Multiple sequence alignment - TraesCS5B01G270000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G270000 chr5B 100.000 7599 0 0 1 7599 455732295 455739893 0.000000e+00 14033.0
1 TraesCS5B01G270000 chr5B 97.143 105 3 0 2081 2185 455734273 455734377 2.180000e-40 178.0
2 TraesCS5B01G270000 chr5B 97.143 105 3 0 1979 2083 455734375 455734479 2.180000e-40 178.0
3 TraesCS5B01G270000 chr5B 94.253 87 5 0 7488 7574 330677929 330678015 4.780000e-27 134.0
4 TraesCS5B01G270000 chr5D 96.629 3115 45 5 2085 5199 379790233 379793287 0.000000e+00 5116.0
5 TraesCS5B01G270000 chr5D 92.881 2107 96 35 6 2083 379788252 379790333 0.000000e+00 3011.0
6 TraesCS5B01G270000 chr5D 94.612 1689 52 18 5306 6966 379793320 379794997 0.000000e+00 2579.0
7 TraesCS5B01G270000 chr5D 90.674 579 26 12 6922 7491 379794998 379795557 0.000000e+00 745.0
8 TraesCS5B01G270000 chr5D 87.681 138 15 1 1 136 379787981 379788118 7.890000e-35 159.0
9 TraesCS5B01G270000 chr5A 94.042 3105 139 7 2085 5188 480284730 480287789 0.000000e+00 4667.0
10 TraesCS5B01G270000 chr5A 92.757 1988 100 28 125 2083 480282858 480284830 0.000000e+00 2833.0
11 TraesCS5B01G270000 chr5A 93.460 1835 83 17 5479 7295 480288039 480289854 0.000000e+00 2689.0
12 TraesCS5B01G270000 chr5A 92.079 202 7 6 7295 7491 480291795 480291992 7.510000e-70 276.0
13 TraesCS5B01G270000 chr5A 94.118 136 8 0 1 136 480282095 480282230 2.780000e-49 207.0
14 TraesCS5B01G270000 chr5A 95.652 92 4 0 5336 5427 480287851 480287942 1.710000e-31 148.0
15 TraesCS5B01G270000 chr5A 78.626 131 27 1 5 134 480282709 480282839 1.360000e-12 86.1
16 TraesCS5B01G270000 chr5A 94.000 50 2 1 7196 7245 169798677 169798629 2.940000e-09 75.0
17 TraesCS5B01G270000 chr4A 76.333 769 133 31 4073 4805 438447731 438446976 4.330000e-97 366.0
18 TraesCS5B01G270000 chr4A 77.431 545 94 17 4277 4805 438446016 438445485 1.600000e-76 298.0
19 TraesCS5B01G270000 chr4A 95.690 116 1 3 5210 5323 69316923 69316810 4.680000e-42 183.0
20 TraesCS5B01G270000 chr4A 93.277 119 7 1 5206 5323 717237973 717237855 2.820000e-39 174.0
21 TraesCS5B01G270000 chr1A 75.619 767 140 29 4073 4805 408109063 408108310 3.400000e-88 337.0
22 TraesCS5B01G270000 chr1A 76.210 248 41 10 4569 4805 371269841 371270081 1.730000e-21 115.0
23 TraesCS5B01G270000 chr4D 75.962 728 125 31 4113 4805 124285566 124286278 5.680000e-86 329.0
24 TraesCS5B01G270000 chr4B 86.175 217 29 1 4855 5071 626066773 626066988 4.580000e-57 233.0
25 TraesCS5B01G270000 chr4B 99.065 107 1 0 5208 5314 186741668 186741774 7.780000e-45 193.0
26 TraesCS5B01G270000 chr4B 97.222 108 2 1 5200 5307 32922784 32922890 1.680000e-41 182.0
27 TraesCS5B01G270000 chr4B 93.023 86 6 0 7488 7573 1994884 1994969 8.000000e-25 126.0
28 TraesCS5B01G270000 chr4B 91.304 92 8 0 7482 7573 507357681 507357772 8.000000e-25 126.0
29 TraesCS5B01G270000 chr2A 97.297 111 1 1 5209 5317 92494524 92494414 3.620000e-43 187.0
30 TraesCS5B01G270000 chr2A 97.248 109 3 0 5207 5315 619208028 619208136 1.300000e-42 185.0
31 TraesCS5B01G270000 chr2A 80.198 101 9 8 4475 4570 556928409 556928315 1.770000e-06 65.8
32 TraesCS5B01G270000 chr1B 96.364 110 4 0 5206 5315 536657402 536657511 1.680000e-41 182.0
33 TraesCS5B01G270000 chr1B 95.575 113 4 1 5208 5320 328139785 328139674 6.060000e-41 180.0
34 TraesCS5B01G270000 chr2D 95.575 113 3 2 5206 5318 7661708 7661598 6.060000e-41 180.0
35 TraesCS5B01G270000 chr7B 91.753 97 6 2 7488 7583 48190819 48190914 4.780000e-27 134.0
36 TraesCS5B01G270000 chr6A 91.667 96 7 1 7479 7573 604198415 604198320 1.720000e-26 132.0
37 TraesCS5B01G270000 chr6A 90.625 96 9 0 7489 7584 535451532 535451627 2.230000e-25 128.0
38 TraesCS5B01G270000 chr3B 94.186 86 5 0 7489 7574 107158042 107157957 1.720000e-26 132.0
39 TraesCS5B01G270000 chr3B 92.391 92 6 1 7489 7579 173382265 173382174 6.190000e-26 130.0
40 TraesCS5B01G270000 chr1D 94.186 86 5 0 7488 7573 243753384 243753299 1.720000e-26 132.0
41 TraesCS5B01G270000 chr3D 86.076 79 10 1 4728 4805 513616724 513616802 4.890000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G270000 chr5B 455732295 455739893 7598 False 14033.000000 14033 100.000000 1 7599 1 chr5B.!!$F2 7598
1 TraesCS5B01G270000 chr5D 379787981 379795557 7576 False 2322.000000 5116 92.495400 1 7491 5 chr5D.!!$F1 7490
2 TraesCS5B01G270000 chr5A 480282095 480291992 9897 False 1558.014286 4667 91.533429 1 7491 7 chr5A.!!$F1 7490
3 TraesCS5B01G270000 chr4A 438445485 438447731 2246 True 332.000000 366 76.882000 4073 4805 2 chr4A.!!$R3 732
4 TraesCS5B01G270000 chr1A 408108310 408109063 753 True 337.000000 337 75.619000 4073 4805 1 chr1A.!!$R1 732
5 TraesCS5B01G270000 chr4D 124285566 124286278 712 False 329.000000 329 75.962000 4113 4805 1 chr4D.!!$F1 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
616 1302 1.007849 CAAAACCCAACCCGAAGCG 60.008 57.895 0.00 0.0 0.00 4.68 F
2089 2806 0.250467 TGCCAAGGACACTTCTCAGC 60.250 55.000 0.00 0.0 33.81 4.26 F
2231 2948 0.037790 GAGAGCGAAGTTGCCTCTGT 60.038 55.000 6.61 0.0 32.69 3.41 F
2598 3315 0.095245 CAGATAGCGTGCAAACACCG 59.905 55.000 0.00 0.0 44.40 4.94 F
3298 4045 0.321564 CCAGCCGGACATTCTTGACA 60.322 55.000 5.05 0.0 0.00 3.58 F
4046 4797 0.793250 GCAGCACGGAAAGAAGAGAC 59.207 55.000 0.00 0.0 0.00 3.36 F
5305 7612 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2107 2824 0.095417 GAAGTCGCTTCACAATCGCC 59.905 55.000 12.72 0.0 39.95 5.54 R
3032 3779 0.518636 CACAGCAGTTCCATGTTCCG 59.481 55.000 0.00 0.0 0.00 4.30 R
4046 4797 0.740164 ATGTGCAGCTCTCGCTTCAG 60.740 55.000 0.00 0.0 46.47 3.02 R
4164 6414 5.527582 GGTAATAAGGTCAATACACCAGCAG 59.472 44.000 0.00 0.0 39.16 4.24 R
5291 7598 1.288633 TGTATTACTCCCTCCGTCCCA 59.711 52.381 0.00 0.0 0.00 4.37 R
5956 8319 1.407437 CGCCTTCCTTGCTAACTCCAT 60.407 52.381 0.00 0.0 0.00 3.41 R
7225 9648 0.106015 CACAATCCCCTCCAATCCCC 60.106 60.000 0.00 0.0 0.00 4.81 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.280421 AGCCGAAAGAGGAAATGAGCT 59.720 47.619 0.00 0.00 0.00 4.09
58 59 2.029307 AATAGGAGAAGCGCGGGACC 62.029 60.000 8.83 5.12 0.00 4.46
185 831 4.654262 TCCTCCGAGCATAACCTAAAAGAT 59.346 41.667 0.00 0.00 0.00 2.40
264 914 5.048083 CCCTACTGTGCAACACAATTACAAT 60.048 40.000 1.64 0.00 45.67 2.71
283 933 5.741011 ACAATTAGGCTCCTCGAAATACAA 58.259 37.500 0.00 0.00 0.00 2.41
290 940 4.000988 GCTCCTCGAAATACAACCTCAAA 58.999 43.478 0.00 0.00 0.00 2.69
296 946 7.023575 CCTCGAAATACAACCTCAAAGATTTG 58.976 38.462 0.00 0.00 39.48 2.32
313 963 6.461110 AGATTTGACATTTATGCAAGGAGG 57.539 37.500 0.00 0.00 0.00 4.30
379 1029 2.888863 GAGAGGAGGCCGTGTGAG 59.111 66.667 0.00 0.00 0.00 3.51
507 1177 3.351885 ACGCCTCCTCCTCCCTCT 61.352 66.667 0.00 0.00 0.00 3.69
508 1178 2.520741 CGCCTCCTCCTCCCTCTC 60.521 72.222 0.00 0.00 0.00 3.20
509 1179 3.024217 GCCTCCTCCTCCCTCTCT 58.976 66.667 0.00 0.00 0.00 3.10
510 1180 1.152546 GCCTCCTCCTCCCTCTCTC 60.153 68.421 0.00 0.00 0.00 3.20
511 1181 1.541672 CCTCCTCCTCCCTCTCTCC 59.458 68.421 0.00 0.00 0.00 3.71
610 1296 2.840572 ACCGCCAAAACCCAACCC 60.841 61.111 0.00 0.00 0.00 4.11
611 1297 3.984749 CCGCCAAAACCCAACCCG 61.985 66.667 0.00 0.00 0.00 5.28
612 1298 2.907917 CGCCAAAACCCAACCCGA 60.908 61.111 0.00 0.00 0.00 5.14
613 1299 2.491022 CGCCAAAACCCAACCCGAA 61.491 57.895 0.00 0.00 0.00 4.30
614 1300 1.365999 GCCAAAACCCAACCCGAAG 59.634 57.895 0.00 0.00 0.00 3.79
615 1301 1.365999 CCAAAACCCAACCCGAAGC 59.634 57.895 0.00 0.00 0.00 3.86
616 1302 1.007849 CAAAACCCAACCCGAAGCG 60.008 57.895 0.00 0.00 0.00 4.68
617 1303 2.852180 AAAACCCAACCCGAAGCGC 61.852 57.895 0.00 0.00 0.00 5.92
618 1304 4.572571 AACCCAACCCGAAGCGCA 62.573 61.111 11.47 0.00 0.00 6.09
722 1429 2.799371 GATCTCGCTCGTCCCGTT 59.201 61.111 0.00 0.00 0.00 4.44
