Multiple sequence alignment - TraesCS5B01G281600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G281600 chr5B 100.000 3115 0 0 1 3115 466772639 466775753 0.000000e+00 5753.0
1 TraesCS5B01G281600 chr5B 100.000 2782 0 0 3510 6291 466776148 466778929 0.000000e+00 5138.0
2 TraesCS5B01G281600 chr5B 93.590 156 7 3 415 569 490757407 490757560 4.910000e-56 230.0
3 TraesCS5B01G281600 chr5B 90.226 133 11 2 1122 1254 65194334 65194204 8.380000e-39 172.0
4 TraesCS5B01G281600 chr5B 90.244 123 12 0 4106 4228 65191471 65191349 1.810000e-35 161.0
5 TraesCS5B01G281600 chr5B 91.429 105 8 1 2045 2148 711237976 711237872 6.570000e-30 143.0
6 TraesCS5B01G281600 chr5B 91.176 102 7 2 2048 2148 22532639 22532739 3.060000e-28 137.0
7 TraesCS5B01G281600 chr5B 90.909 99 9 0 2046 2144 697972389 697972291 3.960000e-27 134.0
8 TraesCS5B01G281600 chr5B 87.755 49 6 0 1001 1049 65194449 65194401 2.450000e-04 58.4
9 TraesCS5B01G281600 chr5D 91.844 1508 100 18 1474 2972 388097424 388098917 0.000000e+00 2082.0
10 TraesCS5B01G281600 chr5D 95.884 899 28 6 3642 4535 388098883 388099777 0.000000e+00 1447.0
11 TraesCS5B01G281600 chr5D 91.977 1022 33 14 4614 5625 388100017 388100999 0.000000e+00 1387.0
12 TraesCS5B01G281600 chr5D 97.508 642 16 0 5650 6291 388100998 388101639 0.000000e+00 1098.0
13 TraesCS5B01G281600 chr5D 95.137 473 18 4 826 1295 388096953 388097423 0.000000e+00 741.0
14 TraesCS5B01G281600 chr5D 89.000 200 21 1 1300 1499 445106661 445106463 4.870000e-61 246.0
15 TraesCS5B01G281600 chr5D 76.448 518 75 28 3744 4228 65901642 65902145 2.930000e-58 237.0
16 TraesCS5B01G281600 chr5D 90.476 105 10 0 3528 3632 388098912 388099016 8.500000e-29 139.0
17 TraesCS5B01G281600 chr5D 94.444 72 4 0 2524 2595 65901160 65901231 1.850000e-20 111.0
18 TraesCS5B01G281600 chr5D 89.583 48 5 0 998 1045 65883756 65883803 1.890000e-05 62.1
19 TraesCS5B01G281600 chr5D 100.000 33 0 0 4587 4619 388099926 388099958 1.890000e-05 62.1
20 TraesCS5B01G281600 chr5A 96.161 1016 27 7 3528 4535 491289240 491290251 0.000000e+00 1650.0
21 TraesCS5B01G281600 chr5A 95.265 887 31 3 4614 5498 491290350 491291227 0.000000e+00 1395.0
22 TraesCS5B01G281600 chr5A 93.240 784 40 10 2194 2974 491288474 491289247 0.000000e+00 1142.0
23 TraesCS5B01G281600 chr5A 95.437 526 23 1 5766 6291 491292937 491293461 0.000000e+00 837.0
24 TraesCS5B01G281600 chr5A 90.323 589 50 6 1471 2055 491287760 491288345 0.000000e+00 765.0
25 TraesCS5B01G281600 chr5A 87.463 678 43 16 615 1265 491287052 491287714 0.000000e+00 743.0
26 TraesCS5B01G281600 chr5A 90.566 318 12 9 5527 5840 491292664 491292967 7.590000e-109 405.0
27 TraesCS5B01G281600 chr5A 85.714 343 33 11 82 421 491286635 491286964 1.300000e-91 348.0
28 TraesCS5B01G281600 chr5A 78.237 363 55 15 3882 4221 55159755 55160116 1.780000e-50 211.0
29 TraesCS5B01G281600 chr5A 92.381 105 8 0 3528 3632 491289383 491289487 3.930000e-32 150.0
30 TraesCS5B01G281600 chr5A 91.089 101 7 2 2054 2152 207681914 207681814 1.100000e-27 135.0
31 TraesCS5B01G281600 chr5A 87.156 109 12 2 1141 1249 55157641 55157747 8.560000e-24 122.0
32 TraesCS5B01G281600 chr5A 97.917 48 1 0 4572 4619 491290244 491290291 4.040000e-12 84.2
33 TraesCS5B01G281600 chr5A 100.000 35 0 0 2938 2972 491289354 491289388 1.460000e-06 65.8
34 TraesCS5B01G281600 chr6A 80.075 532 66 26 3887 4398 581887963 581888474 6.000000e-95 359.0
35 TraesCS5B01G281600 chr6A 78.934 394 67 11 4913 5293 581888971 581889361 2.910000e-63 254.0
36 TraesCS5B01G281600 chr6A 87.500 152 11 6 1122 1271 581885465 581885610 1.080000e-37 169.0
37 TraesCS5B01G281600 chr6B 82.682 358 42 14 3887 4227 657940925 657941279 3.690000e-77 300.0
38 TraesCS5B01G281600 chr6B 97.260 146 3 1 420 565 487031928 487031784 4.870000e-61 246.0
39 TraesCS5B01G281600 chr6B 88.079 151 12 4 1122 1271 657938451 657938596 2.330000e-39 174.0
40 TraesCS5B01G281600 chr6B 89.286 112 9 3 2045 2153 607208122 607208233 3.060000e-28 137.0
41 TraesCS5B01G281600 chr6D 77.714 525 82 27 3887 4385 434510538 434511053 7.980000e-74 289.0
42 TraesCS5B01G281600 chr6D 78.934 394 68 11 4913 5293 434511561 434511952 2.910000e-63 254.0
43 TraesCS5B01G281600 chr6D 91.477 176 14 1 1309 1484 431000180 431000006 2.270000e-59 241.0
44 TraesCS5B01G281600 chr6D 94.194 155 6 3 416 569 21052136 21051984 3.790000e-57 233.0
45 TraesCS5B01G281600 chr6D 88.079 151 12 4 1122 1271 434508062 434508207 2.330000e-39 174.0
46 TraesCS5B01G281600 chrUn 93.939 165 10 0 1309 1473 15866766 15866930 3.770000e-62 250.0
47 TraesCS5B01G281600 chr1D 93.023 172 11 1 1304 1475 128530469 128530639 3.770000e-62 250.0
48 TraesCS5B01G281600 chr1D 97.059 34 1 0 1187 1220 455518992 455519025 2.450000e-04 58.4
49 TraesCS5B01G281600 chr4D 92.941 170 12 0 1306 1475 243613269 243613438 1.350000e-61 248.0
50 TraesCS5B01G281600 chr4D 94.702 151 5 3 420 569 12520301 12520153 1.360000e-56 231.0
51 TraesCS5B01G281600 chr4D 94.702 151 5 3 420 569 23422598 23422450 1.360000e-56 231.0
52 TraesCS5B01G281600 chr4D 94.702 151 5 3 420 569 437295926 437295778 1.360000e-56 231.0
53 TraesCS5B01G281600 chr3A 92.982 171 11 1 1309 1479 529671132 529671301 1.350000e-61 248.0
54 TraesCS5B01G281600 chr2D 92.941 170 12 0 1309 1478 515460882 515460713 1.350000e-61 248.0
55 TraesCS5B01G281600 chr2D 93.478 92 6 0 2049 2140 13622450 13622541 3.060000e-28 137.0
56 TraesCS5B01G281600 chr3D 91.525 177 13 2 1306 1481 550509428 550509603 6.300000e-60 243.0
57 TraesCS5B01G281600 chr7D 91.477 176 13 2 1304 1478 477150991 477151165 2.270000e-59 241.0
58 TraesCS5B01G281600 chr4A 94.194 155 5 4 417 569 517406636 517406484 3.790000e-57 233.0
59 TraesCS5B01G281600 chr1A 94.702 151 5 3 420 569 566481169 566481021 1.360000e-56 231.0
60 TraesCS5B01G281600 chr4B 96.403 139 4 1 2974 3112 527121765 527121628 1.760000e-55 228.0
61 TraesCS5B01G281600 chr4B 97.297 74 1 1 2974 3047 624864115 624864043 2.380000e-24 124.0
62 TraesCS5B01G281600 chr2B 90.643 171 11 5 401 569 23107011 23106844 8.210000e-54 222.0
63 TraesCS5B01G281600 chr2B 89.928 139 12 2 2974 3111 70838834 70838971 1.800000e-40 178.0
64 TraesCS5B01G281600 chr7B 89.583 144 11 2 2976 3115 140135855 140135998 5.010000e-41 180.0
65 TraesCS5B01G281600 chr7B 93.684 95 6 0 2052 2146 598012028 598012122 6.570000e-30 143.0
66 TraesCS5B01G281600 chr1B 95.506 89 3 1 2054 2142 568524120 568524207 2.360000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G281600 chr5B 466772639 466778929 6290 False 5445.500000 5753 100.000000 1 6291 2 chr5B.!!$F3 6290
1 TraesCS5B01G281600 chr5D 388096953 388101639 4686 False 993.728571 2082 94.689429 826 6291 7 chr5D.!!$F3 5465
2 TraesCS5B01G281600 chr5A 491286635 491293461 6826 False 689.545455 1650 93.133364 82 6291 11 chr5A.!!$F2 6209
3 TraesCS5B01G281600 chr6A 581885465 581889361 3896 False 260.666667 359 82.169667 1122 5293 3 chr6A.!!$F1 4171
4 TraesCS5B01G281600 chr6B 657938451 657941279 2828 False 237.000000 300 85.380500 1122 4227 2 chr6B.!!$F2 3105
5 TraesCS5B01G281600 chr6D 434508062 434511952 3890 False 239.000000 289 81.575667 1122 5293 3 chr6D.!!$F1 4171

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
863 933 0.026285 CCTCGCGAGCCGTAATTTTG 59.974 55.000 30.49 8.92 38.35 2.44 F
934 1009 0.033405 CCGTACTCCCCTCTTCTCCA 60.033 60.000 0.00 0.00 0.00 3.86 F
1740 2111 0.173029 CATTTGCAGCGGCCATAACA 59.827 50.000 6.32 0.00 40.13 2.41 F
1742 2113 0.173029 TTTGCAGCGGCCATAACATG 59.827 50.000 6.32 0.00 40.13 3.21 F
2980 4021 0.520404 CAGAACTCATGTGCAGTGGC 59.480 55.000 0.00 0.00 41.68 5.01 F
3001 4042 0.670546 GAGCTACGTTGAAGGCTGCA 60.671 55.000 0.50 0.00 35.01 4.41 F
3002 4043 0.671781 AGCTACGTTGAAGGCTGCAG 60.672 55.000 10.11 10.11 33.50 4.41 F
3004 4045 1.003839 TACGTTGAAGGCTGCAGGG 60.004 57.895 17.12 0.00 0.00 4.45 F
3104 4145 1.255882 TGGCTTGCTAAACACCCATG 58.744 50.000 0.00 0.00 0.00 3.66 F
3105 4146 1.256812 GGCTTGCTAAACACCCATGT 58.743 50.000 0.00 0.00 42.46 3.21 F
