Multiple sequence alignment - TraesCS5B01G256800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G256800 chr5B 100.000 5199 0 0 1 5199 439266370 439271568 0.000000e+00 9601.0
1 TraesCS5B01G256800 chr5B 86.470 1626 141 27 2366 3952 531626190 531624605 0.000000e+00 1711.0
2 TraesCS5B01G256800 chr5B 85.525 1589 172 30 2732 4282 531637139 531635571 0.000000e+00 1607.0
3 TraesCS5B01G256800 chr5B 79.097 1196 169 45 1220 2367 531707488 531706326 0.000000e+00 749.0
4 TraesCS5B01G256800 chr5B 78.930 1196 171 45 1220 2367 531640808 531641970 0.000000e+00 737.0
5 TraesCS5B01G256800 chr5B 84.827 692 64 14 1220 1890 531627385 531626714 0.000000e+00 658.0
6 TraesCS5B01G256800 chr5B 89.532 449 42 3 4752 5199 531621644 531621200 9.770000e-157 564.0
7 TraesCS5B01G256800 chr5B 85.907 518 62 4 4683 5199 531635114 531634607 4.580000e-150 542.0
8 TraesCS5B01G256800 chr5B 87.224 407 35 9 1980 2373 531626694 531626292 1.030000e-121 448.0
9 TraesCS5B01G256800 chr5B 91.089 303 21 4 4291 4593 531624030 531623734 6.270000e-109 405.0
10 TraesCS5B01G256800 chr5B 73.742 1192 209 62 1240 2357 439269097 439270258 6.360000e-99 372.0
11 TraesCS5B01G256800 chr5B 73.969 1018 180 46 1229 2184 531637154 531636160 3.000000e-87 333.0
12 TraesCS5B01G256800 chr5B 84.709 327 30 8 4326 4638 531635430 531635110 5.060000e-80 309.0
13 TraesCS5B01G256800 chr5B 87.742 155 14 4 3953 4103 531626285 531626132 5.350000e-40 176.0
14 TraesCS5B01G256800 chr5B 80.296 203 20 11 1006 1204 531627615 531627429 9.080000e-28 135.0
15 TraesCS5B01G256800 chr5B 83.871 155 6 5 701 855 531627990 531627855 4.220000e-26 130.0
16 TraesCS5B01G256800 chr5D 94.514 2005 85 11 1047 3035 370087069 370089064 0.000000e+00 3070.0
17 TraesCS5B01G256800 chr5D 87.408 1628 150 25 2366 3952 437566172 437564559 0.000000e+00 1820.0
18 TraesCS5B01G256800 chr5D 86.135 1529 153 31 2732 4221 437634111 437632603 0.000000e+00 1594.0
19 TraesCS5B01G256800 chr5D 81.955 1657 224 46 2455 4098 420188650 420190244 0.000000e+00 1334.0
20 TraesCS5B01G256800 chr5D 87.337 1074 85 26 1 1053 370084716 370085759 0.000000e+00 1182.0
21 TraesCS5B01G256800 chr5D 80.129 1550 234 37 2366 3868 437643346 437644868 0.000000e+00 1088.0
22 TraesCS5B01G256800 chr5D 80.696 1523 179 61 913 2373 420186858 420188327 0.000000e+00 1077.0
23 TraesCS5B01G256800 chr5D 92.277 764 32 7 4456 5199 370107273 370108029 0.000000e+00 1059.0
24 TraesCS5B01G256800 chr5D 79.675 1417 188 59 1006 2373 437641879 437643244 0.000000e+00 929.0
25 TraesCS5B01G256800 chr5D 91.704 675 21 8 3474 4143 370089512 370090156 0.000000e+00 904.0
26 TraesCS5B01G256800 chr5D 79.031 1197 170 46 1220 2367 437811040 437809876 0.000000e+00 745.0
27 TraesCS5B01G256800 chr5D 79.890 1089 109 47 871 1890 437567745 437566698 0.000000e+00 697.0
28 TraesCS5B01G256800 chr5D 87.066 518 55 5 4684 5199 437617868 437617361 4.520000e-160 575.0
29 TraesCS5B01G256800 chr5D 86.180 521 57 8 4683 5199 437563514 437563005 2.740000e-152 549.0
30 TraesCS5B01G256800 chr5D 86.797 409 35 10 1980 2373 437566678 437566274 6.180000e-119 438.0
31 TraesCS5B01G256800 chr5D 90.850 306 25 3 4291 4593 437563964 437563659 1.740000e-109 407.0
32 TraesCS5B01G256800 chr5D 87.462 327 22 7 4326 4638 437618186 437617865 4.950000e-95 359.0
33 TraesCS5B01G256800 chr5D 93.711 159 8 1 4136 4292 370106872 370107030 2.420000e-58 237.0
34 TraesCS5B01G256800 chr5D 91.304 138 7 2 4289 4425 370107141 370107274 3.200000e-42 183.0
35 TraesCS5B01G256800 chr5D 79.556 225 25 6 637 859 420186558 420186763 1.950000e-29 141.0
36 TraesCS5B01G256800 chr5D 82.390 159 15 7 701 859 437567982 437567837 5.470000e-25 126.0
37 TraesCS5B01G256800 chr6B 86.347 1626 143 28 2366 3952 607135782 607134197 0.000000e+00 1700.0
38 TraesCS5B01G256800 chr6B 88.038 1463 133 21 2366 3801 608187891 608186444 0.000000e+00 1694.0
39 TraesCS5B01G256800 chr6B 80.730 1069 98 51 891 1890 608189446 608188417 0.000000e+00 734.0
40 TraesCS5B01G256800 chr6B 80.425 1083 102 50 871 1890 607137343 607136308 0.000000e+00 725.0
41 TraesCS5B01G256800 chr6B 87.259 518 54 4 4683 5199 608185009 608184503 9.700000e-162 580.0
42 TraesCS5B01G256800 chr6B 89.310 449 43 3 4752 5199 607133134 607132690 4.550000e-155 558.0
43 TraesCS5B01G256800 chr6B 87.559 426 49 2 4775 5199 608367194 608366772 1.680000e-134 490.0
44 TraesCS5B01G256800 chr6B 87.042 409 34 11 1980 2373 607136288 607135884 1.330000e-120 444.0
45 TraesCS5B01G256800 chr6B 86.797 409 35 11 1980 2373 608188397 608187993 6.180000e-119 438.0
46 TraesCS5B01G256800 chr6B 90.461 304 22 5 4291 4593 607133622 607133325 1.360000e-105 394.0
47 TraesCS5B01G256800 chr6B 90.099 303 23 5 4291 4593 608185782 608185487 2.270000e-103 387.0
48 TraesCS5B01G256800 chr6B 88.387 155 13 4 3953 4103 607135877 607135724 1.150000e-41 182.0
49 TraesCS5B01G256800 chr6B 88.387 155 13 4 3953 4103 608187986 608187833 1.150000e-41 182.0
50 TraesCS5B01G256800 chr6B 79.675 246 31 12 207 436 145560733 145560491 5.390000e-35 159.0
51 TraesCS5B01G256800 chr6B 82.090 134 15 6 205 334 515065666 515065538 7.120000e-19 106.0
52 TraesCS5B01G256800 chr6B 91.045 67 6 0 782 848 608189625 608189559 1.990000e-14 91.6
53 TraesCS5B01G256800 chr6B 97.619 42 1 0 701 742 608189698 608189657 7.220000e-09 73.1
54 TraesCS5B01G256800 chr5A 86.737 1523 139 29 2455 3952 552633768 552632284 0.000000e+00 1635.0
55 TraesCS5B01G256800 chr5A 87.862 1244 125 15 2728 3963 552646329 552645104 0.000000e+00 1437.0
56 TraesCS5B01G256800 chr5A 80.706 1529 169 71 913 2373 533830097 533831567 0.000000e+00 1074.0
57 TraesCS5B01G256800 chr5A 81.018 1159 149 36 2366 3487 552650428 552651552 0.000000e+00 856.0
58 TraesCS5B01G256800 chr5A 81.115 1022 141 31 3084 4098 533832370 533833346 0.000000e+00 771.0
59 TraesCS5B01G256800 chr5A 81.630 871 114 22 1378 2234 552649421 552650259 0.000000e+00 680.0
60 TraesCS5B01G256800 chr5A 84.339 696 66 15 1220 1890 552635130 552634453 4.390000e-180 641.0
61 TraesCS5B01G256800 chr5A 87.500 440 47 7 2455 2889 533831895 533832331 7.770000e-138 501.0
62 TraesCS5B01G256800 chr5A 88.251 366 42 1 4835 5199 552644111 552643746 2.220000e-118 436.0
63 TraesCS5B01G256800 chr5A 90.429 303 23 4 4291 4593 552631691 552631395 1.360000e-105 394.0
64 TraesCS5B01G256800 chr5A 74.634 1025 178 37 1220 2184 552646349 552645347 1.370000e-100 377.0
65 TraesCS5B01G256800 chr5A 85.933 327 27 7 4326 4638 552644510 552644189 1.080000e-86 331.0
66 TraesCS5B01G256800 chr5A 78.451 297 37 15 871 1145 552635593 552635302 8.950000e-38 169.0
67 TraesCS5B01G256800 chr5A 87.943 141 12 4 3953 4089 552634013 552633874 1.500000e-35 161.0
68 TraesCS5B01G256800 chr5A 81.726 197 25 5 3952 4137 552651898 552652094 2.510000e-33 154.0
69 TraesCS5B01G256800 chr5A 82.500 160 12 8 701 859 552635820 552635676 5.470000e-25 126.0
70 TraesCS5B01G256800 chr5A 82.353 153 7 5 708 859 533829870 533830003 1.180000e-21 115.0
71 TraesCS5B01G256800 chr3D 88.660 291 20 7 3836 4120 406691527 406691244 4.990000e-90 342.0
72 TraesCS5B01G256800 chr3D 80.342 234 36 8 213 439 49042155 49042385 8.950000e-38 169.0
73 TraesCS5B01G256800 chr1D 81.116 233 32 11 214 440 303525239 303525465 5.350000e-40 176.0
74 TraesCS5B01G256800 chr1D 81.679 131 17 5 207 335 203454024 203454149 9.210000e-18 102.0
75 TraesCS5B01G256800 chr3A 79.828 233 38 6 213 439 61534901 61535130 1.500000e-35 161.0
76 TraesCS5B01G256800 chr6D 79.253 241 34 11 210 436 71024802 71024564 2.510000e-33 154.0
77 TraesCS5B01G256800 chr6D 81.538 130 18 6 206 330 81590632 81590760 9.210000e-18 102.0
78 TraesCS5B01G256800 chr2B 81.935 155 20 6 282 429 21918911 21919064 1.970000e-24 124.0
79 TraesCS5B01G256800 chr7A 78.571 182 31 5 208 382 175873048 175872868 4.250000e-21 113.0
80 TraesCS5B01G256800 chr7B 77.419 186 33 9 232 411 667762646 667762828 9.210000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G256800 chr5B 439266370 439271568 5198 False 4986.500000 9601 86.871000 1 5199 2 chr5B.!!$F2 5198
1 TraesCS5B01G256800 chr5B 531706326 531707488 1162 True 749.000000 749 79.097000 1220 2367 1 chr5B.!!$R1 1147
2 TraesCS5B01G256800 chr5B 531640808 531641970 1162 False 737.000000 737 78.930000 1220 2367 1 chr5B.!!$F1 1147
3 TraesCS5B01G256800 chr5B 531634607 531637154 2547 True 697.750000 1607 82.527500 1229 5199 4 chr5B.!!$R3 3970