810 1523 2.137177 TTGTAAGTGCCTCCCCTGCC 62.137 60.000 0.00 0.00 0.00 4.85
864 1579 4.720902 TGTGCGTGATGGGGCCTG 62.721 66.667 0.84 0.00 0.00 4.85
883 1599 4.379143 GTTTCGTGCCGGGTTCGC 62.379 66.667 2.18 0.00 34.56 4.70
953 1670 2.440613 ACGGGGCGGTGTTGTTTT 60.441 55.556 0.00 0.00 0.00 2.43
1255 1972 4.514577 CTGACGCGGGCGGAGATT 62.515 66.667 18.03 0.00 44.69 2.40
1359 2076 0.898320 CGGAGTCTGAGGTTGATGGT 59.102 55.000 0.00 0.00 0.00 3.55
1508 2225 1.279846 TGCTGATGATTCTGCTCCACA 59.720 47.619 6.44 0.00 44.58 4.17
1536 2253 5.393962 GTGGAATCTGTGCTTAATGTCAAC 58.606 41.667 0.00 0.00 0.00 3.18
1638 2355 4.753233 CAGAGTCCAGTGGTTCAGATAAG 58.247 47.826 9.54 0.00 0.00 1.73
1735 2452 1.201424 TGCTGCTGAGATCATGGAGT 58.799 50.000 0.00 0.00 0.00 3.85
1756 2473 3.033909 TCAGGTACAGATGGATCAGGTG 58.966 50.000 0.00 0.00 0.00 4.00
1772 2489 2.603473 TGTCTCGGGGGTGACTGG 60.603 66.667 0.00 0.00 34.57 4.00
1819 2536 4.956075 TGACTGCTACTGATCCTGTGATTA 59.044 41.667 0.00 0.00 0.00 1.75
1980 2697 2.746362 GCAGCAAATAGAAGCACTGACT 59.254 45.455 0.00 0.00 0.00 3.41
2046 2763 2.723530 AGGGACCTTCAGAAGAGGAA 57.276 50.000 12.14 0.00 0.00 3.36
2047 2764 2.545810 AGGGACCTTCAGAAGAGGAAG 58.454 52.381 12.14 0.00 41.08 3.46
2048 2765 2.158081 AGGGACCTTCAGAAGAGGAAGT 60.158 50.000 12.14 0.10 40.06 3.01
2049 2766 2.640332 GGGACCTTCAGAAGAGGAAGTT 59.360 50.000 12.14 0.00 40.06 2.66
2050 2767 3.558109 GGGACCTTCAGAAGAGGAAGTTG 60.558 52.174 12.14 0.00 40.06 3.16
2051 2768 3.071747 GGACCTTCAGAAGAGGAAGTTGT 59.928 47.826 12.14 0.00 40.06 3.32
2052 2769 4.445019 GGACCTTCAGAAGAGGAAGTTGTT 60.445 45.833 12.14 0.00 40.06 2.83
2053 2770 4.455606 ACCTTCAGAAGAGGAAGTTGTTG 58.544 43.478 12.14 0.00 40.06 3.33
2054 2771 3.251972 CCTTCAGAAGAGGAAGTTGTTGC 59.748 47.826 12.14 0.00 40.06 4.17
2055 2772 3.558931 TCAGAAGAGGAAGTTGTTGCA 57.441 42.857 0.00 0.00 0.00 4.08
2056 2773 3.884895 TCAGAAGAGGAAGTTGTTGCAA 58.115 40.909 0.00 0.00 0.00 4.08
2057 2774 4.269183 TCAGAAGAGGAAGTTGTTGCAAA 58.731 39.130 0.00 0.00 0.00 3.68
2058 2775 7.167128 CTTCAGAAGAGGAAGTTGTTGCAAAC 61.167 42.308 3.82 0.00 41.01 2.93
2067 2784 4.662961 GTTGCAAACGGGCCTGGC 62.663 66.667 18.00 11.05 36.92 4.85
2068 2785 4.912395 TTGCAAACGGGCCTGGCT 62.912 61.111 19.68 0.00 0.00 4.75
2071 2788 3.673484 CAAACGGGCCTGGCTGTG 61.673 66.667 19.68 10.95 0.00 3.66
2083 2800 4.164258 GCTGTGCCAAGGACACTT 57.836 55.556 12.54 0.00 38.86 3.16
2084 2801 1.952263 GCTGTGCCAAGGACACTTC 59.048 57.895 12.54 3.96 38.86 3.01
2085 2802 0.536006 GCTGTGCCAAGGACACTTCT 60.536 55.000 12.54 0.00 38.86 2.85
2086 2803 1.517242 CTGTGCCAAGGACACTTCTC 58.483 55.000 12.54 0.00 38.86 2.87
2087 2804 0.836606 TGTGCCAAGGACACTTCTCA 59.163 50.000 12.54 0.00 38.86 3.27
2088 2805 1.202687 TGTGCCAAGGACACTTCTCAG 60.203 52.381 12.54 0.00 38.86 3.35
2089 2806 0.250467 TGCCAAGGACACTTCTCAGC 60.250 55.000 0.00 0.00 33.81 4.26
2090 2807 0.957888 GCCAAGGACACTTCTCAGCC 60.958 60.000 0.00 0.00 33.81 4.85
2091 2808 0.689623 CCAAGGACACTTCTCAGCCT 59.310 55.000 0.00 0.00 33.81 4.58
2092 2809 1.610102 CCAAGGACACTTCTCAGCCTG 60.610 57.143 0.00 0.00 33.81 4.85
2093 2810 1.345741 CAAGGACACTTCTCAGCCTGA 59.654 52.381 0.00 0.00 33.81 3.86
2094 2811 1.722034 AGGACACTTCTCAGCCTGAA 58.278 50.000 0.00 0.00 0.00 3.02
2095 2812 1.622811 AGGACACTTCTCAGCCTGAAG 59.377 52.381 0.00 8.73 44.52 3.02
2102 2819 4.478206 CTTCTCAGCCTGAAGTATTGGA 57.522 45.455 0.00 0.00 36.94 3.53
2103 2820 5.033589 CTTCTCAGCCTGAAGTATTGGAT 57.966 43.478 0.00 0.00 36.94 3.41
2104 2821 4.412796 TCTCAGCCTGAAGTATTGGATG 57.587 45.455 0.00 0.00 38.47 3.51
2105 2822 3.135348 TCTCAGCCTGAAGTATTGGATGG 59.865 47.826 0.00 0.00 37.78 3.51
2106 2823 3.114606 TCAGCCTGAAGTATTGGATGGA 58.885 45.455 0.00 0.00 37.78 3.41
2107 2824 3.135348 TCAGCCTGAAGTATTGGATGGAG 59.865 47.826 0.00 0.00 37.78 3.86
2108 2825 2.441001 AGCCTGAAGTATTGGATGGAGG 59.559 50.000 0.00 0.00 0.00 4.30
2109 2826 2.856222 CCTGAAGTATTGGATGGAGGC 58.144 52.381 0.00 0.00 0.00 4.70
2110 2827 2.487934 CTGAAGTATTGGATGGAGGCG 58.512 52.381 0.00 0.00 0.00 5.52
2111 2828 2.103094 CTGAAGTATTGGATGGAGGCGA 59.897 50.000 0.00 0.00 0.00 5.54
2112 2829 2.705658 TGAAGTATTGGATGGAGGCGAT 59.294 45.455 0.00 0.00 0.00 4.58
2113 2830 3.136443 TGAAGTATTGGATGGAGGCGATT 59.864 43.478 0.00 0.00 0.00 3.34
2114 2831 3.131709 AGTATTGGATGGAGGCGATTG 57.868 47.619 0.00 0.00 0.00 2.67
2115 2832 2.439507 AGTATTGGATGGAGGCGATTGT 59.560 45.455 0.00 0.00 0.00 2.71
2116 2833 1.683943 ATTGGATGGAGGCGATTGTG 58.316 50.000 0.00 0.00 0.00 3.33
2117 2834 0.617935 TTGGATGGAGGCGATTGTGA 59.382 50.000 0.00 0.00 0.00 3.58
2118 2835 0.617935 TGGATGGAGGCGATTGTGAA 59.382 50.000 0.00 0.00 0.00 3.18
2119 2836 1.303309 GGATGGAGGCGATTGTGAAG 58.697 55.000 0.00 0.00 0.00 3.02
2120 2837 0.659957 GATGGAGGCGATTGTGAAGC 59.340 55.000 0.00 0.00 0.00 3.86
2121 2838 1.091771 ATGGAGGCGATTGTGAAGCG 61.092 55.000 0.00 0.00 44.28 4.68
2122 2839 1.447838 GGAGGCGATTGTGAAGCGA 60.448 57.895 0.00 0.00 44.20 4.93
2124 2841 3.876300 GGCGATTGTGAAGCGACT 58.124 55.556 0.00 0.00 46.56 4.18
2125 2842 2.162716 GGCGATTGTGAAGCGACTT 58.837 52.632 0.00 0.00 46.56 3.01
2126 2843 0.095417 GGCGATTGTGAAGCGACTTC 59.905 55.000 11.24 11.24 46.56 3.01
2127 2844 1.071605 GCGATTGTGAAGCGACTTCT 58.928 50.000 16.76 1.52 44.20 2.85
2128 2845 2.259618 GCGATTGTGAAGCGACTTCTA 58.740 47.619 16.76 6.94 44.20 2.10
2129 2846 2.666508 GCGATTGTGAAGCGACTTCTAA 59.333 45.455 16.76 13.03 44.20 2.10
2130 2847 3.241804 GCGATTGTGAAGCGACTTCTAAG 60.242 47.826 16.76 0.00 44.20 2.18
2131 2848 3.304559 CGATTGTGAAGCGACTTCTAAGG 59.695 47.826 16.76 7.95 44.20 2.69
2132 2849 2.743636 TGTGAAGCGACTTCTAAGGG 57.256 50.000 16.76 0.00 40.73 3.95
2133 2850 2.244695 TGTGAAGCGACTTCTAAGGGA 58.755 47.619 16.76 0.00 40.73 4.20
2134 2851 2.029290 TGTGAAGCGACTTCTAAGGGAC 60.029 50.000 16.76 8.79 40.73 4.46
2135 2852 1.549170 TGAAGCGACTTCTAAGGGACC 59.451 52.381 16.76 0.00 40.73 4.46
2136 2853 1.826096 GAAGCGACTTCTAAGGGACCT 59.174 52.381 10.97 0.00 37.49 3.85
2137 2854 1.939980 AGCGACTTCTAAGGGACCTT 58.060 50.000 8.86 8.86 39.83 3.50
2138 2855 1.826096 AGCGACTTCTAAGGGACCTTC 59.174 52.381 6.92 0.00 37.47 3.46
2139 2856 1.549170 GCGACTTCTAAGGGACCTTCA 59.451 52.381 6.92 0.00 37.47 3.02
2140 2857 2.417515 GCGACTTCTAAGGGACCTTCAG 60.418 54.545 6.92 5.27 37.47 3.02
2141 2858 3.090037 CGACTTCTAAGGGACCTTCAGA 58.910 50.000 6.92 6.54 37.47 3.27
2142 2859 3.510360 CGACTTCTAAGGGACCTTCAGAA 59.490 47.826 6.92 12.82 37.47 3.02
2143 2860 4.381079 CGACTTCTAAGGGACCTTCAGAAG 60.381 50.000 26.96 26.96 44.96 2.85
2144 2861 4.753186 ACTTCTAAGGGACCTTCAGAAGA 58.247 43.478 30.70 19.21 43.09 2.87
2145 2862 4.775253 ACTTCTAAGGGACCTTCAGAAGAG 59.225 45.833 30.70 19.73 43.09 2.85
2146 2863 3.714144 TCTAAGGGACCTTCAGAAGAGG 58.286 50.000 12.14 0.00 37.47 3.69
2147 2864 2.723530 AAGGGACCTTCAGAAGAGGA 57.276 50.000 12.14 0.00 0.00 3.71
2231 2948 0.037790 GAGAGCGAAGTTGCCTCTGT 60.038 55.000 6.61 0.00 32.69 3.41
2249 2966 1.318576 GTTGTGGTTGAAGTGGAGGG 58.681 55.000 0.00 0.00 0.00 4.30
2258 2975 1.272313 TGAAGTGGAGGGCGTAGTAGT 60.272 52.381 0.00 0.00 0.00 2.73
2426 3143 6.038271 GTGCAAGATAATGAATCCGTTAAGGT 59.962 38.462 0.00 0.00 41.99 3.50
2555 3272 3.144506 CTGCAGTTTCTGATGTGAAGGT 58.855 45.455 5.25 0.00 32.44 3.50
2575 3292 3.980775 GGTTGTCATGTTGGAAATGAACG 59.019 43.478 0.00 0.00 35.87 3.95
2598 3315 0.095245 CAGATAGCGTGCAAACACCG 59.905 55.000 0.00 0.00 44.40 4.94
2718 3465 2.423185 CGCACATTTAGCCCAGAATGAA 59.577 45.455 3.36 0.00 39.69 2.57
2719 3466 3.067180 CGCACATTTAGCCCAGAATGAAT 59.933 43.478 3.36 0.00 39.69 2.57
2720 3467 4.275689 CGCACATTTAGCCCAGAATGAATA 59.724 41.667 3.36 0.00 39.69 1.75
2721 3468 5.048504 CGCACATTTAGCCCAGAATGAATAT 60.049 40.000 3.36 0.00 39.69 1.28
