGACAATGG 59.254 43.478 0.00 0.00 0.00 3.16
127 128 3.994392 GTGAAAAGCTCGTAGACAATGGA 59.006 43.478 0.00 0.00 0.00 3.41
128 129 4.631813 GTGAAAAGCTCGTAGACAATGGAT 59.368 41.667 0.00 0.00 0.00 3.41
129 130 4.870426 TGAAAAGCTCGTAGACAATGGATC 59.130 41.667 0.00 0.00 0.00 3.36
130 131 2.783828 AGCTCGTAGACAATGGATCG 57.216 50.000 0.00 0.00 0.00 3.69
131 132 1.132588 GCTCGTAGACAATGGATCGC 58.867 55.000 0.00 0.00 0.00 4.58
132 133 1.269309 GCTCGTAGACAATGGATCGCT 60.269 52.381 0.00 0.00 0.00 4.93
133 134 2.389059 CTCGTAGACAATGGATCGCTG 58.611 52.381 0.00 0.00 0.00 5.18
134 135 2.021457 TCGTAGACAATGGATCGCTGA 58.979 47.619 0.00 0.00 0.00 4.26
135 136 2.623416 TCGTAGACAATGGATCGCTGAT 59.377 45.455 0.00 0.00 0.00 2.90
136 137 2.728318 CGTAGACAATGGATCGCTGATG 59.272 50.000 0.00 0.00 0.00 3.07
137 138 2.251409 AGACAATGGATCGCTGATGG 57.749 50.000 0.00 0.00 0.00 3.51
138 139 1.764723 AGACAATGGATCGCTGATGGA 59.235 47.619 0.00 0.00 0.00 3.41
139 140 2.371179 AGACAATGGATCGCTGATGGAT 59.629 45.455 0.00 0.00 0.00 3.41
140 141 3.580022 AGACAATGGATCGCTGATGGATA 59.420 43.478 0.00 0.00 0.00 2.59
141 142 4.040829 AGACAATGGATCGCTGATGGATAA 59.959 41.667 0.00 0.00 0.00 1.75
142 143 4.914983 ACAATGGATCGCTGATGGATAAT 58.085 39.130 0.00 0.00 0.00 1.28
143 144 5.319453 ACAATGGATCGCTGATGGATAATT 58.681 37.500 0.00 0.00 0.00 1.40
144 145 6.475504 ACAATGGATCGCTGATGGATAATTA 58.524 36.000 0.00 0.00 0.00 1.40
145 146 7.114754 ACAATGGATCGCTGATGGATAATTAT 58.885 34.615 0.00 0.00 0.00 1.28
146 147 7.066645 ACAATGGATCGCTGATGGATAATTATG 59.933 37.037 1.78 0.00 0.00 1.90
147 148 4.877823 TGGATCGCTGATGGATAATTATGC 59.122 41.667 9.85 9.85 0.00 3.14
148 149 4.274459 GGATCGCTGATGGATAATTATGCC 59.726 45.833 13.70 9.88 0.00 4.40
149 150 3.261580 TCGCTGATGGATAATTATGCCG 58.738 45.455 13.70 9.65 0.00 5.69
150 151 2.352651 CGCTGATGGATAATTATGCCGG 59.647 50.000 13.70 0.00 0.00 6.13
151 152 3.609853 GCTGATGGATAATTATGCCGGA 58.390 45.455 5.05 0.00 0.00 5.14
152 153 4.202441 GCTGATGGATAATTATGCCGGAT 58.798 43.478 5.05 0.00 0.00 4.18
153 154 4.036027 GCTGATGGATAATTATGCCGGATG 59.964 45.833 5.05 3.05 0.00 3.51
154 155 3.947196 TGATGGATAATTATGCCGGATGC 59.053 43.478 5.05 0.00 41.77 3.91
155 156 2.355197 TGGATAATTATGCCGGATGCG 58.645 47.619 5.05 0.00 45.60 4.73
156 157 2.027653 TGGATAATTATGCCGGATGCGA 60.028 45.455 8.71 0.00 45.60 5.10
157 158 3.206150 GGATAATTATGCCGGATGCGAT 58.794 45.455 8.71 0.00 45.60 4.58
158 159 3.627577 GGATAATTATGCCGGATGCGATT 59.372 43.478 8.71 1.67 45.60 3.34
159 160 4.260784 GGATAATTATGCCGGATGCGATTC 60.261 45.833 8.71 0.00 45.60 2.52
160 161 1.453155 ATTATGCCGGATGCGATTCC 58.547 50.000 8.71 0.00 45.60 3.01
161 162 0.396435 TTATGCCGGATGCGATTCCT 59.604 50.000 8.71 0.00 45.60 3.36
162 163 0.037326 TATGCCGGATGCGATTCCTC 60.037 55.000 8.71 0.00 45.60 3.71
163 164 2.043604 ATGCCGGATGCGATTCCTCA 62.044 55.000 8.71 0.00 45.60 3.86
164 165 1.302033 GCCGGATGCGATTCCTCAT 60.302 57.895 8.71 0.00 33.30 2.90
165 166 1.572085 GCCGGATGCGATTCCTCATG 61.572 60.000 8.71 0.00 33.30 3.07
166 167 1.572085 CCGGATGCGATTCCTCATGC 61.572 60.000 8.71 0.00 33.30 4.06
167 168 0.881600 CGGATGCGATTCCTCATGCA 60.882 55.000 0.00 0.00 42.22 3.96
168 169 1.311859 GGATGCGATTCCTCATGCAA 58.688 50.000 0.00 0.00 41.22 4.08
169 170 1.884579 GGATGCGATTCCTCATGCAAT 59.115 47.619 0.00 0.00 41.22 3.56
170 171 3.076621 GGATGCGATTCCTCATGCAATA 58.923 45.455 0.00 0.00 41.22 1.90
171 172 3.126514 GGATGCGATTCCTCATGCAATAG 59.873 47.826 0.00 0.00 41.22 1.73
172 173 1.875514 TGCGATTCCTCATGCAATAGC 59.124 47.619 0.00 8.84 42.57 2.97
173 174 2.149578 GCGATTCCTCATGCAATAGCT 58.850 47.619 0.00 0.00 42.74 3.32
174 175 3.244181 TGCGATTCCTCATGCAATAGCTA 60.244 43.478 0.00 0.00 42.74 3.32
175 176 3.937706 GCGATTCCTCATGCAATAGCTAT 59.062 43.478 0.00 0.00 42.74 2.97
176 177 5.111989 GCGATTCCTCATGCAATAGCTATA 58.888 41.667 6.68 0.00 42.74 1.31
177 178 5.582269 GCGATTCCTCATGCAATAGCTATAA 59.418 40.000 6.68 0.00 42.74 0.98
178 179 6.092670 GCGATTCCTCATGCAATAGCTATAAA 59.907 38.462 6.68 0.00 42.74 1.40
179 180 7.361201 GCGATTCCTCATGCAATAGCTATAAAA 60.361 37.037 6.68 0.00 42.74 1.52
180 181 8.671921 CGATTCCTCATGCAATAGCTATAAAAT 58.328 33.333 6.68 0.00 42.74 1.82
183 184 9.453572 TTCCTCATGCAATAGCTATAAAATAGG 57.546 33.333 6.68 10.01 42.74 2.57
184 185 8.605947 TCCTCATGCAATAGCTATAAAATAGGT 58.394 33.333 6.68 4.27 42.74 3.08
185 186 9.236006 CCTCATGCAATAGCTATAAAATAGGTT 57.764 33.333 6.68 0.00 42.74 3.50
187 188 9.791801 TCATGCAATAGCTATAAAATAGGTTGA 57.208 29.630 6.68 0.00 42.74 3.18
203 204 8.958060 AATAGGTTGATATAGAACTAGCTCCA 57.042 34.615 0.00 0.00 0.00 3.86
204 205 8.958060 ATAGGTTGATATAGAACTAGCTCCAA 57.042 34.615 0.00 0.00 0.00 3.53
205 206 7.863901 AGGTTGATATAGAACTAGCTCCAAT 57.136 36.000 0.00 0.00 0.00 3.16
206 207 8.268878 AGGTTGATATAGAACTAGCTCCAATT 57.731 34.615 0.00 0.00 0.00 2.32
207 208 8.371699 AGGTTGATATAGAACTAGCTCCAATTC 58.628 37.037 0.00 0.00 0.00 2.17
208 209 8.150945 GGTTGATATAGAACTAGCTCCAATTCA 58.849 37.037 0.00 0.00 0.00 2.57
209 210 9.717942 GTTGATATAGAACTAGCTCCAATTCAT 57.282 33.333 0.00 0.00 0.00 2.57
210 211 9.935241 TTGATATAGAACTAGCTCCAATTCATC 57.065 33.333 0.00 0.00 0.00 2.92
211 212 9.093458 TGATATAGAACTAGCTCCAATTCATCA 57.907 33.333 0.00 0.00 0.00 3.07
212 213 9.935241 GATATAGAACTAGCTCCAATTCATCAA 57.065 33.333 0.00 0.00 0.00 2.57
214 215 6.939132 AGAACTAGCTCCAATTCATCAATG 57.061 37.500 0.00 0.00 0.00 2.82
215 216 6.421485 AGAACTAGCTCCAATTCATCAATGT 58.579 36.000 0.00 0.00 0.00 2.71
216 217 7.568349 AGAACTAGCTCCAATTCATCAATGTA 58.432 34.615 0.00 0.00 0.00 2.29
217 218 8.049117 AGAACTAGCTCCAATTCATCAATGTAA 58.951 33.333 0.00 0.00 0.00 2.41
218 219 8.757982 AACTAGCTCCAATTCATCAATGTAAT 57.242 30.769 0.00 0.00 0.00 1.89
219 220 8.162878 ACTAGCTCCAATTCATCAATGTAATG 57.837 34.615 0.00 0.00 0.00 1.90
220 221 7.776969 ACTAGCTCCAATTCATCAATGTAATGT 59.223 33.333 0.00 0.00 0.00 2.71
221 222 9.276590 CTAGCTCCAATTCATCAATGTAATGTA 57.723 33.333 0.00 0.00 0.00 2.29
222 223 8.162878 AGCTCCAATTCATCAATGTAATGTAG 57.837 34.615 0.00 0.00 0.00 2.74
223 224 7.230108 AGCTCCAATTCATCAATGTAATGTAGG 59.770 37.037 0.00 0.00 0.00 3.18
224 225 7.275888 TCCAATTCATCAATGTAATGTAGGC 57.724 36.000 0.00 0.00 0.00 3.93
225 226 6.832900 TCCAATTCATCAATGTAATGTAGGCA 59.167 34.615 0.00 0.00 0.00 4.75
226 227 7.506599 TCCAATTCATCAATGTAATGTAGGCAT 59.493 33.333 0.00 0.00 36.80 4.40
227 228 7.597369 CCAATTCATCAATGTAATGTAGGCATG 59.403 37.037 0.00 0.00 35.15 4.06
228 229 7.828508 ATTCATCAATGTAATGTAGGCATGT 57.171 32.000 0.00 0.00 35.15 3.21
229 230 8.922931 ATTCATCAATGTAATGTAGGCATGTA 57.077 30.769 0.00 0.00 35.15 2.29
230 231 8.922931 TTCATCAATGTAATGTAGGCATGTAT 57.077 30.769 0.00 0.00 35.15 2.29
231 232 8.922931 TCATCAATGTAATGTAGGCATGTATT 57.077 30.769 0.00 0.00 35.15 1.89
232 233 9.002600 TCATCAATGTAATGTAGGCATGTATTC 57.997 33.333 0.00 0.00 35.15 1.75
233 234 7.744087 TCAATGTAATGTAGGCATGTATTCC 57.256 36.000 0.00 0.00 35.15 3.01
234 235 6.426633 TCAATGTAATGTAGGCATGTATTCCG 59.573 38.462 0.00 0.00 35.15 4.30
