Multiple sequence alignment - TraesCS5B01G254400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G254400 chr5B 100.000 5209 0 0 1 5209 437176584 437181792 0.000000e+00 9620.0
1 TraesCS5B01G254400 chr5B 96.154 130 5 0 4598 4727 267473025 267472896 4.090000e-51 213.0
2 TraesCS5B01G254400 chr5B 91.803 122 9 1 4737 4858 366475833 366475953 8.970000e-38 169.0
3 TraesCS5B01G254400 chr5D 95.520 3594 103 23 722 4302 368979932 368983480 0.000000e+00 5692.0
4 TraesCS5B01G254400 chr5D 82.411 2837 385 63 1367 4121 407980632 407983436 0.000000e+00 2370.0
5 TraesCS5B01G254400 chr5D 90.962 686 46 9 1 680 368979262 368979937 0.000000e+00 909.0
6 TraesCS5B01G254400 chr5D 91.623 191 15 1 4534 4724 368983818 368984007 4.000000e-66 263.0
7 TraesCS5B01G254400 chr5D 87.013 231 14 3 4301 4516 368983604 368983833 4.030000e-61 246.0
8 TraesCS5B01G254400 chr5D 83.858 254 38 3 2159 2412 407818017 407818267 6.740000e-59 239.0
9 TraesCS5B01G254400 chr5D 91.667 168 14 0 4937 5104 368995523 368995356 3.140000e-57 233.0
10 TraesCS5B01G254400 chr5D 90.341 176 17 0 4937 5112 420206043 420206218 1.130000e-56 231.0
11 TraesCS5B01G254400 chr5D 93.388 121 7 1 4741 4860 384339713 384339593 1.490000e-40 178.0
12 TraesCS5B01G254400 chr5D 92.208 77 5 1 4863 4938 368984036 368984112 1.980000e-19 108.0
13 TraesCS5B01G254400 chr5A 82.524 618 95 6 3489 4095 513708637 513709252 9.930000e-147 531.0
14 TraesCS5B01G254400 chr5A 81.471 340 47 11 2128 2457 513281659 513281992 1.110000e-66 265.0
15 TraesCS5B01G254400 chr4A 79.775 623 73 22 5 590 658407644 658407038 2.260000e-108 403.0
16 TraesCS5B01G254400 chr3B 92.135 178 13 1 4924 5101 54082899 54083075 3.110000e-62 250.0
17 TraesCS5B01G254400 chr3B 91.011 178 15 1 4924 5101 54158610 54158786 6.740000e-59 239.0
18 TraesCS5B01G254400 chr3B 93.478 138 9 0 4597 4734 481626835 481626698 6.840000e-49 206.0
19 TraesCS5B01G254400 chr3B 92.373 118 9 0 4738 4855 765875473 765875590 8.970000e-38 169.0
20 TraesCS5B01G254400 chr6D 91.716 169 14 0 4933 5101 142867206 142867038 8.720000e-58 235.0
21 TraesCS5B01G254400 chr2D 90.805 174 16 0 4937 5110 496634177 496634004 3.140000e-57 233.0
22 TraesCS5B01G254400 chr2D 90.751 173 16 0 4931 5103 560959655 560959483 1.130000e-56 231.0
23 TraesCS5B01G254400 chr2D 90.850 153 8 6 4590 4741 546779530 546779677 3.180000e-47 200.0
24 TraesCS5B01G254400 chr2D 95.161 62 3 0 5103 5164 73404317 73404378 1.190000e-16 99.0
25 TraesCS5B01G254400 chr4B 90.805 174 15 1 4937 5109 551079915 551080088 1.130000e-56 231.0
26 TraesCS5B01G254400 chr4B 94.161 137 6 2 4590 4724 89292687 89292823 1.900000e-49 207.0
27 TraesCS5B01G254400 chr4B 88.889 171 14 4 4594 4763 32425698 32425864 6.840000e-49 206.0
28 TraesCS5B01G254400 chr1D 88.889 189 16 5 4917 5105 178466486 178466303 1.460000e-55 228.0