2722 3469 6.515531 CGCACATTTAGCCCAGAATGAATATT 60.516 38.462 3.36 0.00 39.69 1.28
2723 3470 6.865205 GCACATTTAGCCCAGAATGAATATTC 59.135 38.462 8.60 8.60 42.44 1.75
2738 3485 8.954950 AATGAATATTCTTCTGTACAGACTGG 57.045 34.615 25.13 17.01 37.14 4.00
2739 3486 7.718334 TGAATATTCTTCTGTACAGACTGGA 57.282 36.000 25.13 18.83 37.14 3.86
2740 3487 8.134202 TGAATATTCTTCTGTACAGACTGGAA 57.866 34.615 25.13 24.75 37.14 3.53
2741 3488 8.593679 TGAATATTCTTCTGTACAGACTGGAAA 58.406 33.333 25.13 14.27 37.14 3.13
2742 3489 9.436957 GAATATTCTTCTGTACAGACTGGAAAA 57.563 33.333 25.13 12.69 37.14 2.29
2743 3490 8.779354 ATATTCTTCTGTACAGACTGGAAAAC 57.221 34.615 25.13 0.39 37.14 2.43
2744 3491 5.607939 TCTTCTGTACAGACTGGAAAACA 57.392 39.130 25.13 6.51 37.14 2.83
2745 3492 6.174720 TCTTCTGTACAGACTGGAAAACAT 57.825 37.500 25.13 0.00 37.14 2.71
2746 3493 5.991606 TCTTCTGTACAGACTGGAAAACATG 59.008 40.000 25.13 3.15 37.14 3.21
2747 3494 5.545063 TCTGTACAGACTGGAAAACATGA 57.455 39.130 21.74 0.00 31.41 3.07
3032 3779 7.254455 CGATGAAGTTATATCTGGTGTTTCCAC 60.254 40.741 0.00 0.00 41.93 4.02
3204 3951 3.276857 CCCAGGAAGTGAATCTGATGTG 58.723 50.000 0.00 0.00 0.00 3.21
3208 3955 2.941720 GGAAGTGAATCTGATGTGGCTC 59.058 50.000 0.00 0.00 0.00 4.70
3209 3956 2.706339 AGTGAATCTGATGTGGCTCC 57.294 50.000 0.00 0.00 0.00 4.70
3298 4045 0.321564 CCAGCCGGACATTCTTGACA 60.322 55.000 5.05 0.00 0.00 3.58
3399 4146 0.824109 CTCCTCATACGGACAAGGCA 59.176 55.000 0.00 0.00 0.00 4.75
3570 4318 8.417106 TCTCCTTGAAGTTAGTGCTGAATATAG 58.583 37.037 0.00 0.00 0.00 1.31
3571 4319 8.079211 TCCTTGAAGTTAGTGCTGAATATAGT 57.921 34.615 0.00 0.00 0.00 2.12
3572 4320 8.540388 TCCTTGAAGTTAGTGCTGAATATAGTT 58.460 33.333 0.00 0.00 0.00 2.24
3580 4331 6.500684 AGTGCTGAATATAGTTGTTTGTGG 57.499 37.500 0.00 0.00 0.00 4.17
3679 4430 7.012989 GGAACATGAGAATGATGATGAACATGA 59.987 37.037 0.00 0.00 39.56 3.07
3770 4521 7.252612 TGAGAGTGACAAGGGAAATATACAA 57.747 36.000 0.00 0.00 0.00 2.41
4046 4797 0.793250 GCAGCACGGAAAGAAGAGAC 59.207 55.000 0.00 0.00 0.00 3.36
4164 6414 9.780413 GAAATTGATGAGTTGGTAAGAATTCTC 57.220 33.333 8.78 0.00 0.00 2.87
4463 6734 4.134563 TCTTAAGCCACACCTTGTTCTTC 58.865 43.478 0.00 0.00 0.00 2.87
4675 6950 2.093973 ACGTCAACAGGCCTATGAGAAG 60.094 50.000 18.23 14.85 0.00 2.85
4839 7124 8.754991 ACTACTGTGCTAGTGACTAATATTCT 57.245 34.615 0.00 0.00 40.65 2.40
4840 7125 9.848710 ACTACTGTGCTAGTGACTAATATTCTA 57.151 33.333 0.00 0.00 40.65 2.10
4963 7248 2.125512 GAAGGACCGCGATGCTGT 60.126 61.111 8.23 0.00 0.00 4.40
5051 7336 3.264450 AGACAACCCCCTCTCTGTTATTG 59.736 47.826 0.00 0.00 0.00 1.90
5212 7519 9.459640 TTTAATCTCGTGTCAGTGCTATAATAC 57.540 33.333 0.00 0.00 0.00 1.89
5213 7520 6.885952 ATCTCGTGTCAGTGCTATAATACT 57.114 37.500 0.00 0.00 0.00 2.12
5214 7521 6.301687 TCTCGTGTCAGTGCTATAATACTC 57.698 41.667 0.00 0.00 0.00 2.59
5215 7522 5.238868 TCTCGTGTCAGTGCTATAATACTCC 59.761 44.000 0.00 0.00 0.00 3.85
5216 7523 4.277672 TCGTGTCAGTGCTATAATACTCCC 59.722 45.833 0.00 0.00 0.00 4.30
5217 7524 4.278669 CGTGTCAGTGCTATAATACTCCCT 59.721 45.833 0.00 0.00 0.00 4.20
5218 7525 5.563085 CGTGTCAGTGCTATAATACTCCCTC 60.563 48.000 0.00 0.00 0.00 4.30
5219 7526 4.833380 TGTCAGTGCTATAATACTCCCTCC 59.167 45.833 0.00 0.00 0.00 4.30
5220 7527 4.079970 TCAGTGCTATAATACTCCCTCCG 58.920 47.826 0.00 0.00 0.00 4.63
5221 7528 3.827302 CAGTGCTATAATACTCCCTCCGT 59.173 47.826 0.00 0.00 0.00 4.69
5222 7529 4.080687 AGTGCTATAATACTCCCTCCGTC 58.919 47.826 0.00 0.00 0.00 4.79
5223 7530 4.080687 GTGCTATAATACTCCCTCCGTCT 58.919 47.826 0.00 0.00 0.00 4.18
5224 7531 4.156373 GTGCTATAATACTCCCTCCGTCTC 59.844 50.000 0.00 0.00 0.00 3.36
5225 7532 4.202535 TGCTATAATACTCCCTCCGTCTCA 60.203 45.833 0.00 0.00 0.00 3.27
5226 7533 4.765856 GCTATAATACTCCCTCCGTCTCAA 59.234 45.833 0.00 0.00 0.00 3.02
5227 7534 5.243283 GCTATAATACTCCCTCCGTCTCAAA 59.757 44.000 0.00 0.00 0.00 2.69
5228 7535 6.239232 GCTATAATACTCCCTCCGTCTCAAAA 60.239 42.308 0.00 0.00 0.00 2.44
5229 7536 6.749036 ATAATACTCCCTCCGTCTCAAAAT 57.251 37.500 0.00 0.00 0.00 1.82
5230 7537 7.850935 ATAATACTCCCTCCGTCTCAAAATA 57.149 36.000 0.00 0.00 0.00 1.40
5231 7538 6.555463 AATACTCCCTCCGTCTCAAAATAA 57.445 37.500 0.00 0.00 0.00 1.40
5232 7539 4.473477 ACTCCCTCCGTCTCAAAATAAG 57.527 45.455 0.00 0.00 0.00 1.73
5233 7540 3.838903 ACTCCCTCCGTCTCAAAATAAGT 59.161 43.478 0.00 0.00 0.00 2.24
5234 7541 4.184629 CTCCCTCCGTCTCAAAATAAGTG 58.815 47.826 0.00 0.00 0.00 3.16
5235 7542 3.581332 TCCCTCCGTCTCAAAATAAGTGT 59.419 43.478 0.00 0.00 0.00 3.55
5236 7543 3.933332 CCCTCCGTCTCAAAATAAGTGTC 59.067 47.826 0.00 0.00 0.00 3.67
5237 7544 4.322801 CCCTCCGTCTCAAAATAAGTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
5238 7545 5.238583 CCTCCGTCTCAAAATAAGTGTCTT 58.761 41.667 0.00 0.00 0.00 3.01
5239 7546 5.120830 CCTCCGTCTCAAAATAAGTGTCTTG 59.879 44.000 0.00 0.00 0.00 3.02
5240 7547 5.849510 TCCGTCTCAAAATAAGTGTCTTGA 58.150 37.500 0.00 0.00 0.00 3.02
5241 7548 5.926542 TCCGTCTCAAAATAAGTGTCTTGAG 59.073 40.000 4.63 4.63 43.97 3.02
5242 7549 5.389935 CCGTCTCAAAATAAGTGTCTTGAGC 60.390 44.000 5.91 1.95 42.87 4.26
5243 7550 5.406780 CGTCTCAAAATAAGTGTCTTGAGCT 59.593 40.000 5.91 0.00 42.87 4.09
5244 7551 6.073548 CGTCTCAAAATAAGTGTCTTGAGCTT 60.074 38.462 5.91 0.00 42.87 3.74
5245 7552 7.116376 CGTCTCAAAATAAGTGTCTTGAGCTTA 59.884 37.037 5.91 0.00 42.87 3.09
5246 7553 8.439286 GTCTCAAAATAAGTGTCTTGAGCTTAG 58.561 37.037 5.91 0.00 42.87 2.18
5247 7554 8.150945 TCTCAAAATAAGTGTCTTGAGCTTAGT 58.849 33.333 5.91 0.00 42.87 2.24
5248 7555 9.424319 CTCAAAATAAGTGTCTTGAGCTTAGTA 57.576 33.333 0.00 0.00 38.63 1.82
5249 7556 9.204570 TCAAAATAAGTGTCTTGAGCTTAGTAC 57.795 33.333 0.00 0.00 0.00 2.73
5250 7557 8.988934 CAAAATAAGTGTCTTGAGCTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
5251 7558 9.555727 AAAATAAGTGTCTTGAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
5252 7559 9.555727 AAATAAGTGTCTTGAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
5253 7560 9.726438 AATAAGTGTCTTGAGCTTAGTACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
5254 7561 9.726438 ATAAGTGTCTTGAGCTTAGTACAAATT 57.274 29.630 0.00 0.00 0.00 1.82
5255 7562 8.451908 AAGTGTCTTGAGCTTAGTACAAATTT 57.548 30.769 0.00 0.00 0.00 1.82
5256 7563 7.865707 AGTGTCTTGAGCTTAGTACAAATTTG 58.134 34.615 16.67 16.67 0.00 2.32
5257 7564 7.499232 AGTGTCTTGAGCTTAGTACAAATTTGT 59.501 33.333 25.99 25.99 44.86 2.83
5258 7565 8.770828 GTGTCTTGAGCTTAGTACAAATTTGTA 58.229 33.333 23.91 23.91 42.35 2.41
5282 7589 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
5283 7590 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
5284 7591 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
5285 7592 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
5286 7593 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
5287 7594 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
5288 7595 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
5289 7596 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
5290 7597 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
5293 7600 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
5294 7601 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
5295 7602 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
5296 7603 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
5297 7604 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
5298 7605 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
5299 7606 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
5300 7607 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
5301 7608 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
5302 7609 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