4 TraesCS5B01G256800 chr5B 531621200 531627990 6790 True 528.375000 1711 86.381375 701 5199 8 chr5B.!!$R2 4498
5 TraesCS5B01G256800 chr5D 370084716 370090156 5440 False 1718.666667 3070 91.185000 1 4143 3 chr5D.!!$F1 4142
6 TraesCS5B01G256800 chr5D 437632603 437634111 1508 True 1594.000000 1594 86.135000 2732 4221 1 chr5D.!!$R1 1489
7 TraesCS5B01G256800 chr5D 437641879 437644868 2989 False 1008.500000 1088 79.902000 1006 3868 2 chr5D.!!$F4 2862
8 TraesCS5B01G256800 chr5D 420186558 420190244 3686 False 850.666667 1334 80.735667 637 4098 3 chr5D.!!$F3 3461
9 TraesCS5B01G256800 chr5D 437809876 437811040 1164 True 745.000000 745 79.031000 1220 2367 1 chr5D.!!$R2 1147
10 TraesCS5B01G256800 chr5D 437563005 437567982 4977 True 672.833333 1820 85.585833 701 5199 6 chr5D.!!$R3 4498
11 TraesCS5B01G256800 chr5D 370106872 370108029 1157 False 493.000000 1059 92.430667 4136 5199 3 chr5D.!!$F2 1063
12 TraesCS5B01G256800 chr5D 437617361 437618186 825 True 467.000000 575 87.264000 4326 5199 2 chr5D.!!$R4 873
13 TraesCS5B01G256800 chr6B 607132690 607137343 4653 True 667.166667 1700 86.995333 871 5199 6 chr6B.!!$R4 4328
14 TraesCS5B01G256800 chr6B 608184503 608189698 5195 True 522.462500 1694 88.746750 701 5199 8 chr6B.!!$R5 4498
15 TraesCS5B01G256800 chr5A 552643746 552646349 2603 True 645.250000 1437 84.170000 1220 5199 4 chr5A.!!$R2 3979
16 TraesCS5B01G256800 chr5A 533829870 533833346 3476 False 615.250000 1074 82.918500 708 4098 4 chr5A.!!$F1 3390
17 TraesCS5B01G256800 chr5A 552649421 552652094 2673 False 563.333333 856 81.458000 1378 4137 3 chr5A.!!$F2 2759
18 TraesCS5B01G256800 chr5A 552631395 552635820 4425 True 521.000000 1635 85.066500 701 4593 6 chr5A.!!$R1 3892

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
689 715 0.035056 CCCAAGAAACCGATCCTGCT 60.035 55.0 0.00 0.00 0.00 4.24 F
1565 3186 0.169672 GCTTGTATGTGCTGCACCTG 59.830 55.0 28.17 13.16 32.73 4.00 F
3296 7120 0.310854 GGCGCTATTTTGATTCGGGG 59.689 55.0 7.64 0.00 0.00 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2220 3850 0.034283 TGGCACAATAGGATGCAGCA 60.034 50.0 3.51 0.00 43.93 4.41 R
3312 7136 0.032815 GAGGCAAGATCTACTCCGCC 59.967 60.0 0.00 3.81 43.31 6.13 R
4971 11542 0.035458 AGCAAGCGAGTAGGCACTTT 59.965 50.0 0.00 0.00 41.75 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 6.649141 TGACGCTAATATTGCCCAAGTATTAG 59.351 38.462 0.00 16.02 39.60 1.73
100 101 6.992123 TCTGTCACCGCTAATGAAATATTGAT 59.008 34.615 0.00 0.00 0.00 2.57
118 119 4.853468 TGATGTATGGGGTGTTGTATGT 57.147 40.909 0.00 0.00 0.00 2.29
176 177 9.421399 GGAAAGGATATCTTCCCATTTTCTTTA 57.579 33.333 11.15 0.00 46.81 1.85
227 228 7.886629 ATTACTCAAATGATAAGTGCCACAT 57.113 32.000 0.00 0.00 0.00 3.21
254 255 2.830370 GAAGCAATCCGGCCCTGG 60.830 66.667 0.00 0.00 0.00 4.45
346 352 5.528870 GTTGCCATGCTTAACAACTAAAGT 58.471 37.500 8.72 0.00 39.39 2.66
361 367 3.834231 ACTAAAGTTGCCATCCTTGCATT 59.166 39.130 0.00 0.00 38.76 3.56
362 368 5.016173 ACTAAAGTTGCCATCCTTGCATTA 58.984 37.500 0.00 0.00 38.76 1.90
363 369 5.658190 ACTAAAGTTGCCATCCTTGCATTAT 59.342 36.000 0.00 0.00 38.76 1.28
374 380 5.991933 TCCTTGCATTATTAAACTTGCCA 57.008 34.783 0.00 0.00 34.20 4.92
377 383 6.154192 TCCTTGCATTATTAAACTTGCCATCA 59.846 34.615 0.00 0.00 34.20 3.07
382 388 8.502387 TGCATTATTAAACTTGCCATCAAAAAC 58.498 29.630 4.92 0.00 34.20 2.43
383 389 8.502387 GCATTATTAAACTTGCCATCAAAAACA 58.498 29.630 0.00 0.00 0.00 2.83
389 395 6.998968 AACTTGCCATCAAAAACATTCAAA 57.001 29.167 0.00 0.00 0.00 2.69
390 396 6.607735 ACTTGCCATCAAAAACATTCAAAG 57.392 33.333 0.00 0.00 0.00 2.77
391 397 6.114767 ACTTGCCATCAAAAACATTCAAAGT 58.885 32.000 0.00 0.00 0.00 2.66
395 401 5.433855 CCATCAAAAACATTCAAAGTTGCG 58.566 37.500 0.00 0.00 0.00 4.85
429 436 4.214986 ACATGTGTGACATTTATCGGGA 57.785 40.909 0.00 0.00 36.53 5.14
463 470 5.757099 AGTCTAGCCTGGCTACTTTTTAA 57.243 39.130 24.10 3.75 40.44 1.52
500 507 5.001232 CGGACAAGGAATAAAAAGGAGTCA 58.999 41.667 0.00 0.00 0.00 3.41
529 536 2.508439 CGACGAATGACCGTGGGG 60.508 66.667 0.00 0.00 43.49 4.96
532 539 2.511600 CGAATGACCGTGGGGCTC 60.512 66.667 0.00 0.00 36.48 4.70
563 579 7.283329 CCTAATTCATCTACCAAAGCCTACTT 58.717 38.462 0.00 0.00 37.90 2.24
564 580 7.442666 CCTAATTCATCTACCAAAGCCTACTTC 59.557 40.741 0.00 0.00 34.05 3.01
565 581 4.386867 TCATCTACCAAAGCCTACTTCG 57.613 45.455 0.00 0.00 34.05 3.79
566 582 4.021229 TCATCTACCAAAGCCTACTTCGA 58.979 43.478 0.00 0.00 34.05 3.71
570 595 1.968493 ACCAAAGCCTACTTCGACTCA 59.032 47.619 0.00 0.00 34.05 3.41
660 686 1.448540 GGGACGTGACAGCATCCTG 60.449 63.158 0.00 0.00 44.80 3.86
673 699 1.229951 ATCCTGCTCCACTTCCCCA 60.230 57.895 0.00 0.00 0.00 4.96
689 715 0.035056 CCCAAGAAACCGATCCTGCT 60.035 55.000 0.00 0.00 0.00 4.24
690 716 1.089920 CCAAGAAACCGATCCTGCTG 58.910 55.000 0.00 0.00 0.00 4.41
691 717 1.089920 CAAGAAACCGATCCTGCTGG 58.910 55.000 2.58 2.58 0.00 4.85
693 719 0.539051 AGAAACCGATCCTGCTGGAG 59.461 55.000 18.00 7.11 46.91 3.86
776 816 8.590719 GCTTGTTTCCAAGGTACTATATACTC 57.409 38.462 4.76 0.00 46.72 2.59
777 817 7.656542 GCTTGTTTCCAAGGTACTATATACTCC 59.343 40.741 4.76 0.00 46.72 3.85
778 818 7.281040 TGTTTCCAAGGTACTATATACTCCG 57.719 40.000 0.00 0.00 38.49 4.63
779 819 6.835488 TGTTTCCAAGGTACTATATACTCCGT 59.165 38.462 0.00 0.00 38.49 4.69
780 820 7.998383 TGTTTCCAAGGTACTATATACTCCGTA 59.002 37.037 0.00 0.00 38.49 4.02
863 904 9.717942 TCAAAATCTTTCTTTCTTGGTTTTTGA 57.282 25.926 0.00 0.00 37.88 2.69
882 1004 8.630037 GTTTTTGATCTAAAAGTTTCCTCCTCA 58.370 33.333 14.16 0.00 39.29 3.86
887 1009 5.967088 TCTAAAAGTTTCCTCCTCAGATCG 58.033 41.667 0.00 0.00 0.00 3.69
888 1010 2.682155 AAGTTTCCTCCTCAGATCGC 57.318 50.000 0.00 0.00 0.00 4.58
897 1022 4.218635 TCCTCCTCAGATCGCATATTGTAC 59.781 45.833 0.00 0.00 0.00 2.90
907 1032 4.790878 TCGCATATTGTACACGGATAGTC 58.209 43.478 0.00 0.00 0.00 2.59
1122 2604 8.773645 TGCAAGTGCATATTTACACTCATATAC 58.226 33.333 0.82 0.00 46.17 1.47
1286 2899 1.661821 GAGTGTCGTGTCGCTTGCT 60.662 57.895 0.00 0.00 0.00 3.91
1289 2902 1.227118 TGTCGTGTCGCTTGCTTCA 60.227 52.632 0.00 0.00 0.00 3.02
1294 2907 1.069973 CGTGTCGCTTGCTTCATTTGA 60.070 47.619 0.00 0.00 0.00 2.69
1303 2916 4.321899 GCTTGCTTCATTTGATGGTTGGTA 60.322 41.667 0.00 0.00 0.00 3.25
1310 2923 9.463443 GCTTCATTTGATGGTTGGTAATTATAC 57.537 33.333 0.00 0.00 0.00 1.47
1375 2988 3.675467 GACCAAATATTCGGTCTGCAC 57.325 47.619 16.92 0.00 46.83 4.57
1376 2989 2.006888 ACCAAATATTCGGTCTGCACG 58.993 47.619 0.00 0.00 0.00 5.34
1377 2990 2.006888 CCAAATATTCGGTCTGCACGT 58.993 47.619 0.00 0.00 0.00 4.49
1378 2991 2.223021 CCAAATATTCGGTCTGCACGTG 60.223 50.000 12.28 12.28 0.00 4.49
1379 2992 2.380084 AATATTCGGTCTGCACGTGT 57.620 45.000 18.38 0.00 0.00 4.49
1380 2993 1.640428 ATATTCGGTCTGCACGTGTG 58.360 50.000 18.38 10.72 0.00 3.82
1402 3015 3.111098 CGTAGGTGATACCAAGTTACGC 58.889 50.000 0.28 0.00 41.95 4.42
1432 3045 3.382227 CAGGCATATGCATTGAAACCTCA 59.618 43.478 28.07 0.00 44.36 3.86
1433 3046 3.635373 AGGCATATGCATTGAAACCTCAG 59.365 43.478 28.07 0.00 44.36 3.35
1434 3047 3.378339 GCATATGCATTGAAACCTCAGC 58.622 45.455 22.84 0.00 41.59 4.26
1436 3049 4.792057 GCATATGCATTGAAACCTCAGCTC 60.792 45.833 22.84 0.00 41.59 4.09
1440 3053 2.877300 GCATTGAAACCTCAGCTCCTGA 60.877 50.000 0.00 0.00 38.25 3.86
1444 3057 2.909006 TGAAACCTCAGCTCCTGATTCT 59.091 45.455 0.00 0.00 39.92 2.40
1453 3066 3.102972 AGCTCCTGATTCTGAAGCTACA 58.897 45.455 2.43 0.00 0.00 2.74
1459 3072 5.899547 TCCTGATTCTGAAGCTACAATCCTA 59.100 40.000 7.22 0.00 0.00 2.94
1465 3078 5.918608 TCTGAAGCTACAATCCTAACATCC 58.081 41.667 0.00 0.00 0.00 3.51
1466 3079 5.425217 TCTGAAGCTACAATCCTAACATCCA 59.575 40.000 0.00 0.00 0.00 3.41
1467 3080 5.674525 TGAAGCTACAATCCTAACATCCAG 58.325 41.667 0.00 0.00 0.00 3.86
1468 3081 5.425217 TGAAGCTACAATCCTAACATCCAGA 59.575 40.000 0.00 0.00 0.00 3.86
1470 3083 4.716784 AGCTACAATCCTAACATCCAGACA 59.283 41.667 0.00 0.00 0.00 3.41
1475 3088 5.013079 ACAATCCTAACATCCAGACAGTTGA 59.987 40.000 0.00 0.00 0.00 3.18
1483 3096 2.054021 TCCAGACAGTTGATTCCACCA 58.946 47.619 0.00 0.00 0.00 4.17
1503 3116 0.746659 ACTTGGCCTGCAAGTTTGAC 59.253 50.000 3.32 0.00 39.60 3.18
1507 3120 0.887387 GGCCTGCAAGTTTGACGGTA 60.887 55.000 0.00 0.00 0.00 4.02
1508 3121 0.517316 GCCTGCAAGTTTGACGGTAG 59.483 55.000 0.00 0.00 0.00 3.18
1510 3123 1.512926 CTGCAAGTTTGACGGTAGCT 58.487 50.000 0.00 0.00 0.00 3.32