29 TraesCS5B01G254400 chr6B 93.056 144 8 2 4598 4741 207511027 207510886 5.290000e-50 209.0
30 TraesCS5B01G254400 chr6B 92.373 118 9 0 4737 4854 43070942 43070825 8.970000e-38 169.0
31 TraesCS5B01G254400 chr3A 94.776 134 7 0 4593 4726 741679786 741679919 5.290000e-50 209.0
32 TraesCS5B01G254400 chr1B 92.053 151 9 3 4594 4743 332086462 332086314 5.290000e-50 209.0
33 TraesCS5B01G254400 chrUn 93.913 115 7 0 4741 4855 33028290 33028176 1.930000e-39 174.0
34 TraesCS5B01G254400 chrUn 85.294 170 22 3 4558 4724 52994607 52994438 6.930000e-39 172.0
35 TraesCS5B01G254400 chr7B 92.437 119 9 0 4737 4855 743210184 743210302 2.490000e-38 171.0
36 TraesCS5B01G254400 chr7B 91.057 123 11 0 4738 4860 201454844 201454966 3.230000e-37 167.0
37 TraesCS5B01G254400 chr7B 90.476 126 11 1 4732 4857 540730668 540730544 1.160000e-36 165.0
38 TraesCS5B01G254400 chr2B 93.043 115 8 0 4741 4855 666102905 666102791 8.970000e-38 169.0
39 TraesCS5B01G254400 chr3D 90.667 75 3 2 5101 5171 417956384 417956310 4.290000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G254400 chr5B 437176584 437181792 5208 False 9620.0 9620 100.0000 1 5209 1 chr5B.!!$F2 5208
1 TraesCS5B01G254400 chr5D 407980632 407983436 2804 False 2370.0 2370 82.4110 1367 4121 1 chr5D.!!$F2 2754
2 TraesCS5B01G254400 chr5D 368979262 368984112 4850 False 1443.6 5692 91.4652 1 4938 5 chr5D.!!$F4 4937
3 TraesCS5B01G254400 chr5A 513708637 513709252 615 False 531.0 531 82.5240 3489 4095 1 chr5A.!!$F2 606
4 TraesCS5B01G254400 chr4A 658407038 658407644 606 True 403.0 403 79.7750 5 590 1 chr4A.!!$R1 585

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 670 0.039035 GGATGGGGGTGTGTTAGCAA 59.961 55.0 0.00 0.0 0.00 3.91 F
990 1027 0.115349 ATATAGCTGCCCCGGACTCT 59.885 55.0 0.73 0.0 0.00 3.24 F
1693 1745 0.463620 TGGCGGATGATGACGATGAA 59.536 50.0 0.00 0.0 0.00 2.57 F
2007 2059 0.321122 GATAAGGAGGAGCGGCATGG 60.321 60.0 1.45 0.0 0.00 3.66 F
3734 3856 0.877071 AAGCCGCAATCAGTGTGAAG 59.123 50.0 0.00 0.0 40.42 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1778 1830 0.396695 CCCCTAGAGGTGTCCGCTAA 60.397 60.000 0.00 0.00 35.62 3.09 R
1887 1939 1.011595 TTCCTCCTCCTCCAGTAGCT 58.988 55.000 0.00 0.00 0.00 3.32 R
2748 2827 1.870402 CAATGAAGCCGTGTGTGTACA 59.130 47.619 0.00 0.00 0.00 2.90 R
3866 3988 0.433492 CTACACGGCGTGAAAACTCG 59.567 55.000 42.65 17.26 36.96 4.18 R
5175 5446 0.028770 GATCTGAGACGACGAGCAGG 59.971 60.000 0.00 0.00 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 8.270080 TGCCACTTGTTATCGAATATGTTAAA 57.730 30.769 0.00 0.00 0.00 1.52
123 124 0.192566 TCCTCCTGTGGGTAAGGTGT 59.807 55.000 0.00 0.00 36.14 4.16
186 188 0.182061 GCCTCAGGGATGATCTTGCA 59.818 55.000 0.00 0.00 33.58 4.08
193 195 1.133790 GGGATGATCTTGCAGCACAAC 59.866 52.381 0.00 0.00 33.68 3.32
195 197 0.806868 ATGATCTTGCAGCACAACGG 59.193 50.000 0.00 0.00 33.68 4.44