5303 7610 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
5304 7611 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
5305 7612 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
5306 7613 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
5423 7730 4.271807 AGTCCCTCCTATGACTGATCAA 57.728 45.455 0.00 0.00 40.23 2.57
5427 7734 5.777732 GTCCCTCCTATGACTGATCAATACT 59.222 44.000 0.00 0.00 38.69 2.12
5428 7735 5.777223 TCCCTCCTATGACTGATCAATACTG 59.223 44.000 0.00 0.00 38.69 2.74
5612 7969 4.927978 TTAGCACTCTGAGGAGATTAGC 57.072 45.455 9.85 1.80 41.86 3.09
6004 8367 1.078143 GCACGCAAGGAGGAGGAAT 60.078 57.895 0.00 0.00 46.39 3.01
6011 8374 3.133003 CGCAAGGAGGAGGAATTAAGAGA 59.867 47.826 0.00 0.00 0.00 3.10
6038 8401 0.670162 GCTGCAGCTGAAAAGGAACA 59.330 50.000 31.33 1.68 38.21 3.18
6218 8583 7.398024 AGCCTCATTTCTTCTTGTTACACTAT 58.602 34.615 0.00 0.00 0.00 2.12
6301 8666 3.889538 AGAAGTCTAAAAAGGTTGGCACC 59.110 43.478 0.00 0.00 44.67 5.01
6324 8689 1.417890 ACCAGCAGACTTAGCAAGTGT 59.582 47.619 6.31 0.51 43.03 3.55
6335 8700 0.536006 AGCAAGTGTCCAGAGCAACC 60.536 55.000 0.00 0.00 0.00 3.77
6353 8718 2.759355 ACCCTGCACCTATAGCTACAA 58.241 47.619 0.00 0.00 0.00 2.41
6359 8724 3.181490 TGCACCTATAGCTACAACAGACG 60.181 47.826 0.00 0.00 0.00 4.18
6379 8744 2.763249 CTGAAAGCAACACACCTGAC 57.237 50.000 0.00 0.00 0.00 3.51
6415 8780 0.856982 ATGTTCCTCAACAACCCCCA 59.143 50.000 0.00 0.00 45.78 4.96
6417 8782 1.328279 GTTCCTCAACAACCCCCAAG 58.672 55.000 0.00 0.00 32.14 3.61
6418 8783 0.187361 TTCCTCAACAACCCCCAAGG 59.813 55.000 0.00 0.00 43.78 3.61
6420 8785 0.251341 CCTCAACAACCCCCAAGGAG 60.251 60.000 0.00 0.00 39.89 3.69
6421 8786 0.251341 CTCAACAACCCCCAAGGAGG 60.251 60.000 0.00 0.00 39.89 4.30
6422 8787 1.908299 CAACAACCCCCAAGGAGGC 60.908 63.158 0.00 0.00 39.89 4.70
6423 8788 3.160478 AACAACCCCCAAGGAGGCC 62.160 63.158 0.00 0.00 39.89 5.19
6424 8789 4.382541 CAACCCCCAAGGAGGCCC 62.383 72.222 0.00 0.00 39.89 5.80
6429 8794 3.012722 CCCAAGGAGGCCCGGTAA 61.013 66.667 0.00 0.00 37.58 2.85
6430 8795 2.608550 CCCAAGGAGGCCCGGTAAA 61.609 63.158 0.00 0.00 37.58 2.01
6431 8796 1.378119 CCAAGGAGGCCCGGTAAAC 60.378 63.158 0.00 0.00 37.58 2.01
6432 8797 1.378119 CAAGGAGGCCCGGTAAACC 60.378 63.158 0.00 0.00 37.58 3.27
6433 8798 1.848895 AAGGAGGCCCGGTAAACCA 60.849 57.895 0.00 0.00 37.58 3.67
6434 8799 1.848886 AAGGAGGCCCGGTAAACCAG 61.849 60.000 0.00 0.00 37.58 4.00
6436 8801 3.253838 AGGCCCGGTAAACCAGCA 61.254 61.111 0.00 0.00 36.84 4.41
6636 9010 1.224069 CTATGGATGGCGAGGCGTTG 61.224 60.000 0.00 0.00 0.00 4.10
6931 9306 5.630539 GCCTGGTGGTTATGGTTATCTGTTA 60.631 44.000 0.00 0.00 35.27 2.41
6932 9307 5.820947 CCTGGTGGTTATGGTTATCTGTTAC 59.179 44.000 0.00 0.00 0.00 2.50
6933 9308 6.352737 CCTGGTGGTTATGGTTATCTGTTACT 60.353 42.308 0.00 0.00 0.00 2.24
6934 9309 6.411376 TGGTGGTTATGGTTATCTGTTACTG 58.589 40.000 0.00 0.00 0.00 2.74
6935 9310 6.013206 TGGTGGTTATGGTTATCTGTTACTGT 60.013 38.462 0.00 0.00 0.00 3.55
6936 9311 7.180587 TGGTGGTTATGGTTATCTGTTACTGTA 59.819 37.037 0.00 0.00 0.00 2.74
6995 9418 5.883115 TCAGTTGGTGTTCACTCACATTTTA 59.117 36.000 2.98 0.00 39.76 1.52
7012 9435 5.948162 ACATTTTACTGGAATCACATGCTCT 59.052 36.000 0.00 0.00 0.00 4.09
7017 9440 2.426024 CTGGAATCACATGCTCTTTGGG 59.574 50.000 0.00 0.00 0.00 4.12
7074 9497 4.763793 GGTGAGTTTCCCTTACCCTTTTAC 59.236 45.833 0.00 0.00 42.63 2.01
7210 9633 1.112916 CCCAAGGCCTTGTTCGGTTT 61.113 55.000 37.09 3.07 38.85 3.27
7224 9647 1.781153 CGGTTTACACCCCCTCCCAA 61.781 60.000 0.00 0.00 40.52 4.12
7225 9648 0.039180 GGTTTACACCCCCTCCCAAG 59.961 60.000 0.00 0.00 37.03 3.61
7226 9649 0.039180 GTTTACACCCCCTCCCAAGG 59.961 60.000 0.00 0.00 42.95 3.61
7260 9683 4.409247 GGATTGTGGTAGACTTATCCCTGT 59.591 45.833 0.00 0.00 33.60 4.00
7327 11691 7.856145 ATTTAGCATCTACTCAAACCTCTTG 57.144 36.000 0.00 0.00 0.00 3.02
7328 11692 4.213564 AGCATCTACTCAAACCTCTTGG 57.786 45.455 0.00 0.00 39.83 3.61
7329 11693 3.840666 AGCATCTACTCAAACCTCTTGGA 59.159 43.478 0.00 0.00 37.04 3.53
7330 11694 4.287067 AGCATCTACTCAAACCTCTTGGAA 59.713 41.667 0.00 0.00 37.04 3.53
7491 11859 5.287226 CCTGACATACATTTACGAGGTACC 58.713 45.833 2.73 2.73 0.00 3.34
7492 11860 5.266733 TGACATACATTTACGAGGTACCC 57.733 43.478 8.74 0.00 0.00 3.69
7493 11861 4.099881 TGACATACATTTACGAGGTACCCC 59.900 45.833 8.74 0.00 0.00 4.95
7494 11862 3.389002 ACATACATTTACGAGGTACCCCC 59.611 47.826 8.74 0.00 0.00 5.40
7502 11870 2.785703 AGGTACCCCCTCTGTCCC 59.214 66.667 8.74 0.00 40.71 4.46
7503 11871 2.181773 AGGTACCCCCTCTGTCCCA 61.182 63.158 8.74 0.00 40.71 4.37
7504 11872 1.004361 GGTACCCCCTCTGTCCCAT 59.996 63.158 0.00 0.00 0.00 4.00
7505 11873 0.266753 GGTACCCCCTCTGTCCCATA 59.733 60.000 0.00 0.00 0.00 2.74
7506 11874 1.344701 GGTACCCCCTCTGTCCCATAA 60.345 57.143 0.00 0.00 0.00 1.90
7507 11875 2.699281 GGTACCCCCTCTGTCCCATAAT 60.699 54.545 0.00 0.00 0.00 1.28
7508 11876 1.522900 ACCCCCTCTGTCCCATAATG 58.477 55.000 0.00 0.00 0.00 1.90
7509 11877 1.275002 ACCCCCTCTGTCCCATAATGT 60.275 52.381 0.00 0.00 0.00 2.71
7510 11878 2.021441 ACCCCCTCTGTCCCATAATGTA 60.021 50.000 0.00 0.00 0.00 2.29
7511 11879 3.053077 CCCCCTCTGTCCCATAATGTAA 58.947 50.000 0.00 0.00 0.00 2.41
7512 11880 3.073062 CCCCCTCTGTCCCATAATGTAAG 59.927 52.174 0.00 0.00 0.00 2.34
7513 11881 3.973973 CCCCTCTGTCCCATAATGTAAGA 59.026 47.826 0.00 0.00 0.00 2.10
7514 11882 4.412199 CCCCTCTGTCCCATAATGTAAGAA 59.588 45.833 0.00 0.00 0.00 2.52
7515 11883 5.368989 CCCTCTGTCCCATAATGTAAGAAC 58.631 45.833 0.00 0.00 0.00 3.01
7516 11884 5.050490 CCTCTGTCCCATAATGTAAGAACG 58.950 45.833 0.00 0.00 0.00 3.95
7517 11885 5.395324 CCTCTGTCCCATAATGTAAGAACGT 60.395 44.000 0.00 0.00 0.00 3.99
7518 11886 6.045072 TCTGTCCCATAATGTAAGAACGTT 57.955 37.500 0.00 0.00 38.41 3.99
7519 11887 6.469410 TCTGTCCCATAATGTAAGAACGTTT 58.531 36.000 0.46 0.00 36.28 3.60
7520 11888 6.938030 TCTGTCCCATAATGTAAGAACGTTTT 59.062 34.615 0.46 0.00 36.28 2.43
7521 11889 7.446013 TCTGTCCCATAATGTAAGAACGTTTTT 59.554 33.333 9.22 9.22 36.28 1.94
7522 11890 7.364200 TGTCCCATAATGTAAGAACGTTTTTG 58.636 34.615 13.87 0.00 36.28 2.44
7523 11891 7.228906 TGTCCCATAATGTAAGAACGTTTTTGA 59.771 33.333 13.87 1.47 36.28 2.69
7524 11892 7.536281 GTCCCATAATGTAAGAACGTTTTTGAC 59.464 37.037 13.87 8.67 36.28 3.18
7525 11893 7.228906 TCCCATAATGTAAGAACGTTTTTGACA 59.771 33.333 13.87 13.12 36.28 3.58
7526 11894 7.325097 CCCATAATGTAAGAACGTTTTTGACAC 59.675 37.037 13.87 5.34 36.28 3.67
7527 11895 8.073768 CCATAATGTAAGAACGTTTTTGACACT 58.926 33.333 13.87 7.17 36.28 3.55
7530 11898 6.964741 TGTAAGAACGTTTTTGACACTACA 57.035 33.333 13.87 6.44 0.00 2.74
7531 11899 6.764094 TGTAAGAACGTTTTTGACACTACAC 58.236 36.000 13.87 2.68 0.00 2.90
7532 11900 6.591062 TGTAAGAACGTTTTTGACACTACACT 59.409 34.615 13.87 0.00 0.00 3.55
7533 11901 7.758980 TGTAAGAACGTTTTTGACACTACACTA 59.241 33.333 13.87 0.00 0.00 2.74
7534 11902 6.823678 AGAACGTTTTTGACACTACACTAG 57.176 37.500 0.46 0.00 0.00 2.57
7535 11903 6.335777 AGAACGTTTTTGACACTACACTAGT 58.664 36.000 0.46 0.00 40.28 2.57
7548 11916 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
7549 11917 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
7550 11918 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
7551 11919 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
7552 11920 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
7553 11921 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
7554 11922 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
7555 11923 9.953825 CACTAGTGTCAAAAACGTTCTTATATC 57.046 33.333 15.06 0.00 0.00 1.63
7556 11924 9.701098 ACTAGTGTCAAAAACGTTCTTATATCA 57.299 29.630 0.00 0.00 0.00 2.15