3529 4570 2.105930 CTAGCTCCGCCACTGCTC 59.894 66.667 0.00 0.00 38.15 4.26 F
5111 6450 2.414058 TTGTAAGCGCATGTTTGTGG 57.586 45.000 11.47 0.00 33.82 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1865 2499 0.313043 CAAAAGTGCAGGTCAGGCAG 59.687 55.000 0.00 0.00 42.85 4.85 R
2413 3371 1.106944 AAGAACAGCCCCAACAACCG 61.107 55.000 0.00 0.00 0.00 4.44 R
2982 4023 0.670546 TGCAGCCTTCAACGTAGCTC 60.671 55.000 0.00 0.00 31.93 4.09 R
2983 4024 0.671781 CTGCAGCCTTCAACGTAGCT 60.672 55.000 0.00 0.00 35.52 3.32 R
4087 5167 1.209504 CCTGCTATCGAGGGGAACAAA 59.790 52.381 0.00 0.00 0.00 2.83 R
4763 6081 2.016905 AACTCAGCTGAGGTACTGGT 57.983 50.000 39.42 20.43 46.13 4.00 R
4765 6083 3.007398 AGGAAAACTCAGCTGAGGTACTG 59.993 47.826 39.42 20.48 42.17 2.74 R
4766 6084 3.243724 AGGAAAACTCAGCTGAGGTACT 58.756 45.455 39.42 29.86 42.17 2.73 R
4767 6085 3.686916 AGGAAAACTCAGCTGAGGTAC 57.313 47.619 39.42 30.45 42.17 3.34 R
4768 6086 3.904339 AGAAGGAAAACTCAGCTGAGGTA 59.096 43.478 39.42 10.60 42.17 3.08 R
5242 6592 0.457853 TCGGGCTGATCTTTTCGTCG 60.458 55.000 0.00 0.00 0.00 5.12 R
6182 9007 1.376424 CGGCCACATCTTCTGCACT 60.376 57.895 2.24 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 9.974980 AGTTTGACTTTTACTTTTTGTCTTTGA 57.025 25.926 0.00 0.00 0.00 2.69
250 251 8.627208 AACATTCATGACTCTCTAAAACATGT 57.373 30.769 0.00 0.00 39.18 3.21
251 252 8.627208 ACATTCATGACTCTCTAAAACATGTT 57.373 30.769 4.92 4.92 39.18 2.71
370 371 9.757227 AAAAAGATTCACGTATTTCCAAATGAA 57.243 25.926 0.00 0.00 0.00 2.57
371 372 9.757227 AAAAGATTCACGTATTTCCAAATGAAA 57.243 25.926 0.00 0.00 46.54 2.69
432 434 9.832445 TTAAATATTCATGTACTCCCTCTGTTC 57.168 33.333 0.00 0.00 0.00 3.18
433 435 4.762289 ATTCATGTACTCCCTCTGTTCC 57.238 45.455 0.00 0.00 0.00 3.62
434 436 3.474798 TCATGTACTCCCTCTGTTCCT 57.525 47.619 0.00 0.00 0.00 3.36
435 437 4.603094 TCATGTACTCCCTCTGTTCCTA 57.397 45.455 0.00 0.00 0.00 2.94
436 438 4.942944 TCATGTACTCCCTCTGTTCCTAA 58.057 43.478 0.00 0.00 0.00 2.69
437 439 5.338632 TCATGTACTCCCTCTGTTCCTAAA 58.661 41.667 0.00 0.00 0.00 1.85
438 440 5.964477 TCATGTACTCCCTCTGTTCCTAAAT 59.036 40.000 0.00 0.00 0.00 1.40
439 441 7.130099 TCATGTACTCCCTCTGTTCCTAAATA 58.870 38.462 0.00 0.00 0.00 1.40
440 442 7.789831 TCATGTACTCCCTCTGTTCCTAAATAT 59.210 37.037 0.00 0.00 0.00 1.28
441 443 9.090103 CATGTACTCCCTCTGTTCCTAAATATA 57.910 37.037 0.00 0.00 0.00 0.86
442 444 9.670442 ATGTACTCCCTCTGTTCCTAAATATAA 57.330 33.333 0.00 0.00 0.00 0.98
443 445 9.144298 TGTACTCCCTCTGTTCCTAAATATAAG 57.856 37.037 0.00 0.00 0.00 1.73
444 446 9.145442 GTACTCCCTCTGTTCCTAAATATAAGT 57.855 37.037 0.00 0.00 0.00 2.24
445 447 8.252624 ACTCCCTCTGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
446 448 8.068733 ACTCCCTCTGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
447 449 8.855804 TCCCTCTGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
448 450 9.280456 TCCCTCTGTTCCTAAATATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
449 451 9.907229 CCCTCTGTTCCTAAATATAAGTCTTTT 57.093 33.333 0.00 0.00 0.00 2.27
467 469 9.847224 AAGTCTTTTAGAGATTCCACTACAAAA 57.153 29.630 0.00 0.00 36.61 2.44
468 470 9.274206 AGTCTTTTAGAGATTCCACTACAAAAC 57.726 33.333 0.00 0.00 36.61 2.43
469 471 9.274206 GTCTTTTAGAGATTCCACTACAAAACT 57.726 33.333 0.00 0.00 36.61 2.66
476 478 7.974501 AGAGATTCCACTACAAAACTACATACG 59.025 37.037 0.00 0.00 0.00 3.06
477 479 7.833786 AGATTCCACTACAAAACTACATACGA 58.166 34.615 0.00 0.00 0.00 3.43
478 480 8.308931 AGATTCCACTACAAAACTACATACGAA 58.691 33.333 0.00 0.00 0.00 3.85
479 481 9.095065 GATTCCACTACAAAACTACATACGAAT 57.905 33.333 0.00 0.00 0.00 3.34
480 482 7.821595 TCCACTACAAAACTACATACGAATG 57.178 36.000 0.00 0.00 39.17 2.67
482 484 8.522003 TCCACTACAAAACTACATACGAATGTA 58.478 33.333 0.00 0.00 44.66 2.29
483 485 9.309516 CCACTACAAAACTACATACGAATGTAT 57.690 33.333 0.00 0.00 45.33 2.29
521 523 7.992754 AGAGTTTAGATTCACTCATTTTGCT 57.007 32.000 2.36 0.00 41.77 3.91
522 524 8.401490 AGAGTTTAGATTCACTCATTTTGCTT 57.599 30.769 2.36 0.00 41.77 3.91
523 525 8.510505 AGAGTTTAGATTCACTCATTTTGCTTC 58.489 33.333 2.36 0.00 41.77 3.86
524 526 7.301054 AGTTTAGATTCACTCATTTTGCTTCG 58.699 34.615 0.00 0.00 0.00 3.79
525 527 6.801539 TTAGATTCACTCATTTTGCTTCGT 57.198 33.333 0.00 0.00 0.00 3.85
526 528 7.899178 TTAGATTCACTCATTTTGCTTCGTA 57.101 32.000 0.00 0.00 0.00 3.43
527 529 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
528 530 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
529 531 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
530 532 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
531 533 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
532 534 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
533 535 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
534 536 5.581085 ACTCATTTTGCTTCGTATGTAGTCC 59.419 40.000 0.00 0.00 0.00 3.85
535 537 5.483811 TCATTTTGCTTCGTATGTAGTCCA 58.516 37.500 0.00 0.00 0.00 4.02
536 538 6.112734 TCATTTTGCTTCGTATGTAGTCCAT 58.887 36.000 0.00 0.00 37.58 3.41
537 539 7.269316 TCATTTTGCTTCGTATGTAGTCCATA 58.731 34.615 0.00 0.00 34.86 2.74
538 540 7.438160 TCATTTTGCTTCGTATGTAGTCCATAG 59.562 37.037 0.00 0.00 36.71 2.23
539 541 5.847111 TTGCTTCGTATGTAGTCCATAGT 57.153 39.130 0.00 0.00 36.71 2.12
540 542 5.183014 TGCTTCGTATGTAGTCCATAGTG 57.817 43.478 0.00 0.00 36.71 2.74
541 543 4.037565 TGCTTCGTATGTAGTCCATAGTGG 59.962 45.833 0.00 0.00 36.71 4.00
542 544 4.277672 GCTTCGTATGTAGTCCATAGTGGA 59.722 45.833 0.00 0.00 45.98 4.02
557 559 8.380742 TCCATAGTGGAATCTCTAAAAAGACT 57.619 34.615 0.00 0.00 45.00 3.24
558 560 8.826765 TCCATAGTGGAATCTCTAAAAAGACTT 58.173 33.333 0.00 0.00 45.00 3.01
584 586 8.762481 ATATTTTAGGGAGTAATTGGGAACAC 57.238 34.615 0.00 0.00 42.67 3.32
587 589 6.894735 TTAGGGAGTAATTGGGAACACATA 57.105 37.500 0.00 0.00 42.67 2.29
589 591 6.341408 AGGGAGTAATTGGGAACACATATT 57.659 37.500 0.00 0.00 42.67 1.28
602 604 7.448161 TGGGAACACATATTCATGCCTAATAAG 59.552 37.037 0.00 0.00 35.39 1.73
603 605 7.094205 GGGAACACATATTCATGCCTAATAAGG 60.094 40.741 0.00 0.00 46.76 2.69
604 606 7.094205 GGAACACATATTCATGCCTAATAAGGG 60.094 40.741 0.00 0.00 43.87 3.95
623 672 2.860735 GGGATGTTCTCTCGTCAATTCG 59.139 50.000 0.00 0.00 0.00 3.34
638 687 4.075682 TCAATTCGACCAAACCATTAGCA 58.924 39.130 0.00 0.00 0.00 3.49
675 724 4.768145 CGAAAAACTCGTAGCATTGACAA 58.232 39.130 0.00 0.00 42.89 3.18
680 729 7.435068 AAAACTCGTAGCATTGACAAGTTAT 57.565 32.000 0.00 0.00 0.00 1.89
682 731 5.109903 ACTCGTAGCATTGACAAGTTATCC 58.890 41.667 0.00 0.00 0.00 2.59
804 854 1.555967 TTGCCATAAAACTGGAGCCC 58.444 50.000 0.00 0.00 38.69 5.19
819 869 4.157120 CCCAGGCCGGTCCGTAAG 62.157 72.222 11.06 0.00 40.77 2.34
820 870 3.387947 CCAGGCCGGTCCGTAAGT 61.388 66.667 11.06 0.00 40.77 2.24
822 872 1.397390 CCAGGCCGGTCCGTAAGTAT 61.397 60.000 11.06 0.00 40.77 2.12
824 874 1.068585 GGCCGGTCCGTAAGTATGG 59.931 63.158 11.06 0.00 0.00 2.74
827 877 1.068585 CGGTCCGTAAGTATGGCCC 59.931 63.158 2.08 0.00 32.29 5.80
828 878 1.678598 CGGTCCGTAAGTATGGCCCA 61.679 60.000 2.08 0.00 29.75 5.36
829 879 0.179065 GGTCCGTAAGTATGGCCCAC 60.179 60.000 0.00 0.00 30.79 4.61
862 932 0.390735 ACCTCGCGAGCCGTAATTTT 60.391 50.000 30.49 2.42 38.35 1.82
863 933 0.026285 CCTCGCGAGCCGTAATTTTG 59.974 55.000 30.49 8.92 38.35 2.44
866 936 1.800681 GCGAGCCGTAATTTTGCCT 59.199 52.632 0.00 0.00 0.00 4.75
872 945 4.322539 CGAGCCGTAATTTTGCCTAAAAAC 59.677 41.667 0.00 0.00 40.51 2.43
873 946 4.562082 AGCCGTAATTTTGCCTAAAAACC 58.438 39.130 0.00 0.00 40.51 3.27
874 947 3.680937 GCCGTAATTTTGCCTAAAAACCC 59.319 43.478 0.00 0.00 40.51 4.11
934 1009 0.033405 CCGTACTCCCCTCTTCTCCA 60.033 60.000 0.00 0.00 0.00 3.86
1042 1117 0.520827 GTCGCACTCGTAAGTCTCCG 60.521 60.000 0.00 0.00 36.96 4.63
1312 1523 6.064717 AGTATTCCCCTGATGCAAATTACTC 58.935 40.000 0.00 0.00 0.00 2.59
1313 1524 3.297134 TCCCCTGATGCAAATTACTCC 57.703 47.619 0.00 0.00 0.00 3.85