235 236 5.284861 TGTAATGTAGGCATGTATTCCGT 57.715 39.130 0.00 0.00 35.15 4.69
236 237 6.408107 TGTAATGTAGGCATGTATTCCGTA 57.592 37.500 0.00 0.00 35.15 4.02
237 238 6.818233 TGTAATGTAGGCATGTATTCCGTAA 58.182 36.000 0.00 0.00 35.15 3.18
238 239 7.273712 TGTAATGTAGGCATGTATTCCGTAAA 58.726 34.615 0.00 0.00 35.15 2.01
239 240 7.934665 TGTAATGTAGGCATGTATTCCGTAAAT 59.065 33.333 0.00 0.00 35.15 1.40
240 241 9.426837 GTAATGTAGGCATGTATTCCGTAAATA 57.573 33.333 0.00 0.00 35.15 1.40
241 242 8.547967 AATGTAGGCATGTATTCCGTAAATAG 57.452 34.615 0.00 0.00 35.15 1.73
242 243 7.058023 TGTAGGCATGTATTCCGTAAATAGT 57.942 36.000 0.00 0.00 30.39 2.12
243 244 7.149973 TGTAGGCATGTATTCCGTAAATAGTC 58.850 38.462 0.00 0.00 30.39 2.59
244 245 6.169557 AGGCATGTATTCCGTAAATAGTCA 57.830 37.500 0.00 0.00 30.39 3.41
245 246 6.769512 AGGCATGTATTCCGTAAATAGTCAT 58.230 36.000 0.00 0.00 30.39 3.06
246 247 7.903145 AGGCATGTATTCCGTAAATAGTCATA 58.097 34.615 0.00 0.00 30.39 2.15
247 248 7.817962 AGGCATGTATTCCGTAAATAGTCATAC 59.182 37.037 0.00 0.00 30.39 2.39
248 249 7.201410 GGCATGTATTCCGTAAATAGTCATACG 60.201 40.741 0.00 0.00 43.31 3.06
249 250 7.327761 GCATGTATTCCGTAAATAGTCATACGT 59.672 37.037 0.00 0.00 42.41 3.57
250 251 8.635983 CATGTATTCCGTAAATAGTCATACGTG 58.364 37.037 0.00 0.00 42.41 4.49
251 252 6.638063 TGTATTCCGTAAATAGTCATACGTGC 59.362 38.462 0.00 0.00 42.41 5.34
252 253 4.906065 TCCGTAAATAGTCATACGTGCT 57.094 40.909 0.00 0.00 42.41 4.40
253 254 5.252969 TCCGTAAATAGTCATACGTGCTT 57.747 39.130 0.00 0.00 42.41 3.91
254 255 6.375945 TCCGTAAATAGTCATACGTGCTTA 57.624 37.500 0.00 0.00 42.41 3.09
255 256 6.973843 TCCGTAAATAGTCATACGTGCTTAT 58.026 36.000 0.00 0.00 42.41 1.73
256 257 6.859508 TCCGTAAATAGTCATACGTGCTTATG 59.140 38.462 0.00 0.00 42.41 1.90
257 258 6.089016 CCGTAAATAGTCATACGTGCTTATGG 59.911 42.308 0.00 0.00 42.41 2.74
258 259 6.859508 CGTAAATAGTCATACGTGCTTATGGA 59.140 38.462 0.00 0.00 39.88 3.41
259 260 7.380333 CGTAAATAGTCATACGTGCTTATGGAA 59.620 37.037 0.00 0.00 39.88 3.53
260 261 9.037737 GTAAATAGTCATACGTGCTTATGGAAA 57.962 33.333 0.00 0.00 31.33 3.13
261 262 8.500753 AAATAGTCATACGTGCTTATGGAAAA 57.499 30.769 0.00 0.00 31.33 2.29
262 263 7.715265 ATAGTCATACGTGCTTATGGAAAAG 57.285 36.000 0.00 0.00 31.33 2.27
263 264 5.730550 AGTCATACGTGCTTATGGAAAAGA 58.269 37.500 0.00 0.00 31.33 2.52
264 265 6.170506 AGTCATACGTGCTTATGGAAAAGAA 58.829 36.000 0.00 0.00 31.33 2.52
265 266 6.092259 AGTCATACGTGCTTATGGAAAAGAAC 59.908 38.462 0.00 0.00 32.42 3.01
266 267 6.092259 GTCATACGTGCTTATGGAAAAGAACT 59.908 38.462 0.00 0.00 33.44 3.01
267 268 6.653320 TCATACGTGCTTATGGAAAAGAACTT 59.347 34.615 0.00 0.00 33.44 2.66
268 269 5.108385 ACGTGCTTATGGAAAAGAACTTG 57.892 39.130 0.00 0.00 33.44 3.16
269 270 4.578928 ACGTGCTTATGGAAAAGAACTTGT 59.421 37.500 0.00 0.00 33.44 3.16
270 271 5.761234 ACGTGCTTATGGAAAAGAACTTGTA 59.239 36.000 0.00 0.00 33.44 2.41
271 272 6.430000 ACGTGCTTATGGAAAAGAACTTGTAT 59.570 34.615 0.00 0.00 33.44 2.29
272 273 6.742718 CGTGCTTATGGAAAAGAACTTGTATG 59.257 38.462 0.00 0.00 33.44 2.39
273 274 7.360861 CGTGCTTATGGAAAAGAACTTGTATGA 60.361 37.037 0.00 0.00 33.44 2.15
274 275 7.750903 GTGCTTATGGAAAAGAACTTGTATGAC 59.249 37.037 0.00 0.00 32.93 3.06
275 276 6.961554 GCTTATGGAAAAGAACTTGTATGACG 59.038 38.462 0.00 0.00 0.00 4.35
276 277 7.360946 GCTTATGGAAAAGAACTTGTATGACGT 60.361 37.037 0.00 0.00 0.00 4.34
277 278 9.146984 CTTATGGAAAAGAACTTGTATGACGTA 57.853 33.333 0.00 0.00 0.00 3.57
278 279 9.661563 TTATGGAAAAGAACTTGTATGACGTAT 57.338 29.630 0.00 0.00 0.00 3.06
280 281 9.832445 ATGGAAAAGAACTTGTATGACGTATAT 57.168 29.630 0.00 0.00 0.00 0.86
281 282 9.661563 TGGAAAAGAACTTGTATGACGTATATT 57.338 29.630 0.00 0.00 0.00 1.28
282 283 9.916397 GGAAAAGAACTTGTATGACGTATATTG 57.084 33.333 0.00 0.00 0.00 1.90
285 286 8.644318 AAGAACTTGTATGACGTATATTGTCC 57.356 34.615 0.00 0.00 35.46 4.02
286 287 8.008513 AGAACTTGTATGACGTATATTGTCCT 57.991 34.615 0.00 0.23 35.46 3.85
287 288 9.128404 AGAACTTGTATGACGTATATTGTCCTA 57.872 33.333 0.00 0.00 35.46 2.94
288 289 9.178427 GAACTTGTATGACGTATATTGTCCTAC 57.822 37.037 12.49 12.49 37.71 3.18
289 290 7.655490 ACTTGTATGACGTATATTGTCCTACC 58.345 38.462 14.84 4.88 36.93 3.18
290 291 6.579666 TGTATGACGTATATTGTCCTACCC 57.420 41.667 14.84 1.09 36.93 3.69
291 292 6.309357 TGTATGACGTATATTGTCCTACCCT 58.691 40.000 14.84 0.00 36.93 4.34
292 293 5.979288 ATGACGTATATTGTCCTACCCTC 57.021 43.478 0.00 0.00 35.46 4.30
293 294 4.147321 TGACGTATATTGTCCTACCCTCC 58.853 47.826 0.00 0.00 35.46 4.30
294 295 3.504375 ACGTATATTGTCCTACCCTCCC 58.496 50.000 0.00 0.00 0.00 4.30
295 296 3.117016 ACGTATATTGTCCTACCCTCCCA 60.117 47.826 0.00 0.00 0.00 4.37
296 297 4.094476 CGTATATTGTCCTACCCTCCCAT 58.906 47.826 0.00 0.00 0.00 4.00
297 298 4.530946 CGTATATTGTCCTACCCTCCCATT 59.469 45.833 0.00 0.00 0.00 3.16
298 299 5.568825 CGTATATTGTCCTACCCTCCCATTG 60.569 48.000 0.00 0.00 0.00 2.82
299 300 0.623723 TTGTCCTACCCTCCCATTGC 59.376 55.000 0.00 0.00 0.00 3.56
300 301 0.548926 TGTCCTACCCTCCCATTGCA 60.549 55.000 0.00 0.00 0.00 4.08
301 302 0.181350 GTCCTACCCTCCCATTGCAG 59.819 60.000 0.00 0.00 0.00 4.41
302 303 1.152881 CCTACCCTCCCATTGCAGC 60.153 63.158 0.00 0.00 0.00 5.25
303 304 1.524621 CTACCCTCCCATTGCAGCG 60.525 63.158 0.00 0.00 0.00 5.18
304 305 2.947938 CTACCCTCCCATTGCAGCGG 62.948 65.000 0.00 0.00 0.00 5.52
307 308 4.431131 CTCCCATTGCAGCGGGGT 62.431 66.667 19.51 0.00 43.29 4.95
308 309 4.424711 TCCCATTGCAGCGGGGTC 62.425 66.667 19.51 0.00 43.29 4.46
310 311 4.431131 CCATTGCAGCGGGGTCCT 62.431 66.667 0.00 0.00 0.00 3.85
311 312 2.361610 CATTGCAGCGGGGTCCTT 60.362 61.111 0.00 0.00 0.00 3.36
312 313 1.077787 CATTGCAGCGGGGTCCTTA 60.078 57.895 0.00 0.00 0.00 2.69
313 314 1.077716 ATTGCAGCGGGGTCCTTAC 60.078 57.895 0.00 0.00 0.00 2.34
314 315 2.869503 ATTGCAGCGGGGTCCTTACG 62.870 60.000 0.00 0.00 0.00 3.18
315 316 4.832608 GCAGCGGGGTCCTTACGG 62.833 72.222 0.00 0.00 0.00 4.02
316 317 3.072468 CAGCGGGGTCCTTACGGA 61.072 66.667 0.00 0.00 36.83 4.69
317 318 2.284112 AGCGGGGTCCTTACGGAA 60.284 61.111 0.00 0.00 42.08 4.30
318 319 1.914764 AGCGGGGTCCTTACGGAAA 60.915 57.895 0.00 0.00 42.08 3.13
319 320 1.742880 GCGGGGTCCTTACGGAAAC 60.743 63.158 0.00 0.00 42.08 2.78
320 321 1.977685 CGGGGTCCTTACGGAAACT 59.022 57.895 0.00 0.00 42.08 2.66
321 322 1.185315 CGGGGTCCTTACGGAAACTA 58.815 55.000 0.00 0.00 42.08 2.24
322 323 1.550072 CGGGGTCCTTACGGAAACTAA 59.450 52.381 0.00 0.00 42.08 2.24
323 324 2.417787 CGGGGTCCTTACGGAAACTAAG 60.418 54.545 0.00 0.00 42.08 2.18
324 325 2.093288 GGGGTCCTTACGGAAACTAAGG 60.093 54.545 3.02 3.02 42.08 2.69
325 326 2.093288 GGGTCCTTACGGAAACTAAGGG 60.093 54.545 8.46 0.00 42.08 3.95
326 327 2.833943 GGTCCTTACGGAAACTAAGGGA 59.166 50.000 8.46 0.00 42.08 4.20
327 328 3.453717 GGTCCTTACGGAAACTAAGGGAT 59.546 47.826 8.46 0.00 42.08 3.85
328 329 4.651045 GGTCCTTACGGAAACTAAGGGATA 59.349 45.833 8.46 0.00 42.08 2.59
329 330 5.306419 GGTCCTTACGGAAACTAAGGGATAT 59.694 44.000 8.46 0.00 42.08 1.63