7557 11925 9.953825 CTAGTGTCAAAAACGTTCTTATATCAC 57.046 33.333 0.00 6.13 0.00 3.06
7558 11926 7.507304 AGTGTCAAAAACGTTCTTATATCACG 58.493 34.615 0.00 0.00 39.86 4.35
7559 11927 6.735063 GTGTCAAAAACGTTCTTATATCACGG 59.265 38.462 0.00 0.00 38.26 4.94
7560 11928 6.128499 TGTCAAAAACGTTCTTATATCACGGG 60.128 38.462 0.00 0.00 38.26 5.28
7561 11929 6.091169 GTCAAAAACGTTCTTATATCACGGGA 59.909 38.462 0.00 0.00 38.26 5.14
7562 11930 6.819649 TCAAAAACGTTCTTATATCACGGGAT 59.180 34.615 5.05 5.05 38.26 3.85
7563 11931 7.980662 TCAAAAACGTTCTTATATCACGGGATA 59.019 33.333 10.37 10.37 40.17 2.59
7564 11932 7.941795 AAAACGTTCTTATATCACGGGATAG 57.058 36.000 13.75 1.24 39.29 2.08
7565 11933 6.889301 AACGTTCTTATATCACGGGATAGA 57.111 37.500 13.75 5.61 39.29 1.98
7566 11934 6.497785 ACGTTCTTATATCACGGGATAGAG 57.502 41.667 13.75 12.97 39.29 2.43
7567 11935 5.415077 ACGTTCTTATATCACGGGATAGAGG 59.585 44.000 13.75 9.31 39.29 3.69
7568 11936 5.163642 CGTTCTTATATCACGGGATAGAGGG 60.164 48.000 13.75 5.87 39.29 4.30
7569 11937 5.791303 TCTTATATCACGGGATAGAGGGA 57.209 43.478 13.75 8.03 39.29 4.20
7570 11938 5.756918 TCTTATATCACGGGATAGAGGGAG 58.243 45.833 13.75 3.48 39.29 4.30
7571 11939 5.253330 TCTTATATCACGGGATAGAGGGAGT 59.747 44.000 13.75 0.00 39.29 3.85
7572 11940 6.446110 TCTTATATCACGGGATAGAGGGAGTA 59.554 42.308 13.75 0.00 39.29 2.59
7573 11941 2.653234 TCACGGGATAGAGGGAGTAC 57.347 55.000 0.00 0.00 0.00 2.73
7574 11942 1.848388 TCACGGGATAGAGGGAGTACA 59.152 52.381 0.00 0.00 0.00 2.90
7575 11943 1.955080 CACGGGATAGAGGGAGTACAC 59.045 57.143 0.00 0.00 0.00 2.90
7576 11944 1.851653 ACGGGATAGAGGGAGTACACT 59.148 52.381 0.00 0.00 0.00 3.55
7577 11945 2.244252 ACGGGATAGAGGGAGTACACTT 59.756 50.000 0.00 0.00 0.00 3.16
7578 11946 3.297736 CGGGATAGAGGGAGTACACTTT 58.702 50.000 0.00 0.00 0.00 2.66
7579 11947 3.705072 CGGGATAGAGGGAGTACACTTTT 59.295 47.826 0.00 0.00 0.00 2.27
7580 11948 4.441634 CGGGATAGAGGGAGTACACTTTTG 60.442 50.000 0.00 0.00 0.00 2.44
7581 11949 4.443621 GGATAGAGGGAGTACACTTTTGC 58.556 47.826 0.00 0.00 0.00 3.68
7582 11950 4.081087 GGATAGAGGGAGTACACTTTTGCA 60.081 45.833 0.00 0.00 0.00 4.08
7583 11951 3.857157 AGAGGGAGTACACTTTTGCAA 57.143 42.857 0.00 0.00 0.00 4.08
7584 11952 4.164843 AGAGGGAGTACACTTTTGCAAA 57.835 40.909 8.05 8.05 0.00 3.68
7585 11953 4.137543 AGAGGGAGTACACTTTTGCAAAG 58.862 43.478 12.41 9.23 0.00 2.77
7586 11954 4.134563 GAGGGAGTACACTTTTGCAAAGA 58.865 43.478 12.41 3.19 0.00 2.52
7587 11955 4.729868 AGGGAGTACACTTTTGCAAAGAT 58.270 39.130 12.41 1.57 0.00 2.40
7588 11956 5.876357 AGGGAGTACACTTTTGCAAAGATA 58.124 37.500 12.41 0.00 0.00 1.98
7589 11957 6.303839 AGGGAGTACACTTTTGCAAAGATAA 58.696 36.000 12.41 0.00 0.00 1.75
7590 11958 6.775629 AGGGAGTACACTTTTGCAAAGATAAA 59.224 34.615 12.41 0.00 0.00 1.40
7591 11959 7.286775 AGGGAGTACACTTTTGCAAAGATAAAA 59.713 33.333 12.41 0.00 0.00 1.52
7592 11960 7.381408 GGGAGTACACTTTTGCAAAGATAAAAC 59.619 37.037 12.41 8.01 0.00 2.43
7593 11961 7.918562 GGAGTACACTTTTGCAAAGATAAAACA 59.081 33.333 12.41 0.00 0.00 2.83
7594 11962 9.463443 GAGTACACTTTTGCAAAGATAAAACAT 57.537 29.630 12.41 0.00 0.00 2.71
7595 11963 9.463443 AGTACACTTTTGCAAAGATAAAACATC 57.537 29.630 12.41 0.00 0.00 3.06
7596 11964 9.243637 GTACACTTTTGCAAAGATAAAACATCA 57.756 29.630 12.41 0.00 0.00 3.07
7597 11965 8.130307 ACACTTTTGCAAAGATAAAACATCAC 57.870 30.769 12.41 0.00 0.00 3.06
7598 11966 7.981225 ACACTTTTGCAAAGATAAAACATCACT 59.019 29.630 12.41 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 0.527113 TATTCTTTCCCGCGTCGTCA 59.473 50.000 4.92 0.00 0.00 4.35
71 72 5.067805 ACTCTTAAGTTTGAAAGGTGGCAAG 59.932 40.000 1.63 0.00 28.74 4.01
156 799 5.367945 AGGTTATGCTCGGAGGAAATTTA 57.632 39.130 2.54 0.00 0.00 1.40
164 807 5.463724 GTGATCTTTTAGGTTATGCTCGGAG 59.536 44.000 0.00 0.00 0.00 4.63
167 813 5.360591 AGGTGATCTTTTAGGTTATGCTCG 58.639 41.667 0.00 0.00 0.00 5.03
185 831 1.518367 AGGGTTTTGTGAGGAGGTGA 58.482 50.000 0.00 0.00 0.00 4.02
264 914 3.773119 AGGTTGTATTTCGAGGAGCCTAA 59.227 43.478 0.00 0.00 0.00 2.69
283 933 7.230849 TGCATAAATGTCAAATCTTTGAGGT 57.769 32.000 5.63 0.00 46.80 3.85
290 940 5.163478 GCCTCCTTGCATAAATGTCAAATCT 60.163 40.000 0.00 0.00 0.00 2.40
296 946 2.620585 GAGGCCTCCTTGCATAAATGTC 59.379 50.000 23.19 0.00 31.76 3.06
313 963 2.437895 GTAAACCTGCGGGGAGGC 60.438 66.667 18.00 0.00 36.46 4.70
341 991 2.031919 ATTTCGTGTGGCCTGCGA 59.968 55.556 3.32 8.60 0.00 5.10
382 1038 1.691196 TGGAAACAAACTCTGGCCTG 58.309 50.000 3.32 2.92 37.44 4.85
418 1074 0.252103 TGCCTTCCTACGGGTCTTCT 60.252 55.000 0.00 0.00 0.00 2.85
431 1087 0.383949 TCCGCAAACAAACTGCCTTC 59.616 50.000 0.00 0.00 36.40 3.46
432 1088 1.000274 GATCCGCAAACAAACTGCCTT 60.000 47.619 0.00 0.00 36.40 4.35
507 1177 4.519213 GCTACTTGTAGTGAGAGAGGAGA 58.481 47.826 9.22 0.00 0.00 3.71
508 1178 3.630312 GGCTACTTGTAGTGAGAGAGGAG 59.370 52.174 9.22 0.00 0.00 3.69
509 1179 3.622630 GGCTACTTGTAGTGAGAGAGGA 58.377 50.000 9.22 0.00 0.00 3.71
510 1180 2.356382 CGGCTACTTGTAGTGAGAGAGG 59.644 54.545 9.22 0.00 0.00 3.69
511 1181 2.223386 GCGGCTACTTGTAGTGAGAGAG 60.223 54.545 9.22 0.00 0.00 3.20
595 1281 2.414840 CTTCGGGTTGGGTTTTGGCG 62.415 60.000 0.00 0.00 0.00 5.69
610 1296 0.027455 TGTTTCTGTTGTGCGCTTCG 59.973 50.000 9.73 0.00 0.00 3.79
611 1297 1.202132 TGTGTTTCTGTTGTGCGCTTC 60.202 47.619 9.73 2.14 0.00 3.86
612 1298 0.808125 TGTGTTTCTGTTGTGCGCTT 59.192 45.000 9.73 0.00 0.00 4.68
613 1299 0.098728 GTGTGTTTCTGTTGTGCGCT 59.901 50.000 9.73 0.00 0.00 5.92
614 1300 0.179176 TGTGTGTTTCTGTTGTGCGC 60.179 50.000 0.00 0.00 0.00 6.09
615 1301 1.396648 TCTGTGTGTTTCTGTTGTGCG 59.603 47.619 0.00 0.00 0.00 5.34
616 1302 3.171277 GTTCTGTGTGTTTCTGTTGTGC 58.829 45.455 0.00 0.00 0.00 4.57
617 1303 3.416277 CGTTCTGTGTGTTTCTGTTGTG 58.584 45.455 0.00 0.00 0.00 3.33
618 1304 2.418628 CCGTTCTGTGTGTTTCTGTTGT 59.581 45.455 0.00 0.00 0.00 3.32
810 1523 5.442130 CGAAAACGAAACAGAAGATCTCGAG 60.442 44.000 5.93 5.93 33.81 4.04
883 1599 3.081133 CAATCCGCCAACGACGAG 58.919 61.111 0.00 0.00 43.93 4.18
1305 2022 1.076777 ATGCCCGTTGGAAGATGGG 60.077 57.895 0.00 0.00 46.82 4.00
1340 2057 0.898320 ACCATCAACCTCAGACTCCG 59.102 55.000 0.00 0.00 0.00 4.63
1359 2076 0.320374 CACCTTCTACTTCGCCCACA 59.680 55.000 0.00 0.00 0.00 4.17
1508 2225 0.322816 AAGCACAGATTCCACGGCAT 60.323 50.000 0.00 0.00 0.00 4.40
1650 2367 1.271597 ACAATGGAACCAGACTCAGCC 60.272 52.381 0.00 0.00 0.00 4.85
1735 2452 3.033909 CACCTGATCCATCTGTACCTGA 58.966 50.000 0.00 0.00 0.00 3.86
1756 2473 2.283676 TCCAGTCACCCCCGAGAC 60.284 66.667 0.00 0.00 35.02 3.36
1803 2520 4.637091 TCGACGTTAATCACAGGATCAGTA 59.363 41.667 0.00 0.00 31.88 2.74
1819 2536 0.250124 TGTTTGCCCTCATCGACGTT 60.250 50.000 0.00 0.00 0.00 3.99
1966 2683 3.383185 GGCTCAGTAGTCAGTGCTTCTAT 59.617 47.826 0.00 0.00 0.00 1.98
1980 2697 4.101585 CCATCCAATACTTCAGGCTCAGTA 59.898 45.833 5.72 5.72 0.00 2.74
2046 2763 1.756561 AGGCCCGTTTGCAACAACT 60.757 52.632 0.00 0.00 0.00 3.16
2047 2764 1.591327 CAGGCCCGTTTGCAACAAC 60.591 57.895 0.00 0.00 0.00 3.32
2048 2765 2.790791 CCAGGCCCGTTTGCAACAA 61.791 57.895 0.00 0.00 0.00 2.83
2049 2766 3.222855 CCAGGCCCGTTTGCAACA 61.223 61.111 0.00 0.00 0.00 3.33
2050 2767 4.662961 GCCAGGCCCGTTTGCAAC 62.663 66.667 0.00 0.00 0.00 4.17
2051 2768 4.912395 AGCCAGGCCCGTTTGCAA 62.912 61.111 8.22 0.00 0.00 4.08
2054 2771 3.673484 CACAGCCAGGCCCGTTTG 61.673 66.667 8.22 1.23 0.00 2.93
2066 2783 0.536006 AGAAGTGTCCTTGGCACAGC 60.536 55.000 13.60 7.25 41.04 4.40
2067 2784 1.202687 TGAGAAGTGTCCTTGGCACAG 60.203 52.381 13.60 0.00 41.04 3.66
2068 2785 0.836606 TGAGAAGTGTCCTTGGCACA 59.163 50.000 13.60 3.47 41.04 4.57
2069 2786 1.517242 CTGAGAAGTGTCCTTGGCAC 58.483 55.000 0.00 6.24 38.58 5.01
2070 2787 0.250467 GCTGAGAAGTGTCCTTGGCA 60.250 55.000 0.00 0.00 0.00 4.92