203 205 1.600636 CAGCACAACGGTGGGACAT 60.601 57.895 7.05 0.00 45.38 3.06
213 215 2.241176 ACGGTGGGACATTCATATTGGT 59.759 45.455 0.00 0.00 44.52 3.67
250 252 8.780846 ATTTGTTCAATTGTAATGATGCACAT 57.219 26.923 5.13 0.00 41.45 3.21
287 305 4.409718 TGCCTCTTGTACTACAACACAA 57.590 40.909 0.00 0.00 33.96 3.33
288 306 4.968259 TGCCTCTTGTACTACAACACAAT 58.032 39.130 0.00 0.00 33.96 2.71
307 326 1.519455 GAGCTTCCGGTCATCGTGG 60.519 63.158 0.00 0.00 37.59 4.94
334 364 8.682710 AGTCAGACACTATCTATCTTCAAAGAC 58.317 37.037 2.66 0.00 34.68 3.01
354 386 1.666311 CGAGTCTCTTTCGGTCACCAC 60.666 57.143 0.00 0.00 34.56 4.16
386 418 1.906990 CCATGGAGATCATTGCCCTC 58.093 55.000 5.56 0.00 32.92 4.30
457 493 1.734465 GTTGCAGATTGCTTAGCGAGT 59.266 47.619 0.00 0.00 45.31 4.18
462 498 3.370978 GCAGATTGCTTAGCGAGTTACAA 59.629 43.478 0.00 0.00 40.96 2.41
483 519 4.844349 ACCCTACTGAATGTAGCACAAT 57.156 40.909 0.00 0.00 45.44 2.71
575 611 8.712285 TTTGGAATATAACTCTTGTTACTCCG 57.288 34.615 0.00 0.00 40.91 4.63
610 646 6.994421 AACAAGTGAGAAATAAATTGGGGT 57.006 33.333 0.00 0.00 0.00 4.95
611 647 6.345096 ACAAGTGAGAAATAAATTGGGGTG 57.655 37.500 0.00 0.00 0.00 4.61
630 666 1.931705 GGGGGATGGGGGTGTGTTA 60.932 63.158 0.00 0.00 0.00 2.41
631 667 1.613061 GGGGATGGGGGTGTGTTAG 59.387 63.158 0.00 0.00 0.00 2.34
632 668 1.076995 GGGATGGGGGTGTGTTAGC 60.077 63.158 0.00 0.00 0.00 3.09
633 669 1.688811 GGATGGGGGTGTGTTAGCA 59.311 57.895 0.00 0.00 0.00 3.49
634 670 0.039035 GGATGGGGGTGTGTTAGCAA 59.961 55.000 0.00 0.00 0.00 3.91
635 671 1.463674 GATGGGGGTGTGTTAGCAAG 58.536 55.000 0.00 0.00 0.00 4.01
636 672 0.777446 ATGGGGGTGTGTTAGCAAGT 59.223 50.000 0.00 0.00 0.00 3.16
637 673 0.553819 TGGGGGTGTGTTAGCAAGTT 59.446 50.000 0.00 0.00 0.00 2.66
638 674 1.063567 TGGGGGTGTGTTAGCAAGTTT 60.064 47.619 0.00 0.00 0.00 2.66
696 732 9.311676 ACTATTATTACTCCTTTAGCTAGGTCC 57.688 37.037 0.00 0.00 36.63 4.46
697 733 9.536510 CTATTATTACTCCTTTAGCTAGGTCCT 57.463 37.037 0.00 0.00 36.63 3.85
698 734 8.800515 ATTATTACTCCTTTAGCTAGGTCCTT 57.199 34.615 0.00 0.00 36.63 3.36
699 735 5.934402 TTACTCCTTTAGCTAGGTCCTTG 57.066 43.478 0.00 0.00 36.63 3.61
700 736 3.108376 ACTCCTTTAGCTAGGTCCTTGG 58.892 50.000 0.00 0.00 36.63 3.61
701 737 2.436173 CTCCTTTAGCTAGGTCCTTGGG 59.564 54.545 0.00 0.00 36.63 4.12
702 738 2.045326 TCCTTTAGCTAGGTCCTTGGGA 59.955 50.000 0.00 0.00 36.63 4.37
703 739 2.844348 CCTTTAGCTAGGTCCTTGGGAA 59.156 50.000 0.00 0.00 31.38 3.97
704 740 3.118223 CCTTTAGCTAGGTCCTTGGGAAG 60.118 52.174 0.00 0.00 31.38 3.46
705 741 1.497161 TAGCTAGGTCCTTGGGAAGC 58.503 55.000 0.00 0.00 34.38 3.86
706 742 1.224870 GCTAGGTCCTTGGGAAGCC 59.775 63.158 0.00 0.00 29.60 4.35
707 743 1.275421 GCTAGGTCCTTGGGAAGCCT 61.275 60.000 0.00 2.14 33.54 4.58
708 744 1.290134 CTAGGTCCTTGGGAAGCCTT 58.710 55.000 0.00 0.00 31.73 4.35