330 331 6.183361 GGTCCTTACGGAAACTAAGGGATATT 60.183 42.308 8.46 0.00 42.08 1.28
331 332 7.015584 GGTCCTTACGGAAACTAAGGGATATTA 59.984 40.741 8.46 0.00 42.08 0.98
332 333 8.424133 GTCCTTACGGAAACTAAGGGATATTAA 58.576 37.037 8.46 0.00 42.08 1.40
333 334 8.645110 TCCTTACGGAAACTAAGGGATATTAAG 58.355 37.037 8.46 0.00 39.59 1.85
334 335 7.876582 CCTTACGGAAACTAAGGGATATTAAGG 59.123 40.741 1.69 0.00 37.46 2.69
335 336 6.819947 ACGGAAACTAAGGGATATTAAGGT 57.180 37.500 0.00 0.00 0.00 3.50
336 337 6.824553 ACGGAAACTAAGGGATATTAAGGTC 58.175 40.000 0.00 0.00 0.00 3.85
337 338 6.614496 ACGGAAACTAAGGGATATTAAGGTCT 59.386 38.462 0.00 0.00 0.00 3.85
338 339 7.153315 CGGAAACTAAGGGATATTAAGGTCTC 58.847 42.308 0.00 0.00 0.00 3.36
339 340 7.451732 GGAAACTAAGGGATATTAAGGTCTCC 58.548 42.308 0.00 0.00 0.00 3.71
340 341 7.292827 GGAAACTAAGGGATATTAAGGTCTCCT 59.707 40.741 0.00 0.00 33.87 3.69
341 342 8.640033 AAACTAAGGGATATTAAGGTCTCCTT 57.360 34.615 6.30 6.30 46.63 3.36
342 343 8.640033 AACTAAGGGATATTAAGGTCTCCTTT 57.360 34.615 6.35 7.46 41.69 3.11
343 344 8.640033 ACTAAGGGATATTAAGGTCTCCTTTT 57.360 34.615 6.35 0.00 41.69 2.27
344 345 9.739737 ACTAAGGGATATTAAGGTCTCCTTTTA 57.260 33.333 6.35 0.95 41.69 1.52
355 356 6.223351 AGGTCTCCTTTTAATAGAGAACCG 57.777 41.667 9.96 0.00 43.95 4.44
356 357 5.128991 AGGTCTCCTTTTAATAGAGAACCGG 59.871 44.000 0.00 0.00 43.95 5.28
357 358 5.128335 GGTCTCCTTTTAATAGAGAACCGGA 59.872 44.000 9.46 0.00 38.22 5.14
358 359 6.041511 GTCTCCTTTTAATAGAGAACCGGAC 58.958 44.000 9.46 0.99 38.34 4.79
359 360 5.128335 TCTCCTTTTAATAGAGAACCGGACC 59.872 44.000 9.46 0.00 33.80 4.46
360 361 4.778958 TCCTTTTAATAGAGAACCGGACCA 59.221 41.667 9.46 0.00 0.00 4.02
361 362 5.248934 TCCTTTTAATAGAGAACCGGACCAA 59.751 40.000 9.46 0.00 0.00 3.67
362 363 5.941647 CCTTTTAATAGAGAACCGGACCAAA 59.058 40.000 9.46 0.00 0.00 3.28
363 364 6.093633 CCTTTTAATAGAGAACCGGACCAAAG 59.906 42.308 9.46 3.43 0.00 2.77
364 365 2.693267 ATAGAGAACCGGACCAAAGC 57.307 50.000 9.46 0.00 0.00 3.51
365 366 1.344065 TAGAGAACCGGACCAAAGCA 58.656 50.000 9.46 0.00 0.00 3.91
366 367 0.693049 AGAGAACCGGACCAAAGCAT 59.307 50.000 9.46 0.00 0.00 3.79
367 368 1.073923 AGAGAACCGGACCAAAGCATT 59.926 47.619 9.46 0.00 0.00 3.56
368 369 2.304761 AGAGAACCGGACCAAAGCATTA 59.695 45.455 9.46 0.00 0.00 1.90
369 370 3.078837 GAGAACCGGACCAAAGCATTAA 58.921 45.455 9.46 0.00 0.00 1.40
370 371 2.817844 AGAACCGGACCAAAGCATTAAC 59.182 45.455 9.46 0.00 0.00 2.01
371 372 2.279935 ACCGGACCAAAGCATTAACA 57.720 45.000 9.46 0.00 0.00 2.41
372 373 1.883926 ACCGGACCAAAGCATTAACAC 59.116 47.619 9.46 0.00 0.00 3.32
373 374 1.883275 CCGGACCAAAGCATTAACACA 59.117 47.619 0.00 0.00 0.00 3.72
374 375 2.491693 CCGGACCAAAGCATTAACACAT 59.508 45.455 0.00 0.00 0.00 3.21
375 376 3.692101 CCGGACCAAAGCATTAACACATA 59.308 43.478 0.00 0.00 0.00 2.29
376 377 4.201910 CCGGACCAAAGCATTAACACATAG 60.202 45.833 0.00 0.00 0.00 2.23
377 378 4.394920 CGGACCAAAGCATTAACACATAGT 59.605 41.667 0.00 0.00 0.00 2.12
378 379 5.640732 GGACCAAAGCATTAACACATAGTG 58.359 41.667 0.00 0.00 39.75 2.74
379 380 5.414454 GGACCAAAGCATTAACACATAGTGA 59.586 40.000 3.88 0.00 36.96 3.41
380 381 6.072175 GGACCAAAGCATTAACACATAGTGAA 60.072 38.462 3.88 0.00 36.96 3.18
381 382 7.362920 GGACCAAAGCATTAACACATAGTGAAT 60.363 37.037 3.88 0.00 36.96 2.57
382 383 8.574251 ACCAAAGCATTAACACATAGTGAATA 57.426 30.769 3.88 0.00 36.96 1.75
383 384 8.458843 ACCAAAGCATTAACACATAGTGAATAC 58.541 33.333 3.88 0.00 36.96 1.89
384 385 8.458052 CCAAAGCATTAACACATAGTGAATACA 58.542 33.333 3.88 0.00 36.96 2.29
387 388 8.962884 AGCATTAACACATAGTGAATACATGA 57.037 30.769 0.00 0.00 36.96 3.07
388 389 9.394767 AGCATTAACACATAGTGAATACATGAA 57.605 29.630 0.00 0.00 36.96 2.57
389 390 9.438291 GCATTAACACATAGTGAATACATGAAC 57.562 33.333 0.00 0.00 36.96 3.18
392 393 7.849804 AACACATAGTGAATACATGAACTCC 57.150 36.000 0.00 0.00 36.96 3.85
393 394 7.187824 ACACATAGTGAATACATGAACTCCT 57.812 36.000 0.00 0.00 36.96 3.69
394 395 7.268586 ACACATAGTGAATACATGAACTCCTC 58.731 38.462 0.00 0.00 36.96 3.71
395 396 7.093333 ACACATAGTGAATACATGAACTCCTCA 60.093 37.037 0.00 0.00 36.96 3.86
396 397 7.765819 CACATAGTGAATACATGAACTCCTCAA 59.234 37.037 0.00 0.00 34.79 3.02
397 398 8.321353 ACATAGTGAATACATGAACTCCTCAAA 58.679 33.333 0.00 0.00 37.67 2.69
398 399 8.607459 CATAGTGAATACATGAACTCCTCAAAC 58.393 37.037 0.00 0.00 37.67 2.93
399 400 6.773638 AGTGAATACATGAACTCCTCAAACT 58.226 36.000 0.00 0.00 37.67 2.66
400 401 7.907389 AGTGAATACATGAACTCCTCAAACTA 58.093 34.615 0.00 0.00 37.67 2.24
401 402 7.819900 AGTGAATACATGAACTCCTCAAACTAC 59.180 37.037 0.00 0.00 37.67 2.73
402 403 6.811665 TGAATACATGAACTCCTCAAACTACG 59.188 38.462 0.00 0.00 37.67 3.51
403 404 3.926616 ACATGAACTCCTCAAACTACGG 58.073 45.455 0.00 0.00 37.67 4.02
404 405 3.323979 ACATGAACTCCTCAAACTACGGT 59.676 43.478 0.00 0.00 37.67 4.83
405 406 3.655276 TGAACTCCTCAAACTACGGTC 57.345 47.619 0.00 0.00 0.00 4.79
406 407 2.960384 TGAACTCCTCAAACTACGGTCA 59.040 45.455 0.00 0.00 0.00 4.02
407 408 3.576982 TGAACTCCTCAAACTACGGTCAT 59.423 43.478 0.00 0.00 0.00 3.06
408 409 3.870633 ACTCCTCAAACTACGGTCATC 57.129 47.619 0.00 0.00 0.00 2.92
409 410 3.162666 ACTCCTCAAACTACGGTCATCA 58.837 45.455 0.00 0.00 0.00 3.07
410 411 3.056749 ACTCCTCAAACTACGGTCATCAC 60.057 47.826 0.00 0.00 0.00 3.06
411 412 2.232941 TCCTCAAACTACGGTCATCACC 59.767 50.000 0.00 0.00 39.69 4.02
422 423 3.372660 GGTCATCACCGAGAAGTATCC 57.627 52.381 0.00 0.00 31.06 2.59
423 424 2.036089 GGTCATCACCGAGAAGTATCCC 59.964 54.545 0.00 0.00 31.06 3.85
424 425 1.954382 TCATCACCGAGAAGTATCCCG 59.046 52.381 0.00 0.00 0.00 5.14
425 426 1.954382 CATCACCGAGAAGTATCCCGA 59.046 52.381 0.00 0.00 0.00 5.14
426 427 2.359981 TCACCGAGAAGTATCCCGAT 57.640 50.000 0.00 0.00 0.00 4.18
427 428 2.662866 TCACCGAGAAGTATCCCGATT 58.337 47.619 0.00 0.00 0.00 3.34
428 429 3.824133 TCACCGAGAAGTATCCCGATTA 58.176 45.455 0.00 0.00 0.00 1.75
429 430 4.404640 TCACCGAGAAGTATCCCGATTAT 58.595 43.478 0.00 0.00 0.00 1.28
430 431 4.831155 TCACCGAGAAGTATCCCGATTATT 59.169 41.667 0.00 0.00 0.00 1.40
431 432 4.923871 CACCGAGAAGTATCCCGATTATTG 59.076 45.833 0.00 0.00 0.00 1.90
432 433 4.587684 ACCGAGAAGTATCCCGATTATTGT 59.412 41.667 0.00 0.00 0.00 2.71
433 434 5.162075 CCGAGAAGTATCCCGATTATTGTC 58.838 45.833 0.00 0.00 0.00 3.18
434 435 5.278808 CCGAGAAGTATCCCGATTATTGTCA 60.279 44.000 0.00 0.00 0.00 3.58
435 436 5.629849 CGAGAAGTATCCCGATTATTGTCAC 59.370 44.000 0.00 0.00 0.00 3.67
436 437 6.515200 CGAGAAGTATCCCGATTATTGTCACT 60.515 42.308 0.00 0.00 0.00 3.41
437 438 7.125792 AGAAGTATCCCGATTATTGTCACTT 57.874 36.000 0.00 0.00 0.00 3.16
438 439 7.210873 AGAAGTATCCCGATTATTGTCACTTC 58.789 38.462 0.00 0.00 39.59 3.01
439 440 5.529791 AGTATCCCGATTATTGTCACTTCG 58.470 41.667 0.00 0.00 0.00 3.79
440 441 3.173668 TCCCGATTATTGTCACTTCGG 57.826 47.619 2.80 2.80 46.79 4.30
442 443 2.210116 CCGATTATTGTCACTTCGGGG 58.790 52.381 1.85 0.00 44.24 5.73
443 444 2.419574 CCGATTATTGTCACTTCGGGGT 60.420 50.000 1.85 0.00 44.24 4.95