1314 1525 2.091885 TCCCCTGATGCAAATTACTCCC 60.092 50.000 0.00 0.00 0.00 4.30
1316 1527 3.217626 CCCTGATGCAAATTACTCCCTC 58.782 50.000 0.00 0.00 0.00 4.30
1317 1528 3.217626 CCTGATGCAAATTACTCCCTCC 58.782 50.000 0.00 0.00 0.00 4.30
1319 1530 2.238646 TGATGCAAATTACTCCCTCCGT 59.761 45.455 0.00 0.00 0.00 4.69
1320 1531 2.871096 TGCAAATTACTCCCTCCGTT 57.129 45.000 0.00 0.00 0.00 4.44
1321 1532 2.706890 TGCAAATTACTCCCTCCGTTC 58.293 47.619 0.00 0.00 0.00 3.95
1322 1533 2.014857 GCAAATTACTCCCTCCGTTCC 58.985 52.381 0.00 0.00 0.00 3.62
1323 1534 2.355818 GCAAATTACTCCCTCCGTTCCT 60.356 50.000 0.00 0.00 0.00 3.36
1325 1536 4.624604 GCAAATTACTCCCTCCGTTCCTAA 60.625 45.833 0.00 0.00 0.00 2.69
1326 1537 5.493809 CAAATTACTCCCTCCGTTCCTAAA 58.506 41.667 0.00 0.00 0.00 1.85
1327 1538 5.970501 AATTACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
1328 1539 7.277396 CAAATTACTCCCTCCGTTCCTAAATA 58.723 38.462 0.00 0.00 0.00 1.40
1329 1540 7.628501 AATTACTCCCTCCGTTCCTAAATAT 57.371 36.000 0.00 0.00 0.00 1.28
1331 1542 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
1332 1543 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1333 1544 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1334 1545 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1336 1547 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1337 1548 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1339 1550 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1357 1568 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
1374 1669 9.653287 CAAATGGACTATAACATACGGATGTAT 57.347 33.333 15.10 10.34 45.93 2.29
1376 1671 8.824756 ATGGACTATAACATACGGATGTATCT 57.175 34.615 15.10 0.44 45.93 1.98
1386 1681 9.778741 AACATACGGATGTATCTTGACATATTT 57.221 29.630 15.10 0.00 45.93 1.40
1387 1682 9.778741 ACATACGGATGTATCTTGACATATTTT 57.221 29.630 12.79 0.00 44.77 1.82
1389 1684 7.496529 ACGGATGTATCTTGACATATTTTGG 57.503 36.000 0.00 0.00 40.18 3.28
1390 1685 7.279615 ACGGATGTATCTTGACATATTTTGGA 58.720 34.615 0.00 0.00 40.18 3.53
1393 1688 8.562892 GGATGTATCTTGACATATTTTGGAGTG 58.437 37.037 0.00 0.00 40.18 3.51
1394 1689 9.113838 GATGTATCTTGACATATTTTGGAGTGT 57.886 33.333 0.00 0.00 40.18 3.55
1411 1706 9.585099 TTTGGAGTGTATATTCATTCATTTTGC 57.415 29.630 7.07 0.00 0.00 3.68
1412 1707 8.523915 TGGAGTGTATATTCATTCATTTTGCT 57.476 30.769 7.07 0.00 0.00 3.91
1413 1708 8.623903 TGGAGTGTATATTCATTCATTTTGCTC 58.376 33.333 7.07 0.00 0.00 4.26
1414 1709 8.078596 GGAGTGTATATTCATTCATTTTGCTCC 58.921 37.037 7.07 0.00 0.00 4.70
1415 1710 7.642669 AGTGTATATTCATTCATTTTGCTCCG 58.357 34.615 0.00 0.00 0.00 4.63
1416 1711 7.283127 AGTGTATATTCATTCATTTTGCTCCGT 59.717 33.333 0.00 0.00 0.00 4.69
1417 1712 8.556194 GTGTATATTCATTCATTTTGCTCCGTA 58.444 33.333 0.00 0.00 0.00 4.02
1418 1713 9.283768 TGTATATTCATTCATTTTGCTCCGTAT 57.716 29.630 0.00 0.00 0.00 3.06
1419 1714 9.546909 GTATATTCATTCATTTTGCTCCGTATG 57.453 33.333 0.00 0.00 0.00 2.39
1420 1715 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
1421 1716 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
1422 1717 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
1423 1718 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
1424 1719 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
1425 1720 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
1426 1721 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
1427 1722 3.945981 TTTGCTCCGTATGTAGTCACA 57.054 42.857 0.00 0.00 39.52 3.58
1429 1724 3.436700 TGCTCCGTATGTAGTCACATG 57.563 47.619 0.58 0.00 45.17 3.21
1430 1725 2.758423 TGCTCCGTATGTAGTCACATGT 59.242 45.455 0.00 0.00 45.17 3.21
1431 1726 3.194755 TGCTCCGTATGTAGTCACATGTT 59.805 43.478 0.00 0.00 45.17 2.71
1432 1727 3.551890 GCTCCGTATGTAGTCACATGTTG 59.448 47.826 0.00 0.00 45.17 3.33
1433 1728 4.112634 CTCCGTATGTAGTCACATGTTGG 58.887 47.826 0.00 0.74 45.17 3.77
1434 1729 3.764972 TCCGTATGTAGTCACATGTTGGA 59.235 43.478 0.00 2.83 45.17 3.53
1435 1730 4.221041 TCCGTATGTAGTCACATGTTGGAA 59.779 41.667 0.00 0.00 45.17 3.53
1436 1731 5.105106 TCCGTATGTAGTCACATGTTGGAAT 60.105 40.000 0.00 0.00 45.17 3.01
1437 1732 5.234329 CCGTATGTAGTCACATGTTGGAATC 59.766 44.000 0.00 0.00 45.17 2.52
1438 1733 6.042777 CGTATGTAGTCACATGTTGGAATCT 58.957 40.000 0.00 0.00 45.17 2.40
1439 1734 6.199154 CGTATGTAGTCACATGTTGGAATCTC 59.801 42.308 0.00 0.00 45.17 2.75
1440 1735 5.745312 TGTAGTCACATGTTGGAATCTCT 57.255 39.130 0.00 0.00 0.00 3.10
1441 1736 6.850752 TGTAGTCACATGTTGGAATCTCTA 57.149 37.500 0.00 0.00 0.00 2.43
1442 1737 7.239763 TGTAGTCACATGTTGGAATCTCTAA 57.760 36.000 0.00 0.00 0.00 2.10
1443 1738 7.676004 TGTAGTCACATGTTGGAATCTCTAAA 58.324 34.615 0.00 0.00 0.00 1.85
1444 1739 8.154203 TGTAGTCACATGTTGGAATCTCTAAAA 58.846 33.333 0.00 0.00 0.00 1.52
1445 1740 8.999431 GTAGTCACATGTTGGAATCTCTAAAAA 58.001 33.333 0.00 0.00 0.00 1.94
1446 1741 8.641498 AGTCACATGTTGGAATCTCTAAAAAT 57.359 30.769 0.00 0.00 0.00 1.82
1447 1742 9.739276 AGTCACATGTTGGAATCTCTAAAAATA 57.261 29.630 0.00 0.00 0.00 1.40
1448 1743 9.774742 GTCACATGTTGGAATCTCTAAAAATAC 57.225 33.333 0.00 0.00 0.00 1.89
1449 1744 9.739276 TCACATGTTGGAATCTCTAAAAATACT 57.261 29.630 0.00 0.00 0.00 2.12
1469 1764 9.643778 AAATACTTATATTTAGGGATGGAGGGA 57.356 33.333 0.00 0.00 38.89 4.20
1470 1765 8.862091 ATACTTATATTTAGGGATGGAGGGAG 57.138 38.462 0.00 0.00 0.00 4.30
1471 1766 6.644882 ACTTATATTTAGGGATGGAGGGAGT 58.355 40.000 0.00 0.00 0.00 3.85
1472 1767 7.786968 ACTTATATTTAGGGATGGAGGGAGTA 58.213 38.462 0.00 0.00 0.00 2.59
1497 1792 7.865707 AGTTTAGTTTCTCAGCAGTGTAAATG 58.134 34.615 0.00 0.00 33.24 2.32
1502 1797 6.488006 AGTTTCTCAGCAGTGTAAATGTTCAT 59.512 34.615 0.00 0.00 32.28 2.57
1539 1834 2.169978 GAGCAATTCCCTACCGTACCTT 59.830 50.000 0.00 0.00 0.00 3.50
1550 1845 2.968675 ACCGTACCTTTCGAATCAAGG 58.031 47.619 11.97 11.97 45.74 3.61
1581 1876 4.974888 GGATCGTACGATGTTCCTTCTAAC 59.025 45.833 33.86 14.84 34.60 2.34
1597 1892 6.428159 TCCTTCTAACTTGCTGATTCAGAAAC 59.572 38.462 17.87 0.50 32.44 2.78
1605 1900 7.043565 ACTTGCTGATTCAGAAACACAAATTT 58.956 30.769 17.87 0.00 32.44 1.82
1629 1924 8.918202 TTGTGATCTCCTTGTTTTATAACAGT 57.082 30.769 0.00 0.00 44.56 3.55
1630 1925 8.918202 TGTGATCTCCTTGTTTTATAACAGTT 57.082 30.769 0.00 0.00 44.56 3.16
1680 1978 5.116983 CGTTTGTGTTCATTAATTGGCAGTC 59.883 40.000 0.00 0.00 0.00 3.51
1686 1984 5.948758 TGTTCATTAATTGGCAGTCCATACA 59.051 36.000 0.00 0.00 43.05 2.29
1692 1990 3.719268 TTGGCAGTCCATACAATCAGT 57.281 42.857 0.00 0.00 43.05 3.41
1693 1991 3.266510 TGGCAGTCCATACAATCAGTC 57.733 47.619 0.00 0.00 37.47 3.51
1694 1992 2.205074 GGCAGTCCATACAATCAGTCG 58.795 52.381 0.00 0.00 0.00 4.18
1736 2107 1.952102 CTTCCATTTGCAGCGGCCAT 61.952 55.000 6.32 0.00 40.13 4.40
1739 2110 0.528249 CCATTTGCAGCGGCCATAAC 60.528 55.000 6.32 0.00 40.13 1.89
1740 2111 0.173029 CATTTGCAGCGGCCATAACA 59.827 50.000 6.32 0.00 40.13 2.41
1742 2113 0.173029 TTTGCAGCGGCCATAACATG 59.827 50.000 6.32 0.00 40.13 3.21
1749 2120 1.064060 GCGGCCATAACATGTCACTTC 59.936 52.381 2.24 0.00 0.00 3.01
1754 2125 3.064545 GCCATAACATGTCACTTCAGAGC 59.935 47.826 0.00 0.00 0.00 4.09
1787 2417 5.636837 TGCAATATTTTGTTCTTACGGAGC 58.363 37.500 0.00 0.00 35.17 4.70
1794 2424 2.566913 TGTTCTTACGGAGCAAAGCAA 58.433 42.857 0.00 0.00 32.34 3.91
1851 2481 5.163550 GCAGGTGAAAGTTAGACAAAGGTTT 60.164 40.000 0.00 0.00 0.00 3.27
1904 2622 7.860872 ACTTTTGTTTTCGATTCTGTAATGTCC 59.139 33.333 0.00 0.00 0.00 4.02
1933 2651 6.635030 AGACTCTAATGAACCAACAAAACC 57.365 37.500 0.00 0.00 0.00 3.27
1978 2696 3.766545 TGGACTTAGCATGCTTTCCTTT 58.233 40.909 28.02 1.31 0.00 3.11
1996 2714 3.439129 CCTTTTACGCTTAACCAAGGGAG 59.561 47.826 8.25 0.00 45.20 4.30
1997 2715 4.320870 CTTTTACGCTTAACCAAGGGAGA 58.679 43.478 8.25 0.00 45.20 3.71
1998 2716 4.354893 TTTACGCTTAACCAAGGGAGAA 57.645 40.909 8.25 0.55 45.20 2.87
1999 2717 2.180432 ACGCTTAACCAAGGGAGAAC 57.820 50.000 8.25 0.00 45.20 3.01