709 745 1.636003 CTAGGTCCTTGGGAAGCCTTT 59.364 52.381 0.00 0.00 31.73 3.11
710 746 0.405973 AGGTCCTTGGGAAGCCTTTC 59.594 55.000 0.00 0.00 31.38 2.62
711 747 0.405973 GGTCCTTGGGAAGCCTTTCT 59.594 55.000 0.00 0.00 31.38 2.52
712 748 1.614583 GGTCCTTGGGAAGCCTTTCTC 60.615 57.143 0.00 0.00 34.20 2.87
713 749 0.324943 TCCTTGGGAAGCCTTTCTCG 59.675 55.000 0.00 0.00 36.54 4.04
714 750 0.324943 CCTTGGGAAGCCTTTCTCGA 59.675 55.000 0.00 0.00 36.54 4.04
715 751 1.677217 CCTTGGGAAGCCTTTCTCGAG 60.677 57.143 5.93 5.93 42.71 4.04
716 752 1.002544 CTTGGGAAGCCTTTCTCGAGT 59.997 52.381 13.13 0.00 39.54 4.18
717 753 0.608640 TGGGAAGCCTTTCTCGAGTC 59.391 55.000 13.13 0.00 36.54 3.36
718 754 0.458716 GGGAAGCCTTTCTCGAGTCG 60.459 60.000 13.13 6.09 33.68 4.18
719 755 0.526662 GGAAGCCTTTCTCGAGTCGA 59.473 55.000 15.64 15.64 33.68 4.20
938 975 7.220740 TGGCACGAGACCAATATATTATTTCA 58.779 34.615 0.00 0.00 33.12 2.69
948 985 7.878127 ACCAATATATTATTTCAGTCGTGGAGG 59.122 37.037 0.00 0.00 0.00 4.30
976 1013 3.406764 GCTCAAAGCCCTGGACATATAG 58.593 50.000 0.00 0.00 34.48 1.31
989 1026 0.247736 CATATAGCTGCCCCGGACTC 59.752 60.000 0.73 0.00 0.00 3.36
990 1027 0.115349 ATATAGCTGCCCCGGACTCT 59.885 55.000 0.73 0.00 0.00 3.24
991 1028 0.775542 TATAGCTGCCCCGGACTCTA 59.224 55.000 0.73 1.48 0.00 2.43
992 1029 0.115349 ATAGCTGCCCCGGACTCTAT 59.885 55.000 0.73 3.79 0.00 1.98
998 1035 1.957562 CCCCGGACTCTATGCTACG 59.042 63.158 0.73 0.00 0.00 3.51
1020 1057 2.672996 CCCTGCGGAGGTGTTTGG 60.673 66.667 22.54 0.79 37.73 3.28
1103 1140 4.714632 ACGAAGAATCCAGTCCAGAAAAA 58.285 39.130 0.00 0.00 0.00 1.94
1120 1157 2.889170 AAAGAAAGAAGGGAGAGGGC 57.111 50.000 0.00 0.00 0.00 5.19
1147 1184 1.819632 GCGGCGGTGAATCCAGATT 60.820 57.895 9.78 0.00 35.57 2.40
1185 1228 2.811317 CGAGTCTTGTGAGCCGGC 60.811 66.667 21.89 21.89 0.00 6.13
1213 1256 0.758734 CTGTGGCGGGGAAGATATCA 59.241 55.000 5.32 0.00 0.00 2.15
1587 1636 2.844369 AGAGGAGGAAGCAAGGAGAAT 58.156 47.619 0.00 0.00 0.00 2.40
1595 1644 4.904251 AGGAAGCAAGGAGAATGATAGCTA 59.096 41.667 0.00 0.00 0.00 3.32
1647 1696 1.360852 AGTCTGTGATCAGGAGGAGGT 59.639 52.381 0.00 0.00 41.59 3.85
1693 1745 0.463620 TGGCGGATGATGACGATGAA 59.536 50.000 0.00 0.00 0.00 2.57
1751 1803 5.942236 GCATATGATCCAGCCTTTATTCTCA 59.058 40.000 6.97 0.00 0.00 3.27
1778 1830 1.671328 ACACGATGACGACGATGATCT 59.329 47.619 0.00 0.00 42.66 2.75
1787 1839 1.002792 CGACGATGATCTTAGCGGACA 60.003 52.381 0.00 0.00 33.06 4.02
1790 1842 1.338337 CGATGATCTTAGCGGACACCT 59.662 52.381 0.00 0.00 0.00 4.00
1859 1911 2.298729 AGTGGACAGCAGAAGAAGAGAC 59.701 50.000 0.00 0.00 0.00 3.36
1869 1921 6.873076 CAGCAGAAGAAGAGACTTAATCTGTT 59.127 38.462 18.28 13.61 43.46 3.16
1887 1939 7.587037 ATCTGTTGACTGAAGAATTTTTGGA 57.413 32.000 0.00 0.00 0.00 3.53