1515 3128 3.729217 GCAAGTTTGACGGTAGCTTTTTC 59.271 43.478 0.00 0.00 0.00 2.29
1517 3130 5.205565 CAAGTTTGACGGTAGCTTTTTCTC 58.794 41.667 0.00 0.00 0.00 2.87
1521 3134 4.602340 TGACGGTAGCTTTTTCTCTCTT 57.398 40.909 0.00 0.00 0.00 2.85
1530 3143 5.934781 AGCTTTTTCTCTCTTCTCCTTTCA 58.065 37.500 0.00 0.00 0.00 2.69
1536 3149 7.739995 TTTCTCTCTTCTCCTTTCATGGATA 57.260 36.000 0.00 0.00 35.30 2.59
1564 3185 0.250858 TGCTTGTATGTGCTGCACCT 60.251 50.000 28.17 21.38 32.73 4.00
1565 3186 0.169672 GCTTGTATGTGCTGCACCTG 59.830 55.000 28.17 13.16 32.73 4.00
1566 3187 1.527034 CTTGTATGTGCTGCACCTGT 58.473 50.000 28.17 16.93 32.73 4.00
1567 3188 2.698803 CTTGTATGTGCTGCACCTGTA 58.301 47.619 28.17 15.99 32.73 2.74
1568 3189 2.849294 TGTATGTGCTGCACCTGTAA 57.151 45.000 28.17 11.12 32.73 2.41
1569 3190 3.348647 TGTATGTGCTGCACCTGTAAT 57.651 42.857 28.17 17.21 32.73 1.89
1570 3191 3.270027 TGTATGTGCTGCACCTGTAATC 58.730 45.455 28.17 12.61 32.73 1.75
1571 3192 2.495155 ATGTGCTGCACCTGTAATCA 57.505 45.000 28.17 8.95 32.73 2.57
1572 3193 2.495155 TGTGCTGCACCTGTAATCAT 57.505 45.000 28.17 0.00 32.73 2.45
1573 3194 2.794103 TGTGCTGCACCTGTAATCATT 58.206 42.857 28.17 0.00 32.73 2.57
1574 3195 3.949132 TGTGCTGCACCTGTAATCATTA 58.051 40.909 28.17 3.67 32.73 1.90
1575 3196 4.331108 TGTGCTGCACCTGTAATCATTAA 58.669 39.130 28.17 3.46 32.73 1.40
1576 3197 4.949238 TGTGCTGCACCTGTAATCATTAAT 59.051 37.500 28.17 0.00 32.73 1.40
1577 3198 5.418524 TGTGCTGCACCTGTAATCATTAATT 59.581 36.000 28.17 0.00 32.73 1.40
1578 3199 5.973565 GTGCTGCACCTGTAATCATTAATTC 59.026 40.000 21.78 0.00 0.00 2.17
1579 3200 5.651576 TGCTGCACCTGTAATCATTAATTCA 59.348 36.000 0.00 0.00 0.00 2.57
1580 3201 5.973565 GCTGCACCTGTAATCATTAATTCAC 59.026 40.000 0.00 0.00 0.00 3.18
1581 3202 6.449635 TGCACCTGTAATCATTAATTCACC 57.550 37.500 0.00 0.00 0.00 4.02
1582 3203 5.948758 TGCACCTGTAATCATTAATTCACCA 59.051 36.000 0.00 0.00 0.00 4.17
1590 3211 4.880886 TCATTAATTCACCATGTGCTCG 57.119 40.909 0.00 0.00 32.98 5.03
1593 3214 4.678509 TTAATTCACCATGTGCTCGTTC 57.321 40.909 0.00 0.00 32.98 3.95
1605 3226 5.142061 TGTGCTCGTTCCAGATTAAAGTA 57.858 39.130 0.00 0.00 0.00 2.24
1612 3233 4.390909 CGTTCCAGATTAAAGTACGCCTTT 59.609 41.667 6.03 6.03 45.36 3.11
1614 3235 4.178540 TCCAGATTAAAGTACGCCTTTCG 58.821 43.478 4.14 0.00 42.44 3.46
1618 3239 6.477688 CCAGATTAAAGTACGCCTTTCGAATA 59.522 38.462 0.00 0.00 42.44 1.75
1642 3263 1.541233 GGATTGTCACTGGGCGGATAG 60.541 57.143 0.00 0.00 0.00 2.08
1643 3264 1.412710 GATTGTCACTGGGCGGATAGA 59.587 52.381 0.00 0.00 0.00 1.98
1644 3265 0.824109 TTGTCACTGGGCGGATAGAG 59.176 55.000 0.00 0.00 0.00 2.43
1646 3267 0.755698 GTCACTGGGCGGATAGAGGA 60.756 60.000 0.00 0.00 0.00 3.71
1648 3269 0.605589 CACTGGGCGGATAGAGGATC 59.394 60.000 0.00 0.00 0.00 3.36
1667 3288 5.492524 AGGATCCCGGGATATATGTTGATTT 59.507 40.000 36.04 10.41 34.60 2.17
1699 3320 3.623906 ACATCAGGAATGTGTCTGGAG 57.376 47.619 0.00 0.00 47.00 3.86
1706 3327 3.328931 AGGAATGTGTCTGGAGTTGATGT 59.671 43.478 0.00 0.00 0.00 3.06
1713 3334 1.344438 TCTGGAGTTGATGTCGCAAGT 59.656 47.619 0.00 0.00 39.48 3.16
1719 3340 3.668447 AGTTGATGTCGCAAGTCTTGAT 58.332 40.909 16.99 0.40 39.48 2.57
1754 3375 3.014304 TGAGCCTCATACGAAGGTAGT 57.986 47.619 0.00 0.00 30.81 2.73
1763 3384 6.348622 CCTCATACGAAGGTAGTAGCTGTATG 60.349 46.154 22.18 22.18 35.59 2.39
1764 3385 5.472478 TCATACGAAGGTAGTAGCTGTATGG 59.528 44.000 24.94 14.74 35.28 2.74
1774 3395 0.321564 AGCTGTATGGCGCTGTTTCA 60.322 50.000 7.64 0.00 34.69 2.69
1775 3396 0.521291 GCTGTATGGCGCTGTTTCAA 59.479 50.000 7.64 0.00 0.00 2.69
1779 3400 2.816672 TGTATGGCGCTGTTTCAATTCA 59.183 40.909 7.64 0.00 0.00 2.57
1783 3404 1.401539 GGCGCTGTTTCAATTCAGGAC 60.402 52.381 7.64 0.00 32.94 3.85
1786 3407 3.814945 CGCTGTTTCAATTCAGGACTTC 58.185 45.455 0.00 0.00 32.94 3.01
1790 3411 6.293407 CGCTGTTTCAATTCAGGACTTCTAAA 60.293 38.462 0.00 0.00 32.94 1.85
1792 3413 7.255277 GCTGTTTCAATTCAGGACTTCTAAAGT 60.255 37.037 0.00 0.00 37.01 2.66
1816 3437 2.649816 ACAAGGGGACTAAATCTTGCCT 59.350 45.455 0.00 0.00 42.68 4.75
1823 3444 4.195416 GGACTAAATCTTGCCTCTCCAAG 58.805 47.826 0.00 0.00 42.73 3.61
1826 3447 0.998145 AATCTTGCCTCTCCAAGCCT 59.002 50.000 0.00 0.00 41.47 4.58
1830 3451 1.556911 CTTGCCTCTCCAAGCCTTCTA 59.443 52.381 0.00 0.00 36.18 2.10
1834 3455 1.134670 CCTCTCCAAGCCTTCTAACCG 60.135 57.143 0.00 0.00 0.00 4.44
1839 3460 1.676014 CCAAGCCTTCTAACCGGTGAG 60.676 57.143 13.46 13.46 0.00 3.51
1845 3466 3.522553 CCTTCTAACCGGTGAGACAATC 58.477 50.000 22.16 0.00 0.00 2.67
1865 3486 3.709880 TAAGCACGTGCCGGATCCG 62.710 63.158 35.51 27.65 43.38 4.18
1892 3518 2.872245 TGAGCTGCTTTGTACAGTTCAC 59.128 45.455 2.53 0.00 46.32 3.18
1926 3556 7.340232 ACTGTATGATTGTGTCAATGGCTTAAT 59.660 33.333 0.00 0.00 40.97 1.40
1929 3559 7.886629 ATGATTGTGTCAATGGCTTAATAGT 57.113 32.000 0.00 0.00 40.97 2.12
1951 3581 7.596749 AGTATATTTCTACCATTGTATGCGC 57.403 36.000 0.00 0.00 0.00 6.09
1952 3582 7.158697 AGTATATTTCTACCATTGTATGCGCA 58.841 34.615 14.96 14.96 0.00 6.09
1968 3598 4.137116 TGCGCATATCCTTAGTTTCAGT 57.863 40.909 5.66 0.00 0.00 3.41
1971 3601 4.210120 GCGCATATCCTTAGTTTCAGTCAG 59.790 45.833 0.30 0.00 0.00 3.51
2002 3632 6.882610 TGCATTTTCTCTGTGTAACTTCAT 57.117 33.333 0.00 0.00 38.04 2.57
2006 3636 7.324616 GCATTTTCTCTGTGTAACTTCATTGTC 59.675 37.037 0.00 0.00 38.04 3.18
2016 3646 2.731217 ACTTCATTGTCACTTTTGCGC 58.269 42.857 0.00 0.00 0.00 6.09
2034 3664 1.453669 CTAGGCAGGGATTGGAGGC 59.546 63.158 0.00 0.00 0.00 4.70
2055 3685 2.355007 CCCCCTTGTTGATTTTGATGGC 60.355 50.000 0.00 0.00 0.00 4.40
2057 3687 3.244491 CCCCTTGTTGATTTTGATGGCAA 60.244 43.478 0.00 0.00 0.00 4.52
2079 3709 3.395941 ACTTTGTTGGGATGAACTCCTCT 59.604 43.478 0.00 0.00 44.28 3.69
2092 3722 3.611766 ACTCCTCTCGTACCAAAATGG 57.388 47.619 0.00 0.00 45.02 3.16
2107 3737 4.475944 CAAAATGGAAAAGACTGCCTACG 58.524 43.478 0.00 0.00 0.00 3.51
2111 3741 0.438830 GAAAAGACTGCCTACGTGCG 59.561 55.000 0.00 0.00 0.00 5.34
2116 3746 2.509336 CTGCCTACGTGCGAAGGG 60.509 66.667 0.00 0.00 33.17 3.95
2120 3750 2.579787 CTACGTGCGAAGGGAGCG 60.580 66.667 0.00 0.00 37.44 5.03
2145 3775 8.320451 GAATTCTTCGATTCTTGTTGCATAAG 57.680 34.615 0.00 5.17 34.07 1.73
2146 3776 5.801350 TCTTCGATTCTTGTTGCATAAGG 57.199 39.130 10.31 0.00 0.00 2.69
2162 3792 0.846693 AAGGGGATGGTCAGGTATGC 59.153 55.000 0.00 0.00 0.00 3.14
2170 3800 3.222173 TGGTCAGGTATGCACACTTTT 57.778 42.857 0.00 0.00 0.00 2.27
2171 3801 3.561143 TGGTCAGGTATGCACACTTTTT 58.439 40.909 0.00 0.00 0.00 1.94
2184 3814 6.804677 TGCACACTTTTTGTATTGATGAACT 58.195 32.000 0.00 0.00 35.67 3.01
2186 3816 6.346040 GCACACTTTTTGTATTGATGAACTGC 60.346 38.462 0.00 0.00 35.67 4.40
2192 3822 3.620488 TGTATTGATGAACTGCCCTTCC 58.380 45.455 0.00 0.00 0.00 3.46
2203 3833 1.077445 GCCCTTCCCTCTTTGGCTT 59.923 57.895 0.00 0.00 39.05 4.35
2211 3841 1.005924 CCCTCTTTGGCTTACCCATGT 59.994 52.381 0.00 0.00 44.89 3.21
2212 3842 2.094675 CCTCTTTGGCTTACCCATGTG 58.905 52.381 0.00 0.00 44.89 3.21
2213 3843 2.555227 CCTCTTTGGCTTACCCATGTGT 60.555 50.000 0.00 0.00 44.89 3.72
2220 3850 2.237392 GGCTTACCCATGTGTCTCTCTT 59.763 50.000 0.00 0.00 0.00 2.85
2221 3851 3.265791 GCTTACCCATGTGTCTCTCTTG 58.734 50.000 0.00 0.00 0.00 3.02
2222 3852 3.265791 CTTACCCATGTGTCTCTCTTGC 58.734 50.000 0.00 0.00 0.00 4.01
2234 3864 3.808726 GTCTCTCTTGCTGCATCCTATTG 59.191 47.826 1.84 0.00 0.00 1.90
2236 3866 3.538591 TCTCTTGCTGCATCCTATTGTG 58.461 45.455 1.84 0.00 0.00 3.33
2237 3867 2.019249 TCTTGCTGCATCCTATTGTGC 58.981 47.619 1.84 0.00 41.61 4.57
2240 3870 0.383231 GCTGCATCCTATTGTGCCAC 59.617 55.000 0.00 0.00 40.56 5.01
2243 3873 3.479489 CTGCATCCTATTGTGCCACATA 58.521 45.455 0.00 0.00 40.56 2.29
2244 3874 3.213506 TGCATCCTATTGTGCCACATAC 58.786 45.455 0.00 0.00 40.56 2.39
2249 3879 3.716353 TCCTATTGTGCCACATACATCCT 59.284 43.478 0.00 0.00 0.00 3.24
2252 3882 3.719268 TTGTGCCACATACATCCTTCT 57.281 42.857 0.00 0.00 0.00 2.85
2253 3883 4.835284 TTGTGCCACATACATCCTTCTA 57.165 40.909 0.00 0.00 0.00 2.10
2254 3884 5.372343 TTGTGCCACATACATCCTTCTAT 57.628 39.130 0.00 0.00 0.00 1.98
2260 3890 8.850156 GTGCCACATACATCCTTCTATTTTTAT 58.150 33.333 0.00 0.00 0.00 1.40
2275 3905 8.500837 TCTATTTTTATTTGAGTTTGTGTGCG 57.499 30.769 0.00 0.00 0.00 5.34
2276 3906 8.346300 TCTATTTTTATTTGAGTTTGTGTGCGA 58.654 29.630 0.00 0.00 0.00 5.10
2277 3907 6.804534 TTTTTATTTGAGTTTGTGTGCGAG 57.195 33.333 0.00 0.00 0.00 5.03