2000 2718 1.697982 ACGCTTAACCAAGGGAGAACT 59.302 47.619 8.25 0.00 45.20 3.01
2002 2720 2.935676 CGCTTAACCAAGGGAGAACTCC 60.936 54.545 11.97 11.97 45.20 3.85
2065 2841 4.568956 GTCTATCTACTACTCCCTCCGTC 58.431 52.174 0.00 0.00 0.00 4.79
2066 2842 4.284234 GTCTATCTACTACTCCCTCCGTCT 59.716 50.000 0.00 0.00 0.00 4.18
2067 2843 3.775261 ATCTACTACTCCCTCCGTCTC 57.225 52.381 0.00 0.00 0.00 3.36
2068 2844 2.475155 TCTACTACTCCCTCCGTCTCA 58.525 52.381 0.00 0.00 0.00 3.27
2078 2854 4.543689 TCCCTCCGTCTCATAATGTAAGT 58.456 43.478 0.00 0.00 0.00 2.24
2079 2855 4.583489 TCCCTCCGTCTCATAATGTAAGTC 59.417 45.833 0.00 0.00 0.00 3.01
2080 2856 4.537965 CCTCCGTCTCATAATGTAAGTCG 58.462 47.826 0.00 0.00 0.00 4.18
2081 2857 4.036498 CCTCCGTCTCATAATGTAAGTCGT 59.964 45.833 0.00 0.00 0.00 4.34
2085 2861 6.869913 TCCGTCTCATAATGTAAGTCGTTTTT 59.130 34.615 0.00 0.00 0.00 1.94
2370 3328 5.590259 ACATAAATAATTCGCTGGCTCAGTT 59.410 36.000 4.45 0.00 33.43 3.16
2415 3373 7.354025 TGTGTACTGTTTATTAATCACACGG 57.646 36.000 0.00 0.00 38.24 4.94
2444 3402 7.446106 TGGGGCTGTTCTTATAAGATTAGAA 57.554 36.000 21.59 5.50 34.49 2.10
2463 3421 5.391312 AGAATTGCCATTTGTCCACTAAC 57.609 39.130 0.00 0.00 0.00 2.34
2509 3484 6.737254 TTTTTCTGGGATTAACTCGTGATC 57.263 37.500 0.00 0.00 0.00 2.92
2615 3590 3.458118 TCACCTAACAAGGATACATGGGG 59.542 47.826 0.00 0.00 40.32 4.96
2653 3631 7.912056 TCTATTCATCACAAAGAAAGAGTGG 57.088 36.000 0.00 0.00 34.17 4.00
2675 3653 1.969923 CCACCCCTCTGATCTCTGATC 59.030 57.143 0.00 0.98 0.00 2.92
2793 3800 3.594603 AGATGGTCAACTTACTGGACG 57.405 47.619 0.00 0.00 32.39 4.79
2794 3801 2.897969 AGATGGTCAACTTACTGGACGT 59.102 45.455 0.00 0.00 32.39 4.34
2795 3802 4.084287 AGATGGTCAACTTACTGGACGTA 58.916 43.478 0.00 0.00 32.39 3.57
2797 3804 4.182693 TGGTCAACTTACTGGACGTATG 57.817 45.455 0.00 0.00 32.39 2.39
2798 3805 3.827876 TGGTCAACTTACTGGACGTATGA 59.172 43.478 0.00 0.00 32.39 2.15
2863 3903 9.709495 CTTTATTTGTTCTGATGGGAAATTCAA 57.291 29.630 0.00 0.00 0.00 2.69
2870 3910 4.096833 TCTGATGGGAAATTCAATGCTTCG 59.903 41.667 0.00 0.00 0.00 3.79
2893 3933 5.501156 GGTCAGAACCCTGTAAGATTTCAT 58.499 41.667 0.00 0.00 39.93 2.57
2902 3942 3.282021 TGTAAGATTTCATGCTGCTCCC 58.718 45.455 0.00 0.00 0.00 4.30
2926 3966 2.674852 CACCCAATCAGAACTCGTGATG 59.325 50.000 0.00 0.00 34.78 3.07
2929 3969 3.372206 CCCAATCAGAACTCGTGATGTTC 59.628 47.826 0.00 0.00 42.77 3.18
2971 4012 5.624344 ACTTGCTTCAATCAGAACTCATG 57.376 39.130 0.00 0.00 31.61 3.07
2974 4015 3.189910 TGCTTCAATCAGAACTCATGTGC 59.810 43.478 0.00 0.00 31.61 4.57
2975 4016 3.189910 GCTTCAATCAGAACTCATGTGCA 59.810 43.478 0.00 0.00 31.61 4.57
2977 4018 4.011966 TCAATCAGAACTCATGTGCAGT 57.988 40.909 0.00 0.00 0.00 4.40
2978 4019 3.749609 TCAATCAGAACTCATGTGCAGTG 59.250 43.478 0.00 0.00 0.00 3.66
2979 4020 2.174363 TCAGAACTCATGTGCAGTGG 57.826 50.000 0.00 0.00 0.00 4.00
2980 4021 0.520404 CAGAACTCATGTGCAGTGGC 59.480 55.000 0.00 0.00 41.68 5.01
2981 4022 0.952497 AGAACTCATGTGCAGTGGCG 60.952 55.000 0.00 0.00 45.35 5.69
2982 4023 1.915614 GAACTCATGTGCAGTGGCGG 61.916 60.000 0.00 0.00 45.35 6.13
2983 4024 2.046988 CTCATGTGCAGTGGCGGA 60.047 61.111 0.00 0.00 45.35 5.54
2984 4025 2.046988 TCATGTGCAGTGGCGGAG 60.047 61.111 0.00 0.00 45.35 4.63
2997 4038 3.782042 CGGAGCTACGTTGAAGGC 58.218 61.111 11.15 0.00 0.00 4.35
2998 4039 1.215647 CGGAGCTACGTTGAAGGCT 59.784 57.895 11.15 0.37 37.77 4.58
2999 4040 1.078759 CGGAGCTACGTTGAAGGCTG 61.079 60.000 11.15 0.00 35.01 4.85
3000 4041 1.362406 GGAGCTACGTTGAAGGCTGC 61.362 60.000 0.00 2.43 36.17 5.25
3001 4042 0.670546 GAGCTACGTTGAAGGCTGCA 60.671 55.000 0.50 0.00 35.01 4.41
3002 4043 0.671781 AGCTACGTTGAAGGCTGCAG 60.672 55.000 10.11 10.11 33.50 4.41
3003 4044 1.639298 GCTACGTTGAAGGCTGCAGG 61.639 60.000 17.12 0.00 0.00 4.85
3004 4045 1.003839 TACGTTGAAGGCTGCAGGG 60.004 57.895 17.12 0.00 0.00 4.45
3005 4046 2.463589 TACGTTGAAGGCTGCAGGGG 62.464 60.000 17.12 0.00 0.00 4.79
3006 4047 3.376918 GTTGAAGGCTGCAGGGGC 61.377 66.667 17.12 3.19 41.68 5.80
3038 4079 4.399004 CCAACCTTGGTCAAATTTGTGA 57.601 40.909 17.47 0.00 43.43 3.58
3039 4080 4.764172 CCAACCTTGGTCAAATTTGTGAA 58.236 39.130 17.47 8.21 43.43 3.18
3040 4081 5.181748 CCAACCTTGGTCAAATTTGTGAAA 58.818 37.500 17.47 9.35 43.43 2.69
3041 4082 5.294060 CCAACCTTGGTCAAATTTGTGAAAG 59.706 40.000 17.47 16.58 43.43 2.62
3042 4083 5.930837 ACCTTGGTCAAATTTGTGAAAGA 57.069 34.783 17.47 0.00 0.00 2.52
3043 4084 6.293004 ACCTTGGTCAAATTTGTGAAAGAA 57.707 33.333 17.47 3.63 0.00 2.52
3044 4085 6.888105 ACCTTGGTCAAATTTGTGAAAGAAT 58.112 32.000 17.47 8.47 0.00 2.40
3045 4086 7.337938 ACCTTGGTCAAATTTGTGAAAGAATT 58.662 30.769 17.47 5.64 0.00 2.17
3046 4087 7.828717 ACCTTGGTCAAATTTGTGAAAGAATTT 59.171 29.630 17.47 0.00 43.98 1.82
3047 4088 8.676401 CCTTGGTCAAATTTGTGAAAGAATTTT 58.324 29.630 17.47 0.00 39.27 1.82
3069 4110 4.862641 TTTTGGGGAGAGGAAGATAAGG 57.137 45.455 0.00 0.00 0.00 2.69
3070 4111 3.795755 TTGGGGAGAGGAAGATAAGGA 57.204 47.619 0.00 0.00 0.00 3.36
3071 4112 3.795755 TGGGGAGAGGAAGATAAGGAA 57.204 47.619 0.00 0.00 0.00 3.36
3072 4113 4.088634 TGGGGAGAGGAAGATAAGGAAA 57.911 45.455 0.00 0.00 0.00 3.13
3073 4114 4.444611 TGGGGAGAGGAAGATAAGGAAAA 58.555 43.478 0.00 0.00 0.00 2.29
3074 4115 4.855599 TGGGGAGAGGAAGATAAGGAAAAA 59.144 41.667 0.00 0.00 0.00 1.94
3075 4116 5.496168 TGGGGAGAGGAAGATAAGGAAAAAT 59.504 40.000 0.00 0.00 0.00 1.82
3076 4117 6.681093 TGGGGAGAGGAAGATAAGGAAAAATA 59.319 38.462 0.00 0.00 0.00 1.40
3077 4118 7.147302 TGGGGAGAGGAAGATAAGGAAAAATAG 60.147 40.741 0.00 0.00 0.00 1.73
3078 4119 7.072581 GGGGAGAGGAAGATAAGGAAAAATAGA 59.927 40.741 0.00 0.00 0.00 1.98
3079 4120 8.154203 GGGAGAGGAAGATAAGGAAAAATAGAG 58.846 40.741 0.00 0.00 0.00 2.43
3080 4121 8.710239 GGAGAGGAAGATAAGGAAAAATAGAGT 58.290 37.037 0.00 0.00 0.00 3.24
3081 4122 9.758651 GAGAGGAAGATAAGGAAAAATAGAGTC 57.241 37.037 0.00 0.00 0.00 3.36
3082 4123 9.500701 AGAGGAAGATAAGGAAAAATAGAGTCT 57.499 33.333 0.00 0.00 0.00 3.24
3088 4129 8.961634 AGATAAGGAAAAATAGAGTCTTTTGGC 58.038 33.333 0.00 0.00 0.00 4.52
3089 4130 8.885693 ATAAGGAAAAATAGAGTCTTTTGGCT 57.114 30.769 0.00 0.00 36.89 4.75
3090 4131 7.603180 AAGGAAAAATAGAGTCTTTTGGCTT 57.397 32.000 0.00 0.00 32.51 4.35
3091 4132 6.986250 AGGAAAAATAGAGTCTTTTGGCTTG 58.014 36.000 0.00 0.00 32.51 4.01
3092 4133 5.635280 GGAAAAATAGAGTCTTTTGGCTTGC 59.365 40.000 0.00 0.00 32.51 4.01
3093 4134 6.410942 AAAAATAGAGTCTTTTGGCTTGCT 57.589 33.333 0.00 0.00 32.51 3.91
3094 4135 7.309194 GGAAAAATAGAGTCTTTTGGCTTGCTA 60.309 37.037 0.00 0.00 32.51 3.49
3095 4136 7.524717 AAAATAGAGTCTTTTGGCTTGCTAA 57.475 32.000 0.00 0.00 32.51 3.09
3096 4137 7.524717 AAATAGAGTCTTTTGGCTTGCTAAA 57.475 32.000 0.00 0.05 32.51 1.85
3097 4138 4.837896 AGAGTCTTTTGGCTTGCTAAAC 57.162 40.909 3.69 0.00 32.51 2.01
3098 4139 4.207165 AGAGTCTTTTGGCTTGCTAAACA 58.793 39.130 3.69 0.00 32.51 2.83
3099 4140 4.036852 AGAGTCTTTTGGCTTGCTAAACAC 59.963 41.667 3.69 4.61 32.51 3.32
3100 4141 3.068165 AGTCTTTTGGCTTGCTAAACACC 59.932 43.478 3.69 0.00 0.00 4.16
3101 4142 2.364002 TCTTTTGGCTTGCTAAACACCC 59.636 45.455 3.69 0.00 0.00 4.61
3102 4143 1.781786 TTTGGCTTGCTAAACACCCA 58.218 45.000 0.05 0.00 0.00 4.51
3103 4144 2.008242 TTGGCTTGCTAAACACCCAT 57.992 45.000 0.00 0.00 31.77 4.00
3104 4145 1.255882 TGGCTTGCTAAACACCCATG 58.744 50.000 0.00 0.00 0.00 3.66
3105 4146 1.256812 GGCTTGCTAAACACCCATGT 58.743 50.000 0.00 0.00 42.46 3.21
3526 4567 3.935024 TACCTAGCTCCGCCACTG 58.065 61.111 0.00 0.00 0.00 3.66
3527 4568 2.423898 TACCTAGCTCCGCCACTGC 61.424 63.158 0.00 0.00 0.00 4.40
3528 4569 2.856039 TACCTAGCTCCGCCACTGCT 62.856 60.000 0.00 0.00 40.43 4.24
3529 4570 2.105930 CTAGCTCCGCCACTGCTC 59.894 66.667 0.00 0.00 38.15 4.26
3530 4571 2.679996 TAGCTCCGCCACTGCTCA 60.680 61.111 0.00 0.00 38.15 4.26
3540 4581 2.569059 GCCACTGCTCATGTGTATCAT 58.431 47.619 0.00 0.00 33.92 2.45
3547 4588 6.760298 CACTGCTCATGTGTATCATCTAAACT 59.240 38.462 0.00 0.00 34.09 2.66