1911 1963 0.325110 CTGGAGGAGGAGGAAGCAGA 60.325 60.000 0.00 0.00 0.00 4.26
1965 2017 0.698238 AATGCCTACCAAGCCTGTGA 59.302 50.000 0.00 0.00 0.00 3.58
2007 2059 0.321122 GATAAGGAGGAGCGGCATGG 60.321 60.000 1.45 0.00 0.00 3.66
2266 2324 5.525012 TGACCTGTCGATTGATGAAATGATC 59.475 40.000 0.00 0.00 0.00 2.92
2412 2470 3.574826 GACAAGACCAGTAAGTGTCCTCT 59.425 47.826 0.00 0.00 33.95 3.69
2470 2539 7.614583 TCTTAATAGCATACGCCTCCTATTAGT 59.385 37.037 0.00 0.00 39.83 2.24
2471 2540 8.812513 TTAATAGCATACGCCTCCTATTAGTA 57.187 34.615 0.00 0.00 39.83 1.82
2504 2576 1.434287 CGCTATTTGCCATGCAGCA 59.566 52.632 0.00 0.00 40.61 4.41
2592 2667 7.674120 TCTTCAGATCTTCTCAATCAAAGTCA 58.326 34.615 0.00 0.00 0.00 3.41
2748 2827 5.435686 TTGTTATCCTTGCTACTCCATGT 57.564 39.130 0.00 0.00 0.00 3.21
2775 2854 1.899814 ACACGGCTTCATTGGTCTCTA 59.100 47.619 0.00 0.00 0.00 2.43
3048 3134 5.189928 TCCGTGCATGAATACTATTTGGTT 58.810 37.500 7.72 0.00 0.00 3.67
3077 3173 7.885297 TGTTCAGCTAACTTCAATTATTTGCT 58.115 30.769 0.00 0.00 38.99 3.91
3079 3175 9.196552 GTTCAGCTAACTTCAATTATTTGCTTT 57.803 29.630 0.00 0.00 33.13 3.51
3093 3189 2.869233 TGCTTTCAAGTCTGGTTTGC 57.131 45.000 0.00 0.00 0.00 3.68
3131 3229 9.601217 AGACATATCTGTTATGGTTTACACTTC 57.399 33.333 9.78 0.00 41.80 3.01
3145 3243 6.018994 GGTTTACACTTCCATTATGCTACTCG 60.019 42.308 0.00 0.00 0.00 4.18
3148 3246 4.159693 ACACTTCCATTATGCTACTCGACA 59.840 41.667 0.00 0.00 0.00 4.35
3152 3250 6.823689 ACTTCCATTATGCTACTCGACATTTT 59.176 34.615 0.00 0.00 0.00 1.82
3197 3295 8.415950 TGTTAATTTAGCTTCCTTCCATCAAA 57.584 30.769 0.00 0.00 0.00 2.69
3222 3344 8.752766 ACTTAAATTGCTGTGATGATTTGAAG 57.247 30.769 0.00 0.00 0.00 3.02
3374 3496 5.745227 AGAAGTGGTTCATGTATAGGTTGG 58.255 41.667 0.00 0.00 34.82 3.77
3405 3527 4.543590 TTGTCAAAATGGTGTGGTTTGT 57.456 36.364 0.00 0.00 34.55 2.83
3734 3856 0.877071 AAGCCGCAATCAGTGTGAAG 59.123 50.000 0.00 0.00 40.42 3.02
3827 3949 4.370917 TGGAAATCTTGTTGCTTGCTTTC 58.629 39.130 0.00 0.00 0.00 2.62
3846 3968 5.643379 TTTCAAAGGTGATAGATTGCCAC 57.357 39.130 0.00 0.00 32.48 5.01
3866 3988 4.884164 CCACTTGATGGTAAAGGAAGGATC 59.116 45.833 0.00 0.00 44.46 3.36
3893 4015 2.430244 CGCCGTGTAGTCAGCGTT 60.430 61.111 0.00 0.00 43.45 4.84
4025 4156 8.277918 AGCAAGGAGAATATTAAGATTGGTTCT 58.722 33.333 0.00 0.00 35.70 3.01
4089 4220 7.848051 CGAGTTGCAAGTTTGACTATGATAATC 59.152 37.037 8.48 0.00 0.00 1.75
4141 4272 3.269178 GTTCTCTTCTCTGGCAATCTGG 58.731 50.000 0.00 0.00 0.00 3.86
4142 4273 1.209019 TCTCTTCTCTGGCAATCTGGC 59.791 52.381 0.00 0.00 44.03 4.85
4193 4324 8.057011 TGTTATAGTCCAGTGGTACTCTAATGA 58.943 37.037 9.54 4.16 0.00 2.57
4215 4346 3.541632 ACGGTTGTCAAGTTGTCTGAAT 58.458 40.909 2.11 0.00 0.00 2.57
4217 4348 4.201910 ACGGTTGTCAAGTTGTCTGAATTG 60.202 41.667 2.11 0.00 0.00 2.32
4291 4422 5.994250 AGTATCAATTGCTGCCTCTAAAGA 58.006 37.500 0.00 0.00 0.00 2.52