2278 3908 2.405892 ATTTGAGTTTGTGTGCGAGC 57.594 45.000 0.00 0.00 0.00 5.03
2279 3909 1.378531 TTTGAGTTTGTGTGCGAGCT 58.621 45.000 0.00 0.00 0.00 4.09
2280 3910 0.657312 TTGAGTTTGTGTGCGAGCTG 59.343 50.000 0.00 0.00 0.00 4.24
2281 3911 0.461870 TGAGTTTGTGTGCGAGCTGT 60.462 50.000 0.00 0.00 0.00 4.40
2282 3912 1.202475 TGAGTTTGTGTGCGAGCTGTA 60.202 47.619 0.00 0.00 0.00 2.74
2283 3913 2.069273 GAGTTTGTGTGCGAGCTGTAT 58.931 47.619 0.00 0.00 0.00 2.29
2284 3914 2.069273 AGTTTGTGTGCGAGCTGTATC 58.931 47.619 0.00 0.00 0.00 2.24
2285 3915 1.798223 GTTTGTGTGCGAGCTGTATCA 59.202 47.619 0.00 0.00 0.00 2.15
2286 3916 2.162319 TTGTGTGCGAGCTGTATCAA 57.838 45.000 0.00 0.00 0.00 2.57
2287 3917 1.428448 TGTGTGCGAGCTGTATCAAC 58.572 50.000 0.00 0.00 0.00 3.18
2288 3918 1.270041 TGTGTGCGAGCTGTATCAACA 60.270 47.619 0.00 0.00 0.00 3.33
2300 3930 5.715429 CTGTATCAACAGCAGCTTCTAAG 57.285 43.478 0.00 0.00 46.28 2.18
2301 3931 4.507710 TGTATCAACAGCAGCTTCTAAGG 58.492 43.478 0.00 0.00 0.00 2.69
2302 3932 3.710209 ATCAACAGCAGCTTCTAAGGT 57.290 42.857 0.00 0.00 37.19 3.50
2303 3933 3.492102 TCAACAGCAGCTTCTAAGGTT 57.508 42.857 0.00 0.00 33.87 3.50
2304 3934 3.820557 TCAACAGCAGCTTCTAAGGTTT 58.179 40.909 0.00 0.00 33.87 3.27
2305 3935 4.968259 TCAACAGCAGCTTCTAAGGTTTA 58.032 39.130 0.00 0.00 33.87 2.01
2306 3936 4.755123 TCAACAGCAGCTTCTAAGGTTTAC 59.245 41.667 0.00 0.00 33.87 2.01
2307 3937 3.326747 ACAGCAGCTTCTAAGGTTTACG 58.673 45.455 0.00 0.00 33.87 3.18
2308 3938 3.006537 ACAGCAGCTTCTAAGGTTTACGA 59.993 43.478 0.00 0.00 33.87 3.43
2309 3939 3.614616 CAGCAGCTTCTAAGGTTTACGAG 59.385 47.826 0.00 0.00 33.87 4.18
2310 3940 3.258622 AGCAGCTTCTAAGGTTTACGAGT 59.741 43.478 0.00 0.00 33.87 4.18
2311 3941 3.995048 GCAGCTTCTAAGGTTTACGAGTT 59.005 43.478 0.00 0.00 33.87 3.01
2312 3942 4.451435 GCAGCTTCTAAGGTTTACGAGTTT 59.549 41.667 0.00 0.00 33.87 2.66
2313 3943 5.636543 GCAGCTTCTAAGGTTTACGAGTTTA 59.363 40.000 0.00 0.00 33.87 2.01
2314 3944 6.313164 GCAGCTTCTAAGGTTTACGAGTTTAT 59.687 38.462 0.00 0.00 33.87 1.40
2315 3945 7.464311 GCAGCTTCTAAGGTTTACGAGTTTATC 60.464 40.741 0.00 0.00 33.87 1.75
2316 3946 7.010275 CAGCTTCTAAGGTTTACGAGTTTATCC 59.990 40.741 0.00 0.00 33.87 2.59
2317 3947 6.257411 GCTTCTAAGGTTTACGAGTTTATCCC 59.743 42.308 0.00 0.00 0.00 3.85
2318 3948 6.855763 TCTAAGGTTTACGAGTTTATCCCA 57.144 37.500 0.00 0.00 0.00 4.37
2319 3949 7.243604 TCTAAGGTTTACGAGTTTATCCCAA 57.756 36.000 0.00 0.00 0.00 4.12
2320 3950 7.678837 TCTAAGGTTTACGAGTTTATCCCAAA 58.321 34.615 0.00 0.00 0.00 3.28
2321 3951 8.156165 TCTAAGGTTTACGAGTTTATCCCAAAA 58.844 33.333 0.00 0.00 0.00 2.44
2322 3952 7.585579 AAGGTTTACGAGTTTATCCCAAAAA 57.414 32.000 0.00 0.00 0.00 1.94
2323 3953 6.973843 AGGTTTACGAGTTTATCCCAAAAAC 58.026 36.000 0.00 0.00 37.14 2.43
2324 3954 6.774170 AGGTTTACGAGTTTATCCCAAAAACT 59.226 34.615 1.08 1.08 46.97 2.66
2325 3955 6.859508 GGTTTACGAGTTTATCCCAAAAACTG 59.140 38.462 5.98 2.48 44.94 3.16
2326 3956 7.420002 GTTTACGAGTTTATCCCAAAAACTGT 58.580 34.615 5.98 7.25 44.94 3.55
2327 3957 5.684550 ACGAGTTTATCCCAAAAACTGTC 57.315 39.130 5.98 0.00 44.94 3.51
2328 3958 4.517832 ACGAGTTTATCCCAAAAACTGTCC 59.482 41.667 5.98 0.00 44.94 4.02
2329 3959 4.082949 CGAGTTTATCCCAAAAACTGTCCC 60.083 45.833 5.98 0.00 44.94 4.46
2330 3960 4.810345 AGTTTATCCCAAAAACTGTCCCA 58.190 39.130 0.69 0.00 43.66 4.37
2331 3961 4.587262 AGTTTATCCCAAAAACTGTCCCAC 59.413 41.667 0.69 0.00 43.66 4.61
2332 3962 4.463050 TTATCCCAAAAACTGTCCCACT 57.537 40.909 0.00 0.00 0.00 4.00
2333 3963 5.586155 TTATCCCAAAAACTGTCCCACTA 57.414 39.130 0.00 0.00 0.00 2.74
2334 3964 3.502123 TCCCAAAAACTGTCCCACTAG 57.498 47.619 0.00 0.00 0.00 2.57
2335 3965 1.886542 CCCAAAAACTGTCCCACTAGC 59.113 52.381 0.00 0.00 0.00 3.42
2336 3966 1.886542 CCAAAAACTGTCCCACTAGCC 59.113 52.381 0.00 0.00 0.00 3.93
2337 3967 2.582052 CAAAAACTGTCCCACTAGCCA 58.418 47.619 0.00 0.00 0.00 4.75
2338 3968 3.157087 CAAAAACTGTCCCACTAGCCAT 58.843 45.455 0.00 0.00 0.00 4.40
2339 3969 3.525800 AAAACTGTCCCACTAGCCATT 57.474 42.857 0.00 0.00 0.00 3.16
2351 3981 5.163622 CCCACTAGCCATTTTTGTACTCATG 60.164 44.000 0.00 0.00 0.00 3.07
2354 3984 6.003950 ACTAGCCATTTTTGTACTCATGTGT 58.996 36.000 5.63 5.63 0.00 3.72
2356 3986 6.160576 AGCCATTTTTGTACTCATGTGTTT 57.839 33.333 5.63 0.00 0.00 2.83
2357 3987 6.215845 AGCCATTTTTGTACTCATGTGTTTC 58.784 36.000 5.63 1.40 0.00 2.78
2359 3989 6.363357 GCCATTTTTGTACTCATGTGTTTCTC 59.637 38.462 5.63 0.00 0.00 2.87
2363 3993 8.506168 TTTTTGTACTCATGTGTTTCTCTTCT 57.494 30.769 5.63 0.00 0.00 2.85
2429 4170 5.250774 TCTGTAACTATTTGCCTCCCTTCTT 59.749 40.000 0.00 0.00 0.00 2.52
2430 4171 5.253330 TGTAACTATTTGCCTCCCTTCTTG 58.747 41.667 0.00 0.00 0.00 3.02
2431 4172 4.388577 AACTATTTGCCTCCCTTCTTGT 57.611 40.909 0.00 0.00 0.00 3.16
2432 4173 4.388577 ACTATTTGCCTCCCTTCTTGTT 57.611 40.909 0.00 0.00 0.00 2.83
2439 4180 3.137544 TGCCTCCCTTCTTGTTGTTCTAA 59.862 43.478 0.00 0.00 0.00 2.10
2440 4181 3.502595 GCCTCCCTTCTTGTTGTTCTAAC 59.497 47.826 0.00 0.00 0.00 2.34
2452 4193 6.445357 TGTTGTTCTAACTTTCCCTTGTTC 57.555 37.500 0.00 0.00 0.00 3.18
2457 4198 6.605594 TGTTCTAACTTTCCCTTGTTCAATGT 59.394 34.615 0.00 0.00 0.00 2.71
2458 4199 6.633500 TCTAACTTTCCCTTGTTCAATGTG 57.367 37.500 0.00 0.00 0.00 3.21
2459 4200 4.670896 AACTTTCCCTTGTTCAATGTGG 57.329 40.909 0.00 0.00 0.00 4.17
2460 4201 3.642141 ACTTTCCCTTGTTCAATGTGGT 58.358 40.909 0.00 0.00 0.00 4.16
2461 4202 4.030216 ACTTTCCCTTGTTCAATGTGGTT 58.970 39.130 0.00 0.00 0.00 3.67
2462 4203 4.141959 ACTTTCCCTTGTTCAATGTGGTTG 60.142 41.667 0.00 0.00 39.25 3.77
2464 4205 1.602668 CCCTTGTTCAATGTGGTTGCG 60.603 52.381 0.00 0.00 37.74 4.85
2465 4206 1.336440 CCTTGTTCAATGTGGTTGCGA 59.664 47.619 0.00 0.00 37.74 5.10
2466 4207 2.030007 CCTTGTTCAATGTGGTTGCGAT 60.030 45.455 0.00 0.00 37.74 4.58
2467 4208 3.190327 CCTTGTTCAATGTGGTTGCGATA 59.810 43.478 0.00 0.00 37.74 2.92
2468 4209 4.142403 CCTTGTTCAATGTGGTTGCGATAT 60.142 41.667 0.00 0.00 37.74 1.63
2469 4210 5.065859 CCTTGTTCAATGTGGTTGCGATATA 59.934 40.000 0.00 0.00 37.74 0.86
2470 4211 6.238731 CCTTGTTCAATGTGGTTGCGATATAT 60.239 38.462 0.00 0.00 37.74 0.86
2472 4213 7.094508 TGTTCAATGTGGTTGCGATATATTT 57.905 32.000 0.00 0.00 37.74 1.40
2473 4214 7.192913 TGTTCAATGTGGTTGCGATATATTTC 58.807 34.615 0.00 0.00 37.74 2.17
2474 4215 6.312399 TCAATGTGGTTGCGATATATTTCC 57.688 37.500 0.00 0.00 37.74 3.13
2475 4216 6.061441 TCAATGTGGTTGCGATATATTTCCT 58.939 36.000 0.00 0.00 37.74 3.36
2485 4241 5.408299 TGCGATATATTTCCTTCGTGGATTG 59.592 40.000 1.20 0.00 45.68 2.67
2487 4243 6.147164 GCGATATATTTCCTTCGTGGATTGAA 59.853 38.462 1.20 0.00 45.68 2.69
2490 4246 4.766404 ATTTCCTTCGTGGATTGAACAC 57.234 40.909 1.20 0.00 45.68 3.32
2491 4247 3.485463 TTCCTTCGTGGATTGAACACT 57.515 42.857 1.20 0.00 45.68 3.55
2492 4248 3.485463 TCCTTCGTGGATTGAACACTT 57.515 42.857 0.00 0.00 40.56 3.16
2496 4252 4.036262 CCTTCGTGGATTGAACACTTTGAA 59.964 41.667 0.00 0.00 38.35 2.69
2504 4260 8.968242 GTGGATTGAACACTTTGAATTTTCTAC 58.032 33.333 0.00 0.00 35.98 2.59
2505 4261 8.690884 TGGATTGAACACTTTGAATTTTCTACA 58.309 29.630 0.00 0.00 0.00 2.74
2511 4267 5.402270 ACACTTTGAATTTTCTACATTGCGC 59.598 36.000 0.00 0.00 0.00 6.09
2544 4306 2.092429 GGAAGGGGTTGATGATGCTACA 60.092 50.000 0.00 0.00 0.00 2.74
2547 4309 2.092212 AGGGGTTGATGATGCTACAAGG 60.092 50.000 0.00 0.00 0.00 3.61
2552 4314 3.084536 TGATGATGCTACAAGGGCAAA 57.915 42.857 0.00 0.00 43.14 3.68
2578 4340 6.395426 TGAACAGTGAGATGAAAGCAATTT 57.605 33.333 0.00 0.00 0.00 1.82
2598 4363 2.676748 TGGCCAAGTGAGTCCATTTTT 58.323 42.857 0.61 0.00 0.00 1.94
2599 4364 2.364970 TGGCCAAGTGAGTCCATTTTTG 59.635 45.455 0.61 0.00 0.00 2.44
2600 4365 2.407090 GCCAAGTGAGTCCATTTTTGC 58.593 47.619 0.00 0.00 0.00 3.68
2602 4367 3.493176 GCCAAGTGAGTCCATTTTTGCTT 60.493 43.478 0.00 0.00 0.00 3.91
2604 4369 4.301628 CAAGTGAGTCCATTTTTGCTTCC 58.698 43.478 0.00 0.00 0.00 3.46
2613 4378 3.499537 CCATTTTTGCTTCCTTTTCCTGC 59.500 43.478 0.00 0.00 0.00 4.85
2614 4379 2.908688 TTTTGCTTCCTTTTCCTGCC 57.091 45.000 0.00 0.00 0.00 4.85
2623 4388 5.240403 GCTTCCTTTTCCTGCCTATTCATAG 59.760 44.000 0.00 0.00 0.00 2.23
2686 4457 6.167685 TCAATTAACTAGGTTTGAGCGCTAA 58.832 36.000 11.50 0.00 0.00 3.09
2687 4458 6.312918 TCAATTAACTAGGTTTGAGCGCTAAG 59.687 38.462 11.50 1.89 0.00 2.18
2691 4462 0.389948 AGGTTTGAGCGCTAAGTCCG 60.390 55.000 11.50 0.00 0.00 4.79