3618 4659 8.522016 TGTTCTTAACATCGAGGATCAAACTCG 61.522 40.741 3.06 12.12 46.21 4.18
3701 4742 7.528307 CGTATCAGCTAAACCTAGTACTATGG 58.472 42.308 2.33 9.54 0.00 2.74
3814 4855 7.747155 TGGACATGAAGGTTTATTTCGTTTA 57.253 32.000 0.00 0.00 0.00 2.01
4087 5167 3.611766 AGAGCTGCACTAACGGTTTAT 57.388 42.857 1.02 0.00 0.00 1.40
4234 5323 7.221067 CGTCCTCTTTTACAGTATGATTCTGTC 59.779 40.741 8.01 0.00 43.76 3.51
4437 5540 7.604927 AGCATTAAATTGATTTGTGAATGCTGT 59.395 29.630 23.66 11.11 46.72 4.40
4528 5637 8.447053 GCTTTGTTGACCTTTCTATCTAAGAAG 58.553 37.037 0.00 0.00 44.95 2.85
4529 5638 7.907214 TTGTTGACCTTTCTATCTAAGAAGC 57.093 36.000 0.00 0.00 44.95 3.86
4530 5639 7.246171 TGTTGACCTTTCTATCTAAGAAGCT 57.754 36.000 0.00 0.00 44.95 3.74
4532 5641 8.251721 TGTTGACCTTTCTATCTAAGAAGCTAC 58.748 37.037 0.00 0.00 44.95 3.58
4533 5642 7.956328 TGACCTTTCTATCTAAGAAGCTACA 57.044 36.000 0.00 0.00 44.95 2.74
4534 5643 8.001881 TGACCTTTCTATCTAAGAAGCTACAG 57.998 38.462 0.00 0.00 44.95 2.74
4535 5644 6.811954 ACCTTTCTATCTAAGAAGCTACAGC 58.188 40.000 0.00 0.00 44.95 4.40
4742 6056 7.295340 TGATAGAACTGTAGCCTGTAGGATTA 58.705 38.462 1.17 0.00 37.39 1.75
4744 6058 6.412362 AGAACTGTAGCCTGTAGGATTATG 57.588 41.667 1.17 0.00 37.39 1.90
4766 6084 5.722290 TGGGGACATATGATAGAAGTACCA 58.278 41.667 10.38 2.00 34.80 3.25
4767 6085 5.780282 TGGGGACATATGATAGAAGTACCAG 59.220 44.000 10.38 0.00 34.80 4.00
4768 6086 5.780793 GGGGACATATGATAGAAGTACCAGT 59.219 44.000 10.38 0.00 34.80 4.00
4779 6097 2.901338 AGTACCAGTACCTCAGCTGA 57.099 50.000 17.19 17.19 36.75 4.26
5111 6450 2.414058 TTGTAAGCGCATGTTTGTGG 57.586 45.000 11.47 0.00 33.82 4.17
5154 6504 4.013267 ACCCATCCAATTGATCGAGATC 57.987 45.455 7.12 6.16 38.29 2.75
5191 6541 6.040166 CCCAGGTGAAGAATATTTCAATGGAG 59.960 42.308 16.95 8.79 42.85 3.86
5260 6610 1.421410 CCGACGAAAAGATCAGCCCG 61.421 60.000 0.00 0.00 0.00 6.13
5344 6694 6.864342 TCTTAGACCTACTATTGCAAGTGAC 58.136 40.000 4.94 0.00 0.00 3.67
5418 6772 1.939974 TAGCTTGGATGCGCTTGTAG 58.060 50.000 9.73 0.64 37.68 2.74
5448 6802 9.098355 TCTGTGATACTTGACATTTATAACTGC 57.902 33.333 2.90 0.00 0.00 4.40
5603 8382 4.309933 CAGTCACTTCAGAACATAGCACA 58.690 43.478 0.00 0.00 0.00 4.57
5604 8383 4.151335 CAGTCACTTCAGAACATAGCACAC 59.849 45.833 0.00 0.00 0.00 3.82
5625 8404 5.299279 ACACCACTGAACAGAAATACCAAAG 59.701 40.000 8.87 0.00 0.00 2.77
5632 8411 5.127845 TGAACAGAAATACCAAAGGTGCAAA 59.872 36.000 0.00 0.00 36.19 3.68
5633 8412 5.606348 ACAGAAATACCAAAGGTGCAAAA 57.394 34.783 0.00 0.00 36.19 2.44
5634 8413 5.356426 ACAGAAATACCAAAGGTGCAAAAC 58.644 37.500 0.00 0.00 36.19 2.43
5642 8421 3.365535 GGTGCAAAACCCTCGCAT 58.634 55.556 0.00 0.00 44.02 4.73
5643 8422 1.665442 GGTGCAAAACCCTCGCATT 59.335 52.632 0.00 0.00 44.02 3.56
5644 8423 0.885196 GGTGCAAAACCCTCGCATTA 59.115 50.000 0.00 0.00 44.02 1.90
5645 8424 1.476488 GGTGCAAAACCCTCGCATTAT 59.524 47.619 0.00 0.00 44.02 1.28
5650 8429 3.128589 GCAAAACCCTCGCATTATCTCAA 59.871 43.478 0.00 0.00 0.00 3.02
5803 8585 3.620821 GCAGAAAGCTATCCACTCTGTTC 59.379 47.826 0.00 0.00 41.15 3.18
5810 8592 2.706339 ATCCACTCTGTTCATCAGGC 57.294 50.000 0.00 0.00 43.76 4.85
5833 8658 1.325476 CCCCATTTCAGGCAGAAGGC 61.325 60.000 0.00 0.00 43.74 4.35
5892 8717 4.082125 GACCCATTCCCATACATTCATCC 58.918 47.826 0.00 0.00 0.00 3.51
5983 8808 5.178797 ACCCTGACGATAGATTTCAAAGTG 58.821 41.667 0.00 0.00 41.38 3.16
5985 8810 6.051717 CCCTGACGATAGATTTCAAAGTGAT 58.948 40.000 0.00 0.00 41.38 3.06
6028 8853 4.124851 ACGGACCTGTATCTGATGAAAC 57.875 45.455 0.00 0.00 0.00 2.78
6067 8892 5.416271 AAGGCGTATAGAAACTGAAAGGA 57.584 39.130 0.00 0.00 39.30 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 146 7.397892 TGAACATTTCTTTTGTAGTCCAACA 57.602 32.000 0.00 0.00 31.20 3.33
146 147 7.920682 ACATGAACATTTCTTTTGTAGTCCAAC 59.079 33.333 0.00 0.00 31.20 3.77
149 150 7.425606 ACACATGAACATTTCTTTTGTAGTCC 58.574 34.615 0.00 0.00 29.38 3.85
215 216 9.956640 AGAGAGTCATGAATGTTTCTTAAAGAT 57.043 29.630 0.00 0.00 0.00 2.40
406 407 9.832445 GAACAGAGGGAGTACATGAATATTTAA 57.168 33.333 0.00 0.00 0.00 1.52
407 408 8.429641 GGAACAGAGGGAGTACATGAATATTTA 58.570 37.037 0.00 0.00 0.00 1.40
418 420 9.145442 ACTTATATTTAGGAACAGAGGGAGTAC 57.855 37.037 0.00 0.00 0.00 2.73
419 421 9.364653 GACTTATATTTAGGAACAGAGGGAGTA 57.635 37.037 0.00 0.00 0.00 2.59
420 422 8.068733 AGACTTATATTTAGGAACAGAGGGAGT 58.931 37.037 0.00 0.00 0.00 3.85
421 423 8.485578 AGACTTATATTTAGGAACAGAGGGAG 57.514 38.462 0.00 0.00 0.00 4.30
422 424 8.855804 AAGACTTATATTTAGGAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
423 425 9.907229 AAAAGACTTATATTTAGGAACAGAGGG 57.093 33.333 0.00 0.00 0.00 4.30
441 443 9.847224 TTTTGTAGTGGAATCTCTAAAAGACTT 57.153 29.630 0.00 0.00 36.65 3.01
442 444 9.274206 GTTTTGTAGTGGAATCTCTAAAAGACT 57.726 33.333 0.00 0.00 36.65 3.24
443 445 9.274206 AGTTTTGTAGTGGAATCTCTAAAAGAC 57.726 33.333 0.00 0.00 36.65 3.01
450 452 7.974501 CGTATGTAGTTTTGTAGTGGAATCTCT 59.025 37.037 0.00 0.00 0.00 3.10
451 453 7.972277 TCGTATGTAGTTTTGTAGTGGAATCTC 59.028 37.037 0.00 0.00 0.00 2.75
452 454 7.833786 TCGTATGTAGTTTTGTAGTGGAATCT 58.166 34.615 0.00 0.00 0.00 2.40
453 455 8.470040 TTCGTATGTAGTTTTGTAGTGGAATC 57.530 34.615 0.00 0.00 0.00 2.52
454 456 8.879759 CATTCGTATGTAGTTTTGTAGTGGAAT 58.120 33.333 0.00 0.00 0.00 3.01
455 457 7.874016 ACATTCGTATGTAGTTTTGTAGTGGAA 59.126 33.333 5.81 0.00 43.12 3.53
456 458 7.380536 ACATTCGTATGTAGTTTTGTAGTGGA 58.619 34.615 5.81 0.00 43.12 4.02
457 459 7.591006 ACATTCGTATGTAGTTTTGTAGTGG 57.409 36.000 5.81 0.00 43.12 4.00
495 497 9.507329 AGCAAAATGAGTGAATCTAAACTCTAA 57.493 29.630 4.62 0.00 42.72 2.10
496 498 9.507329 AAGCAAAATGAGTGAATCTAAACTCTA 57.493 29.630 4.62 0.00 42.72 2.43
497 499 7.992754 AGCAAAATGAGTGAATCTAAACTCT 57.007 32.000 4.62 0.00 42.72 3.24
498 500 7.479916 CGAAGCAAAATGAGTGAATCTAAACTC 59.520 37.037 0.00 0.00 42.61 3.01
499 501 7.041098 ACGAAGCAAAATGAGTGAATCTAAACT 60.041 33.333 0.00 0.00 0.00 2.66
500 502 7.078228 ACGAAGCAAAATGAGTGAATCTAAAC 58.922 34.615 0.00 0.00 0.00 2.01
501 503 7.202016 ACGAAGCAAAATGAGTGAATCTAAA 57.798 32.000 0.00 0.00 0.00 1.85
502 504 6.801539 ACGAAGCAAAATGAGTGAATCTAA 57.198 33.333 0.00 0.00 0.00 2.10
503 505 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
504 506 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
505 507 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
506 508 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
507 509 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
508 510 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
509 511 6.408858 ACTACATACGAAGCAAAATGAGTG 57.591 37.500 0.00 0.00 0.00 3.51
510 512 5.581085 GGACTACATACGAAGCAAAATGAGT 59.419 40.000 0.00 0.00 0.00 3.41
511 513 5.580691 TGGACTACATACGAAGCAAAATGAG 59.419 40.000 0.00 0.00 0.00 2.90
512 514 5.483811 TGGACTACATACGAAGCAAAATGA 58.516 37.500 0.00 0.00 0.00 2.57
513 515 5.794687 TGGACTACATACGAAGCAAAATG 57.205 39.130 0.00 0.00 0.00 2.32
514 516 7.224753 CACTATGGACTACATACGAAGCAAAAT 59.775 37.037 0.00 0.00 41.03 1.82
515 517 6.533723 CACTATGGACTACATACGAAGCAAAA 59.466 38.462 0.00 0.00 41.03 2.44
516 518 6.040247 CACTATGGACTACATACGAAGCAAA 58.960 40.000 0.00 0.00 41.03 3.68
517 519 5.451381 CCACTATGGACTACATACGAAGCAA 60.451 44.000 0.00 0.00 40.96 3.91
518 520 4.037565 CCACTATGGACTACATACGAAGCA 59.962 45.833 0.00 0.00 40.96 3.91
519 521 4.277672 TCCACTATGGACTACATACGAAGC 59.722 45.833 0.00 0.00 42.67 3.86
532 534 8.380742 AGTCTTTTTAGAGATTCCACTATGGA 57.619 34.615 0.00 0.00 46.61 3.41
558 560 9.856162 GTGTTCCCAATTACTCCCTAAAATATA 57.144 33.333 0.00 0.00 0.00 0.86
559 561 8.340757 TGTGTTCCCAATTACTCCCTAAAATAT 58.659 33.333 0.00 0.00 0.00 1.28
560 562 7.700846 TGTGTTCCCAATTACTCCCTAAAATA 58.299 34.615 0.00 0.00 0.00 1.40
561 563 6.557568 TGTGTTCCCAATTACTCCCTAAAAT 58.442 36.000 0.00 0.00 0.00 1.82
562 564 5.954757 TGTGTTCCCAATTACTCCCTAAAA 58.045 37.500 0.00 0.00 0.00 1.52
563 565 5.586155 TGTGTTCCCAATTACTCCCTAAA 57.414 39.130 0.00 0.00 0.00 1.85