2071 2788 0.957888 GGCTGAGAAGTGTCCTTGGC 60.958 60.000 0.00 0.00 0.00 4.52
2072 2789 0.689623 AGGCTGAGAAGTGTCCTTGG 59.310 55.000 0.00 0.00 0.00 3.61
2073 2790 1.345741 TCAGGCTGAGAAGTGTCCTTG 59.654 52.381 14.43 0.00 0.00 3.61
2074 2791 1.722034 TCAGGCTGAGAAGTGTCCTT 58.278 50.000 14.43 0.00 0.00 3.36
2075 2792 1.622811 CTTCAGGCTGAGAAGTGTCCT 59.377 52.381 17.91 0.00 38.11 3.85
2076 2793 2.091852 CTTCAGGCTGAGAAGTGTCC 57.908 55.000 17.91 0.00 38.11 4.02
2081 2798 4.478206 TCCAATACTTCAGGCTGAGAAG 57.522 45.455 17.91 15.40 46.08 2.85
2082 2799 4.384537 CCATCCAATACTTCAGGCTGAGAA 60.385 45.833 17.91 7.59 0.00 2.87
2083 2800 3.135348 CCATCCAATACTTCAGGCTGAGA 59.865 47.826 17.91 9.92 0.00 3.27
2084 2801 3.135348 TCCATCCAATACTTCAGGCTGAG 59.865 47.826 17.91 13.87 0.00 3.35
2085 2802 3.114606 TCCATCCAATACTTCAGGCTGA 58.885 45.455 14.43 14.43 0.00 4.26
2086 2803 3.474600 CTCCATCCAATACTTCAGGCTG 58.525 50.000 8.58 8.58 0.00 4.85
2087 2804 2.441001 CCTCCATCCAATACTTCAGGCT 59.559 50.000 0.00 0.00 0.00 4.58
2088 2805 2.856222 CCTCCATCCAATACTTCAGGC 58.144 52.381 0.00 0.00 0.00 4.85
2089 2806 2.808202 CGCCTCCATCCAATACTTCAGG 60.808 54.545 0.00 0.00 0.00 3.86
2090 2807 2.103094 TCGCCTCCATCCAATACTTCAG 59.897 50.000 0.00 0.00 0.00 3.02
2091 2808 2.115427 TCGCCTCCATCCAATACTTCA 58.885 47.619 0.00 0.00 0.00 3.02
2092 2809 2.910688 TCGCCTCCATCCAATACTTC 57.089 50.000 0.00 0.00 0.00 3.01
2093 2810 3.117888 ACAATCGCCTCCATCCAATACTT 60.118 43.478 0.00 0.00 0.00 2.24
2094 2811 2.439507 ACAATCGCCTCCATCCAATACT 59.560 45.455 0.00 0.00 0.00 2.12
2095 2812 2.549754 CACAATCGCCTCCATCCAATAC 59.450 50.000 0.00 0.00 0.00 1.89
2096 2813 2.437651 TCACAATCGCCTCCATCCAATA 59.562 45.455 0.00 0.00 0.00 1.90
2097 2814 1.212688 TCACAATCGCCTCCATCCAAT 59.787 47.619 0.00 0.00 0.00 3.16
2098 2815 0.617935 TCACAATCGCCTCCATCCAA 59.382 50.000 0.00 0.00 0.00 3.53
2099 2816 0.617935 TTCACAATCGCCTCCATCCA 59.382 50.000 0.00 0.00 0.00 3.41
2100 2817 1.303309 CTTCACAATCGCCTCCATCC 58.697 55.000 0.00 0.00 0.00 3.51
2101 2818 0.659957 GCTTCACAATCGCCTCCATC 59.340 55.000 0.00 0.00 0.00 3.51
2102 2819 1.091771 CGCTTCACAATCGCCTCCAT 61.092 55.000 0.00 0.00 0.00 3.41
2103 2820 1.741401 CGCTTCACAATCGCCTCCA 60.741 57.895 0.00 0.00 0.00 3.86
2104 2821 1.447838 TCGCTTCACAATCGCCTCC 60.448 57.895 0.00 0.00 0.00 4.30
2105 2822 0.737715 AGTCGCTTCACAATCGCCTC 60.738 55.000 0.00 0.00 0.00 4.70
2106 2823 0.320771 AAGTCGCTTCACAATCGCCT 60.321 50.000 0.00 0.00 0.00 5.52
2107 2824 0.095417 GAAGTCGCTTCACAATCGCC 59.905 55.000 12.72 0.00 39.95 5.54
2108 2825 1.071605 AGAAGTCGCTTCACAATCGC 58.928 50.000 17.76 0.00 42.37 4.58
2109 2826 3.304559 CCTTAGAAGTCGCTTCACAATCG 59.695 47.826 17.76 5.15 42.37 3.34
2110 2827 3.619038 CCCTTAGAAGTCGCTTCACAATC 59.381 47.826 17.76 0.00 42.37 2.67
2111 2828 3.260884 TCCCTTAGAAGTCGCTTCACAAT 59.739 43.478 17.76 4.23 42.37 2.71
2112 2829 2.631062 TCCCTTAGAAGTCGCTTCACAA 59.369 45.455 17.76 11.67 42.37 3.33
2113 2830 2.029290 GTCCCTTAGAAGTCGCTTCACA 60.029 50.000 17.76 6.24 42.37 3.58
2114 2831 2.608268 GTCCCTTAGAAGTCGCTTCAC 58.392 52.381 17.76 6.22 42.37 3.18
2115 2832 1.549170 GGTCCCTTAGAAGTCGCTTCA 59.451 52.381 17.76 5.48 42.37 3.02
2116 2833 1.826096 AGGTCCCTTAGAAGTCGCTTC 59.174 52.381 10.44 10.44 40.45 3.86
2117 2834 1.939980 AGGTCCCTTAGAAGTCGCTT 58.060 50.000 0.00 0.00 0.00 4.68
2118 2835 1.826096 GAAGGTCCCTTAGAAGTCGCT 59.174 52.381 0.00 0.00 36.26 4.93
2119 2836 1.549170 TGAAGGTCCCTTAGAAGTCGC 59.451 52.381 0.00 0.00 36.26 5.19
2120 2837 3.090037 TCTGAAGGTCCCTTAGAAGTCG 58.910 50.000 0.00 0.00 36.26 4.18
2121 2838 4.773149 TCTTCTGAAGGTCCCTTAGAAGTC 59.227 45.833 24.98 8.41 40.16 3.01
2122 2839 4.753186 TCTTCTGAAGGTCCCTTAGAAGT 58.247 43.478 24.98 0.90 40.16 3.01
2123 2840 4.161377 CCTCTTCTGAAGGTCCCTTAGAAG 59.839 50.000 22.87 22.87 40.33 2.85
2124 2841 4.097418 CCTCTTCTGAAGGTCCCTTAGAA 58.903 47.826 16.83 7.83 36.26 2.10
2125 2842 3.336997 TCCTCTTCTGAAGGTCCCTTAGA 59.663 47.826 16.83 0.00 36.26 2.10
2126 2843 3.714144 TCCTCTTCTGAAGGTCCCTTAG 58.286 50.000 16.83 5.48 36.26 2.18
2127 2844 3.847042 TCCTCTTCTGAAGGTCCCTTA 57.153 47.619 16.83 0.00 36.26 2.69
2128 2845 2.723530 TCCTCTTCTGAAGGTCCCTT 57.276 50.000 16.83 0.00 39.23 3.95
2129 2846 2.158081 ACTTCCTCTTCTGAAGGTCCCT 60.158 50.000 16.83 0.00 42.79 4.20
2130 2847 2.261729 ACTTCCTCTTCTGAAGGTCCC 58.738 52.381 16.83 0.00 42.79 4.46
2131 2848 3.071747 ACAACTTCCTCTTCTGAAGGTCC 59.928 47.826 16.83 0.00 42.79 4.46
2132 2849 4.344359 ACAACTTCCTCTTCTGAAGGTC 57.656 45.455 16.83 0.00 42.79 3.85
2133 2850 4.455606 CAACAACTTCCTCTTCTGAAGGT 58.544 43.478 16.83 4.23 42.79 3.50
2134 2851 3.251972 GCAACAACTTCCTCTTCTGAAGG 59.748 47.826 16.83 3.31 42.79 3.46
2135 2852 3.879295 TGCAACAACTTCCTCTTCTGAAG 59.121 43.478 11.18 11.18 43.82 3.02
2136 2853 3.884895 TGCAACAACTTCCTCTTCTGAA 58.115 40.909 0.00 0.00 0.00 3.02
2137 2854 3.558931 TGCAACAACTTCCTCTTCTGA 57.441 42.857 0.00 0.00 0.00 3.27
2138 2855 4.354587 GTTTGCAACAACTTCCTCTTCTG 58.645 43.478 0.00 0.00 0.00 3.02
2139 2856 3.065371 CGTTTGCAACAACTTCCTCTTCT 59.935 43.478 0.00 0.00 0.00 2.85
2140 2857 3.363178 CGTTTGCAACAACTTCCTCTTC 58.637 45.455 0.00 0.00 0.00 2.87
2141 2858 2.099098 CCGTTTGCAACAACTTCCTCTT 59.901 45.455 0.00 0.00 0.00 2.85
2142 2859 1.676006 CCGTTTGCAACAACTTCCTCT 59.324 47.619 0.00 0.00 0.00 3.69
2143 2860 1.269051 CCCGTTTGCAACAACTTCCTC 60.269 52.381 0.00 0.00 0.00 3.71
2144 2861 0.744281 CCCGTTTGCAACAACTTCCT 59.256 50.000 0.00 0.00 0.00 3.36
2145 2862 0.874175 GCCCGTTTGCAACAACTTCC 60.874 55.000 0.00 0.00 0.00 3.46
2146 2863 0.102300 AGCCCGTTTGCAACAACTTC 59.898 50.000 0.00 0.00 0.00 3.01
2147 2864 0.534873 AAGCCCGTTTGCAACAACTT 59.465 45.000 0.00 0.00 0.00 2.66
2231 2948 0.467290 GCCCTCCACTTCAACCACAA 60.467 55.000 0.00 0.00 0.00 3.33
2249 2966 4.499357 CCTCACCATCCTTTACTACTACGC 60.499 50.000 0.00 0.00 0.00 4.42
2258 2975 2.605825 ATCCCCCTCACCATCCTTTA 57.394 50.000 0.00 0.00 0.00 1.85
2426 3143 4.670896 TGTGTGACAGAAGAGACATCAA 57.329 40.909 0.00 0.00 0.00 2.57
2555 3272 3.067320 TGCGTTCATTTCCAACATGACAA 59.933 39.130 0.00 0.00 30.09 3.18
2575 3292 0.522076 GTTTGCACGCTATCTGCTGC 60.522 55.000 0.00 0.00 42.19 5.25
2589 3306 1.464997 GACTTGAGATCCGGTGTTTGC 59.535 52.381 0.00 0.00 0.00 3.68
2598 3315 1.410517 TCAGATGCCGACTTGAGATCC 59.589 52.381 0.00 0.00 0.00 3.36
2718 3465 8.375506 TGTTTTCCAGTCTGTACAGAAGAATAT 58.624 33.333 26.74 6.64 39.48 1.28
2719 3466 7.732025 TGTTTTCCAGTCTGTACAGAAGAATA 58.268 34.615 26.74 19.36 39.48 1.75
2720 3467 6.591935 TGTTTTCCAGTCTGTACAGAAGAAT 58.408 36.000 26.74 10.76 39.48 2.40
2721 3468 5.984725 TGTTTTCCAGTCTGTACAGAAGAA 58.015 37.500 26.74 23.57 39.48 2.52
2722 3469 5.607939 TGTTTTCCAGTCTGTACAGAAGA 57.392 39.130 26.74 19.64 39.48 2.87
2723 3470 5.991606 TCATGTTTTCCAGTCTGTACAGAAG 59.008 40.000 26.74 20.60 39.48 2.85
2724 3471 5.924356 TCATGTTTTCCAGTCTGTACAGAA 58.076 37.500 26.74 9.04 39.48 3.02
2725 3472 5.541845 CTCATGTTTTCCAGTCTGTACAGA 58.458 41.667 21.74 21.74 34.56 3.41
2726 3473 4.153117 GCTCATGTTTTCCAGTCTGTACAG 59.847 45.833 17.17 17.17 0.00 2.74
2727 3474 4.065088 GCTCATGTTTTCCAGTCTGTACA 58.935 43.478 0.00 0.00 0.00 2.90
2728 3475 4.065088 TGCTCATGTTTTCCAGTCTGTAC 58.935 43.478 0.00 0.00 0.00 2.90
2729 3476 4.202357 ACTGCTCATGTTTTCCAGTCTGTA 60.202 41.667 0.00 0.00 31.61 2.74
2730 3477 3.144506 CTGCTCATGTTTTCCAGTCTGT 58.855 45.455 0.00 0.00 0.00 3.41
2731 3478 3.144506 ACTGCTCATGTTTTCCAGTCTG 58.855 45.455 0.00 0.00 31.61 3.51
2732 3479 3.498774 ACTGCTCATGTTTTCCAGTCT 57.501 42.857 0.00 0.00 31.61 3.24
2733 3480 3.304928 CCAACTGCTCATGTTTTCCAGTC 60.305 47.826 0.00 0.00 35.86 3.51