2908 6664 2.135139 CGCGAATGCACAGGTATATGT 58.865 47.619 0.00 0.00 42.97 2.29
3069 6893 7.087409 TGCACCTGTAATGATTAATTCAGTG 57.913 36.000 0.00 0.00 37.89 3.66
3110 6934 6.757010 TCTCATTTCAGATAAAAGTACGCCTC 59.243 38.462 0.00 0.00 0.00 4.70
3202 7026 5.862924 ATCAAGAACGTTGATGTTACTGG 57.137 39.130 5.00 0.00 37.71 4.00
3236 7060 6.730175 TCTAAGTCATCTAAGTCTTGATCGC 58.270 40.000 0.00 0.00 0.00 4.58
3293 7117 4.457810 CTGTATGGCGCTATTTTGATTCG 58.542 43.478 12.84 0.00 0.00 3.34
3296 7120 0.310854 GGCGCTATTTTGATTCGGGG 59.689 55.000 7.64 0.00 0.00 5.73
3312 7136 2.026636 TCGGGGGAATTAAAGACCACAG 60.027 50.000 0.00 0.00 0.00 3.66
3333 7157 1.410882 GCGGAGTAGATCTTGCCTCTT 59.589 52.381 0.00 0.00 0.00 2.85
3371 7195 5.046910 ACGAGAAAATGTTAAGCACATGG 57.953 39.130 0.00 0.00 46.23 3.66
3389 7213 1.511305 GCGAATCCACGAGGTGAGA 59.489 57.895 0.00 0.00 35.23 3.27
3399 7223 1.407258 ACGAGGTGAGATAGCTGCTTC 59.593 52.381 7.79 5.61 37.23 3.86
3462 7292 8.763049 TGAATGGCTTAATCTACATTCTATCG 57.237 34.615 14.80 0.00 45.70 2.92
3609 7439 0.322816 TTGGGATGAACTGCTCTGGC 60.323 55.000 0.00 0.00 39.26 4.85
3753 7585 2.165234 TCCATGCTTCTCTCTCACTTCG 59.835 50.000 0.00 0.00 0.00 3.79
3778 7615 5.013547 CCTATACTACATCTCCCTGACCTG 58.986 50.000 0.00 0.00 0.00 4.00
3818 7655 7.450074 TGTGTAAGGTGTATCATTCTGAAAGT 58.550 34.615 0.00 0.00 33.76 2.66
4016 8045 8.920665 GCTAATACATATTTCTGCTACACTCTG 58.079 37.037 0.00 0.00 0.00 3.35
4100 8129 7.099266 TGTGAAATATCTGCAACTATTTGGG 57.901 36.000 14.61 0.00 32.81 4.12
4101 8130 6.663093 TGTGAAATATCTGCAACTATTTGGGT 59.337 34.615 14.61 0.00 32.81 4.51
4188 8246 7.921786 TTATCAGAGTTTTCTACATTGTGGG 57.078 36.000 0.00 0.00 30.73 4.61
4212 8270 4.703897 CAGTGTTAAGGAAGAGGTTGACA 58.296 43.478 0.00 0.00 0.00 3.58
4245 8306 7.472543 AGCAAAAATGAATAGTCGTTATGGAC 58.527 34.615 0.00 0.00 32.46 4.02
4275 8339 0.395311 CATGCCAGGAGGTGAGCAAT 60.395 55.000 0.00 0.00 36.37 3.56
4310 8529 6.071320 AGGATAGCTTCCCCATTTTTATGTC 58.929 40.000 10.27 0.00 46.81 3.06
4336 8564 9.408648 CATAAACAACCTAACTGGGAGATTATT 57.591 33.333 0.00 0.00 41.11 1.40
4340 8568 3.722101 ACCTAACTGGGAGATTATTGGGG 59.278 47.826 0.00 0.00 41.11 4.96
4341 8569 3.980698 CCTAACTGGGAGATTATTGGGGA 59.019 47.826 0.00 0.00 0.00 4.81
4342 8570 4.603610 CCTAACTGGGAGATTATTGGGGAT 59.396 45.833 0.00 0.00 0.00 3.85
4343 8571 4.731313 AACTGGGAGATTATTGGGGATC 57.269 45.455 0.00 0.00 0.00 3.36
4344 8572 2.989571 ACTGGGAGATTATTGGGGATCC 59.010 50.000 1.92 1.92 0.00 3.36
4345 8573 3.263724 CTGGGAGATTATTGGGGATCCT 58.736 50.000 12.58 0.00 0.00 3.24
4346 8574 4.140204 ACTGGGAGATTATTGGGGATCCTA 60.140 45.833 12.58 0.00 0.00 2.94
4395 8623 9.144747 GGTCATATACTGTTCATACATAGCAAG 57.855 37.037 0.00 0.00 32.86 4.01
4526 8754 2.028420 GCATGTGGCACATCAGTCTA 57.972 50.000 29.32 0.74 44.52 2.59
4638 9316 1.273048 GCAAGATGTGGAAATGGTGCA 59.727 47.619 0.00 0.00 0.00 4.57
4694 9372 1.212195 GAAGGGTAGGTGGGATGGAAC 59.788 57.143 0.00 0.00 0.00 3.62
4711 9389 5.197224 TGGAACAAGGAAGATGGATCATT 57.803 39.130 0.00 0.00 31.92 2.57
4714 9392 6.069440 TGGAACAAGGAAGATGGATCATTACT 60.069 38.462 0.00 0.00 31.92 2.24
4745 11315 9.956720 GACTCCAATTTTCTTGGATTACATATG 57.043 33.333 7.12 0.00 46.47 1.78
4754 11324 9.527157 TTTCTTGGATTACATATGGAAAGTTGA 57.473 29.630 4.01 0.00 0.00 3.18
4755 11325 9.527157 TTCTTGGATTACATATGGAAAGTTGAA 57.473 29.630 4.01 3.87 0.00 2.69
4792 11362 2.198426 CCCCTTGGCGGCCAATAT 59.802 61.111 32.73 0.00 43.07 1.28
4833 11403 5.804639 TGAGTAGTTCCTTATGTTGCACAT 58.195 37.500 6.93 6.93 42.35 3.21
4889 11460 2.758130 TGTGTATCATGCTAGGTGGGA 58.242 47.619 0.00 0.00 0.00 4.37
4955 11526 5.486526 TGAGCAAACCATTCAAAAGTGTTT 58.513 33.333 0.00 0.00 0.00 2.83
4960 11531 6.522855 GCAAACCATTCAAAAGTGTTTGTTTC 59.477 34.615 13.08 0.00 44.59 2.78
4971 11542 5.766150 AGTGTTTGTTTCGAAATGGATCA 57.234 34.783 14.69 3.89 0.00 2.92
4984 11555 2.672961 TGGATCAAAGTGCCTACTCG 57.327 50.000 0.00 0.00 35.69 4.18
5029 11600 5.916883 ACGTCTTGCTTCAAAAATGAATCAG 59.083 36.000 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 6.163476 TGGGCAATATTAGCGTCACTTATAG 58.837 40.000 0.00 0.00 0.00 1.31
22 23 3.206150 CTTGGGCAATATTAGCGTCACT 58.794 45.455 0.00 0.00 0.00 3.41
27 28 7.549134 TGATCTAATACTTGGGCAATATTAGCG 59.451 37.037 0.00 0.00 38.18 4.26
57 58 7.041372 GGTGACAGAATAACACACACATTTACT 60.041 37.037 0.00 0.00 36.42 2.24
69 70 5.079689 TCATTAGCGGTGACAGAATAACA 57.920 39.130 0.00 0.00 0.00 2.41
70 71 6.417191 TTTCATTAGCGGTGACAGAATAAC 57.583 37.500 0.00 0.00 0.00 1.89
73 74 7.498900 TCAATATTTCATTAGCGGTGACAGAAT 59.501 33.333 0.00 0.00 0.00 2.40
76 77 6.603237 TCAATATTTCATTAGCGGTGACAG 57.397 37.500 0.00 0.00 0.00 3.51
100 101 6.948886 ACATTTTACATACAACACCCCATACA 59.051 34.615 0.00 0.00 0.00 2.29
208 209 4.766373 ACACATGTGGCACTTATCATTTGA 59.234 37.500 28.64 0.00 34.19 2.69
223 224 1.081906 GCTTCGTGCCACACATGTG 60.082 57.895 24.25 24.25 45.23 3.21
227 228 1.514678 GGATTGCTTCGTGCCACACA 61.515 55.000 0.00 0.00 42.00 3.72
320 326 4.243007 AGTTGTTAAGCATGGCAACTTC 57.757 40.909 9.15 0.00 46.18 3.01
335 341 6.907578 TGCAAGGATGGCAACTTTAGTTGTT 61.908 40.000 20.31 8.81 46.27 2.83
356 362 8.502387 GTTTTTGATGGCAAGTTTAATAATGCA 58.498 29.630 0.00 0.00 40.51 3.96
361 367 9.770097 TGAATGTTTTTGATGGCAAGTTTAATA 57.230 25.926 0.00 0.00 35.04 0.98
362 368 8.674263 TGAATGTTTTTGATGGCAAGTTTAAT 57.326 26.923 0.00 0.00 35.04 1.40
363 369 8.498054 TTGAATGTTTTTGATGGCAAGTTTAA 57.502 26.923 0.00 0.00 35.04 1.52
374 380 6.479660 ACATCGCAACTTTGAATGTTTTTGAT 59.520 30.769 0.00 0.00 34.52 2.57
377 383 5.580297 ACACATCGCAACTTTGAATGTTTTT 59.420 32.000 7.37 0.00 35.37 1.94
382 388 3.358700 CGAACACATCGCAACTTTGAATG 59.641 43.478 0.00 0.00 45.89 2.67
383 389 3.554524 CGAACACATCGCAACTTTGAAT 58.445 40.909 0.00 0.00 45.89 2.57
385 391 2.661504 CGAACACATCGCAACTTTGA 57.338 45.000 0.00 0.00 45.89 2.69
404 410 4.090729 CGATAAATGTCACACATGTGCAC 58.909 43.478 25.68 21.15 45.25 4.57
408 414 4.214986 TCCCGATAAATGTCACACATGT 57.785 40.909 0.00 0.00 37.97 3.21
409 415 4.214119 GGATCCCGATAAATGTCACACATG 59.786 45.833 0.00 0.00 37.97 3.21
410 416 4.103153 AGGATCCCGATAAATGTCACACAT 59.897 41.667 8.55 0.00 41.31 3.21
411 417 3.454447 AGGATCCCGATAAATGTCACACA 59.546 43.478 8.55 0.00 0.00 3.72
412 418 4.073293 AGGATCCCGATAAATGTCACAC 57.927 45.455 8.55 0.00 0.00 3.82
425 432 5.932883 GGCTAGACTTAATTTTAGGATCCCG 59.067 44.000 8.55 0.00 0.00 5.14
429 436 6.101881 AGCCAGGCTAGACTTAATTTTAGGAT 59.898 38.462 14.18 0.00 36.99 3.24
463 470 3.824443 CCTTGTCCGTGTCCCTTATTTTT 59.176 43.478 0.00 0.00 0.00 1.94
474 481 4.721132 TCCTTTTTATTCCTTGTCCGTGT 58.279 39.130 0.00 0.00 0.00 4.49
529 536 3.205784 AGATGAATTAGGCACTGGAGC 57.794 47.619 0.00 0.00 41.52 4.70
532 539 4.422073 TGGTAGATGAATTAGGCACTGG 57.578 45.455 0.00 0.00 41.52 4.00
540 556 6.984474 CGAAGTAGGCTTTGGTAGATGAATTA 59.016 38.462 0.00 0.00 34.61 1.40
581 606 5.037598 AGGGTTAGTAGGCTTTGGTAGATT 58.962 41.667 0.00 0.00 0.00 2.40
582 607 4.632292 AGGGTTAGTAGGCTTTGGTAGAT 58.368 43.478 0.00 0.00 0.00 1.98
583 608 4.070681 AGGGTTAGTAGGCTTTGGTAGA 57.929 45.455 0.00 0.00 0.00 2.59
584 609 5.945144 TTAGGGTTAGTAGGCTTTGGTAG 57.055 43.478 0.00 0.00 0.00 3.18
585 610 6.700845 TTTTAGGGTTAGTAGGCTTTGGTA 57.299 37.500 0.00 0.00 0.00 3.25
586 611 5.587760 TTTTAGGGTTAGTAGGCTTTGGT 57.412 39.130 0.00 0.00 0.00 3.67
612 637 4.466726 AGTCGAAGTAGGCTTTGGTAGATT 59.533 41.667 0.00 0.00 36.87 2.40
660 686 1.248486 GTTTCTTGGGGAAGTGGAGC 58.752 55.000 0.00 0.00 35.16 4.70
673 699 0.984230 TCCAGCAGGATCGGTTTCTT 59.016 50.000 0.00 0.00 39.61 2.52
689 715 0.680280 GCTCCGACTAGTCCACTCCA 60.680 60.000 17.23 0.00 0.00 3.86
690 716 0.680280 TGCTCCGACTAGTCCACTCC 60.680 60.000 17.23 3.20 0.00 3.85
691 717 0.736053 CTGCTCCGACTAGTCCACTC 59.264 60.000 17.23 5.28 0.00 3.51
692 718 0.328592 TCTGCTCCGACTAGTCCACT 59.671 55.000 17.23 0.00 0.00 4.00
693 719 0.736053 CTCTGCTCCGACTAGTCCAC 59.264 60.000 17.23 4.90 0.00 4.02
742 773 2.626780 GGAAACAAGCTCACCGGCC 61.627 63.158 0.00 0.00 0.00 6.13
743 774 1.896660 TGGAAACAAGCTCACCGGC 60.897 57.895 0.00 0.00 37.44 6.13
744 775 4.473643 TGGAAACAAGCTCACCGG 57.526 55.556 0.00 0.00 37.44 5.28
774 814 2.095161 GGTGGAGAAGCGATATACGGAG 60.095 54.545 0.00 0.00 42.83 4.63
775 815 1.884579 GGTGGAGAAGCGATATACGGA 59.115 52.381 0.00 0.00 42.83 4.69