444 445 3.267483 CGATTATTGTCACTTCGGGGTT 58.733 45.455 0.00 0.00 0.00 4.11
445 446 3.063452 CGATTATTGTCACTTCGGGGTTG 59.937 47.826 0.00 0.00 0.00 3.77
446 447 3.495434 TTATTGTCACTTCGGGGTTGT 57.505 42.857 0.00 0.00 0.00 3.32
447 448 1.892209 ATTGTCACTTCGGGGTTGTC 58.108 50.000 0.00 0.00 0.00 3.18
448 449 0.531090 TTGTCACTTCGGGGTTGTCG 60.531 55.000 0.00 0.00 0.00 4.35
449 450 1.666872 GTCACTTCGGGGTTGTCGG 60.667 63.158 0.00 0.00 0.00 4.79
450 451 1.833492 TCACTTCGGGGTTGTCGGA 60.833 57.895 0.00 0.00 0.00 4.55
451 452 1.189524 TCACTTCGGGGTTGTCGGAT 61.190 55.000 0.00 0.00 0.00 4.18
452 453 0.739813 CACTTCGGGGTTGTCGGATC 60.740 60.000 0.00 0.00 0.00 3.36
453 454 1.189524 ACTTCGGGGTTGTCGGATCA 61.190 55.000 0.00 0.00 0.00 2.92
454 455 0.178068 CTTCGGGGTTGTCGGATCAT 59.822 55.000 0.00 0.00 0.00 2.45
455 456 1.411246 CTTCGGGGTTGTCGGATCATA 59.589 52.381 0.00 0.00 0.00 2.15
456 457 1.487300 TCGGGGTTGTCGGATCATAA 58.513 50.000 0.00 0.00 0.00 1.90
457 458 1.137479 TCGGGGTTGTCGGATCATAAC 59.863 52.381 0.00 0.00 0.00 1.89
458 459 1.134640 CGGGGTTGTCGGATCATAACA 60.135 52.381 0.00 0.00 0.00 2.41
459 460 2.285977 GGGGTTGTCGGATCATAACAC 58.714 52.381 0.00 0.00 0.00 3.32
460 461 2.355310 GGGGTTGTCGGATCATAACACA 60.355 50.000 0.00 0.00 0.00 3.72
461 462 3.340034 GGGTTGTCGGATCATAACACAA 58.660 45.455 0.00 0.00 0.00 3.33
462 463 3.754323 GGGTTGTCGGATCATAACACAAA 59.246 43.478 0.00 0.00 0.00 2.83
463 464 4.216687 GGGTTGTCGGATCATAACACAAAA 59.783 41.667 0.00 0.00 0.00 2.44
464 465 5.105917 GGGTTGTCGGATCATAACACAAAAT 60.106 40.000 0.00 0.00 0.00 1.82
465 466 6.094325 GGGTTGTCGGATCATAACACAAAATA 59.906 38.462 0.00 0.00 0.00 1.40
466 467 7.186804 GGTTGTCGGATCATAACACAAAATAG 58.813 38.462 0.00 0.00 0.00 1.73
467 468 6.918892 TGTCGGATCATAACACAAAATAGG 57.081 37.500 0.00 0.00 0.00 2.57
468 469 6.411376 TGTCGGATCATAACACAAAATAGGT 58.589 36.000 0.00 0.00 0.00 3.08
469 470 6.315144 TGTCGGATCATAACACAAAATAGGTG 59.685 38.462 0.00 0.00 41.95 4.00
470 471 6.537301 GTCGGATCATAACACAAAATAGGTGA 59.463 38.462 0.00 0.00 39.53 4.02
471 472 6.537301 TCGGATCATAACACAAAATAGGTGAC 59.463 38.462 0.00 0.00 39.53 3.67
549 550 3.703001 ATGGGCGCTACTGCTAATTAT 57.297 42.857 7.64 0.00 36.97 1.28
555 556 6.070995 TGGGCGCTACTGCTAATTATTAGTAT 60.071 38.462 7.64 2.86 35.66 2.12
587 588 1.918595 AAACCGCGCTACTACTAAGC 58.081 50.000 5.56 0.00 36.60 3.09
593 594 3.058432 CCGCGCTACTACTAAGCTGATAA 60.058 47.826 5.56 0.00 37.85 1.75
596 597 6.458478 CCGCGCTACTACTAAGCTGATAATAT 60.458 42.308 5.56 0.00 37.85 1.28
677 678 1.546961 CCATAGTAGTAGCGAGGGGG 58.453 60.000 0.00 0.00 0.00 5.40
755 757 0.542467 TACTAAGCGTGTCCACCCCA 60.542 55.000 0.00 0.00 0.00 4.96
768 770 1.385347 ACCCCAGCCCGATCCATAA 60.385 57.895 0.00 0.00 0.00 1.90
807 824 3.481999 ACCCCACCAACCGTCGTT 61.482 61.111 0.00 0.00 0.00 3.85
863 880 2.042433 CTCCGATCTAGATCCCCTCCTT 59.958 54.545 23.97 0.00 34.40 3.36
980 999 3.751049 ATCCGCCCTTCTCCGCCTA 62.751 63.158 0.00 0.00 0.00 3.93
991 1010 4.690719 CCGCCTACGCCAACACCA 62.691 66.667 0.00 0.00 38.22 4.17
1063 1082 2.439519 CCATGGGCGGGTACAACC 60.440 66.667 2.85 0.00 37.60 3.77
1064 1083 2.674754 CATGGGCGGGTACAACCT 59.325 61.111 0.00 0.00 38.64 3.50
1079 1098 1.990160 AACCTGTTCCTGGCGACCAA 61.990 55.000 0.00 0.00 30.80 3.67
1081 1100 1.371183 CTGTTCCTGGCGACCAAGA 59.629 57.895 0.00 0.00 30.80 3.02
1114 1133 1.464376 CCGCATCTATGACCCGGACT 61.464 60.000 0.73 0.00 41.34 3.85
1132 1151 1.867919 CTTGGAGTCGCTGGAGTCGT 61.868 60.000 0.00 0.00 42.50 4.34
1294 1339 1.444250 GGTGTCCGTGTCTTCCACA 59.556 57.895 0.00 0.00 44.78 4.17
1345 1408 9.267084 GGTGTATTATTGGTTTTGTTCAAACAT 57.733 29.630 0.00 0.00 46.01 2.71
1365 1428 2.969821 ATAAAGTGACCTGCAACCCA 57.030 45.000 0.00 0.00 0.00 4.51
1378 1442 4.698780 CCTGCAACCCAGTGATGATATATG 59.301 45.833 0.00 0.00 40.06 1.78
1386 1450 5.452496 CCCAGTGATGATATATGGGTCGATC 60.452 48.000 0.21 0.00 44.71 3.69
1461 1526 0.536006 AAGCTTCTTGTCTGCGCCTT 60.536 50.000 4.18 0.00 0.00 4.35
1553 1627 3.183574 CGACGAAACATGCTTGTCACTAA 59.816 43.478 5.61 0.00 34.06 2.24
1600 1682 0.544223 CTCTCTCTCTCGGGAGGACA 59.456 60.000 13.54 0.00 39.86 4.02
1603 1685 1.208844 TCTCTCTCGGGAGGACACCT 61.209 60.000 13.54 0.00 39.86 4.00
1722 1804 2.733218 CGCAGTCGTCGAGCCAAA 60.733 61.111 0.00 0.00 0.00 3.28
1795 1877 6.102663 GCTTGCTACAGAAACATTAGAGAGA 58.897 40.000 0.00 0.00 0.00 3.10
1882 1964 5.835819 TCCTGTGATTGGAGATAGTAGGAAG 59.164 44.000 0.00 0.00 0.00 3.46
2028 2110 0.879765 GCACATCAGTCTTTGCTGCT 59.120 50.000 0.00 0.00 36.49 4.24
2163 2252 3.669354 CTCTTCATGAGGCCCGTAC 57.331 57.895 0.00 0.00 39.08 3.67
2231 2323 4.679373 ATATGTCCTGCTGTACCTTCTG 57.321 45.455 0.00 0.00 0.00 3.02
2242 2334 3.259064 TGTACCTTCTGCGCATACTTTC 58.741 45.455 12.24 0.00 0.00 2.62
2449 2541 9.678260 AGAAAAGATGATGCTCTTTGTAGTTAT 57.322 29.630 0.00 0.00 43.05 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.727859 AACTACTACAAAAACCCAAAAACATTT 57.272 25.926 0.00 0.00 0.00 2.32
37 38 9.157104 CAACTACTACAAAAACCCAAAAACATT 57.843 29.630 0.00 0.00 0.00 2.71
38 39 8.315482 ACAACTACTACAAAAACCCAAAAACAT 58.685 29.630 0.00 0.00 0.00 2.71
39 40 7.668492 ACAACTACTACAAAAACCCAAAAACA 58.332 30.769 0.00 0.00 0.00 2.83
40 41 9.636879 TTACAACTACTACAAAAACCCAAAAAC 57.363 29.630 0.00 0.00 0.00 2.43
41 42 9.636879 GTTACAACTACTACAAAAACCCAAAAA 57.363 29.630 0.00 0.00 0.00 1.94
42 43 8.800332 TGTTACAACTACTACAAAAACCCAAAA 58.200 29.630 0.00 0.00 0.00 2.44
43 44 8.345724 TGTTACAACTACTACAAAAACCCAAA 57.654 30.769 0.00 0.00 0.00 3.28
44 45 7.611079 ACTGTTACAACTACTACAAAAACCCAA 59.389 33.333 0.00 0.00 0.00 4.12
45 46 7.111466 ACTGTTACAACTACTACAAAAACCCA 58.889 34.615 0.00 0.00 0.00 4.51
46 47 7.558161 ACTGTTACAACTACTACAAAAACCC 57.442 36.000 0.00 0.00 0.00 4.11
47 48 8.278408 GCTACTGTTACAACTACTACAAAAACC 58.722 37.037 0.00 0.00 0.00 3.27
48 49 8.819974 TGCTACTGTTACAACTACTACAAAAAC 58.180 33.333 0.00 0.00 0.00 2.43
49 50 8.945481 TGCTACTGTTACAACTACTACAAAAA 57.055 30.769 0.00 0.00 0.00 1.94
50 51 8.819974 GTTGCTACTGTTACAACTACTACAAAA 58.180 33.333 14.65 0.00 40.36 2.44
51 52 7.980662 TGTTGCTACTGTTACAACTACTACAAA 59.019 33.333 19.62 2.45 43.19 2.83
52 53 7.490840 TGTTGCTACTGTTACAACTACTACAA 58.509 34.615 19.62 2.97 43.19 2.41
53 54 7.013559 TCTGTTGCTACTGTTACAACTACTACA 59.986 37.037 19.62 5.42 43.19 2.74
54 55 7.365741 TCTGTTGCTACTGTTACAACTACTAC 58.634 38.462 19.62 2.01 43.19 2.73
55 56 7.514784 TCTGTTGCTACTGTTACAACTACTA 57.485 36.000 19.62 5.66 43.19 1.82
56 57 6.401047 TCTGTTGCTACTGTTACAACTACT 57.599 37.500 19.62 0.00 43.19 2.57
57 58 7.473027 TTTCTGTTGCTACTGTTACAACTAC 57.527 36.000 19.62 3.08 43.19 2.73
58 59 7.767198 ACTTTTCTGTTGCTACTGTTACAACTA 59.233 33.333 19.62 10.13 43.19 2.24
59 60 6.598064 ACTTTTCTGTTGCTACTGTTACAACT 59.402 34.615 19.62 2.97 43.19 3.16
60 61 6.782150 ACTTTTCTGTTGCTACTGTTACAAC 58.218 36.000 14.91 14.91 43.10 3.32
61 62 6.995511 ACTTTTCTGTTGCTACTGTTACAA 57.004 33.333 0.00 0.00 0.00 2.41