4302 4433 6.042552 TGCTGCCTCTAAAGAGAAGCTTATAT 59.957 38.462 23.51 0.00 44.65 0.86
4371 4627 2.265739 GACGGCACAGCATCCTCA 59.734 61.111 0.00 0.00 0.00 3.86
4383 4654 3.318275 CAGCATCCTCATCCCTTTCATTG 59.682 47.826 0.00 0.00 0.00 2.82
4400 4671 8.445493 CCTTTCATTGAAGCAAAATTTACATCC 58.555 33.333 0.00 0.00 0.00 3.51
4404 4675 3.256879 TGAAGCAAAATTTACATCCGGCA 59.743 39.130 0.00 0.00 0.00 5.69
4407 4678 2.348362 GCAAAATTTACATCCGGCAAGC 59.652 45.455 0.00 0.00 0.00 4.01
4446 4717 2.268920 CGTGTGGGCCTGTATGCT 59.731 61.111 4.53 0.00 0.00 3.79
4456 4727 1.672737 GCCTGTATGCTTTGTTTGGGC 60.673 52.381 0.00 0.00 0.00 5.36
4461 4732 3.615709 GCTTTGTTTGGGCGGCCT 61.616 61.111 29.87 0.00 0.00 5.19
4476 4747 1.544825 GGCCTCACTGTGAGCTGGTA 61.545 60.000 28.14 0.00 42.98 3.25
4484 4755 0.250295 TGTGAGCTGGTAGTGTTGGC 60.250 55.000 0.00 0.00 0.00 4.52
4502 4773 3.847671 GGCTTATTAGGCCTTCTCAGT 57.152 47.619 12.58 0.00 45.57 3.41
4503 4774 4.157849 GGCTTATTAGGCCTTCTCAGTT 57.842 45.455 12.58 0.00 45.57 3.16
4504 4775 5.291905 GGCTTATTAGGCCTTCTCAGTTA 57.708 43.478 12.58 0.00 45.57 2.24
4505 4776 5.301555 GGCTTATTAGGCCTTCTCAGTTAG 58.698 45.833 12.58 0.00 45.57 2.34
4506 4777 5.301555 GCTTATTAGGCCTTCTCAGTTAGG 58.698 45.833 12.58 0.00 34.54 2.69
4507 4778 5.743422 GCTTATTAGGCCTTCTCAGTTAGGG 60.743 48.000 12.58 0.00 31.95 3.53
4508 4779 2.176247 TAGGCCTTCTCAGTTAGGGG 57.824 55.000 12.58 0.00 31.95 4.79
4509 4780 0.119358 AGGCCTTCTCAGTTAGGGGT 59.881 55.000 0.00 0.00 31.95 4.95
4510 4781 0.542333 GGCCTTCTCAGTTAGGGGTC 59.458 60.000 0.00 0.00 31.95 4.46
4511 4782 1.276622 GCCTTCTCAGTTAGGGGTCA 58.723 55.000 0.00 0.00 31.95 4.02
4512 4783 1.628846 GCCTTCTCAGTTAGGGGTCAA 59.371 52.381 0.00 0.00 31.95 3.18
4513 4784 2.039879 GCCTTCTCAGTTAGGGGTCAAA 59.960 50.000 0.00 0.00 31.95 2.69
4514 4785 3.676093 CCTTCTCAGTTAGGGGTCAAAC 58.324 50.000 0.00 0.00 0.00 2.93
4515 4786 3.328050 CCTTCTCAGTTAGGGGTCAAACT 59.672 47.826 0.00 0.00 36.38 2.66
4522 4793 5.167303 AGTTAGGGGTCAAACTGATTCTC 57.833 43.478 0.00 0.00 34.70 2.87
4523 4794 2.770164 AGGGGTCAAACTGATTCTCG 57.230 50.000 0.00 0.00 0.00 4.04
4524 4795 2.257207 AGGGGTCAAACTGATTCTCGA 58.743 47.619 0.00 0.00 0.00 4.04
4525 4796 2.637872 AGGGGTCAAACTGATTCTCGAA 59.362 45.455 0.00 0.00 0.00 3.71
4526 4797 3.072476 AGGGGTCAAACTGATTCTCGAAA 59.928 43.478 0.00 0.00 0.00 3.46
4527 4798 3.818773 GGGGTCAAACTGATTCTCGAAAA 59.181 43.478 0.00 0.00 0.00 2.29
4528 4799 4.277423 GGGGTCAAACTGATTCTCGAAAAA 59.723 41.667 0.00 0.00 0.00 1.94
4626 4897 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
4633 4904 6.035843 CCGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
4644 4915 5.104982 TGTCATCAAAATGGATAAAAGGGGC 60.105 40.000 0.00 0.00 33.42 5.80
4704 4975 9.958180 TCTTTCTATCCATTTTGATGACAAGTA 57.042 29.630 0.00 0.00 37.32 2.24