776 816 1.887198 AGGTGGAGAAGCGATATACGG 59.113 52.381 0.00 0.00 42.83 4.02
777 817 2.095161 GGAGGTGGAGAAGCGATATACG 60.095 54.545 0.00 0.00 45.66 3.06
778 818 2.095161 CGGAGGTGGAGAAGCGATATAC 60.095 54.545 0.00 0.00 0.00 1.47
779 819 2.160205 CGGAGGTGGAGAAGCGATATA 58.840 52.381 0.00 0.00 0.00 0.86
780 820 0.962489 CGGAGGTGGAGAAGCGATAT 59.038 55.000 0.00 0.00 0.00 1.63
862 903 6.699642 CGATCTGAGGAGGAAACTTTTAGATC 59.300 42.308 0.00 0.00 44.43 2.75
863 904 6.578023 CGATCTGAGGAGGAAACTTTTAGAT 58.422 40.000 0.00 0.00 44.43 1.98
865 906 4.568760 GCGATCTGAGGAGGAAACTTTTAG 59.431 45.833 0.00 0.00 44.43 1.85
868 909 2.303022 TGCGATCTGAGGAGGAAACTTT 59.697 45.455 0.00 0.00 44.43 2.66
882 1004 4.521130 ATCCGTGTACAATATGCGATCT 57.479 40.909 0.00 0.00 0.00 2.75
887 1009 4.878439 TGGACTATCCGTGTACAATATGC 58.122 43.478 0.00 0.00 40.17 3.14
888 1010 6.085555 ACTGGACTATCCGTGTACAATATG 57.914 41.667 0.00 0.00 40.17 1.78
897 1022 1.033574 GAGGGACTGGACTATCCGTG 58.966 60.000 0.00 0.00 41.55 4.94
1122 2604 6.744537 CAGAAGAGAAGCGACAATTTTATTGG 59.255 38.462 4.61 0.00 0.00 3.16
1134 2623 2.558795 ACAGCTAACAGAAGAGAAGCGA 59.441 45.455 0.00 0.00 38.23 4.93
1357 2970 2.006888 ACGTGCAGACCGAATATTTGG 58.993 47.619 18.82 18.82 37.75 3.28
1358 2971 2.415168 ACACGTGCAGACCGAATATTTG 59.585 45.455 17.22 0.00 0.00 2.32
1359 2972 2.415168 CACACGTGCAGACCGAATATTT 59.585 45.455 17.22 0.00 0.00 1.40
1360 2973 1.999735 CACACGTGCAGACCGAATATT 59.000 47.619 17.22 0.00 0.00 1.28
1361 2974 1.640428 CACACGTGCAGACCGAATAT 58.360 50.000 17.22 0.00 0.00 1.28
1362 2975 3.116073 CACACGTGCAGACCGAATA 57.884 52.632 17.22 0.00 0.00 1.75
1363 2976 3.951332 CACACGTGCAGACCGAAT 58.049 55.556 17.22 0.00 0.00 3.34
1373 2986 4.588198 TGGTATCACCTACGCACACGTG 62.588 54.545 15.48 15.48 45.27 4.49
1374 2987 2.491732 TGGTATCACCTACGCACACGT 61.492 52.381 0.00 0.00 45.80 4.49
1375 2988 0.171679 TGGTATCACCTACGCACACG 59.828 55.000 0.00 0.00 41.84 4.49
1376 2989 2.268298 CTTGGTATCACCTACGCACAC 58.732 52.381 0.00 0.00 39.58 3.82
1377 2990 1.897133 ACTTGGTATCACCTACGCACA 59.103 47.619 0.00 0.00 39.58 4.57
1378 2991 2.667473 ACTTGGTATCACCTACGCAC 57.333 50.000 0.00 0.00 39.58 5.34
1379 2992 3.427909 CGTAACTTGGTATCACCTACGCA 60.428 47.826 0.00 0.00 39.58 5.24
1380 2993 3.111098 CGTAACTTGGTATCACCTACGC 58.889 50.000 0.00 0.00 39.58 4.42
1381 2994 3.111098 GCGTAACTTGGTATCACCTACG 58.889 50.000 9.34 9.34 39.58 3.51
1382 2995 3.111098 CGCGTAACTTGGTATCACCTAC 58.889 50.000 0.00 0.00 39.58 3.18
1432 3045 3.102972 TGTAGCTTCAGAATCAGGAGCT 58.897 45.455 13.10 13.10 35.24 4.09
1433 3046 3.533606 TGTAGCTTCAGAATCAGGAGC 57.466 47.619 0.00 0.00 0.00 4.70
1434 3047 5.055812 GGATTGTAGCTTCAGAATCAGGAG 58.944 45.833 8.23 0.00 31.51 3.69
1436 3049 5.033589 AGGATTGTAGCTTCAGAATCAGG 57.966 43.478 8.23 0.00 31.51 3.86
1440 3053 6.995091 GGATGTTAGGATTGTAGCTTCAGAAT 59.005 38.462 0.00 0.00 0.00 2.40
1444 3057 5.425217 TCTGGATGTTAGGATTGTAGCTTCA 59.575 40.000 0.00 0.00 0.00 3.02
1453 3066 5.762179 TCAACTGTCTGGATGTTAGGATT 57.238 39.130 0.00 0.00 0.00 3.01
1459 3072 4.074970 GTGGAATCAACTGTCTGGATGTT 58.925 43.478 0.00 0.00 0.00 2.71
1465 3078 3.904136 GTTGGTGGAATCAACTGTCTG 57.096 47.619 0.00 0.00 40.73 3.51
1475 3088 1.187567 GCAGGCCAAGTTGGTGGAAT 61.188 55.000 22.85 2.54 41.65 3.01
1503 3116 4.081917 AGGAGAAGAGAGAAAAAGCTACCG 60.082 45.833 0.00 0.00 0.00 4.02
1507 3120 5.934781 TGAAAGGAGAAGAGAGAAAAAGCT 58.065 37.500 0.00 0.00 0.00 3.74
1508 3121 6.349197 CCATGAAAGGAGAAGAGAGAAAAAGC 60.349 42.308 0.00 0.00 0.00 3.51
1510 3123 6.841601 TCCATGAAAGGAGAAGAGAGAAAAA 58.158 36.000 0.00 0.00 32.77 1.94
1536 3149 7.436080 GTGCAGCACATACAAGCATAATTAATT 59.564 33.333 21.22 5.89 37.56 1.40
1548 3161 2.849294 TACAGGTGCAGCACATACAA 57.151 45.000 26.78 6.06 35.86 2.41
1551 3164 3.625649 TGATTACAGGTGCAGCACATA 57.374 42.857 26.78 12.85 35.86 2.29
1552 3165 2.495155 TGATTACAGGTGCAGCACAT 57.505 45.000 26.78 18.17 35.86 3.21
1553 3166 2.495155 ATGATTACAGGTGCAGCACA 57.505 45.000 26.78 6.41 35.86 4.57
1554 3167 4.963276 TTAATGATTACAGGTGCAGCAC 57.037 40.909 17.97 17.97 0.00 4.40
1564 3185 7.467131 CGAGCACATGGTGAATTAATGATTACA 60.467 37.037 0.00 0.00 35.23 2.41
1565 3186 6.852853 CGAGCACATGGTGAATTAATGATTAC 59.147 38.462 0.00 0.00 35.23 1.89
1566 3187 6.542005 ACGAGCACATGGTGAATTAATGATTA 59.458 34.615 0.00 0.00 35.23 1.75
1567 3188 5.357878 ACGAGCACATGGTGAATTAATGATT 59.642 36.000 0.00 0.00 35.23 2.57
1568 3189 4.883585 ACGAGCACATGGTGAATTAATGAT 59.116 37.500 0.00 0.00 35.23 2.45
1569 3190 4.260985 ACGAGCACATGGTGAATTAATGA 58.739 39.130 0.00 0.00 35.23 2.57
1570 3191 4.621068 ACGAGCACATGGTGAATTAATG 57.379 40.909 0.00 0.00 35.23 1.90
1571 3192 4.096382 GGAACGAGCACATGGTGAATTAAT 59.904 41.667 0.00 0.00 35.23 1.40
1572 3193 3.438781 GGAACGAGCACATGGTGAATTAA 59.561 43.478 0.00 0.00 35.23 1.40
1573 3194 3.006940 GGAACGAGCACATGGTGAATTA 58.993 45.455 0.00 0.00 35.23 1.40
1574 3195 1.812571 GGAACGAGCACATGGTGAATT 59.187 47.619 0.00 0.00 35.23 2.17
1575 3196 1.271325 TGGAACGAGCACATGGTGAAT 60.271 47.619 0.00 0.00 35.23 2.57
1576 3197 0.107643 TGGAACGAGCACATGGTGAA 59.892 50.000 0.00 0.00 35.23 3.18
1577 3198 0.320683 CTGGAACGAGCACATGGTGA 60.321 55.000 0.00 0.00 35.23 4.02
1578 3199 0.320683 TCTGGAACGAGCACATGGTG 60.321 55.000 0.00 0.00 36.51 4.17
1579 3200 0.615331 ATCTGGAACGAGCACATGGT 59.385 50.000 0.00 0.00 0.00 3.55
1580 3201 1.742761 AATCTGGAACGAGCACATGG 58.257 50.000 0.00 0.00 0.00 3.66
1581 3202 4.393062 ACTTTAATCTGGAACGAGCACATG 59.607 41.667 0.00 0.00 0.00 3.21
1582 3203 4.579869 ACTTTAATCTGGAACGAGCACAT 58.420 39.130 0.00 0.00 0.00 3.21
1614 3235 3.251004 GCCCAGTGACAATCCGATTATTC 59.749 47.826 0.00 0.00 0.00 1.75
1618 3239 0.744414 CGCCCAGTGACAATCCGATT 60.744 55.000 0.00 0.00 0.00 3.34
1642 3263 4.030913 TCAACATATATCCCGGGATCCTC 58.969 47.826 39.23 0.55 36.17 3.71
1643 3264 4.074799 TCAACATATATCCCGGGATCCT 57.925 45.455 39.23 27.91 36.17 3.24
1644 3265 5.373812 AATCAACATATATCCCGGGATCC 57.626 43.478 39.23 1.92 36.17 3.36
1667 3288 6.924612 CACATTCCTGATGTTGACAATGAAAA 59.075 34.615 0.00 0.00 46.80 2.29
1670 3291 5.072055 ACACATTCCTGATGTTGACAATGA 58.928 37.500 0.00 0.00 46.80 2.57
1683 3304 3.407424 TCAACTCCAGACACATTCCTG 57.593 47.619 0.00 0.00 0.00 3.86
1685 3306 3.679389 ACATCAACTCCAGACACATTCC 58.321 45.455 0.00 0.00 0.00 3.01
1689 3310 1.605457 GCGACATCAACTCCAGACACA 60.605 52.381 0.00 0.00 0.00 3.72
1699 3320 3.425359 CCATCAAGACTTGCGACATCAAC 60.425 47.826 10.50 0.00 0.00 3.18
1706 3327 1.069978 TGTCACCATCAAGACTTGCGA 59.930 47.619 10.50 0.00 35.81 5.10
1713 3334 2.865119 ACTGCATGTCACCATCAAGA 57.135 45.000 0.00 0.00 0.00 3.02
1719 3340 0.953727 GCTCAAACTGCATGTCACCA 59.046 50.000 0.00 0.00 0.00 4.17
1754 3375 1.066502 TGAAACAGCGCCATACAGCTA 60.067 47.619 2.29 0.00 42.52 3.32
1763 3384 0.881118 TCCTGAATTGAAACAGCGCC 59.119 50.000 2.29 0.00 33.40 6.53
1764 3385 1.537202 AGTCCTGAATTGAAACAGCGC 59.463 47.619 0.00 0.00 33.40 5.92
1792 3413 3.561313 GCAAGATTTAGTCCCCTTGTGGA 60.561 47.826 0.00 0.00 38.50 4.02
1800 3421 2.505819 TGGAGAGGCAAGATTTAGTCCC 59.494 50.000 0.00 0.00 0.00 4.46
1816 3437 0.902531 CCGGTTAGAAGGCTTGGAGA 59.097 55.000 3.46 0.00 0.00 3.71
1823 3444 0.606604 TGTCTCACCGGTTAGAAGGC 59.393 55.000 19.86 10.02 0.00 4.35
1826 3447 2.559668 ACGATTGTCTCACCGGTTAGAA 59.440 45.455 19.86 6.35 0.00 2.10
1830 3451 2.929592 GCTTACGATTGTCTCACCGGTT 60.930 50.000 2.97 0.00 0.00 4.44
1834 3455 1.654105 CGTGCTTACGATTGTCTCACC 59.346 52.381 0.00 0.00 34.64 4.02
1839 3460 0.094730 GGCACGTGCTTACGATTGTC 59.905 55.000 36.84 14.82 41.70 3.18
1854 3475 4.778143 ACCTTGCGGATCCGGCAC 62.778 66.667 33.98 18.80 40.19 5.01
1861 3482 2.437359 GCAGCTCACCTTGCGGAT 60.437 61.111 0.00 0.00 35.28 4.18
1865 3486 1.068954 GTACAAAGCAGCTCACCTTGC 60.069 52.381 0.00 0.00 0.00 4.01
1866 3487 2.221169 TGTACAAAGCAGCTCACCTTG 58.779 47.619 0.00 0.00 0.00 3.61
1875 3496 9.329913 GTTATTTATGTGAACTGTACAAAGCAG 57.670 33.333 0.00 0.00 39.67 4.24
1877 3498 9.329913 CAGTTATTTATGTGAACTGTACAAAGC 57.670 33.333 0.00 0.00 43.25 3.51
1926 3556 8.308207 TGCGCATACAATGGTAGAAATATACTA 58.692 33.333 5.66 0.00 31.88 1.82
1929 3559 9.830975 ATATGCGCATACAATGGTAGAAATATA 57.169 29.630 31.17 5.74 31.88 0.86
1935 3565 4.222810 AGGATATGCGCATACAATGGTAGA 59.777 41.667 31.17 8.49 31.88 2.59
1936 3566 4.507710 AGGATATGCGCATACAATGGTAG 58.492 43.478 31.17 0.00 31.88 3.18