564 566 5.789574 ATGTGTTCCCAATTACTCCCTAA 57.210 39.130 0.00 0.00 0.00 2.69
565 567 7.128109 TGAATATGTGTTCCCAATTACTCCCTA 59.872 37.037 0.00 0.00 0.00 3.53
566 568 5.994416 ATATGTGTTCCCAATTACTCCCT 57.006 39.130 0.00 0.00 0.00 4.20
567 569 6.126409 TGAATATGTGTTCCCAATTACTCCC 58.874 40.000 0.00 0.00 0.00 4.30
568 570 7.651808 CATGAATATGTGTTCCCAATTACTCC 58.348 38.462 0.00 0.00 0.00 3.85
569 571 7.141363 GCATGAATATGTGTTCCCAATTACTC 58.859 38.462 0.00 0.00 36.65 2.59
570 572 6.040842 GGCATGAATATGTGTTCCCAATTACT 59.959 38.462 0.00 0.00 36.65 2.24
574 576 4.549668 AGGCATGAATATGTGTTCCCAAT 58.450 39.130 0.00 0.00 36.65 3.16
577 579 7.094205 CCTTATTAGGCATGAATATGTGTTCCC 60.094 40.741 0.00 0.00 36.65 3.97
578 580 7.094205 CCCTTATTAGGCATGAATATGTGTTCC 60.094 40.741 0.00 0.00 40.50 3.62
580 582 7.526041 TCCCTTATTAGGCATGAATATGTGTT 58.474 34.615 0.00 0.00 40.50 3.32
584 586 8.585471 AACATCCCTTATTAGGCATGAATATG 57.415 34.615 8.68 0.00 41.57 1.78
587 589 6.856757 AGAACATCCCTTATTAGGCATGAAT 58.143 36.000 8.68 0.00 41.57 2.57
589 591 5.608437 AGAGAACATCCCTTATTAGGCATGA 59.392 40.000 8.68 0.00 41.57 3.07
602 604 2.860735 CGAATTGACGAGAGAACATCCC 59.139 50.000 0.00 0.00 35.09 3.85
603 605 3.548268 GTCGAATTGACGAGAGAACATCC 59.452 47.826 0.00 0.00 42.88 3.51
604 606 4.746836 GTCGAATTGACGAGAGAACATC 57.253 45.455 0.00 0.00 42.88 3.06
623 672 4.846779 TCAAACTGCTAATGGTTTGGTC 57.153 40.909 15.36 0.00 46.86 4.02
654 703 5.748592 ACTTGTCAATGCTACGAGTTTTTC 58.251 37.500 0.00 0.00 38.20 2.29
657 706 6.092259 GGATAACTTGTCAATGCTACGAGTTT 59.908 38.462 12.67 3.57 45.25 2.66
659 708 5.109903 GGATAACTTGTCAATGCTACGAGT 58.890 41.667 0.00 0.00 42.24 4.18
660 709 4.508124 GGGATAACTTGTCAATGCTACGAG 59.492 45.833 0.00 0.00 34.94 4.18
661 710 4.161565 AGGGATAACTTGTCAATGCTACGA 59.838 41.667 0.00 0.00 0.00 3.43
662 711 4.271049 CAGGGATAACTTGTCAATGCTACG 59.729 45.833 0.00 0.00 0.00 3.51
666 715 5.591877 AGAATCAGGGATAACTTGTCAATGC 59.408 40.000 0.00 0.00 0.00 3.56
779 829 5.422145 GCTCCAGTTTTATGGCAATTTGAT 58.578 37.500 0.00 0.00 40.41 2.57
782 832 3.055167 GGGCTCCAGTTTTATGGCAATTT 60.055 43.478 0.00 0.00 40.41 1.82
804 854 0.249322 CATACTTACGGACCGGCCTG 60.249 60.000 20.00 0.00 0.00 4.85
806 856 1.068585 CCATACTTACGGACCGGCC 59.931 63.158 20.00 2.44 0.00 6.13
808 858 1.068585 GGCCATACTTACGGACCGG 59.931 63.158 20.00 0.00 0.00 5.28
809 859 1.068585 GGGCCATACTTACGGACCG 59.931 63.158 13.61 13.61 41.89 4.79
811 861 0.529119 CGTGGGCCATACTTACGGAC 60.529 60.000 10.70 0.00 0.00 4.79
815 865 1.208776 AGTTCCGTGGGCCATACTTAC 59.791 52.381 10.70 5.06 0.00 2.34
819 869 2.112815 GCAGTTCCGTGGGCCATAC 61.113 63.158 10.70 6.21 0.00 2.39
820 870 2.270850 GCAGTTCCGTGGGCCATA 59.729 61.111 10.70 0.00 0.00 2.74
827 877 4.012895 GTGGTGCGCAGTTCCGTG 62.013 66.667 12.22 0.00 0.00 4.94
829 879 4.988598 AGGTGGTGCGCAGTTCCG 62.989 66.667 12.22 0.00 0.00 4.30
853 923 4.020928 AGGGGTTTTTAGGCAAAATTACGG 60.021 41.667 0.00 0.00 36.72 4.02
856 926 4.322123 GCGAGGGGTTTTTAGGCAAAATTA 60.322 41.667 0.00 0.00 36.72 1.40
862 932 1.673009 CGCGAGGGGTTTTTAGGCA 60.673 57.895 0.00 0.00 0.00 4.75
863 933 1.366854 CTCGCGAGGGGTTTTTAGGC 61.367 60.000 28.40 0.00 0.00 3.93
866 936 0.388907 CGACTCGCGAGGGGTTTTTA 60.389 55.000 36.93 0.00 44.57 1.52
919 994 2.261729 GAGTTTGGAGAAGAGGGGAGT 58.738 52.381 0.00 0.00 0.00 3.85
1042 1117 3.967335 CGATCGAGACCGGGAGCC 61.967 72.222 10.26 0.00 36.24 4.70
1312 1523 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1313 1524 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
1331 1542 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
1341 1552 9.864034 CGTATGTTATAGTCCATTTGAAATGTC 57.136 33.333 15.93 9.10 0.00 3.06
1342 1553 8.836413 CCGTATGTTATAGTCCATTTGAAATGT 58.164 33.333 15.93 1.43 0.00 2.71
1343 1554 9.051679 TCCGTATGTTATAGTCCATTTGAAATG 57.948 33.333 10.84 10.84 0.00 2.32
1344 1555 9.793259 ATCCGTATGTTATAGTCCATTTGAAAT 57.207 29.630 0.00 0.00 0.00 2.17
1345 1556 9.051679 CATCCGTATGTTATAGTCCATTTGAAA 57.948 33.333 0.00 0.00 0.00 2.69
1346 1557 8.208224 ACATCCGTATGTTATAGTCCATTTGAA 58.792 33.333 0.00 0.00 44.07 2.69
1347 1558 7.732025 ACATCCGTATGTTATAGTCCATTTGA 58.268 34.615 0.00 0.00 44.07 2.69
1348 1559 7.962964 ACATCCGTATGTTATAGTCCATTTG 57.037 36.000 0.00 0.00 44.07 2.32
1349 1560 9.871238 GATACATCCGTATGTTATAGTCCATTT 57.129 33.333 0.00 0.00 44.07 2.32
1350 1561 9.256228 AGATACATCCGTATGTTATAGTCCATT 57.744 33.333 0.00 0.00 44.07 3.16
1351 1562 8.824756 AGATACATCCGTATGTTATAGTCCAT 57.175 34.615 0.00 0.00 44.07 3.41
1352 1563 8.520351 CAAGATACATCCGTATGTTATAGTCCA 58.480 37.037 0.00 0.00 44.07 4.02
1353 1564 8.737175 TCAAGATACATCCGTATGTTATAGTCC 58.263 37.037 0.00 0.00 44.07 3.85
1354 1565 9.557338 GTCAAGATACATCCGTATGTTATAGTC 57.443 37.037 0.00 0.00 44.07 2.59
1355 1566 9.074576 TGTCAAGATACATCCGTATGTTATAGT 57.925 33.333 0.00 0.00 44.07 2.12
1360 1571 9.778741 AAATATGTCAAGATACATCCGTATGTT 57.221 29.630 0.00 0.00 44.07 2.71
1363 1658 9.219603 CCAAAATATGTCAAGATACATCCGTAT 57.780 33.333 0.00 0.00 40.52 3.06
1364 1659 8.425703 TCCAAAATATGTCAAGATACATCCGTA 58.574 33.333 0.00 0.00 40.52 4.02
1366 1661 7.442364 ACTCCAAAATATGTCAAGATACATCCG 59.558 37.037 0.00 0.00 40.52 4.18
1385 1680 9.585099 GCAAAATGAATGAATATACACTCCAAA 57.415 29.630 0.00 0.00 0.00 3.28
1386 1681 8.970020 AGCAAAATGAATGAATATACACTCCAA 58.030 29.630 0.00 0.00 0.00 3.53
1387 1682 8.523915 AGCAAAATGAATGAATATACACTCCA 57.476 30.769 0.00 0.00 0.00 3.86
1388 1683 8.078596 GGAGCAAAATGAATGAATATACACTCC 58.921 37.037 0.00 0.00 0.00 3.85
1389 1684 7.800380 CGGAGCAAAATGAATGAATATACACTC 59.200 37.037 0.00 0.00 0.00 3.51
1390 1685 7.283127 ACGGAGCAAAATGAATGAATATACACT 59.717 33.333 0.00 0.00 0.00 3.55
1393 1688 9.546909 CATACGGAGCAAAATGAATGAATATAC 57.453 33.333 0.00 0.00 0.00 1.47
1394 1689 9.283768 ACATACGGAGCAAAATGAATGAATATA 57.716 29.630 0.00 0.00 0.00 0.86
1395 1690 8.169977 ACATACGGAGCAAAATGAATGAATAT 57.830 30.769 0.00 0.00 0.00 1.28
1396 1691 7.566760 ACATACGGAGCAAAATGAATGAATA 57.433 32.000 0.00 0.00 0.00 1.75
1397 1692 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
1398 1693 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
1399 1694 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
1400 1695 6.037062 TGACTACATACGGAGCAAAATGAATG 59.963 38.462 0.00 0.00 0.00 2.67
1401 1696 6.037172 GTGACTACATACGGAGCAAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
1402 1697 5.350365 GTGACTACATACGGAGCAAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
1403 1698 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
1404 1699 4.629634 TGTGACTACATACGGAGCAAAATG 59.370 41.667 0.00 0.00 0.00 2.32
1405 1700 4.827692 TGTGACTACATACGGAGCAAAAT 58.172 39.130 0.00 0.00 0.00 1.82
1406 1701 4.260139 TGTGACTACATACGGAGCAAAA 57.740 40.909 0.00 0.00 0.00 2.44
1407 1702 3.945981 TGTGACTACATACGGAGCAAA 57.054 42.857 0.00 0.00 0.00 3.68
1408 1703 3.194755 ACATGTGACTACATACGGAGCAA 59.805 43.478 0.00 0.00 45.53 3.91
1409 1704 2.758423 ACATGTGACTACATACGGAGCA 59.242 45.455 0.00 0.00 45.53 4.26
1410 1705 3.438297 ACATGTGACTACATACGGAGC 57.562 47.619 0.00 0.00 45.53 4.70
1411 1706 4.112634 CCAACATGTGACTACATACGGAG 58.887 47.826 0.00 0.00 45.53 4.63
1412 1707 3.764972 TCCAACATGTGACTACATACGGA 59.235 43.478 0.00 0.00 45.53 4.69
1413 1708 4.118093 TCCAACATGTGACTACATACGG 57.882 45.455 0.00 0.00 45.53 4.02
1414 1709 6.042777 AGATTCCAACATGTGACTACATACG 58.957 40.000 0.00 0.00 45.53 3.06
1415 1710 7.268586 AGAGATTCCAACATGTGACTACATAC 58.731 38.462 0.00 0.00 45.53 2.39
1416 1711 7.423844 AGAGATTCCAACATGTGACTACATA 57.576 36.000 0.00 0.00 45.53 2.29
1418 1713 5.745312 AGAGATTCCAACATGTGACTACA 57.255 39.130 0.00 0.00 41.89 2.74
1419 1714 8.547967 TTTTAGAGATTCCAACATGTGACTAC 57.452 34.615 0.00 0.00 0.00 2.73
1420 1715 9.739276 ATTTTTAGAGATTCCAACATGTGACTA 57.261 29.630 0.00 0.00 0.00 2.59
1421 1716 8.641498 ATTTTTAGAGATTCCAACATGTGACT 57.359 30.769 0.00 0.00 0.00 3.41