2734 3481 2.624838 CCAACTGCTCATGTTTTCCAGT 59.375 45.455 0.00 0.00 38.30 4.00
2735 3482 2.886523 TCCAACTGCTCATGTTTTCCAG 59.113 45.455 0.00 0.00 0.00 3.86
2736 3483 2.942804 TCCAACTGCTCATGTTTTCCA 58.057 42.857 0.00 0.00 0.00 3.53
2737 3484 4.525912 ATTCCAACTGCTCATGTTTTCC 57.474 40.909 0.00 0.00 0.00 3.13
2738 3485 5.863935 GGTAATTCCAACTGCTCATGTTTTC 59.136 40.000 0.00 0.00 35.97 2.29
2739 3486 5.539955 AGGTAATTCCAACTGCTCATGTTTT 59.460 36.000 0.00 0.00 39.02 2.43
2740 3487 5.047802 CAGGTAATTCCAACTGCTCATGTTT 60.048 40.000 0.00 0.00 39.02 2.83
2741 3488 4.460382 CAGGTAATTCCAACTGCTCATGTT 59.540 41.667 0.00 0.00 39.02 2.71
2742 3489 4.012374 CAGGTAATTCCAACTGCTCATGT 58.988 43.478 0.00 0.00 39.02 3.21
2743 3490 3.379372 CCAGGTAATTCCAACTGCTCATG 59.621 47.826 0.00 0.00 39.02 3.07
2744 3491 3.624777 CCAGGTAATTCCAACTGCTCAT 58.375 45.455 0.00 0.00 39.02 2.90
2745 3492 2.879756 GCCAGGTAATTCCAACTGCTCA 60.880 50.000 0.00 0.00 39.02 4.26
2746 3493 1.745653 GCCAGGTAATTCCAACTGCTC 59.254 52.381 0.00 0.00 39.02 4.26
2747 3494 1.075374 TGCCAGGTAATTCCAACTGCT 59.925 47.619 0.00 0.00 39.02 4.24
3032 3779 0.518636 CACAGCAGTTCCATGTTCCG 59.481 55.000 0.00 0.00 0.00 4.30
3208 3955 1.466167 CGAAACATCACCAGCTTCAGG 59.534 52.381 0.00 0.00 0.00 3.86
3209 3956 1.135859 GCGAAACATCACCAGCTTCAG 60.136 52.381 0.00 0.00 0.00 3.02
3298 4045 2.596452 CTCTTCACGCGTAGTTGATGT 58.404 47.619 13.44 0.00 0.00 3.06
3399 4146 1.079819 CTCATCTGACGTGGCGGTT 60.080 57.895 0.00 0.00 0.00 4.44
3580 4331 4.833390 ACTAGGGTCAGCATTTGTACTTC 58.167 43.478 0.00 0.00 0.00 3.01
3679 4430 3.297134 TCTTCTCCTTGCCTTTGTGTT 57.703 42.857 0.00 0.00 0.00 3.32
3770 4521 0.767375 ACTTGTGTGGCCTCATGAGT 59.233 50.000 21.11 14.20 0.00 3.41
4046 4797 0.740164 ATGTGCAGCTCTCGCTTCAG 60.740 55.000 0.00 0.00 46.47 3.02
4164 6414 5.527582 GGTAATAAGGTCAATACACCAGCAG 59.472 44.000 0.00 0.00 39.16 4.24
4491 6762 8.423906 AGTCTAGAGAAAAGAACATAGGTCAA 57.576 34.615 0.00 0.00 0.00 3.18
4675 6950 1.298014 CCCTCTCAGCTCAACCCAC 59.702 63.158 0.00 0.00 0.00 4.61
4843 7128 9.757227 GAAATACTACAGAATAGACTCTGCATT 57.243 33.333 0.56 0.00 45.72 3.56
4963 7248 2.618816 CCACTTGATAAGAGCTTGCCCA 60.619 50.000 0.00 0.00 0.00 5.36
5051 7336 7.041098 CCATCCTACCAAATGCATAACTAAGAC 60.041 40.741 0.00 0.00 0.00 3.01
5212 7519 4.184629 CACTTATTTTGAGACGGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
5213 7520 3.581332 ACACTTATTTTGAGACGGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
5214 7521 3.933332 GACACTTATTTTGAGACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
5215 7522 4.822026 AGACACTTATTTTGAGACGGAGG 58.178 43.478 0.00 0.00 0.00 4.30
5216 7523 5.926542 TCAAGACACTTATTTTGAGACGGAG 59.073 40.000 0.00 0.00 0.00 4.63
5217 7524 5.849510 TCAAGACACTTATTTTGAGACGGA 58.150 37.500 0.00 0.00 0.00 4.69
5218 7525 5.389935 GCTCAAGACACTTATTTTGAGACGG 60.390 44.000 15.10 0.00 45.82 4.79
5219 7526 5.406780 AGCTCAAGACACTTATTTTGAGACG 59.593 40.000 15.10 0.00 45.82 4.18
5220 7527 6.793492 AGCTCAAGACACTTATTTTGAGAC 57.207 37.500 15.10 7.85 45.82 3.36
5221 7528 8.150945 ACTAAGCTCAAGACACTTATTTTGAGA 58.849 33.333 15.10 0.00 45.82 3.27
5222 7529 8.316640 ACTAAGCTCAAGACACTTATTTTGAG 57.683 34.615 8.33 8.33 45.75 3.02
5223 7530 9.204570 GTACTAAGCTCAAGACACTTATTTTGA 57.795 33.333 3.19 0.00 0.00 2.69
5224 7531 8.988934 TGTACTAAGCTCAAGACACTTATTTTG 58.011 33.333 3.19 0.00 0.00 2.44
5225 7532 9.555727 TTGTACTAAGCTCAAGACACTTATTTT 57.444 29.630 3.19 0.00 0.00 1.82
5226 7533 9.555727 TTTGTACTAAGCTCAAGACACTTATTT 57.444 29.630 3.19 0.00 0.00 1.40
5227 7534 9.726438 ATTTGTACTAAGCTCAAGACACTTATT 57.274 29.630 3.19 0.00 0.00 1.40
5228 7535 9.726438 AATTTGTACTAAGCTCAAGACACTTAT 57.274 29.630 3.19 0.00 0.00 1.73
5229 7536 9.555727 AAATTTGTACTAAGCTCAAGACACTTA 57.444 29.630 3.19 0.00 0.00 2.24
5230 7537 8.345565 CAAATTTGTACTAAGCTCAAGACACTT 58.654 33.333 10.15 0.00 0.00 3.16
5231 7538 7.499232 ACAAATTTGTACTAAGCTCAAGACACT 59.501 33.333 22.10 0.00 40.16 3.55
5232 7539 7.639945 ACAAATTTGTACTAAGCTCAAGACAC 58.360 34.615 22.10 2.09 40.16 3.67
5233 7540 7.801716 ACAAATTTGTACTAAGCTCAAGACA 57.198 32.000 22.10 0.00 40.16 3.41
5257 7564 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
5259 7566 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
5260 7567 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
5261 7568 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
5262 7569 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
5263 7570 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
5264 7571 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
5267 7574 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
5268 7575 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
5269 7576 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
5270 7577 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
5271 7578 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
5272 7579 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
5273 7580 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
5274 7581 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
5275 7582 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
5276 7583 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
5277 7584 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
5278 7585 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
5279 7586 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
5280 7587 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
5281 7588 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
5282 7589 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
5283 7590 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
5284 7591 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
5285 7592 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
5286 7593 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
5287 7594 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
5288 7595 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
5289 7596 1.961133 ATTACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
5290 7597 2.292389 TGTATTACTCCCTCCGTCCCAA 60.292 50.000 0.00 0.00 0.00 4.12
5291 7598 1.288633 TGTATTACTCCCTCCGTCCCA 59.711 52.381 0.00 0.00 0.00 4.37
5292 7599 2.077687 TGTATTACTCCCTCCGTCCC 57.922 55.000 0.00 0.00 0.00 4.46
5293 7600 5.997384 AATATGTATTACTCCCTCCGTCC 57.003 43.478 0.00 0.00 0.00 4.79
5294 7601 6.989659 TCAAATATGTATTACTCCCTCCGTC 58.010 40.000 0.00 0.00 0.00 4.79
5295 7602 6.989155 TCAAATATGTATTACTCCCTCCGT 57.011 37.500 0.00 0.00 0.00 4.69
5296 7603 7.878127 ACATTCAAATATGTATTACTCCCTCCG 59.122 37.037 0.00 0.00 36.99 4.63
5612 7969 4.970860 AGTGATCTTCCATCATGGGTAG 57.029 45.455 3.05 2.02 38.32 3.18
5956 8319 1.407437 CGCCTTCCTTGCTAACTCCAT 60.407 52.381 0.00 0.00 0.00 3.41
6218 8583 8.153550 AGAATTAATAATTTGTTGTGTGGGCAA 58.846 29.630 0.00 0.00 0.00 4.52
6301 8666 0.950555 TTGCTAAGTCTGCTGGTGCG 60.951 55.000 0.00 0.00 43.34 5.34
6302 8667 0.801251 CTTGCTAAGTCTGCTGGTGC 59.199 55.000 0.00 0.00 40.20 5.01
6335 8700 3.384789 TCTGTTGTAGCTATAGGTGCAGG 59.615 47.826 19.73 14.65 39.16 4.85
6350 8715 1.064060 GTTGCTTTCAGCGTCTGTTGT 59.936 47.619 6.72 0.00 46.26 3.32
6353 8718 0.657840 GTGTTGCTTTCAGCGTCTGT 59.342 50.000 6.72 0.00 46.26 3.41
6359 8724 1.024271 TCAGGTGTGTTGCTTTCAGC 58.976 50.000 0.00 0.00 42.82 4.26
6379 8744 6.595682 AGGAACATCAACATCCCTAGTATTG 58.404 40.000 0.00 0.00 33.55 1.90
6412 8777 2.608550 TTTACCGGGCCTCCTTGGG 61.609 63.158 6.32 0.00 36.00 4.12
6415 8780 1.848886 CTGGTTTACCGGGCCTCCTT 61.849 60.000 6.32 0.00 38.76 3.36
6417 8782 2.271173 CTGGTTTACCGGGCCTCC 59.729 66.667 6.32 3.55 38.76 4.30
6418 8783 2.437895 GCTGGTTTACCGGGCCTC 60.438 66.667 6.32 0.00 42.72 4.70