1937 3567 4.551702 AGGATATGCGCATACAATGGTA 57.448 40.909 31.17 10.09 0.00 3.25
1938 3568 3.423539 AGGATATGCGCATACAATGGT 57.576 42.857 31.17 15.22 0.00 3.55
1941 3571 6.710295 TGAAACTAAGGATATGCGCATACAAT 59.290 34.615 31.17 17.85 0.00 2.71
1943 3573 5.606505 TGAAACTAAGGATATGCGCATACA 58.393 37.500 31.17 17.37 0.00 2.29
1944 3574 5.696724 ACTGAAACTAAGGATATGCGCATAC 59.303 40.000 31.17 22.73 0.00 2.39
1945 3575 5.853936 ACTGAAACTAAGGATATGCGCATA 58.146 37.500 30.72 30.72 0.00 3.14
1946 3576 4.708177 ACTGAAACTAAGGATATGCGCAT 58.292 39.130 28.23 28.23 0.00 4.73
1947 3577 4.119862 GACTGAAACTAAGGATATGCGCA 58.880 43.478 14.96 14.96 0.00 6.09
1948 3578 4.119862 TGACTGAAACTAAGGATATGCGC 58.880 43.478 0.00 0.00 0.00 6.09
1949 3579 5.352284 ACTGACTGAAACTAAGGATATGCG 58.648 41.667 0.00 0.00 0.00 4.73
1950 3580 8.144478 TCATACTGACTGAAACTAAGGATATGC 58.856 37.037 0.00 0.00 0.00 3.14
1951 3581 9.689976 CTCATACTGACTGAAACTAAGGATATG 57.310 37.037 0.00 0.00 0.00 1.78
1952 3582 9.427821 ACTCATACTGACTGAAACTAAGGATAT 57.572 33.333 0.00 0.00 0.00 1.63
1968 3598 6.148315 CACAGAGAAAATGCAACTCATACTGA 59.852 38.462 13.19 0.00 34.33 3.41
1971 3601 6.246420 ACACAGAGAAAATGCAACTCATAC 57.754 37.500 13.19 0.00 34.33 2.39
1977 3607 6.494842 TGAAGTTACACAGAGAAAATGCAAC 58.505 36.000 0.00 0.00 0.00 4.17
1985 3615 6.582636 AGTGACAATGAAGTTACACAGAGAA 58.417 36.000 0.00 0.00 32.45 2.87
1988 3618 7.471721 CAAAAGTGACAATGAAGTTACACAGA 58.528 34.615 0.00 0.00 32.45 3.41
2002 3632 0.591170 GCCTAGCGCAAAAGTGACAA 59.409 50.000 11.47 0.00 37.47 3.18
2016 3646 1.453669 GCCTCCAATCCCTGCCTAG 59.546 63.158 0.00 0.00 0.00 3.02
2034 3664 2.355007 GCCATCAAAATCAACAAGGGGG 60.355 50.000 0.00 0.00 0.00 5.40
2055 3685 4.243007 GGAGTTCATCCCAACAAAGTTG 57.757 45.455 3.00 3.00 43.01 3.16
2079 3709 4.023536 GCAGTCTTTTCCATTTTGGTACGA 60.024 41.667 0.00 0.00 39.03 3.43
2092 3722 0.438830 CGCACGTAGGCAGTCTTTTC 59.561 55.000 0.00 0.00 0.00 2.29
2107 3737 0.741221 AGAATTCGCTCCCTTCGCAC 60.741 55.000 0.00 0.00 0.00 5.34
2120 3750 7.430502 CCTTATGCAACAAGAATCGAAGAATTC 59.569 37.037 11.86 0.00 43.58 2.17
2129 3759 4.038402 CCATCCCCTTATGCAACAAGAATC 59.962 45.833 11.86 0.00 0.00 2.52
2130 3760 3.962718 CCATCCCCTTATGCAACAAGAAT 59.037 43.478 11.86 2.13 0.00 2.40
2137 3767 1.215173 CCTGACCATCCCCTTATGCAA 59.785 52.381 0.00 0.00 0.00 4.08
2138 3768 0.846015 CCTGACCATCCCCTTATGCA 59.154 55.000 0.00 0.00 0.00 3.96
2139 3769 0.846693 ACCTGACCATCCCCTTATGC 59.153 55.000 0.00 0.00 0.00 3.14
2140 3770 3.560025 GCATACCTGACCATCCCCTTATG 60.560 52.174 0.00 0.00 0.00 1.90
2141 3771 2.644798 GCATACCTGACCATCCCCTTAT 59.355 50.000 0.00 0.00 0.00 1.73
2143 3773 0.846693 GCATACCTGACCATCCCCTT 59.153 55.000 0.00 0.00 0.00 3.95
2145 3775 0.179018 GTGCATACCTGACCATCCCC 60.179 60.000 0.00 0.00 0.00 4.81
2146 3776 0.546122 TGTGCATACCTGACCATCCC 59.454 55.000 0.00 0.00 0.00 3.85
2162 3792 6.144402 GGCAGTTCATCAATACAAAAAGTGTG 59.856 38.462 0.00 0.00 41.89 3.82
2170 3800 4.016444 GGAAGGGCAGTTCATCAATACAA 58.984 43.478 1.81 0.00 0.00 2.41
2171 3801 3.620488 GGAAGGGCAGTTCATCAATACA 58.380 45.455 1.81 0.00 0.00 2.29
2184 3814 1.729267 AAGCCAAAGAGGGAAGGGCA 61.729 55.000 0.00 0.00 46.96 5.36
2186 3816 1.341089 GGTAAGCCAAAGAGGGAAGGG 60.341 57.143 0.00 0.00 38.09 3.95
2192 3822 2.094675 CACATGGGTAAGCCAAAGAGG 58.905 52.381 0.00 0.00 41.84 3.69
2203 3833 2.234661 CAGCAAGAGAGACACATGGGTA 59.765 50.000 0.00 0.00 0.00 3.69
2211 3841 1.273759 AGGATGCAGCAAGAGAGACA 58.726 50.000 3.51 0.00 0.00 3.41
2212 3842 3.749665 ATAGGATGCAGCAAGAGAGAC 57.250 47.619 3.51 0.00 0.00 3.36
2213 3843 3.453717 ACAATAGGATGCAGCAAGAGAGA 59.546 43.478 3.51 0.00 0.00 3.10
2220 3850 0.034283 TGGCACAATAGGATGCAGCA 60.034 50.000 3.51 0.00 43.93 4.41
2221 3851 0.383231 GTGGCACAATAGGATGCAGC 59.617 55.000 13.86 0.00 44.16 5.25
2222 3852 1.753930 TGTGGCACAATAGGATGCAG 58.246 50.000 19.74 0.00 44.16 4.41
2234 3864 6.699575 AAAATAGAAGGATGTATGTGGCAC 57.300 37.500 11.55 11.55 0.00 5.01
2249 3879 8.963130 CGCACACAAACTCAAATAAAAATAGAA 58.037 29.630 0.00 0.00 0.00 2.10
2252 3882 7.114247 GCTCGCACACAAACTCAAATAAAAATA 59.886 33.333 0.00 0.00 0.00 1.40
2253 3883 6.074356 GCTCGCACACAAACTCAAATAAAAAT 60.074 34.615 0.00 0.00 0.00 1.82
2254 3884 5.231147 GCTCGCACACAAACTCAAATAAAAA 59.769 36.000 0.00 0.00 0.00 1.94
2260 3890 1.063912 CAGCTCGCACACAAACTCAAA 59.936 47.619 0.00 0.00 0.00 2.69
2263 3893 1.497991 TACAGCTCGCACACAAACTC 58.502 50.000 0.00 0.00 0.00 3.01
2264 3894 2.069273 GATACAGCTCGCACACAAACT 58.931 47.619 0.00 0.00 0.00 2.66
2265 3895 1.798223 TGATACAGCTCGCACACAAAC 59.202 47.619 0.00 0.00 0.00 2.93
2266 3896 2.162319 TGATACAGCTCGCACACAAA 57.838 45.000 0.00 0.00 0.00 2.83
2267 3897 1.798223 GTTGATACAGCTCGCACACAA 59.202 47.619 0.00 0.00 0.00 3.33
2268 3898 1.270041 TGTTGATACAGCTCGCACACA 60.270 47.619 0.00 0.00 0.00 3.72
2269 3899 1.391485 CTGTTGATACAGCTCGCACAC 59.609 52.381 0.00 0.00 44.81 3.82
2270 3900 1.713597 CTGTTGATACAGCTCGCACA 58.286 50.000 0.00 0.00 44.81 4.57
2279 3909 4.020218 ACCTTAGAAGCTGCTGTTGATACA 60.020 41.667 3.74 0.00 0.00 2.29
2280 3910 4.508662 ACCTTAGAAGCTGCTGTTGATAC 58.491 43.478 3.74 0.00 0.00 2.24
2281 3911 4.826274 ACCTTAGAAGCTGCTGTTGATA 57.174 40.909 3.74 0.00 0.00 2.15
2282 3912 3.710209 ACCTTAGAAGCTGCTGTTGAT 57.290 42.857 3.74 0.00 0.00 2.57
2283 3913 3.492102 AACCTTAGAAGCTGCTGTTGA 57.508 42.857 3.74 0.00 0.00 3.18
2284 3914 4.377431 CGTAAACCTTAGAAGCTGCTGTTG 60.377 45.833 3.74 0.00 0.00 3.33
2285 3915 3.746492 CGTAAACCTTAGAAGCTGCTGTT 59.254 43.478 3.74 0.00 0.00 3.16
2286 3916 3.006537 TCGTAAACCTTAGAAGCTGCTGT 59.993 43.478 3.74 0.00 0.00 4.40
2287 3917 3.585862 TCGTAAACCTTAGAAGCTGCTG 58.414 45.455 3.74 0.00 0.00 4.41
2288 3918 3.258622 ACTCGTAAACCTTAGAAGCTGCT 59.741 43.478 0.00 0.00 0.00 4.24
2289 3919 3.586892 ACTCGTAAACCTTAGAAGCTGC 58.413 45.455 0.00 0.00 0.00 5.25
2290 3920 7.010275 GGATAAACTCGTAAACCTTAGAAGCTG 59.990 40.741 0.00 0.00 0.00 4.24
2291 3921 7.040494 GGATAAACTCGTAAACCTTAGAAGCT 58.960 38.462 0.00 0.00 0.00 3.74
2292 3922 6.257411 GGGATAAACTCGTAAACCTTAGAAGC 59.743 42.308 0.00 0.00 0.00 3.86
2293 3923 7.325694 TGGGATAAACTCGTAAACCTTAGAAG 58.674 38.462 0.00 0.00 0.00 2.85
2294 3924 7.243604 TGGGATAAACTCGTAAACCTTAGAA 57.756 36.000 0.00 0.00 0.00 2.10
2295 3925 6.855763 TGGGATAAACTCGTAAACCTTAGA 57.144 37.500 0.00 0.00 0.00 2.10
2296 3926 7.910441 TTTGGGATAAACTCGTAAACCTTAG 57.090 36.000 0.00 0.00 0.00 2.18
2297 3927 8.567104 GTTTTTGGGATAAACTCGTAAACCTTA 58.433 33.333 0.00 0.00 33.71 2.69
2298 3928 7.286087 AGTTTTTGGGATAAACTCGTAAACCTT 59.714 33.333 0.00 0.00 40.78 3.50
2299 3929 6.774170 AGTTTTTGGGATAAACTCGTAAACCT 59.226 34.615 0.00 0.00 40.78 3.50
2300 3930 6.859508 CAGTTTTTGGGATAAACTCGTAAACC 59.140 38.462 0.00 0.00 42.32 3.27
2301 3931 7.420002 ACAGTTTTTGGGATAAACTCGTAAAC 58.580 34.615 0.00 0.00 42.32 2.01
2302 3932 7.255208 GGACAGTTTTTGGGATAAACTCGTAAA 60.255 37.037 0.00 0.00 42.32 2.01
2303 3933 6.205270 GGACAGTTTTTGGGATAAACTCGTAA 59.795 38.462 0.00 0.00 42.32 3.18
2304 3934 5.702209 GGACAGTTTTTGGGATAAACTCGTA 59.298 40.000 0.00 0.00 42.32 3.43
2305 3935 4.517832 GGACAGTTTTTGGGATAAACTCGT 59.482 41.667 0.00 0.00 42.32 4.18
2306 3936 4.082949 GGGACAGTTTTTGGGATAAACTCG 60.083 45.833 0.00 0.00 42.32 4.18
2307 3937 4.830600 TGGGACAGTTTTTGGGATAAACTC 59.169 41.667 0.00 0.00 42.32 3.01
2308 3938 4.587262 GTGGGACAGTTTTTGGGATAAACT 59.413 41.667 0.00 0.00 44.38 2.66
2309 3939 4.587262 AGTGGGACAGTTTTTGGGATAAAC 59.413 41.667 0.00 0.00 40.27 2.01
2310 3940 4.810345 AGTGGGACAGTTTTTGGGATAAA 58.190 39.130 0.00 0.00 40.27 1.40
2311 3941 4.463050 AGTGGGACAGTTTTTGGGATAA 57.537 40.909 0.00 0.00 40.27 1.75
2312 3942 4.566907 GCTAGTGGGACAGTTTTTGGGATA 60.567 45.833 0.00 0.00 40.27 2.59
2313 3943 3.814316 GCTAGTGGGACAGTTTTTGGGAT 60.814 47.826 0.00 0.00 40.27 3.85
2314 3944 2.488347 GCTAGTGGGACAGTTTTTGGGA 60.488 50.000 0.00 0.00 40.27 4.37
2315 3945 1.886542 GCTAGTGGGACAGTTTTTGGG 59.113 52.381 0.00 0.00 40.27 4.12
2316 3946 1.886542 GGCTAGTGGGACAGTTTTTGG 59.113 52.381 0.00 0.00 40.27 3.28
2317 3947 2.582052 TGGCTAGTGGGACAGTTTTTG 58.418 47.619 0.00 0.00 40.27 2.44
2318 3948 3.525800 ATGGCTAGTGGGACAGTTTTT 57.474 42.857 0.00 0.00 40.27 1.94
2319 3949 3.525800 AATGGCTAGTGGGACAGTTTT 57.474 42.857 0.00 0.00 40.27 2.43
2320 3950 3.525800 AAATGGCTAGTGGGACAGTTT 57.474 42.857 0.00 0.00 40.27 2.66