1422 1717 9.774742 GTATTTTTAGAGATTCCAACATGTGAC 57.225 33.333 0.00 0.00 0.00 3.67
1423 1718 9.739276 AGTATTTTTAGAGATTCCAACATGTGA 57.261 29.630 0.00 0.00 0.00 3.58
1443 1738 9.643778 TCCCTCCATCCCTAAATATAAGTATTT 57.356 33.333 0.00 0.00 41.92 1.40
1444 1739 9.285359 CTCCCTCCATCCCTAAATATAAGTATT 57.715 37.037 0.00 0.00 31.89 1.89
1445 1740 8.418643 ACTCCCTCCATCCCTAAATATAAGTAT 58.581 37.037 0.00 0.00 0.00 2.12
1446 1741 7.786968 ACTCCCTCCATCCCTAAATATAAGTA 58.213 38.462 0.00 0.00 0.00 2.24
1447 1742 6.644882 ACTCCCTCCATCCCTAAATATAAGT 58.355 40.000 0.00 0.00 0.00 2.24
1448 1743 7.901861 ACTACTCCCTCCATCCCTAAATATAAG 59.098 40.741 0.00 0.00 0.00 1.73
1449 1744 7.786968 ACTACTCCCTCCATCCCTAAATATAA 58.213 38.462 0.00 0.00 0.00 0.98
1450 1745 7.372060 ACTACTCCCTCCATCCCTAAATATA 57.628 40.000 0.00 0.00 0.00 0.86
1451 1746 6.248080 ACTACTCCCTCCATCCCTAAATAT 57.752 41.667 0.00 0.00 0.00 1.28
1452 1747 5.698369 ACTACTCCCTCCATCCCTAAATA 57.302 43.478 0.00 0.00 0.00 1.40
1453 1748 4.578149 ACTACTCCCTCCATCCCTAAAT 57.422 45.455 0.00 0.00 0.00 1.40
1454 1749 4.363546 AACTACTCCCTCCATCCCTAAA 57.636 45.455 0.00 0.00 0.00 1.85
1455 1750 4.363546 AAACTACTCCCTCCATCCCTAA 57.636 45.455 0.00 0.00 0.00 2.69
1456 1751 4.485021 ACTAAACTACTCCCTCCATCCCTA 59.515 45.833 0.00 0.00 0.00 3.53
1457 1752 2.972153 AAACTACTCCCTCCATCCCT 57.028 50.000 0.00 0.00 0.00 4.20
1458 1753 3.655384 ACTAAACTACTCCCTCCATCCC 58.345 50.000 0.00 0.00 0.00 3.85
1459 1754 5.425862 AGAAACTAAACTACTCCCTCCATCC 59.574 44.000 0.00 0.00 0.00 3.51
1460 1755 6.154706 TGAGAAACTAAACTACTCCCTCCATC 59.845 42.308 0.00 0.00 0.00 3.51
1461 1756 6.023603 TGAGAAACTAAACTACTCCCTCCAT 58.976 40.000 0.00 0.00 0.00 3.41
1462 1757 5.399991 TGAGAAACTAAACTACTCCCTCCA 58.600 41.667 0.00 0.00 0.00 3.86
1463 1758 5.624967 GCTGAGAAACTAAACTACTCCCTCC 60.625 48.000 0.00 0.00 0.00 4.30
1464 1759 5.047235 TGCTGAGAAACTAAACTACTCCCTC 60.047 44.000 0.00 0.00 0.00 4.30
1465 1760 4.838986 TGCTGAGAAACTAAACTACTCCCT 59.161 41.667 0.00 0.00 0.00 4.20
1466 1761 5.148651 TGCTGAGAAACTAAACTACTCCC 57.851 43.478 0.00 0.00 0.00 4.30
1467 1762 5.635700 CACTGCTGAGAAACTAAACTACTCC 59.364 44.000 0.00 0.00 0.00 3.85
1468 1763 6.217294 ACACTGCTGAGAAACTAAACTACTC 58.783 40.000 0.00 0.00 0.00 2.59
1469 1764 6.163135 ACACTGCTGAGAAACTAAACTACT 57.837 37.500 0.00 0.00 0.00 2.57
1470 1765 7.941795 TTACACTGCTGAGAAACTAAACTAC 57.058 36.000 0.00 0.00 0.00 2.73
1471 1766 8.988934 CATTTACACTGCTGAGAAACTAAACTA 58.011 33.333 0.00 0.00 0.00 2.24
1472 1767 7.499232 ACATTTACACTGCTGAGAAACTAAACT 59.501 33.333 0.00 0.00 0.00 2.66
1497 1792 4.041049 TCAACATTTGCGTCACAATGAAC 58.959 39.130 14.72 0.00 38.31 3.18
1502 1797 1.403323 TGCTCAACATTTGCGTCACAA 59.597 42.857 0.00 0.00 36.13 3.33
1539 1834 0.793861 CGTTTCGCCCTTGATTCGAA 59.206 50.000 0.00 0.00 39.97 3.71
1550 1845 0.593263 ATCGTACGATCCGTTTCGCC 60.593 55.000 24.66 0.00 42.82 5.54
1581 1876 7.010738 ACAAATTTGTGTTTCTGAATCAGCAAG 59.989 33.333 22.71 0.00 40.49 4.01
1605 1900 8.918202 AACTGTTATAAAACAAGGAGATCACA 57.082 30.769 0.00 0.00 44.79 3.58
1642 1938 3.178267 CACAAACGATTGCACAACTTGT 58.822 40.909 5.20 0.00 40.34 3.16
1656 1953 4.981674 ACTGCCAATTAATGAACACAAACG 59.018 37.500 0.00 0.00 0.00 3.60
1680 1978 3.383505 TGGACCTACGACTGATTGTATGG 59.616 47.826 0.00 0.00 0.00 2.74
1686 1984 0.456221 CGCTGGACCTACGACTGATT 59.544 55.000 0.96 0.00 0.00 2.57
1692 1990 0.459585 GAATTGCGCTGGACCTACGA 60.460 55.000 9.73 0.00 0.00 3.43
1693 1991 0.739462 TGAATTGCGCTGGACCTACG 60.739 55.000 9.73 2.74 0.00 3.51
1694 1992 1.668419 ATGAATTGCGCTGGACCTAC 58.332 50.000 9.73 0.00 0.00 3.18
1736 2107 3.007290 AGCAGCTCTGAAGTGACATGTTA 59.993 43.478 0.00 0.00 0.00 2.41
1739 2110 2.096220 AGCAGCTCTGAAGTGACATG 57.904 50.000 0.29 0.00 0.00 3.21
1740 2111 2.038164 TCAAGCAGCTCTGAAGTGACAT 59.962 45.455 0.00 0.00 0.00 3.06
1742 2113 2.160822 TCAAGCAGCTCTGAAGTGAC 57.839 50.000 0.00 0.00 0.00 3.67
1749 2120 2.717580 TTGCAAATCAAGCAGCTCTG 57.282 45.000 0.00 0.00 43.75 3.35
1754 2125 8.025243 AGAACAAAATATTGCAAATCAAGCAG 57.975 30.769 1.71 0.00 43.75 4.24
1787 2417 7.894376 ATATCTGAAACCAACAATTGCTTTG 57.106 32.000 5.05 3.56 41.36 2.77
1794 2424 5.241506 CCGCCATATATCTGAAACCAACAAT 59.758 40.000 0.00 0.00 0.00 2.71
1851 2481 0.842030 AGGCAGTGGATCCAAGGTCA 60.842 55.000 18.20 0.00 0.00 4.02
1865 2499 0.313043 CAAAAGTGCAGGTCAGGCAG 59.687 55.000 0.00 0.00 42.85 4.85
1933 2651 7.864379 CCAAAATAGCCTAAATGCAGAACATAG 59.136 37.037 0.00 0.00 38.34 2.23
1978 2696 3.325716 AGTTCTCCCTTGGTTAAGCGTAA 59.674 43.478 0.00 0.00 32.40 3.18
2011 2730 4.081198 TGTTTTCATTTCCTTGGCAAGTGT 60.081 37.500 24.57 5.87 0.00 3.55
2103 2879 6.245724 GTCCCATAATGTAAGACGTTTTTCG 58.754 40.000 0.00 0.00 46.00 3.46
2104 2880 6.245724 CGTCCCATAATGTAAGACGTTTTTC 58.754 40.000 0.00 0.00 43.89 2.29
2105 2881 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
2111 2887 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
2117 2893 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
2122 2898 2.852714 TTATTACTCCCTCCGTCCCA 57.147 50.000 0.00 0.00 0.00 4.37
2123 2899 6.370186 AATATTTATTACTCCCTCCGTCCC 57.630 41.667 0.00 0.00 0.00 4.46
2124 2900 7.935210 TGAAAATATTTATTACTCCCTCCGTCC 59.065 37.037 0.01 0.00 0.00 4.79
2125 2901 8.897872 TGAAAATATTTATTACTCCCTCCGTC 57.102 34.615 0.01 0.00 0.00 4.79
2233 3171 6.128553 TGAGCGAAAGTATGAATGTGTTTCTC 60.129 38.462 0.00 0.00 35.23 2.87
2234 3172 5.700832 TGAGCGAAAGTATGAATGTGTTTCT 59.299 36.000 0.00 0.00 35.23 2.52
2347 3305 5.679734 ACTGAGCCAGCGAATTATTTATG 57.320 39.130 2.50 0.00 34.37 1.90
2349 3307 4.201910 GCAACTGAGCCAGCGAATTATTTA 60.202 41.667 2.50 0.00 34.37 1.40
2350 3308 3.428045 GCAACTGAGCCAGCGAATTATTT 60.428 43.478 2.50 0.00 34.37 1.40
2370 3328 5.006455 CACATAAAGCACAACAAACAATGCA 59.994 36.000 0.00 0.00 40.63 3.96
2413 3371 1.106944 AAGAACAGCCCCAACAACCG 61.107 55.000 0.00 0.00 0.00 4.44
2415 3373 5.007682 TCTTATAAGAACAGCCCCAACAAC 58.992 41.667 12.87 0.00 30.73 3.32
2444 3402 4.621274 GCATGTTAGTGGACAAATGGCAAT 60.621 41.667 0.00 0.00 32.47 3.56
2463 3421 4.183865 TCGAGAGGAAAATGTACTGCATG 58.816 43.478 0.00 0.00 37.96 4.06
2509 3484 5.954296 AGCAATGATTTAAGATCATCGGG 57.046 39.130 11.21 7.46 37.75 5.14
2653 3631 1.383803 AGAGATCAGAGGGGTGGGC 60.384 63.158 0.00 0.00 0.00 5.36
2870 3910 4.906618 TGAAATCTTACAGGGTTCTGACC 58.093 43.478 0.00 0.00 43.49 4.02
2893 3933 1.866483 ATTGGGTGATGGGAGCAGCA 61.866 55.000 0.00 0.00 35.57 4.41
2902 3942 2.674852 CACGAGTTCTGATTGGGTGATG 59.325 50.000 0.00 0.00 0.00 3.07
2929 3969 9.553064 AGCAAGTTGAGAACCATTAATATCTAG 57.447 33.333 7.16 0.00 0.00 2.43
2971 4012 2.815647 GTAGCTCCGCCACTGCAC 60.816 66.667 0.00 0.00 37.32 4.57
2974 4015 2.094659 CAACGTAGCTCCGCCACTG 61.095 63.158 0.00 0.00 0.00 3.66
2975 4016 1.812686 TTCAACGTAGCTCCGCCACT 61.813 55.000 0.00 0.00 0.00 4.00
2977 4018 1.080093 CTTCAACGTAGCTCCGCCA 60.080 57.895 0.00 0.00 0.00 5.69
2978 4019 1.810030 CCTTCAACGTAGCTCCGCC 60.810 63.158 0.00 0.00 0.00 6.13
2979 4020 2.453638 GCCTTCAACGTAGCTCCGC 61.454 63.158 0.00 0.00 0.00 5.54
2980 4021 1.078759 CAGCCTTCAACGTAGCTCCG 61.079 60.000 0.00 0.00 31.93 4.63
2981 4022 1.362406 GCAGCCTTCAACGTAGCTCC 61.362 60.000 0.00 0.00 31.93 4.70
2982 4023 0.670546 TGCAGCCTTCAACGTAGCTC 60.671 55.000 0.00 0.00 31.93 4.09
2983 4024 0.671781 CTGCAGCCTTCAACGTAGCT 60.672 55.000 0.00 0.00 35.52 3.32
2984 4025 1.639298 CCTGCAGCCTTCAACGTAGC 61.639 60.000 8.66 0.00 0.00 3.58
2985 4026 1.021390 CCCTGCAGCCTTCAACGTAG 61.021 60.000 8.66 0.00 0.00 3.51
2986 4027 1.003839 CCCTGCAGCCTTCAACGTA 60.004 57.895 8.66 0.00 0.00 3.57
2987 4028 2.281761 CCCTGCAGCCTTCAACGT 60.282 61.111 8.66 0.00 0.00 3.99
2988 4029 3.058160 CCCCTGCAGCCTTCAACG 61.058 66.667 8.66 0.00 0.00 4.10
2989 4030 3.376918 GCCCCTGCAGCCTTCAAC 61.377 66.667 8.66 0.00 37.47 3.18
3018 4059 6.105333 TCTTTCACAAATTTGACCAAGGTTG 58.895 36.000 24.64 9.66 0.00 3.77