62 63 8.495361 TTTACTTTTCTGTTGCTACTGTTACA 57.505 30.769 0.00 0.00 0.00 2.41
65 66 8.784043 CCTATTTACTTTTCTGTTGCTACTGTT 58.216 33.333 0.00 0.00 0.00 3.16
66 67 7.094762 GCCTATTTACTTTTCTGTTGCTACTGT 60.095 37.037 0.00 0.00 0.00 3.55
67 68 7.244192 GCCTATTTACTTTTCTGTTGCTACTG 58.756 38.462 0.00 0.00 0.00 2.74
68 69 6.092259 CGCCTATTTACTTTTCTGTTGCTACT 59.908 38.462 0.00 0.00 0.00 2.57
69 70 6.091713 TCGCCTATTTACTTTTCTGTTGCTAC 59.908 38.462 0.00 0.00 0.00 3.58
70 71 6.167685 TCGCCTATTTACTTTTCTGTTGCTA 58.832 36.000 0.00 0.00 0.00 3.49
71 72 5.001232 TCGCCTATTTACTTTTCTGTTGCT 58.999 37.500 0.00 0.00 0.00 3.91
72 73 5.291293 TCGCCTATTTACTTTTCTGTTGC 57.709 39.130 0.00 0.00 0.00 4.17
73 74 7.129109 TCTTCGCCTATTTACTTTTCTGTTG 57.871 36.000 0.00 0.00 0.00 3.33
74 75 7.227910 TGTTCTTCGCCTATTTACTTTTCTGTT 59.772 33.333 0.00 0.00 0.00 3.16
75 76 6.708949 TGTTCTTCGCCTATTTACTTTTCTGT 59.291 34.615 0.00 0.00 0.00 3.41
76 77 7.129109 TGTTCTTCGCCTATTTACTTTTCTG 57.871 36.000 0.00 0.00 0.00 3.02
77 78 7.739498 TTGTTCTTCGCCTATTTACTTTTCT 57.261 32.000 0.00 0.00 0.00 2.52
80 81 9.174166 ACATATTGTTCTTCGCCTATTTACTTT 57.826 29.630 0.00 0.00 0.00 2.66
81 82 8.612619 CACATATTGTTCTTCGCCTATTTACTT 58.387 33.333 0.00 0.00 0.00 2.24
82 83 7.985184 TCACATATTGTTCTTCGCCTATTTACT 59.015 33.333 0.00 0.00 0.00 2.24
83 84 8.138365 TCACATATTGTTCTTCGCCTATTTAC 57.862 34.615 0.00 0.00 0.00 2.01
84 85 8.725405 TTCACATATTGTTCTTCGCCTATTTA 57.275 30.769 0.00 0.00 0.00 1.40
85 86 7.624360 TTCACATATTGTTCTTCGCCTATTT 57.376 32.000 0.00 0.00 0.00 1.40
86 87 7.624360 TTTCACATATTGTTCTTCGCCTATT 57.376 32.000 0.00 0.00 0.00 1.73
87 88 7.624360 TTTTCACATATTGTTCTTCGCCTAT 57.376 32.000 0.00 0.00 0.00 2.57
88 89 6.403200 GCTTTTCACATATTGTTCTTCGCCTA 60.403 38.462 0.00 0.00 0.00 3.93
89 90 5.619981 GCTTTTCACATATTGTTCTTCGCCT 60.620 40.000 0.00 0.00 0.00 5.52
90 91 4.558860 GCTTTTCACATATTGTTCTTCGCC 59.441 41.667 0.00 0.00 0.00 5.54
91 92 5.393962 AGCTTTTCACATATTGTTCTTCGC 58.606 37.500 0.00 0.00 0.00 4.70
92 93 5.729883 CGAGCTTTTCACATATTGTTCTTCG 59.270 40.000 0.00 0.00 0.00 3.79
93 94 6.603095 ACGAGCTTTTCACATATTGTTCTTC 58.397 36.000 0.00 0.00 0.00 2.87
94 95 6.560253 ACGAGCTTTTCACATATTGTTCTT 57.440 33.333 0.00 0.00 0.00 2.52
95 96 7.063544 GTCTACGAGCTTTTCACATATTGTTCT 59.936 37.037 0.00 0.00 0.00 3.01
96 97 7.148639 TGTCTACGAGCTTTTCACATATTGTTC 60.149 37.037 0.00 0.00 0.00 3.18
97 98 6.649141 TGTCTACGAGCTTTTCACATATTGTT 59.351 34.615 0.00 0.00 0.00 2.83
98 99 6.163476 TGTCTACGAGCTTTTCACATATTGT 58.837 36.000 0.00 0.00 0.00 2.71
99 100 6.647212 TGTCTACGAGCTTTTCACATATTG 57.353 37.500 0.00 0.00 0.00 1.90
100 101 7.201644 CCATTGTCTACGAGCTTTTCACATATT 60.202 37.037 0.00 0.00 0.00 1.28
101 102 6.258727 CCATTGTCTACGAGCTTTTCACATAT 59.741 38.462 0.00 0.00 0.00 1.78
102 103 5.580691 CCATTGTCTACGAGCTTTTCACATA 59.419 40.000 0.00 0.00 0.00 2.29
103 104 4.393062 CCATTGTCTACGAGCTTTTCACAT 59.607 41.667 0.00 0.00 0.00 3.21
104 105 3.745975 CCATTGTCTACGAGCTTTTCACA 59.254 43.478 0.00 0.00 0.00 3.58
105 106 3.994392 TCCATTGTCTACGAGCTTTTCAC 59.006 43.478 0.00 0.00 0.00 3.18
106 107 4.265904 TCCATTGTCTACGAGCTTTTCA 57.734 40.909 0.00 0.00 0.00 2.69
107 108 4.026475 CGATCCATTGTCTACGAGCTTTTC 60.026 45.833 0.00 0.00 0.00 2.29
108 109 3.865745 CGATCCATTGTCTACGAGCTTTT 59.134 43.478 0.00 0.00 0.00 2.27
109 110 3.448686 CGATCCATTGTCTACGAGCTTT 58.551 45.455 0.00 0.00 0.00 3.51
110 111 2.799917 GCGATCCATTGTCTACGAGCTT 60.800 50.000 0.00 0.00 0.00 3.74
111 112 1.269309 GCGATCCATTGTCTACGAGCT 60.269 52.381 0.00 0.00 0.00 4.09
112 113 1.132588 GCGATCCATTGTCTACGAGC 58.867 55.000 0.00 0.00 0.00 5.03
113 114 2.033424 TCAGCGATCCATTGTCTACGAG 59.967 50.000 0.00 0.00 0.00 4.18
114 115 2.021457 TCAGCGATCCATTGTCTACGA 58.979 47.619 0.00 0.00 0.00 3.43
115 116 2.492019 TCAGCGATCCATTGTCTACG 57.508 50.000 0.00 0.00 0.00 3.51
116 117 3.062763 CCATCAGCGATCCATTGTCTAC 58.937 50.000 0.00 0.00 0.00 2.59
117 118 2.965147 TCCATCAGCGATCCATTGTCTA 59.035 45.455 0.00 0.00 0.00 2.59
118 119 1.764723 TCCATCAGCGATCCATTGTCT 59.235 47.619 0.00 0.00 0.00 3.41
119 120 2.245159 TCCATCAGCGATCCATTGTC 57.755 50.000 0.00 0.00 0.00 3.18
120 121 2.945080 ATCCATCAGCGATCCATTGT 57.055 45.000 0.00 0.00 0.00 2.71
121 122 5.892160 AATTATCCATCAGCGATCCATTG 57.108 39.130 0.00 0.00 0.00 2.82
122 123 6.039047 GCATAATTATCCATCAGCGATCCATT 59.961 38.462 0.00 0.00 0.00 3.16
123 124 5.530171 GCATAATTATCCATCAGCGATCCAT 59.470 40.000 0.00 0.00 0.00 3.41
124 125 4.877823 GCATAATTATCCATCAGCGATCCA 59.122 41.667 0.00 0.00 0.00 3.41
125 126 4.274459 GGCATAATTATCCATCAGCGATCC 59.726 45.833 0.00 0.00 0.00 3.36
126 127 4.025396 CGGCATAATTATCCATCAGCGATC 60.025 45.833 0.00 0.00 0.00 3.69
127 128 3.873361 CGGCATAATTATCCATCAGCGAT 59.127 43.478 0.00 0.00 0.00 4.58
128 129 3.261580 CGGCATAATTATCCATCAGCGA 58.738 45.455 0.00 0.00 0.00 4.93
129 130 2.352651 CCGGCATAATTATCCATCAGCG 59.647 50.000 0.00 0.00 0.00 5.18
130 131 3.609853 TCCGGCATAATTATCCATCAGC 58.390 45.455 0.00 0.00 0.00 4.26
131 132 4.036027 GCATCCGGCATAATTATCCATCAG 59.964 45.833 0.00 0.00 43.97 2.90
132 133 3.947196 GCATCCGGCATAATTATCCATCA 59.053 43.478 0.00 0.00 43.97 3.07
133 134 3.002656 CGCATCCGGCATAATTATCCATC 59.997 47.826 0.00 0.00 45.17 3.51
134 135 2.945008 CGCATCCGGCATAATTATCCAT 59.055 45.455 0.00 0.00 45.17 3.41
135 136 2.027653 TCGCATCCGGCATAATTATCCA 60.028 45.455 0.00 0.00 45.17 3.41
136 137 2.627945 TCGCATCCGGCATAATTATCC 58.372 47.619 0.00 0.03 45.17 2.59
137 138 4.260784 GGAATCGCATCCGGCATAATTATC 60.261 45.833 0.00 0.00 45.17 1.75
138 139 3.627577 GGAATCGCATCCGGCATAATTAT 59.372 43.478 0.00 0.00 45.17 1.28
139 140 3.006940 GGAATCGCATCCGGCATAATTA 58.993 45.455 0.00 0.00 45.17 1.40
140 141 1.812571 GGAATCGCATCCGGCATAATT 59.187 47.619 0.00 0.00 45.17 1.40
141 142 1.003580 AGGAATCGCATCCGGCATAAT 59.996 47.619 0.00 0.00 44.60 1.28
142 143 0.396435 AGGAATCGCATCCGGCATAA 59.604 50.000 0.00 0.00 44.60 1.90
143 144 0.037326 GAGGAATCGCATCCGGCATA 60.037 55.000 0.00 0.00 44.60 3.14
144 145 1.302033 GAGGAATCGCATCCGGCAT 60.302 57.895 0.00 0.00 44.60 4.40
145 146 2.043604 ATGAGGAATCGCATCCGGCA 62.044 55.000 0.00 4.62 44.60 5.69
146 147 1.302033 ATGAGGAATCGCATCCGGC 60.302 57.895 0.00 0.00 44.60 6.13
147 148 1.572085 GCATGAGGAATCGCATCCGG 61.572 60.000 0.00 0.00 44.60 5.14
148 149 0.881600 TGCATGAGGAATCGCATCCG 60.882 55.000 0.00 0.00 44.60 4.18
149 150 1.311859 TTGCATGAGGAATCGCATCC 58.688 50.000 0.00 0.00 39.96 3.51
150 151 3.425892 GCTATTGCATGAGGAATCGCATC 60.426 47.826 0.00 0.00 41.70 3.91
151 152 2.486982 GCTATTGCATGAGGAATCGCAT 59.513 45.455 0.00 0.00 41.70 4.73
152 153 1.875514 GCTATTGCATGAGGAATCGCA 59.124 47.619 0.00 0.00 41.70 5.10
153 154 2.149578 AGCTATTGCATGAGGAATCGC 58.850 47.619 0.00 0.00 42.17 4.58
154 155 7.601073 TTTATAGCTATTGCATGAGGAATCG 57.399 36.000 12.39 0.00 42.74 3.34
157 158 9.453572 CCTATTTTATAGCTATTGCATGAGGAA 57.546 33.333 12.39 0.00 42.74 3.36
158 159 8.605947 ACCTATTTTATAGCTATTGCATGAGGA 58.394 33.333 12.39 0.00 42.74 3.71