2321 3951 3.525800 AAAATGGCTAGTGGGACAGTT 57.474 42.857 0.00 0.00 40.27 3.16
2323 3953 3.157087 ACAAAAATGGCTAGTGGGACAG 58.843 45.455 0.00 0.00 41.80 3.51
2324 3954 3.237268 ACAAAAATGGCTAGTGGGACA 57.763 42.857 0.00 0.00 0.00 4.02
2325 3955 4.332828 AGTACAAAAATGGCTAGTGGGAC 58.667 43.478 0.00 0.00 0.00 4.46
2326 3956 4.042311 TGAGTACAAAAATGGCTAGTGGGA 59.958 41.667 0.00 0.00 0.00 4.37
2327 3957 4.331968 TGAGTACAAAAATGGCTAGTGGG 58.668 43.478 0.00 0.00 0.00 4.61
2328 3958 5.415701 ACATGAGTACAAAAATGGCTAGTGG 59.584 40.000 0.00 0.00 0.00 4.00
2329 3959 6.072508 ACACATGAGTACAAAAATGGCTAGTG 60.073 38.462 0.00 0.00 0.00 2.74
2330 3960 6.003950 ACACATGAGTACAAAAATGGCTAGT 58.996 36.000 0.00 0.00 0.00 2.57
2331 3961 6.500684 ACACATGAGTACAAAAATGGCTAG 57.499 37.500 0.00 0.00 0.00 3.42
2332 3962 6.892658 AACACATGAGTACAAAAATGGCTA 57.107 33.333 0.00 0.00 0.00 3.93
2333 3963 5.789643 AACACATGAGTACAAAAATGGCT 57.210 34.783 0.00 0.00 0.00 4.75
2334 3964 6.215845 AGAAACACATGAGTACAAAAATGGC 58.784 36.000 0.00 0.00 0.00 4.40
2335 3965 7.651808 AGAGAAACACATGAGTACAAAAATGG 58.348 34.615 0.00 0.00 0.00 3.16
2336 3966 9.173939 GAAGAGAAACACATGAGTACAAAAATG 57.826 33.333 0.00 0.00 0.00 2.32
2337 3967 9.125026 AGAAGAGAAACACATGAGTACAAAAAT 57.875 29.630 0.00 0.00 0.00 1.82
2338 3968 8.506168 AGAAGAGAAACACATGAGTACAAAAA 57.494 30.769 0.00 0.00 0.00 1.94
2339 3969 8.506168 AAGAAGAGAAACACATGAGTACAAAA 57.494 30.769 0.00 0.00 0.00 2.44
2373 4113 7.809806 CACCGCAGAGAATTTAAGAAAATCTTT 59.190 33.333 0.00 0.00 37.89 2.52
2396 4137 8.451908 AGGCAAATAGTTACAGATATTTCACC 57.548 34.615 0.00 0.00 30.95 4.02
2429 4170 5.946972 TGAACAAGGGAAAGTTAGAACAACA 59.053 36.000 0.00 0.00 0.00 3.33
2430 4171 6.445357 TGAACAAGGGAAAGTTAGAACAAC 57.555 37.500 0.00 0.00 0.00 3.32
2431 4172 7.123547 ACATTGAACAAGGGAAAGTTAGAACAA 59.876 33.333 4.37 0.00 0.00 2.83
2432 4173 6.605594 ACATTGAACAAGGGAAAGTTAGAACA 59.394 34.615 4.37 0.00 0.00 3.18
2439 4180 3.642141 ACCACATTGAACAAGGGAAAGT 58.358 40.909 4.37 0.00 0.00 2.66
2440 4181 4.370917 CAACCACATTGAACAAGGGAAAG 58.629 43.478 4.37 0.00 41.23 2.62
2452 4193 6.317789 AGGAAATATATCGCAACCACATTG 57.682 37.500 0.00 0.00 41.69 2.82
2457 4198 4.509970 CACGAAGGAAATATATCGCAACCA 59.490 41.667 0.00 0.00 38.80 3.67
2458 4199 4.084013 CCACGAAGGAAATATATCGCAACC 60.084 45.833 0.00 0.00 41.22 3.77
2459 4200 4.748102 TCCACGAAGGAAATATATCGCAAC 59.252 41.667 0.00 0.00 45.65 4.17
2460 4201 4.951254 TCCACGAAGGAAATATATCGCAA 58.049 39.130 0.00 0.00 45.65 4.85
2461 4202 4.594123 TCCACGAAGGAAATATATCGCA 57.406 40.909 0.00 0.00 45.65 5.10
2473 4214 3.563808 TCAAAGTGTTCAATCCACGAAGG 59.436 43.478 0.00 0.00 37.88 3.46
2474 4215 4.811555 TCAAAGTGTTCAATCCACGAAG 57.188 40.909 0.00 0.00 37.88 3.79
2475 4216 5.766150 ATTCAAAGTGTTCAATCCACGAA 57.234 34.783 0.00 0.00 37.88 3.85
2485 4241 7.493313 CGCAATGTAGAAAATTCAAAGTGTTC 58.507 34.615 0.00 0.00 0.00 3.18
2487 4243 5.402270 GCGCAATGTAGAAAATTCAAAGTGT 59.598 36.000 0.30 0.00 0.00 3.55
2490 4246 5.443693 GCAGCGCAATGTAGAAAATTCAAAG 60.444 40.000 11.47 0.00 0.00 2.77
2491 4247 4.385447 GCAGCGCAATGTAGAAAATTCAAA 59.615 37.500 11.47 0.00 0.00 2.69
2492 4248 3.919804 GCAGCGCAATGTAGAAAATTCAA 59.080 39.130 11.47 0.00 0.00 2.69
2496 4252 2.489329 ACTGCAGCGCAATGTAGAAAAT 59.511 40.909 19.04 0.00 38.41 1.82
2504 4260 1.609932 CTTAACACTGCAGCGCAATG 58.390 50.000 15.27 6.68 41.75 2.82
2505 4261 0.523072 CCTTAACACTGCAGCGCAAT 59.477 50.000 15.27 0.00 38.41 3.56
2511 4267 1.073923 ACCCCTTCCTTAACACTGCAG 59.926 52.381 13.48 13.48 0.00 4.41
2544 4306 3.960102 TCTCACTGTTCATTTTTGCCCTT 59.040 39.130 0.00 0.00 0.00 3.95
2547 4309 5.125100 TCATCTCACTGTTCATTTTTGCC 57.875 39.130 0.00 0.00 0.00 4.52
2552 4314 6.395426 TTGCTTTCATCTCACTGTTCATTT 57.605 33.333 0.00 0.00 0.00 2.32
2578 4340 2.364970 CAAAAATGGACTCACTTGGCCA 59.635 45.455 0.00 0.00 34.45 5.36
2598 4363 3.245229 TGAATAGGCAGGAAAAGGAAGCA 60.245 43.478 0.00 0.00 0.00 3.91
2599 4364 3.356290 TGAATAGGCAGGAAAAGGAAGC 58.644 45.455 0.00 0.00 0.00 3.86
2600 4365 5.767168 CCTATGAATAGGCAGGAAAAGGAAG 59.233 44.000 3.44 0.00 43.08 3.46
2602 4367 5.310409 CCTATGAATAGGCAGGAAAAGGA 57.690 43.478 3.44 0.00 43.08 3.36
2623 4388 8.033038 TGTGATACAGTTAATAGAACAGTCACC 58.967 37.037 0.00 0.00 0.00 4.02
2624 4389 8.861101 GTGTGATACAGTTAATAGAACAGTCAC 58.139 37.037 0.00 0.00 0.00 3.67
2661 4432 5.001232 AGCGCTCAAACCTAGTTAATTGAA 58.999 37.500 2.64 0.00 31.94 2.69
2686 4457 1.140589 CTCAATCTCGCTGCGGACT 59.859 57.895 23.03 5.42 0.00 3.85
2687 4458 1.153745 ACTCAATCTCGCTGCGGAC 60.154 57.895 23.03 0.00 0.00 4.79
2691 4462 1.596727 GGATTCACTCAATCTCGCTGC 59.403 52.381 0.00 0.00 40.90 5.25
2692 4463 2.864946 CTGGATTCACTCAATCTCGCTG 59.135 50.000 0.00 0.00 40.90 5.18
2698 4469 4.437930 CGCCTTTTCTGGATTCACTCAATC 60.438 45.833 0.00 0.00 40.43 2.67
2824 6574 8.522003 TGCAAACTGAATAGCTGATCATAAAAA 58.478 29.630 0.00 0.00 0.00 1.94
2908 6664 0.592637 CAGGACATGCGCTTTCAACA 59.407 50.000 9.73 0.00 0.00 3.33
3110 6934 1.070445 GACAGCCTGATGATCGGGG 59.930 63.158 21.23 10.69 43.24 5.73
3202 7026 0.179045 ATGACTTAGATGGGCGGCAC 60.179 55.000 12.47 0.00 0.00 5.01
3236 7060 4.481112 GGCTCAAACGGCATGGCG 62.481 66.667 36.56 36.56 0.00 5.69
3293 7117 2.735151 CCTGTGGTCTTTAATTCCCCC 58.265 52.381 0.00 0.00 0.00 5.40
3296 7120 1.743394 CCGCCTGTGGTCTTTAATTCC 59.257 52.381 0.00 0.00 0.00 3.01
3312 7136 0.032815 GAGGCAAGATCTACTCCGCC 59.967 60.000 0.00 3.81 43.31 6.13
3333 7157 4.541085 TCTCGTCGATATGAACGCTTAA 57.459 40.909 0.00 0.00 0.00 1.85
3371 7195 0.103208 ATCTCACCTCGTGGATTCGC 59.897 55.000 11.17 0.00 37.04 4.70
3389 7213 4.899502 ACTGTACAAACTGAAGCAGCTAT 58.100 39.130 0.00 0.00 34.37 2.97
3609 7439 2.102420 GGGGGTCTTTCTTTGTTTGGTG 59.898 50.000 0.00 0.00 0.00 4.17
3753 7585 5.011586 GGTCAGGGAGATGTAGTATAGGAC 58.988 50.000 0.00 0.00 0.00 3.85
3778 7615 9.744468 ACACCTTACACAAATTCAAATAGAAAC 57.256 29.630 0.00 0.00 40.22 2.78
3818 7655 1.696336 ACCTCAGAAGCTGCTCTTTGA 59.304 47.619 1.00 6.58 34.56 2.69
3900 7756 2.082231 GTCACAGATGCAGAGCAACAT 58.918 47.619 0.00 0.00 43.62 2.71
4016 8045 6.145535 CAGAGGTCTGTTTAAATGCAAGTTC 58.854 40.000 0.00 0.00 39.09 3.01
4188 8246 2.814336 CAACCTCTTCCTTAACACTGCC 59.186 50.000 0.00 0.00 0.00 4.85
4245 8306 4.831155 ACCTCCTGGCATGAAATATGATTG 59.169 41.667 0.00 0.00 36.63 2.67
4310 8529 8.980481 ATAATCTCCCAGTTAGGTTGTTTATG 57.020 34.615 0.00 0.00 34.66 1.90
4336 8564 2.161624 AGTGGATAGGTAGGATCCCCA 58.838 52.381 8.55 3.59 42.05 4.96
4340 8568 5.839606 ACCAAGTTAGTGGATAGGTAGGATC 59.160 44.000 0.00 0.00 41.65 3.36
4341 8569 5.602978 CACCAAGTTAGTGGATAGGTAGGAT 59.397 44.000 0.00 0.00 41.65 3.24
4342 8570 4.960469 CACCAAGTTAGTGGATAGGTAGGA 59.040 45.833 0.00 0.00 41.65 2.94
4343 8571 4.715297 ACACCAAGTTAGTGGATAGGTAGG 59.285 45.833 6.39 0.00 41.65 3.18
4344 8572 5.187186 ACACACCAAGTTAGTGGATAGGTAG 59.813 44.000 6.39 0.00 41.65 3.18
4345 8573 5.046878 CACACACCAAGTTAGTGGATAGGTA 60.047 44.000 6.39 0.00 41.65 3.08
4346 8574 3.908103 ACACACCAAGTTAGTGGATAGGT 59.092 43.478 6.39 0.00 41.65 3.08
4526 8754 2.362077 GTTTCTGTGCCTGTGGATTTGT 59.638 45.455 0.00 0.00 0.00 2.83
4589 8817 7.122715 AGGGTTTGCCAATTATGTCATAAGTA 58.877 34.615 10.89 0.00 36.17 2.24
4593 8821 7.417342 GCTTAAGGGTTTGCCAATTATGTCATA 60.417 37.037 4.29 0.00 36.17 2.15
4594 8822 6.630188 GCTTAAGGGTTTGCCAATTATGTCAT 60.630 38.462 4.29 0.00 36.17 3.06
4595 8823 5.337169 GCTTAAGGGTTTGCCAATTATGTCA 60.337 40.000 4.29 0.00 36.17 3.58
4596 8824 5.109210 GCTTAAGGGTTTGCCAATTATGTC 58.891 41.667 4.29 0.00 36.17 3.06
4597 8825 4.530161 TGCTTAAGGGTTTGCCAATTATGT 59.470 37.500 4.29 0.00 36.17 2.29
4598 8826 5.083533 TGCTTAAGGGTTTGCCAATTATG 57.916 39.130 4.29 0.00 36.17 1.90
4694 9372 8.591940 TCTGATAGTAATGATCCATCTTCCTTG 58.408 37.037 0.00 0.00 0.00 3.61
4711 9389 8.146053 TCCAAGAAAATTGGAGTCTGATAGTA 57.854 34.615 5.24 0.00 43.17 1.82
4745 11315 3.826729 AGGCCATTGTAGTTCAACTTTCC 59.173 43.478 5.01 0.00 38.97 3.13
4750 11320 3.681593 TGGTAGGCCATTGTAGTTCAAC 58.318 45.455 5.01 0.00 40.46 3.18
4833 11403 7.600375 TGTTTGATAAAGTTTTTGAAGTGTGCA 59.400 29.630 0.00 0.00 0.00 4.57
4955 11526 4.545610 GCACTTTGATCCATTTCGAAACA 58.454 39.130 13.81 3.23 0.00 2.83
4960 11531 3.941483 AGTAGGCACTTTGATCCATTTCG 59.059 43.478 0.00 0.00 41.75 3.46
4971 11542 0.035458 AGCAAGCGAGTAGGCACTTT 59.965 50.000 0.00 0.00 41.75 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.