4715 4986 9.865321 ATTTTGATGACAAGTATTTTCTGATGG 57.135 29.630 0.00 0.00 37.32 3.51
4716 4987 8.634335 TTTGATGACAAGTATTTTCTGATGGA 57.366 30.769 0.00 0.00 37.32 3.41
4719 4990 5.500234 TGACAAGTATTTTCTGATGGAGGG 58.500 41.667 0.00 0.00 0.00 4.30
4720 4991 5.250543 TGACAAGTATTTTCTGATGGAGGGA 59.749 40.000 0.00 0.00 0.00 4.20
4721 4992 5.749462 ACAAGTATTTTCTGATGGAGGGAG 58.251 41.667 0.00 0.00 0.00 4.30
4722 4993 5.251700 ACAAGTATTTTCTGATGGAGGGAGT 59.748 40.000 0.00 0.00 0.00 3.85
4723 4994 6.443849 ACAAGTATTTTCTGATGGAGGGAGTA 59.556 38.462 0.00 0.00 0.00 2.59
4724 4995 6.739331 AGTATTTTCTGATGGAGGGAGTAG 57.261 41.667 0.00 0.00 0.00 2.57
4725 4996 6.206042 AGTATTTTCTGATGGAGGGAGTAGT 58.794 40.000 0.00 0.00 0.00 2.73
4726 4997 7.363031 AGTATTTTCTGATGGAGGGAGTAGTA 58.637 38.462 0.00 0.00 0.00 1.82
4727 4998 8.013667 AGTATTTTCTGATGGAGGGAGTAGTAT 58.986 37.037 0.00 0.00 0.00 2.12
4728 4999 9.310449 GTATTTTCTGATGGAGGGAGTAGTATA 57.690 37.037 0.00 0.00 0.00 1.47
4729 5000 8.980832 ATTTTCTGATGGAGGGAGTAGTATAT 57.019 34.615 0.00 0.00 0.00 0.86
4731 5002 9.892444 TTTTCTGATGGAGGGAGTAGTATATAA 57.108 33.333 0.00 0.00 0.00 0.98
4732 5003 9.535170 TTTCTGATGGAGGGAGTAGTATATAAG 57.465 37.037 0.00 0.00 0.00 1.73
4733 5004 8.233349 TCTGATGGAGGGAGTAGTATATAAGT 57.767 38.462 0.00 0.00 0.00 2.24
4735 5006 9.398538 CTGATGGAGGGAGTAGTATATAAGTAC 57.601 40.741 0.00 0.00 34.64 2.73
4736 5007 8.045507 TGATGGAGGGAGTAGTATATAAGTACG 58.954 40.741 0.00 0.00 38.78 3.67
4737 5008 7.321717 TGGAGGGAGTAGTATATAAGTACGT 57.678 40.000 0.00 0.00 38.78 3.57
4739 5010 9.051259 TGGAGGGAGTAGTATATAAGTACGTAT 57.949 37.037 0.00 6.56 38.78 3.06
4740 5011 9.898152 GGAGGGAGTAGTATATAAGTACGTATT 57.102 37.037 6.63 0.00 38.78 1.89
4742 5013 9.898152 AGGGAGTAGTATATAAGTACGTATTCC 57.102 37.037 6.63 5.91 38.78 3.01
4743 5014 9.114952 GGGAGTAGTATATAAGTACGTATTCCC 57.885 40.741 13.36 13.36 38.78 3.97
4747 5018 7.856145 AGTATATAAGTACGTATTCCCTCCG 57.144 40.000 6.63 0.00 0.00 4.63
4748 5019 7.398024 AGTATATAAGTACGTATTCCCTCCGT 58.602 38.462 6.63 0.00 38.53 4.69
4749 5020 6.749923 ATATAAGTACGTATTCCCTCCGTC 57.250 41.667 6.63 0.00 36.12 4.79
4750 5021 1.685148 AGTACGTATTCCCTCCGTCC 58.315 55.000 0.00 0.00 36.12 4.79
4751 5022 1.064463 AGTACGTATTCCCTCCGTCCA 60.064 52.381 0.00 0.00 36.12 4.02
4754 5025 1.108776 CGTATTCCCTCCGTCCAGAA 58.891 55.000 0.00 0.00 0.00 3.02
4755 5026 1.479323 CGTATTCCCTCCGTCCAGAAA 59.521 52.381 0.00 0.00 0.00 2.52
4756 5027 2.102588 CGTATTCCCTCCGTCCAGAAAT 59.897 50.000 0.00 0.00 0.00 2.17
4757 5028 3.319972 CGTATTCCCTCCGTCCAGAAATA 59.680 47.826 0.00 0.00 0.00 1.40
4758 5029 3.840124 ATTCCCTCCGTCCAGAAATAC 57.160 47.619 0.00 0.00 0.00 1.89
4759 5030 2.544844 TCCCTCCGTCCAGAAATACT 57.455 50.000 0.00 0.00 0.00 2.12
4760 5031 2.829023 TCCCTCCGTCCAGAAATACTT 58.171 47.619 0.00 0.00 0.00 2.24