159 160 8.798859 ACCTATTTTATAGCTATTGCATGAGG 57.201 34.615 12.39 13.55 42.74 3.86
161 162 9.791801 TCAACCTATTTTATAGCTATTGCATGA 57.208 29.630 12.39 2.68 42.74 3.07
177 178 9.381038 TGGAGCTAGTTCTATATCAACCTATTT 57.619 33.333 6.54 0.00 0.00 1.40
178 179 8.958060 TGGAGCTAGTTCTATATCAACCTATT 57.042 34.615 6.54 0.00 0.00 1.73
179 180 8.958060 TTGGAGCTAGTTCTATATCAACCTAT 57.042 34.615 6.54 0.00 0.00 2.57
180 181 8.958060 ATTGGAGCTAGTTCTATATCAACCTA 57.042 34.615 6.54 0.00 0.00 3.08
181 182 7.863901 ATTGGAGCTAGTTCTATATCAACCT 57.136 36.000 6.54 0.00 0.00 3.50
182 183 8.150945 TGAATTGGAGCTAGTTCTATATCAACC 58.849 37.037 6.54 0.00 0.00 3.77
183 184 9.717942 ATGAATTGGAGCTAGTTCTATATCAAC 57.282 33.333 6.54 0.00 0.00 3.18
184 185 9.935241 GATGAATTGGAGCTAGTTCTATATCAA 57.065 33.333 6.54 2.54 0.00 2.57
185 186 9.093458 TGATGAATTGGAGCTAGTTCTATATCA 57.907 33.333 6.54 8.25 0.00 2.15
186 187 9.935241 TTGATGAATTGGAGCTAGTTCTATATC 57.065 33.333 6.54 3.14 0.00 1.63
188 189 9.716531 CATTGATGAATTGGAGCTAGTTCTATA 57.283 33.333 6.54 0.00 0.00 1.31
189 190 8.216423 ACATTGATGAATTGGAGCTAGTTCTAT 58.784 33.333 6.54 0.00 0.00 1.98
190 191 7.568349 ACATTGATGAATTGGAGCTAGTTCTA 58.432 34.615 6.54 0.00 0.00 2.10
191 192 6.421485 ACATTGATGAATTGGAGCTAGTTCT 58.579 36.000 6.54 0.00 0.00 3.01
192 193 6.690194 ACATTGATGAATTGGAGCTAGTTC 57.310 37.500 0.00 0.00 0.00 3.01
193 194 8.627403 CATTACATTGATGAATTGGAGCTAGTT 58.373 33.333 0.00 0.00 0.00 2.24
194 195 7.776969 ACATTACATTGATGAATTGGAGCTAGT 59.223 33.333 0.00 0.00 0.00 2.57
195 196 8.162878 ACATTACATTGATGAATTGGAGCTAG 57.837 34.615 0.00 0.00 0.00 3.42
196 197 9.276590 CTACATTACATTGATGAATTGGAGCTA 57.723 33.333 0.00 0.00 0.00 3.32
197 198 7.230108 CCTACATTACATTGATGAATTGGAGCT 59.770 37.037 0.00 0.00 0.00 4.09
198 199 7.365741 CCTACATTACATTGATGAATTGGAGC 58.634 38.462 0.00 0.00 0.00 4.70
199 200 7.013559 TGCCTACATTACATTGATGAATTGGAG 59.986 37.037 0.00 0.00 0.00 3.86
200 201 6.832900 TGCCTACATTACATTGATGAATTGGA 59.167 34.615 0.00 0.00 0.00 3.53
201 202 7.041635 TGCCTACATTACATTGATGAATTGG 57.958 36.000 0.00 0.00 0.00 3.16
202 203 8.139350 ACATGCCTACATTACATTGATGAATTG 58.861 33.333 0.00 0.00 32.87 2.32
203 204 8.241497 ACATGCCTACATTACATTGATGAATT 57.759 30.769 0.00 0.00 32.87 2.17
204 205 7.828508 ACATGCCTACATTACATTGATGAAT 57.171 32.000 0.00 0.00 32.87 2.57
205 206 8.922931 ATACATGCCTACATTACATTGATGAA 57.077 30.769 0.00 0.00 32.87 2.57
206 207 8.922931 AATACATGCCTACATTACATTGATGA 57.077 30.769 0.00 0.00 32.87 2.92
207 208 8.239314 GGAATACATGCCTACATTACATTGATG 58.761 37.037 0.00 0.00 32.87 3.07
208 209 7.119699 CGGAATACATGCCTACATTACATTGAT 59.880 37.037 0.00 0.00 32.87 2.57
209 210 6.426633 CGGAATACATGCCTACATTACATTGA 59.573 38.462 0.00 0.00 32.87 2.57
210 211 6.204688 ACGGAATACATGCCTACATTACATTG 59.795 38.462 0.00 0.00 32.87 2.82
211 212 6.296026 ACGGAATACATGCCTACATTACATT 58.704 36.000 0.00 0.00 32.87 2.71
212 213 5.865085 ACGGAATACATGCCTACATTACAT 58.135 37.500 0.00 0.00 32.87 2.29
213 214 5.284861 ACGGAATACATGCCTACATTACA 57.715 39.130 0.00 0.00 32.87 2.41
214 215 7.718272 TTTACGGAATACATGCCTACATTAC 57.282 36.000 0.00 0.00 32.87 1.89
215 216 9.647797 CTATTTACGGAATACATGCCTACATTA 57.352 33.333 0.00 0.00 32.87 1.90
216 217 8.154856 ACTATTTACGGAATACATGCCTACATT 58.845 33.333 0.00 0.00 32.87 2.71
217 218 7.676947 ACTATTTACGGAATACATGCCTACAT 58.323 34.615 0.00 0.00 36.79 2.29
218 219 7.058023 ACTATTTACGGAATACATGCCTACA 57.942 36.000 0.00 0.00 0.00 2.74
219 220 7.149973 TGACTATTTACGGAATACATGCCTAC 58.850 38.462 0.00 0.00 0.00 3.18
220 221 7.292713 TGACTATTTACGGAATACATGCCTA 57.707 36.000 0.00 0.00 0.00 3.93
221 222 6.169557 TGACTATTTACGGAATACATGCCT 57.830 37.500 0.00 0.00 0.00 4.75
222 223 7.201410 CGTATGACTATTTACGGAATACATGCC 60.201 40.741 0.00 0.00 37.98 4.40
223 224 7.327761 ACGTATGACTATTTACGGAATACATGC 59.672 37.037 7.31 0.00 44.08 4.06
224 225 8.635983 CACGTATGACTATTTACGGAATACATG 58.364 37.037 7.31 0.00 44.08 3.21
225 226 7.327761 GCACGTATGACTATTTACGGAATACAT 59.672 37.037 7.31 0.00 44.08 2.29
226 227 6.638063 GCACGTATGACTATTTACGGAATACA 59.362 38.462 7.31 0.00 44.08 2.29
227 228 6.860023 AGCACGTATGACTATTTACGGAATAC 59.140 38.462 7.31 0.00 44.08 1.89
228 229 6.973843 AGCACGTATGACTATTTACGGAATA 58.026 36.000 7.31 0.00 44.08 1.75
229 230 5.839621 AGCACGTATGACTATTTACGGAAT 58.160 37.500 7.31 0.00 44.08 3.01
230 231 5.252969 AGCACGTATGACTATTTACGGAA 57.747 39.130 7.31 0.00 44.08 4.30
231 232 4.906065 AGCACGTATGACTATTTACGGA 57.094 40.909 7.31 0.00 44.08 4.69
232 233 6.089016 CCATAAGCACGTATGACTATTTACGG 59.911 42.308 5.32 0.00 44.08 4.02
233 234 6.859508 TCCATAAGCACGTATGACTATTTACG 59.140 38.462 5.32 1.33 45.02 3.18
234 235 8.583810 TTCCATAAGCACGTATGACTATTTAC 57.416 34.615 5.32 0.00 33.97 2.01
235 236 9.602568 TTTTCCATAAGCACGTATGACTATTTA 57.397 29.630 5.32 0.00 33.97 1.40
236 237 8.500753 TTTTCCATAAGCACGTATGACTATTT 57.499 30.769 5.32 0.00 33.97 1.40
237 238 7.985184 TCTTTTCCATAAGCACGTATGACTATT 59.015 33.333 5.32 0.00 33.97 1.73
238 239 7.497595 TCTTTTCCATAAGCACGTATGACTAT 58.502 34.615 5.32 0.00 33.97 2.12
239 240 6.869695 TCTTTTCCATAAGCACGTATGACTA 58.130 36.000 5.32 0.00 33.97 2.59
240 241 5.730550 TCTTTTCCATAAGCACGTATGACT 58.269 37.500 5.32 0.00 33.97 3.41
241 242 6.092259 AGTTCTTTTCCATAAGCACGTATGAC 59.908 38.462 5.32 0.00 33.97 3.06
242 243 6.170506 AGTTCTTTTCCATAAGCACGTATGA 58.829 36.000 5.32 0.00 33.97 2.15
243 244 6.422776 AGTTCTTTTCCATAAGCACGTATG 57.577 37.500 0.00 0.00 0.00 2.39
244 245 6.430000 ACAAGTTCTTTTCCATAAGCACGTAT 59.570 34.615 0.00 0.00 0.00 3.06
245 246 5.761234 ACAAGTTCTTTTCCATAAGCACGTA 59.239 36.000 0.00 0.00 0.00 3.57
246 247 4.578928 ACAAGTTCTTTTCCATAAGCACGT 59.421 37.500 0.00 0.00 0.00 4.49
247 248 5.108385 ACAAGTTCTTTTCCATAAGCACG 57.892 39.130 0.00 0.00 0.00 5.34
248 249 7.750903 GTCATACAAGTTCTTTTCCATAAGCAC 59.249 37.037 0.00 0.00 0.00 4.40
249 250 7.360861 CGTCATACAAGTTCTTTTCCATAAGCA 60.361 37.037 0.00 0.00 0.00 3.91
250 251 6.961554 CGTCATACAAGTTCTTTTCCATAAGC 59.038 38.462 0.00 0.00 0.00 3.09
251 252 8.029642 ACGTCATACAAGTTCTTTTCCATAAG 57.970 34.615 0.00 0.00 0.00 1.73
252 253 7.972832 ACGTCATACAAGTTCTTTTCCATAA 57.027 32.000 0.00 0.00 0.00 1.90
254 255 9.832445 ATATACGTCATACAAGTTCTTTTCCAT 57.168 29.630 0.00 0.00 0.00 3.41
255 256 9.661563 AATATACGTCATACAAGTTCTTTTCCA 57.338 29.630 0.00 0.00 0.00 3.53
256 257 9.916397 CAATATACGTCATACAAGTTCTTTTCC 57.084 33.333 0.00 0.00 0.00 3.13
259 260 9.095065 GGACAATATACGTCATACAAGTTCTTT 57.905 33.333 0.00 0.00 34.97 2.52
260 261 8.475639 AGGACAATATACGTCATACAAGTTCTT 58.524 33.333 0.00 0.00 34.97 2.52
261 262 8.008513 AGGACAATATACGTCATACAAGTTCT 57.991 34.615 0.00 0.00 34.97 3.01
262 263 9.178427 GTAGGACAATATACGTCATACAAGTTC 57.822 37.037 18.13 0.00 45.38 3.01
263 264 8.139989 GGTAGGACAATATACGTCATACAAGTT 58.860 37.037 21.74 0.00 46.96 2.66
264 265 7.255730 GGGTAGGACAATATACGTCATACAAGT 60.256 40.741 21.74 0.00 46.96 3.16
265 266 7.039923 AGGGTAGGACAATATACGTCATACAAG 60.040 40.741 21.74 0.00 46.96 3.16