6420 8785 2.750237 CTGCTGGTTTACCGGGCC 60.750 66.667 6.32 0.00 42.72 5.80
6421 8786 2.033602 ACTGCTGGTTTACCGGGC 59.966 61.111 6.32 9.27 42.72 6.13
6422 8787 0.673644 CTCACTGCTGGTTTACCGGG 60.674 60.000 6.32 0.00 42.72 5.73
6423 8788 0.673644 CCTCACTGCTGGTTTACCGG 60.674 60.000 0.00 0.00 45.30 5.28
6424 8789 1.298859 GCCTCACTGCTGGTTTACCG 61.299 60.000 0.00 0.00 39.43 4.02
6425 8790 0.250727 TGCCTCACTGCTGGTTTACC 60.251 55.000 0.00 0.00 0.00 2.85
6426 8791 1.160137 CTGCCTCACTGCTGGTTTAC 58.840 55.000 0.00 0.00 0.00 2.01
6427 8792 0.606401 GCTGCCTCACTGCTGGTTTA 60.606 55.000 0.00 0.00 39.94 2.01
6429 8794 2.282040 GCTGCCTCACTGCTGGTT 60.282 61.111 0.00 0.00 39.94 3.67
6436 8801 4.719106 GGCTGCAGCTGCCTCACT 62.719 66.667 35.82 0.00 43.62 3.41
6578 8952 8.088981 ACTAATTCAGAAGCGAAGAGAACTTAA 58.911 33.333 0.00 0.00 36.39 1.85
6587 8961 9.224058 GTAGTACTAACTAATTCAGAAGCGAAG 57.776 37.037 3.61 0.00 39.90 3.79
6636 9010 2.613595 TGGATGAAGAATATGTGCGCAC 59.386 45.455 33.11 33.11 0.00 5.34
6763 9137 8.927675 AATAGGTACAGTAAAACAACATCCAA 57.072 30.769 0.00 0.00 0.00 3.53
6959 9382 1.542915 ACCAACTGAACATGATGCAGC 59.457 47.619 0.00 0.00 33.03 5.25
6995 9418 3.087031 CCAAAGAGCATGTGATTCCAGT 58.913 45.455 0.00 0.00 0.00 4.00
7012 9435 1.074248 GGTTTCTCCGGCTCCCAAA 59.926 57.895 0.00 0.00 0.00 3.28
7017 9440 1.303309 CATGATGGTTTCTCCGGCTC 58.697 55.000 0.00 0.00 39.52 4.70
7067 9490 8.697507 AATCAAATAGGCCTCTATGTAAAAGG 57.302 34.615 9.68 0.00 36.40 3.11
7074 9497 8.906867 TCTTTTTGAATCAAATAGGCCTCTATG 58.093 33.333 20.45 6.92 36.40 2.23
7190 9613 2.002018 AACCGAACAAGGCCTTGGGA 62.002 55.000 41.04 0.00 44.45 4.37
7194 9617 1.951602 GTGTAAACCGAACAAGGCCTT 59.048 47.619 13.78 13.78 33.69 4.35
7224 9647 0.254299 ACAATCCCCTCCAATCCCCT 60.254 55.000 0.00 0.00 0.00 4.79
7225 9648 0.106015 CACAATCCCCTCCAATCCCC 60.106 60.000 0.00 0.00 0.00 4.81
7226 9649 0.106015 CCACAATCCCCTCCAATCCC 60.106 60.000 0.00 0.00 0.00 3.85
7227 9650 0.631212 ACCACAATCCCCTCCAATCC 59.369 55.000 0.00 0.00 0.00 3.01
7228 9651 2.777692 TCTACCACAATCCCCTCCAATC 59.222 50.000 0.00 0.00 0.00 2.67
7229 9652 2.509964 GTCTACCACAATCCCCTCCAAT 59.490 50.000 0.00 0.00 0.00 3.16
7230 9653 1.913419 GTCTACCACAATCCCCTCCAA 59.087 52.381 0.00 0.00 0.00 3.53
7231 9654 1.080498 AGTCTACCACAATCCCCTCCA 59.920 52.381 0.00 0.00 0.00 3.86
7232 9655 1.880941 AGTCTACCACAATCCCCTCC 58.119 55.000 0.00 0.00 0.00 4.30
7233 9656 4.040584 GGATAAGTCTACCACAATCCCCTC 59.959 50.000 0.00 0.00 35.29 4.30
7260 9683 0.395862 TTTTGGCCCTGTTCGGTTGA 60.396 50.000 0.00 0.00 0.00 3.18
7366 11732 9.976511 AAGATTGAATGGATACTAAATTGCATG 57.023 29.630 0.00 0.00 37.61 4.06
7498 11866 7.536281 GTCAAAAACGTTCTTACATTATGGGAC 59.464 37.037 0.00 0.00 0.00 4.46
7499 11867 7.228906 TGTCAAAAACGTTCTTACATTATGGGA 59.771 33.333 0.00 0.00 0.00 4.37
7500 11868 7.325097 GTGTCAAAAACGTTCTTACATTATGGG 59.675 37.037 0.00 0.00 0.00 4.00
7501 11869 8.073768 AGTGTCAAAAACGTTCTTACATTATGG 58.926 33.333 0.00 0.00 0.00 2.74
7504 11872 9.096160 TGTAGTGTCAAAAACGTTCTTACATTA 57.904 29.630 0.00 3.08 0.00 1.90
7505 11873 7.906527 GTGTAGTGTCAAAAACGTTCTTACATT 59.093 33.333 0.00 4.02 0.00 2.71
7506 11874 7.279313 AGTGTAGTGTCAAAAACGTTCTTACAT 59.721 33.333 0.00 0.00 0.00 2.29
7507 11875 6.591062 AGTGTAGTGTCAAAAACGTTCTTACA 59.409 34.615 0.00 1.33 0.00 2.41
7508 11876 6.997222 AGTGTAGTGTCAAAAACGTTCTTAC 58.003 36.000 0.00 0.00 0.00 2.34
7509 11877 7.975616 ACTAGTGTAGTGTCAAAAACGTTCTTA 59.024 33.333 0.00 0.00 37.69 2.10
7510 11878 6.815142 ACTAGTGTAGTGTCAAAAACGTTCTT 59.185 34.615 0.00 0.00 37.69 2.52
7511 11879 6.335777 ACTAGTGTAGTGTCAAAAACGTTCT 58.664 36.000 0.00 0.00 37.69 3.01
7512 11880 6.579491 ACTAGTGTAGTGTCAAAAACGTTC 57.421 37.500 0.00 0.00 37.69 3.95
7525 11893 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
7526 11894 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
7527 11895 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
7529 11897 9.953825 GATATAAGAACGTTTTTGACACTAGTG 57.046 33.333 21.44 21.44 0.00 2.74
7530 11898 9.701098 TGATATAAGAACGTTTTTGACACTAGT 57.299 29.630 13.87 0.00 0.00 2.57
7531 11899 9.953825 GTGATATAAGAACGTTTTTGACACTAG 57.046 33.333 13.87 0.00 0.00 2.57
7532 11900 8.641155 CGTGATATAAGAACGTTTTTGACACTA 58.359 33.333 13.87 0.00 32.79 2.74
7533 11901 7.359765 CCGTGATATAAGAACGTTTTTGACACT 60.360 37.037 13.87 0.00 35.59 3.55
7534 11902 6.735063 CCGTGATATAAGAACGTTTTTGACAC 59.265 38.462 13.87 14.64 35.59 3.67
7535 11903 6.128499 CCCGTGATATAAGAACGTTTTTGACA 60.128 38.462 13.87 6.15 35.59 3.58
7536 11904 6.091169 TCCCGTGATATAAGAACGTTTTTGAC 59.909 38.462 13.87 0.00 35.59 3.18
7537 11905 6.164876 TCCCGTGATATAAGAACGTTTTTGA 58.835 36.000 13.87 2.81 35.59 2.69
7538 11906 6.411630 TCCCGTGATATAAGAACGTTTTTG 57.588 37.500 13.87 0.00 35.59 2.44
7539 11907 8.199449 TCTATCCCGTGATATAAGAACGTTTTT 58.801 33.333 9.22 9.22 35.59 1.94
7540 11908 7.719483 TCTATCCCGTGATATAAGAACGTTTT 58.281 34.615 0.46 0.00 35.59 2.43
7541 11909 7.281040 TCTATCCCGTGATATAAGAACGTTT 57.719 36.000 0.46 0.00 35.59 3.60
7542 11910 6.072064 CCTCTATCCCGTGATATAAGAACGTT 60.072 42.308 0.00 0.00 35.59 3.99
7543 11911 5.415077 CCTCTATCCCGTGATATAAGAACGT 59.585 44.000 0.00 0.00 35.59 3.99
7544 11912 5.163642 CCCTCTATCCCGTGATATAAGAACG 60.164 48.000 0.00 0.00 33.08 3.95
7545 11913 5.950549 TCCCTCTATCCCGTGATATAAGAAC 59.049 44.000 0.00 0.00 33.08 3.01
7546 11914 6.148735 TCCCTCTATCCCGTGATATAAGAA 57.851 41.667 0.00 0.00 33.08 2.52
7547 11915 5.253330 ACTCCCTCTATCCCGTGATATAAGA 59.747 44.000 0.00 0.00 33.08 2.10
7548 11916 5.511363 ACTCCCTCTATCCCGTGATATAAG 58.489 45.833 0.00 0.00 33.08 1.73
7549 11917 5.531753 ACTCCCTCTATCCCGTGATATAA 57.468 43.478 0.00 0.00 33.08 0.98
7550 11918 5.489997 TGTACTCCCTCTATCCCGTGATATA 59.510 44.000 0.00 0.00 33.08 0.86
7551 11919 4.291513 TGTACTCCCTCTATCCCGTGATAT 59.708 45.833 0.00 0.00 33.08 1.63
7552 11920 3.654321 TGTACTCCCTCTATCCCGTGATA 59.346 47.826 0.00 0.00 32.18 2.15
7553 11921 2.445905 TGTACTCCCTCTATCCCGTGAT 59.554 50.000 0.00 0.00 34.87 3.06
7554 11922 1.848388 TGTACTCCCTCTATCCCGTGA 59.152 52.381 0.00 0.00 0.00 4.35
7555 11923 1.955080 GTGTACTCCCTCTATCCCGTG 59.045 57.143 0.00 0.00 0.00 4.94
7556 11924 1.851653 AGTGTACTCCCTCTATCCCGT 59.148 52.381 0.00 0.00 0.00 5.28
7557 11925 2.660670 AGTGTACTCCCTCTATCCCG 57.339 55.000 0.00 0.00 0.00 5.14
7558 11926 4.683671 GCAAAAGTGTACTCCCTCTATCCC 60.684 50.000 0.00 0.00 0.00 3.85
7559 11927 4.081087 TGCAAAAGTGTACTCCCTCTATCC 60.081 45.833 0.00 0.00 0.00 2.59
7560 11928 5.086104 TGCAAAAGTGTACTCCCTCTATC 57.914 43.478 0.00 0.00 0.00 2.08
7561 11929 5.499004 TTGCAAAAGTGTACTCCCTCTAT 57.501 39.130 0.00 0.00 0.00 1.98
7562 11930 4.967084 TTGCAAAAGTGTACTCCCTCTA 57.033 40.909 0.00 0.00 0.00 2.43
7563 11931 3.857157 TTGCAAAAGTGTACTCCCTCT 57.143 42.857 0.00 0.00 0.00 3.69
7564 11932 4.134563 TCTTTGCAAAAGTGTACTCCCTC 58.865 43.478 13.84 0.00 0.00 4.30
7565 11933 4.164843 TCTTTGCAAAAGTGTACTCCCT 57.835 40.909 13.84 0.00 0.00 4.20
7566 11934 6.569179 TTATCTTTGCAAAAGTGTACTCCC 57.431 37.500 13.84 0.00 0.00 4.30
7567 11935 7.918562 TGTTTTATCTTTGCAAAAGTGTACTCC 59.081 33.333 13.84 0.00 0.00 3.85
7568 11936 8.850454 TGTTTTATCTTTGCAAAAGTGTACTC 57.150 30.769 13.84 2.07 0.00 2.59
7569 11937 9.463443 GATGTTTTATCTTTGCAAAAGTGTACT 57.537 29.630 13.84 0.00 0.00 2.73
7570 11938 9.243637 TGATGTTTTATCTTTGCAAAAGTGTAC 57.756 29.630 13.84 7.94 0.00 2.90
7571 11939 9.243637 GTGATGTTTTATCTTTGCAAAAGTGTA 57.756 29.630 13.84 1.34 0.00 2.90
7572 11940 7.981225 AGTGATGTTTTATCTTTGCAAAAGTGT 59.019 29.630 13.84 2.28 0.00 3.55
7573 11941 8.356533 AGTGATGTTTTATCTTTGCAAAAGTG 57.643 30.769 13.84 1.77 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.