3019 4060 6.293004 TCTTTCACAAATTTGACCAAGGTT 57.707 33.333 24.64 0.00 0.00 3.50
3020 4061 5.930837 TCTTTCACAAATTTGACCAAGGT 57.069 34.783 24.64 0.00 0.00 3.50
3021 4062 7.790823 AATTCTTTCACAAATTTGACCAAGG 57.209 32.000 24.64 12.97 0.00 3.61
3047 4088 4.855599 TCCTTATCTTCCTCTCCCCAAAAA 59.144 41.667 0.00 0.00 0.00 1.94
3048 4089 4.444611 TCCTTATCTTCCTCTCCCCAAAA 58.555 43.478 0.00 0.00 0.00 2.44
3049 4090 4.088634 TCCTTATCTTCCTCTCCCCAAA 57.911 45.455 0.00 0.00 0.00 3.28
3050 4091 3.795755 TCCTTATCTTCCTCTCCCCAA 57.204 47.619 0.00 0.00 0.00 4.12
3051 4092 3.795755 TTCCTTATCTTCCTCTCCCCA 57.204 47.619 0.00 0.00 0.00 4.96
3052 4093 5.452341 TTTTTCCTTATCTTCCTCTCCCC 57.548 43.478 0.00 0.00 0.00 4.81
3053 4094 8.035448 TCTATTTTTCCTTATCTTCCTCTCCC 57.965 38.462 0.00 0.00 0.00 4.30
3054 4095 8.710239 ACTCTATTTTTCCTTATCTTCCTCTCC 58.290 37.037 0.00 0.00 0.00 3.71
3055 4096 9.758651 GACTCTATTTTTCCTTATCTTCCTCTC 57.241 37.037 0.00 0.00 0.00 3.20
3056 4097 9.500701 AGACTCTATTTTTCCTTATCTTCCTCT 57.499 33.333 0.00 0.00 0.00 3.69
3062 4103 8.961634 GCCAAAAGACTCTATTTTTCCTTATCT 58.038 33.333 0.00 0.00 0.00 1.98
3063 4104 8.961634 AGCCAAAAGACTCTATTTTTCCTTATC 58.038 33.333 0.00 0.00 0.00 1.75
3064 4105 8.885693 AGCCAAAAGACTCTATTTTTCCTTAT 57.114 30.769 0.00 0.00 0.00 1.73
3065 4106 8.576442 CAAGCCAAAAGACTCTATTTTTCCTTA 58.424 33.333 0.00 0.00 0.00 2.69
3066 4107 7.436933 CAAGCCAAAAGACTCTATTTTTCCTT 58.563 34.615 0.00 0.00 0.00 3.36
3067 4108 6.517362 GCAAGCCAAAAGACTCTATTTTTCCT 60.517 38.462 0.00 0.00 0.00 3.36
3068 4109 5.635280 GCAAGCCAAAAGACTCTATTTTTCC 59.365 40.000 0.00 0.00 0.00 3.13
3069 4110 6.450545 AGCAAGCCAAAAGACTCTATTTTTC 58.549 36.000 0.00 0.00 0.00 2.29
3070 4111 6.410942 AGCAAGCCAAAAGACTCTATTTTT 57.589 33.333 0.00 0.00 0.00 1.94
3071 4112 7.524717 TTAGCAAGCCAAAAGACTCTATTTT 57.475 32.000 0.00 0.00 0.00 1.82
3072 4113 7.014230 TGTTTAGCAAGCCAAAAGACTCTATTT 59.986 33.333 0.00 0.00 0.00 1.40
3073 4114 6.490040 TGTTTAGCAAGCCAAAAGACTCTATT 59.510 34.615 0.00 0.00 0.00 1.73
3074 4115 6.003950 TGTTTAGCAAGCCAAAAGACTCTAT 58.996 36.000 0.00 0.00 0.00 1.98
3075 4116 5.238650 GTGTTTAGCAAGCCAAAAGACTCTA 59.761 40.000 9.21 0.00 0.00 2.43
3076 4117 4.036852 GTGTTTAGCAAGCCAAAAGACTCT 59.963 41.667 9.21 0.00 0.00 3.24
3077 4118 4.290969 GTGTTTAGCAAGCCAAAAGACTC 58.709 43.478 9.21 0.00 0.00 3.36
3078 4119 3.068165 GGTGTTTAGCAAGCCAAAAGACT 59.932 43.478 13.57 0.00 29.82 3.24
3079 4120 3.381045 GGTGTTTAGCAAGCCAAAAGAC 58.619 45.455 8.39 8.39 0.00 3.01
3080 4121 2.364002 GGGTGTTTAGCAAGCCAAAAGA 59.636 45.455 0.00 0.00 34.02 2.52
3081 4122 2.102252 TGGGTGTTTAGCAAGCCAAAAG 59.898 45.455 0.00 0.00 40.85 2.27
3082 4123 2.111384 TGGGTGTTTAGCAAGCCAAAA 58.889 42.857 0.00 0.00 40.85 2.44
3083 4124 1.781786 TGGGTGTTTAGCAAGCCAAA 58.218 45.000 0.00 0.00 40.85 3.28
3084 4125 1.617850 CATGGGTGTTTAGCAAGCCAA 59.382 47.619 0.00 0.00 46.34 4.52
3085 4126 3.019040 AACATGGGTGTTTAGCAAGCCA 61.019 45.455 0.00 0.00 46.07 4.75
3086 4127 1.256812 ACATGGGTGTTTAGCAAGCC 58.743 50.000 0.00 0.00 34.01 4.35
3519 4560 3.061851 ATGATACACATGAGCAGTGGCG 61.062 50.000 0.00 0.00 40.67 5.69
3520 4561 2.028420 TGATACACATGAGCAGTGGC 57.972 50.000 0.00 0.00 41.21 5.01
3521 4562 4.069300 AGATGATACACATGAGCAGTGG 57.931 45.455 0.00 0.00 41.21 4.00
3522 4563 6.760298 AGTTTAGATGATACACATGAGCAGTG 59.240 38.462 0.00 0.00 39.56 3.66
3523 4564 6.882656 AGTTTAGATGATACACATGAGCAGT 58.117 36.000 0.00 0.00 39.56 4.40
3524 4565 7.783090 AAGTTTAGATGATACACATGAGCAG 57.217 36.000 0.00 0.00 39.56 4.24
3525 4566 8.478066 AGTAAGTTTAGATGATACACATGAGCA 58.522 33.333 0.00 0.00 39.56 4.26
3526 4567 8.879342 AGTAAGTTTAGATGATACACATGAGC 57.121 34.615 0.00 0.00 39.56 4.26
3650 4691 4.276678 TGAGTTCTGATTGAAGCAAGTTGG 59.723 41.667 4.75 0.00 35.01 3.77
3721 4762 5.353123 TGTTCAGAACACTACCAGTTGAAAC 59.647 40.000 12.24 0.00 36.25 2.78
3789 4830 6.834168 AACGAAATAAACCTTCATGTCCAT 57.166 33.333 0.00 0.00 0.00 3.41
3814 4855 9.274206 GGTTTAGAGAGAAATGTAGAAACAAGT 57.726 33.333 0.00 0.00 39.58 3.16
3862 4903 6.837048 TCAGCATTAGGACACAAGTATACCTA 59.163 38.462 0.00 0.00 32.90 3.08
4087 5167 1.209504 CCTGCTATCGAGGGGAACAAA 59.790 52.381 0.00 0.00 0.00 2.83
4234 5323 7.228108 TGTTACTCGTATAAGATACCACAGGAG 59.772 40.741 0.00 0.00 0.00 3.69
4437 5540 8.826765 AGGTCTAGAAGTTCAATTCCAGAATAA 58.173 33.333 5.50 0.00 30.40 1.40
4553 5662 9.635404 ACTGTATCTACTGTAGCTTCTTAGATT 57.365 33.333 9.98 5.69 36.74 2.40
4555 5664 9.767228 CTACTGTATCTACTGTAGCTTCTTAGA 57.233 37.037 16.50 0.00 45.26 2.10
4742 6056 6.331032 TGGTACTTCTATCATATGTCCCCAT 58.669 40.000 1.90 0.00 34.97 4.00
4744 6058 5.780793 ACTGGTACTTCTATCATATGTCCCC 59.219 44.000 1.90 0.00 0.00 4.81
4763 6081 2.016905 AACTCAGCTGAGGTACTGGT 57.983 50.000 39.42 20.43 46.13 4.00
4764 6082 3.330267 GAAAACTCAGCTGAGGTACTGG 58.670 50.000 39.42 19.80 42.17 4.00
4765 6083 3.007398 AGGAAAACTCAGCTGAGGTACTG 59.993 47.826 39.42 20.48 42.17 2.74
4766 6084 3.243724 AGGAAAACTCAGCTGAGGTACT 58.756 45.455 39.42 29.86 42.17 2.73
4767 6085 3.686916 AGGAAAACTCAGCTGAGGTAC 57.313 47.619 39.42 30.45 42.17 3.34
4768 6086 3.904339 AGAAGGAAAACTCAGCTGAGGTA 59.096 43.478 39.42 10.60 42.17 3.08
4849 6167 5.948588 TGTATTTGTTTTCCATGTGATCCG 58.051 37.500 0.00 0.00 0.00 4.18
5111 6450 2.735259 TATGAGGGGGAAGGGGTATC 57.265 55.000 0.00 0.00 0.00 2.24
5154 6504 2.455557 TCACCTGGGTATTGCAAATGG 58.544 47.619 1.71 2.35 0.00 3.16
5191 6541 5.579564 AGGTTTCGTAGAAGTCCAGTATC 57.420 43.478 8.09 0.00 45.90 2.24
5242 6592 0.457853 TCGGGCTGATCTTTTCGTCG 60.458 55.000 0.00 0.00 0.00 5.12
5260 6610 2.424601 TGCTGGCAGCTTGTTCATTATC 59.575 45.455 36.50 6.99 42.97 1.75
5331 6681 0.729116 CCGCTGGTCACTTGCAATAG 59.271 55.000 0.00 0.00 0.00 1.73
5344 6694 1.268896 GCATCACAATTGATCCGCTGG 60.269 52.381 13.59 0.00 40.79 4.85
5402 6756 2.860735 GACTACTACAAGCGCATCCAAG 59.139 50.000 11.47 2.42 0.00 3.61
5603 8382 4.827284 CCTTTGGTATTTCTGTTCAGTGGT 59.173 41.667 0.00 0.00 0.00 4.16
5604 8383 4.827284 ACCTTTGGTATTTCTGTTCAGTGG 59.173 41.667 0.00 0.00 32.11 4.00
5632 8411 2.936498 CGTTTGAGATAATGCGAGGGTT 59.064 45.455 0.00 0.00 0.00 4.11
5633 8412 2.550978 CGTTTGAGATAATGCGAGGGT 58.449 47.619 0.00 0.00 0.00 4.34
5634 8413 1.261619 GCGTTTGAGATAATGCGAGGG 59.738 52.381 0.00 0.00 31.10 4.30
5635 8414 1.933181 TGCGTTTGAGATAATGCGAGG 59.067 47.619 0.00 0.00 41.78 4.63
5636 8415 2.604914 ACTGCGTTTGAGATAATGCGAG 59.395 45.455 0.00 0.00 41.78 5.03
5637 8416 2.616960 ACTGCGTTTGAGATAATGCGA 58.383 42.857 0.00 0.00 41.78 5.10
5638 8417 3.389687 AACTGCGTTTGAGATAATGCG 57.610 42.857 0.00 0.00 41.78 4.73
5639 8418 5.216566 TGTAACTGCGTTTGAGATAATGC 57.783 39.130 0.00 0.00 39.83 3.56
5640 8419 6.019881 TCGATGTAACTGCGTTTGAGATAATG 60.020 38.462 0.00 0.00 0.00 1.90
5641 8420 6.019801 GTCGATGTAACTGCGTTTGAGATAAT 60.020 38.462 0.00 0.00 0.00 1.28
5642 8421 5.287752 GTCGATGTAACTGCGTTTGAGATAA 59.712 40.000 0.00 0.00 0.00 1.75
5643 8422 4.796830 GTCGATGTAACTGCGTTTGAGATA 59.203 41.667 0.00 0.00 0.00 1.98
5644 8423 3.612860 GTCGATGTAACTGCGTTTGAGAT 59.387 43.478 0.00 0.00 0.00 2.75
5645 8424 2.984471 GTCGATGTAACTGCGTTTGAGA 59.016 45.455 0.00 0.00 0.00 3.27
5650 8429 1.796459 GTTGGTCGATGTAACTGCGTT 59.204 47.619 0.00 0.02 0.00 4.84
5803 8585 2.954318 CTGAAATGGGGTTAGCCTGATG 59.046 50.000 0.00 0.00 34.45 3.07
5810 8592 2.806945 TCTGCCTGAAATGGGGTTAG 57.193 50.000 0.00 0.00 0.00 2.34
5833 8658 1.615883 CCTGATGACCGGACTGGATAG 59.384 57.143 9.46 0.00 42.00 2.08
5892 8717 3.065786 GCATTGTGTACCATCATCACCTG 59.934 47.826 0.00 0.00 0.00 4.00
5983 8808 7.634817 CGTTCGATGTGTTAAAATGAACCTATC 59.365 37.037 0.00 0.00 32.69 2.08
5985 8810 6.128499 CCGTTCGATGTGTTAAAATGAACCTA 60.128 38.462 0.00 0.00 32.69 3.08
6028 8853 3.063180 CGCCTTAATCTGTTGAGCTTCAG 59.937 47.826 7.79 7.79 0.00 3.02
6067 8892 3.470393 ACCTCCCGTTAAGGTGAGT 57.530 52.632 6.85 0.00 45.50 3.41
6182 9007 1.376424 CGGCCACATCTTCTGCACT 60.376 57.895 2.24 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.