266 267 6.779049 AGGGTAGGACAATATACGTCATACAA 59.221 38.462 21.74 0.00 46.96 2.41
267 268 6.309357 AGGGTAGGACAATATACGTCATACA 58.691 40.000 21.74 0.00 46.96 2.29
268 269 6.127786 GGAGGGTAGGACAATATACGTCATAC 60.128 46.154 16.13 16.13 45.35 2.39
269 270 5.948162 GGAGGGTAGGACAATATACGTCATA 59.052 44.000 0.00 2.51 34.97 2.15
270 271 4.771054 GGAGGGTAGGACAATATACGTCAT 59.229 45.833 0.00 3.34 34.97 3.06
271 272 4.147321 GGAGGGTAGGACAATATACGTCA 58.853 47.826 0.00 0.00 34.97 4.35
272 273 3.509184 GGGAGGGTAGGACAATATACGTC 59.491 52.174 0.00 0.00 0.00 4.34
273 274 3.117016 TGGGAGGGTAGGACAATATACGT 60.117 47.826 0.00 0.00 0.00 3.57
274 275 3.503365 TGGGAGGGTAGGACAATATACG 58.497 50.000 0.00 0.00 0.00 3.06
275 276 5.803470 GCAATGGGAGGGTAGGACAATATAC 60.803 48.000 0.00 0.00 0.00 1.47
276 277 4.288626 GCAATGGGAGGGTAGGACAATATA 59.711 45.833 0.00 0.00 0.00 0.86
277 278 3.074538 GCAATGGGAGGGTAGGACAATAT 59.925 47.826 0.00 0.00 0.00 1.28
278 279 2.441750 GCAATGGGAGGGTAGGACAATA 59.558 50.000 0.00 0.00 0.00 1.90
279 280 1.215423 GCAATGGGAGGGTAGGACAAT 59.785 52.381 0.00 0.00 0.00 2.71
280 281 0.623723 GCAATGGGAGGGTAGGACAA 59.376 55.000 0.00 0.00 0.00 3.18
281 282 0.548926 TGCAATGGGAGGGTAGGACA 60.549 55.000 0.00 0.00 0.00 4.02
282 283 0.181350 CTGCAATGGGAGGGTAGGAC 59.819 60.000 0.00 0.00 0.00 3.85
283 284 1.635817 GCTGCAATGGGAGGGTAGGA 61.636 60.000 0.00 0.00 32.28 2.94
284 285 1.152881 GCTGCAATGGGAGGGTAGG 60.153 63.158 0.00 0.00 32.28 3.18
285 286 1.524621 CGCTGCAATGGGAGGGTAG 60.525 63.158 0.00 0.00 39.98 3.18
286 287 2.589540 CGCTGCAATGGGAGGGTA 59.410 61.111 0.00 0.00 39.98 3.69
287 288 4.431131 CCGCTGCAATGGGAGGGT 62.431 66.667 4.94 0.00 42.72 4.34
293 294 2.550699 TAAGGACCCCGCTGCAATGG 62.551 60.000 0.00 0.00 0.00 3.16
294 295 1.077787 TAAGGACCCCGCTGCAATG 60.078 57.895 0.00 0.00 0.00 2.82
295 296 1.077716 GTAAGGACCCCGCTGCAAT 60.078 57.895 0.00 0.00 0.00 3.56
296 297 2.349755 GTAAGGACCCCGCTGCAA 59.650 61.111 0.00 0.00 0.00 4.08
297 298 4.077184 CGTAAGGACCCCGCTGCA 62.077 66.667 0.00 0.00 0.00 4.41
309 310 8.427276 ACCTTAATATCCCTTAGTTTCCGTAAG 58.573 37.037 0.00 0.00 0.00 2.34
310 311 8.322905 ACCTTAATATCCCTTAGTTTCCGTAA 57.677 34.615 0.00 0.00 0.00 3.18
311 312 7.786464 AGACCTTAATATCCCTTAGTTTCCGTA 59.214 37.037 0.00 0.00 0.00 4.02
312 313 6.614496 AGACCTTAATATCCCTTAGTTTCCGT 59.386 38.462 0.00 0.00 0.00 4.69
313 314 7.063934 AGACCTTAATATCCCTTAGTTTCCG 57.936 40.000 0.00 0.00 0.00 4.30
314 315 7.292827 AGGAGACCTTAATATCCCTTAGTTTCC 59.707 40.741 0.00 0.00 29.54 3.13
315 316 8.265108 AGGAGACCTTAATATCCCTTAGTTTC 57.735 38.462 0.00 0.00 29.54 2.78
316 317 8.640033 AAGGAGACCTTAATATCCCTTAGTTT 57.360 34.615 0.86 0.00 42.74 2.66
317 318 8.640033 AAAGGAGACCTTAATATCCCTTAGTT 57.360 34.615 3.40 0.00 43.92 2.24
318 319 8.640033 AAAAGGAGACCTTAATATCCCTTAGT 57.360 34.615 3.40 0.00 43.92 2.24
329 330 8.255905 CGGTTCTCTATTAAAAGGAGACCTTAA 58.744 37.037 3.40 0.00 43.92 1.85
330 331 7.147776 CCGGTTCTCTATTAAAAGGAGACCTTA 60.148 40.741 3.40 0.00 43.92 2.69
332 333 5.128991 CCGGTTCTCTATTAAAAGGAGACCT 59.871 44.000 0.00 0.00 36.08 3.85
333 334 5.128335 TCCGGTTCTCTATTAAAAGGAGACC 59.872 44.000 0.00 8.41 36.08 3.85
334 335 6.041511 GTCCGGTTCTCTATTAAAAGGAGAC 58.958 44.000 0.00 0.00 36.08 3.36
335 336 5.128335 GGTCCGGTTCTCTATTAAAAGGAGA 59.872 44.000 0.00 0.00 34.77 3.71
336 337 5.105064 TGGTCCGGTTCTCTATTAAAAGGAG 60.105 44.000 0.00 0.00 0.00 3.69
337 338 4.778958 TGGTCCGGTTCTCTATTAAAAGGA 59.221 41.667 0.00 0.00 0.00 3.36
338 339 5.093849 TGGTCCGGTTCTCTATTAAAAGG 57.906 43.478 0.00 0.00 0.00 3.11
339 340 6.403309 GCTTTGGTCCGGTTCTCTATTAAAAG 60.403 42.308 0.00 1.08 0.00 2.27
340 341 5.413523 GCTTTGGTCCGGTTCTCTATTAAAA 59.586 40.000 0.00 0.00 0.00 1.52
341 342 4.939439 GCTTTGGTCCGGTTCTCTATTAAA 59.061 41.667 0.00 0.00 0.00 1.52
342 343 4.020039 TGCTTTGGTCCGGTTCTCTATTAA 60.020 41.667 0.00 0.00 0.00 1.40
343 344 3.516300 TGCTTTGGTCCGGTTCTCTATTA 59.484 43.478 0.00 0.00 0.00 0.98
344 345 2.304761 TGCTTTGGTCCGGTTCTCTATT 59.695 45.455 0.00 0.00 0.00 1.73
345 346 1.906574 TGCTTTGGTCCGGTTCTCTAT 59.093 47.619 0.00 0.00 0.00 1.98
346 347 1.344065 TGCTTTGGTCCGGTTCTCTA 58.656 50.000 0.00 0.00 0.00 2.43
347 348 0.693049 ATGCTTTGGTCCGGTTCTCT 59.307 50.000 0.00 0.00 0.00 3.10
348 349 1.534729 AATGCTTTGGTCCGGTTCTC 58.465 50.000 0.00 0.00 0.00 2.87
349 350 2.817844 GTTAATGCTTTGGTCCGGTTCT 59.182 45.455 0.00 0.00 0.00 3.01
350 351 2.554893 TGTTAATGCTTTGGTCCGGTTC 59.445 45.455 0.00 0.00 0.00 3.62
351 352 2.295070 GTGTTAATGCTTTGGTCCGGTT 59.705 45.455 0.00 0.00 0.00 4.44
352 353 1.883926 GTGTTAATGCTTTGGTCCGGT 59.116 47.619 0.00 0.00 0.00 5.28
353 354 1.883275 TGTGTTAATGCTTTGGTCCGG 59.117 47.619 0.00 0.00 0.00 5.14
354 355 3.848272 ATGTGTTAATGCTTTGGTCCG 57.152 42.857 0.00 0.00 0.00 4.79
355 356 5.414454 TCACTATGTGTTAATGCTTTGGTCC 59.586 40.000 0.00 0.00 34.79 4.46
356 357 6.494893 TCACTATGTGTTAATGCTTTGGTC 57.505 37.500 0.00 0.00 34.79 4.02
357 358 6.892658 TTCACTATGTGTTAATGCTTTGGT 57.107 33.333 0.00 0.00 34.79 3.67
358 359 8.458052 TGTATTCACTATGTGTTAATGCTTTGG 58.542 33.333 0.00 0.00 34.79 3.28
361 362 9.394767 TCATGTATTCACTATGTGTTAATGCTT 57.605 29.630 0.00 0.00 34.79 3.91
362 363 8.962884 TCATGTATTCACTATGTGTTAATGCT 57.037 30.769 0.00 0.00 34.79 3.79
363 364 9.438291 GTTCATGTATTCACTATGTGTTAATGC 57.562 33.333 0.00 0.00 34.79 3.56
366 367 9.378551 GGAGTTCATGTATTCACTATGTGTTAA 57.621 33.333 0.00 0.00 34.79 2.01
367 368 8.758829 AGGAGTTCATGTATTCACTATGTGTTA 58.241 33.333 0.00 0.00 34.79 2.41
368 369 7.624549 AGGAGTTCATGTATTCACTATGTGTT 58.375 34.615 0.00 0.00 34.79 3.32
369 370 7.093333 TGAGGAGTTCATGTATTCACTATGTGT 60.093 37.037 0.00 0.00 34.79 3.72
370 371 7.267857 TGAGGAGTTCATGTATTCACTATGTG 58.732 38.462 0.00 0.00 34.45 3.21
371 372 7.423844 TGAGGAGTTCATGTATTCACTATGT 57.576 36.000 0.00 0.00 0.00 2.29
372 373 8.607459 GTTTGAGGAGTTCATGTATTCACTATG 58.393 37.037 0.00 0.00 35.27 2.23
373 374 8.543774 AGTTTGAGGAGTTCATGTATTCACTAT 58.456 33.333 0.00 0.00 35.27 2.12
374 375 7.907389 AGTTTGAGGAGTTCATGTATTCACTA 58.093 34.615 0.00 0.00 35.27 2.74
375 376 6.773638 AGTTTGAGGAGTTCATGTATTCACT 58.226 36.000 0.00 0.00 35.27 3.41
376 377 7.201444 CGTAGTTTGAGGAGTTCATGTATTCAC 60.201 40.741 0.00 0.00 35.27 3.18
377 378 6.811665 CGTAGTTTGAGGAGTTCATGTATTCA 59.188 38.462 0.00 0.00 35.27 2.57
378 379 6.255887 CCGTAGTTTGAGGAGTTCATGTATTC 59.744 42.308 0.00 0.00 35.27 1.75
379 380 6.106673 CCGTAGTTTGAGGAGTTCATGTATT 58.893 40.000 0.00 0.00 35.27 1.89
380 381 5.187186 ACCGTAGTTTGAGGAGTTCATGTAT 59.813 40.000 0.00 0.00 35.27 2.29
381 382 4.525487 ACCGTAGTTTGAGGAGTTCATGTA 59.475 41.667 0.00 0.00 35.27 2.29
382 383 3.323979 ACCGTAGTTTGAGGAGTTCATGT 59.676 43.478 0.00 0.00 35.27 3.21
383 384 3.926616 ACCGTAGTTTGAGGAGTTCATG 58.073 45.455 0.00 0.00 35.27 3.07
384 385 3.576982 TGACCGTAGTTTGAGGAGTTCAT 59.423 43.478 0.00 0.00 35.27 2.57
385 386 2.960384 TGACCGTAGTTTGAGGAGTTCA 59.040 45.455 0.00 0.00 0.00 3.18
386 387 3.655276 TGACCGTAGTTTGAGGAGTTC 57.345 47.619 0.00 0.00 0.00 3.01
387 388 3.576982 TGATGACCGTAGTTTGAGGAGTT 59.423 43.478 0.00 0.00 0.00 3.01
388 389 3.056749 GTGATGACCGTAGTTTGAGGAGT 60.057 47.826 0.00 0.00 0.00 3.85
389 390 3.512680 GTGATGACCGTAGTTTGAGGAG 58.487 50.000 0.00 0.00 0.00 3.69
390 391 2.232941 GGTGATGACCGTAGTTTGAGGA 59.767 50.000 0.00 0.00 30.61 3.71
391 392 2.618053 GGTGATGACCGTAGTTTGAGG 58.382 52.381 0.00 0.00 30.61 3.86
402 403 2.036089 GGGATACTTCTCGGTGATGACC 59.964 54.545 0.00 0.00 39.14 4.02
403 404 2.287668 CGGGATACTTCTCGGTGATGAC 60.288 54.545 0.69 0.00 42.33 3.06
404 405 1.954382 CGGGATACTTCTCGGTGATGA 59.046 52.381 0.69 0.00 42.33 2.92
405 406 1.954382 TCGGGATACTTCTCGGTGATG 59.046 52.381 0.00 0.00 46.17 3.07
406 407 2.359981 TCGGGATACTTCTCGGTGAT 57.640 50.000 0.00 0.00 46.17 3.06
407 408 2.359981 ATCGGGATACTTCTCGGTGA 57.640 50.000 0.00 0.00 46.17 4.02
408 409 4.785511 ATAATCGGGATACTTCTCGGTG 57.214 45.455 0.00 0.00 38.56 4.94
409 410 4.587684 ACAATAATCGGGATACTTCTCGGT 59.412 41.667 0.00 0.00 42.30 4.69
410 411 5.135508 ACAATAATCGGGATACTTCTCGG 57.864 43.478 0.00 0.00 46.17 4.63
412 413 6.750148 AGTGACAATAATCGGGATACTTCTC 58.250 40.000 0.00 0.00 0.00 2.87
413 414 6.732896 AGTGACAATAATCGGGATACTTCT 57.267 37.500 0.00 0.00 0.00 2.85
414 415 6.144080 CGAAGTGACAATAATCGGGATACTTC 59.856 42.308 0.00 0.00 38.56 3.01
415 416 5.983720 CGAAGTGACAATAATCGGGATACTT 59.016 40.000 0.00 0.00 0.00 2.24
416 417 5.509163 CCGAAGTGACAATAATCGGGATACT 60.509 44.000 7.90 0.00 46.97 2.12
417 418 4.684703 CCGAAGTGACAATAATCGGGATAC 59.315 45.833 7.90 0.00 46.97 2.24
418 419 4.878439 CCGAAGTGACAATAATCGGGATA 58.122 43.478 7.90 0.00 46.97 2.59
419 420 3.728845 CCGAAGTGACAATAATCGGGAT 58.271 45.455 7.90 0.00 46.97 3.85
420 421 3.173668 CCGAAGTGACAATAATCGGGA 57.826 47.619 7.90 0.00 46.97 5.14
423 424 2.901249 ACCCCGAAGTGACAATAATCG 58.099 47.619 0.00 0.00 0.00 3.34
424 425 4.007659 ACAACCCCGAAGTGACAATAATC 58.992 43.478 0.00 0.00 0.00 1.75
425 426 4.007659 GACAACCCCGAAGTGACAATAAT 58.992 43.478 0.00 0.00 0.00 1.28
426 427 3.404899 GACAACCCCGAAGTGACAATAA 58.595 45.455 0.00 0.00 0.00 1.40
427 428 2.610976 CGACAACCCCGAAGTGACAATA 60.611 50.000 0.00 0.00 0.00 1.90
428 429 1.876416 CGACAACCCCGAAGTGACAAT 60.876 52.381 0.00 0.00 0.00 2.71
429 430 0.531090 CGACAACCCCGAAGTGACAA 60.531 55.000 0.00 0.00 0.00 3.18
430 431 1.068417 CGACAACCCCGAAGTGACA 59.932 57.895 0.00 0.00 0.00 3.58
431 432 1.666872 CCGACAACCCCGAAGTGAC 60.667 63.158 0.00 0.00 0.00 3.67
432 433 1.189524 ATCCGACAACCCCGAAGTGA 61.190 55.000 0.00 0.00 0.00 3.41
433 434 0.739813 GATCCGACAACCCCGAAGTG 60.740 60.000 0.00 0.00 0.00 3.16
434 435 1.189524 TGATCCGACAACCCCGAAGT 61.190 55.000 0.00 0.00 0.00 3.01
435 436 0.178068 ATGATCCGACAACCCCGAAG 59.822 55.000 0.00 0.00 0.00 3.79
436 437 1.487300 TATGATCCGACAACCCCGAA 58.513 50.000 0.00 0.00 0.00 4.30
437 438 1.137479 GTTATGATCCGACAACCCCGA 59.863 52.381 0.00 0.00 0.00 5.14
438 439 1.134640 TGTTATGATCCGACAACCCCG 60.135 52.381 0.00 0.00 0.00 5.73
439 440 2.285977 GTGTTATGATCCGACAACCCC 58.714 52.381 0.00 0.00 0.00 4.95
440 441 2.980568 TGTGTTATGATCCGACAACCC 58.019 47.619 0.00 0.00 0.00 4.11
441 442 5.365403 TTTTGTGTTATGATCCGACAACC 57.635 39.130 0.00 0.00 0.00 3.77
442 443 7.148306 ACCTATTTTGTGTTATGATCCGACAAC 60.148 37.037 0.00 0.00 0.00 3.32
443 444 6.882140 ACCTATTTTGTGTTATGATCCGACAA 59.118 34.615 0.00 0.00 0.00 3.18
444 445 6.315144 CACCTATTTTGTGTTATGATCCGACA 59.685 38.462 0.00 0.00 0.00 4.35
445 446 6.537301 TCACCTATTTTGTGTTATGATCCGAC 59.463 38.462 0.00 0.00 35.25 4.79
446 447 6.537301 GTCACCTATTTTGTGTTATGATCCGA 59.463 38.462 0.00 0.00 35.25 4.55
447 448 6.538742 AGTCACCTATTTTGTGTTATGATCCG 59.461 38.462 0.00 0.00 35.25 4.18
448 449 7.865706 AGTCACCTATTTTGTGTTATGATCC 57.134 36.000 0.00 0.00 35.25 3.36
455 456 9.649167 GTAGTGTATAGTCACCTATTTTGTGTT 57.351 33.333 0.00 0.00 38.91 3.32
456 457 9.032624 AGTAGTGTATAGTCACCTATTTTGTGT 57.967 33.333 0.00 0.00 38.91 3.72
464 465 9.925545 TTTTCCATAGTAGTGTATAGTCACCTA 57.074 33.333 0.00 0.00 38.91 3.08
465 466 8.693625 GTTTTCCATAGTAGTGTATAGTCACCT 58.306 37.037 0.00 0.00 38.91 4.00
466 467 7.924947 GGTTTTCCATAGTAGTGTATAGTCACC 59.075 40.741 0.00 0.00 38.21 4.02
467 468 8.693625 AGGTTTTCCATAGTAGTGTATAGTCAC 58.306 37.037 0.00 0.00 43.73 3.67
468 469 8.834004 AGGTTTTCCATAGTAGTGTATAGTCA 57.166 34.615 0.00 0.00 43.73 3.41
500 501 3.187700 CCGCGCTACTGATAAACTTCTT 58.812 45.455 5.56 0.00 0.00 2.52
549 550 6.738453 GCGGTTTTTATACCCCTCGATACTAA 60.738 42.308 0.00 0.00 34.56 2.24
555 556 1.471327 CGCGGTTTTTATACCCCTCGA 60.471 52.381 0.00 0.00 34.56 4.04
587 588 9.530633 GTTTATACCCCTCGCTAATATTATCAG 57.469 37.037 0.00 0.00 0.00 2.90
677 678 3.969899 AGTAGTAGCGCCGGTTTTATAC 58.030 45.455 2.29 0.00 0.00 1.47
755 757 1.073923 GTTGGGATTATGGATCGGGCT 59.926 52.381 0.00 0.00 35.49 5.19
768 770 2.043772 TGGATCGGGGGTTGGGAT 59.956 61.111 0.00 0.00 0.00 3.85
807 824 4.995058 GGGGGTGGGTGGAGTGGA 62.995 72.222 0.00 0.00 0.00 4.02
980 999 1.600636 CCATGACTGGTGTTGGCGT 60.601 57.895 0.00 0.00 37.79 5.68
1056 1075 0.034337 TCGCCAGGAACAGGTTGTAC 59.966 55.000 0.00 0.00 37.31 2.90
1063 1082 0.036010 ATCTTGGTCGCCAGGAACAG 60.036 55.000 13.08 2.52 44.79 3.16
1064 1083 0.321564 CATCTTGGTCGCCAGGAACA 60.322 55.000 13.08 0.00 42.73 3.18
1114 1133 1.863662 GACGACTCCAGCGACTCCAA 61.864 60.000 0.00 0.00 0.00 3.53
1153 1172 2.649034 GTCCAGCACCTCGAACGA 59.351 61.111 0.00 0.00 0.00 3.85
1345 1408 3.329520 ACTGGGTTGCAGGTCACTTTATA 59.670 43.478 0.00 0.00 0.00 0.98
1346 1409 2.108250 ACTGGGTTGCAGGTCACTTTAT 59.892 45.455 0.00 0.00 0.00 1.40
1347 1410 1.493022 ACTGGGTTGCAGGTCACTTTA 59.507 47.619 0.00 0.00 0.00 1.85
1365 1428 6.665248 TCTTGATCGACCCATATATCATCACT 59.335 38.462 0.00 0.00 0.00 3.41
1378 1442 1.676014 CCTTGGTGTCTTGATCGACCC 60.676 57.143 0.00 1.42 32.97 4.46
1386 1450 2.498167 CTTCTCCACCTTGGTGTCTTG 58.502 52.381 17.35 3.66 39.03 3.02
1461 1526 1.620323 TGCAGCAGAAGCAGAAGTAGA 59.380 47.619 0.00 0.00 45.49 2.59
1553 1627 5.515106 AGAGAGCCTGAAGACAATACTAGT 58.485 41.667 0.00 0.00 0.00 2.57
1600 1682 1.306568 GGAGCAGAGGAAGGGAGGT 60.307 63.158 0.00 0.00 0.00 3.85
1603 1685 1.306482 CAGGGAGCAGAGGAAGGGA 60.306 63.158 0.00 0.00 0.00 4.20
1722 1804 2.004589 AGGAAGAGGGGAGTGAGTACT 58.995 52.381 0.00 0.00 40.66 2.73
1824 1906 5.957168 ACTTTTCTCCTCTCATCTCATCTCA 59.043 40.000 0.00 0.00 0.00 3.27
1829 1911 6.425210 TCAAACTTTTCTCCTCTCATCTCA 57.575 37.500 0.00 0.00 0.00 3.27
1882 1964 2.663119 GCATTTCCGCAAGTGTCAAATC 59.337 45.455 0.00 0.00 0.00 2.17
2028 2110 1.630369 AGGCAACCTATCAGAACAGCA 59.370 47.619 0.00 0.00 28.47 4.41
2163 2252 4.638421 TCAGGCCGACAATATAAGGTTTTG 59.362 41.667 0.00 0.00 0.00 2.44
2231 2323 1.312371 TTGCCCAGGAAAGTATGCGC 61.312 55.000 0.00 0.00 0.00 6.09
2242 2334 0.404040 TGGTTCTAAGGTTGCCCAGG 59.596 55.000 0.00 0.00 0.00 4.45
2421 2513 9.678260 AACTACAAAGAGCATCATCTTTTCTAT 57.322 29.630 0.00 0.00 45.10 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.