4761 5032 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
4762 5033 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
4763 5034 3.307480 CCCTCCGTCCAGAAATACTTGTT 60.307 47.826 0.00 0.00 0.00 2.83
4764 5035 3.684788 CCTCCGTCCAGAAATACTTGTTG 59.315 47.826 0.00 0.00 0.00 3.33
4765 5036 3.670625 TCCGTCCAGAAATACTTGTTGG 58.329 45.455 0.00 0.00 0.00 3.77
4766 5037 3.325425 TCCGTCCAGAAATACTTGTTGGA 59.675 43.478 0.00 0.00 35.67 3.53
4767 5038 3.684788 CCGTCCAGAAATACTTGTTGGAG 59.315 47.826 0.00 0.00 38.53 3.86
4768 5039 4.562757 CCGTCCAGAAATACTTGTTGGAGA 60.563 45.833 0.00 0.00 38.53 3.71
4769 5040 4.994852 CGTCCAGAAATACTTGTTGGAGAA 59.005 41.667 0.00 0.00 38.53 2.87
4770 5041 5.468746 CGTCCAGAAATACTTGTTGGAGAAA 59.531 40.000 0.00 0.00 38.53 2.52
4771 5042 6.149474 CGTCCAGAAATACTTGTTGGAGAAAT 59.851 38.462 0.00 0.00 38.53 2.17
4772 5043 7.308435 GTCCAGAAATACTTGTTGGAGAAATG 58.692 38.462 0.00 0.00 38.53 2.32
4773 5044 6.071952 TCCAGAAATACTTGTTGGAGAAATGC 60.072 38.462 0.00 0.00 33.21 3.56
4774 5045 6.294675 CCAGAAATACTTGTTGGAGAAATGCA 60.295 38.462 0.00 0.00 0.00 3.96
4775 5046 7.318141 CAGAAATACTTGTTGGAGAAATGCAT 58.682 34.615 0.00 0.00 0.00 3.96
4776 5047 8.461222 CAGAAATACTTGTTGGAGAAATGCATA 58.539 33.333 0.00 0.00 0.00 3.14
4777 5048 9.023962 AGAAATACTTGTTGGAGAAATGCATAA 57.976 29.630 0.00 0.00 0.00 1.90
4778 5049 9.638239 GAAATACTTGTTGGAGAAATGCATAAA 57.362 29.630 0.00 0.00 0.00 1.40
4779 5050 9.995003 AAATACTTGTTGGAGAAATGCATAAAA 57.005 25.926 0.00 0.00 0.00 1.52
4780 5051 9.995003 AATACTTGTTGGAGAAATGCATAAAAA 57.005 25.926 0.00 0.00 0.00 1.94
4783 5054 9.995003 ACTTGTTGGAGAAATGCATAAAAATAA 57.005 25.926 0.00 0.00 0.00 1.40
4828 5099 8.267620 ACATTTAGATACATCCATTCCTCTGA 57.732 34.615 0.00 0.00 0.00 3.27
4829 5100 8.153550 ACATTTAGATACATCCATTCCTCTGAC 58.846 37.037 0.00 0.00 0.00 3.51
4830 5101 4.862902 AGATACATCCATTCCTCTGACG 57.137 45.455 0.00 0.00 0.00 4.35
4831 5102 4.474394 AGATACATCCATTCCTCTGACGA 58.526 43.478 0.00 0.00 0.00 4.20
4832 5103 4.522405 AGATACATCCATTCCTCTGACGAG 59.478 45.833 0.00 0.00 37.01 4.18
4833 5104 2.461695 ACATCCATTCCTCTGACGAGT 58.538 47.619 0.00 0.00 35.43 4.18
4834 5105 3.632333 ACATCCATTCCTCTGACGAGTA 58.368 45.455 0.00 0.00 35.43 2.59
4835 5106 4.219115 ACATCCATTCCTCTGACGAGTAT 58.781 43.478 0.00 0.00 35.43 2.12
4836 5107 4.651503 ACATCCATTCCTCTGACGAGTATT 59.348 41.667 0.00 0.00 35.43 1.89
4837 5108 5.129485 ACATCCATTCCTCTGACGAGTATTT 59.871 40.000 0.00 0.00 35.43 1.40
4838 5109 5.677319 TCCATTCCTCTGACGAGTATTTT 57.323 39.130 0.00 0.00 35.43 1.82
4839 5110 5.661458 TCCATTCCTCTGACGAGTATTTTC 58.339 41.667 0.00 0.00 35.43 2.29
4840 5111 4.504461 CCATTCCTCTGACGAGTATTTTCG 59.496 45.833 0.00 0.00 45.70 3.46
4841 5112 3.777465 TCCTCTGACGAGTATTTTCGG 57.223 47.619 0.00 0.00 44.57 4.30
4842 5113 3.349927 TCCTCTGACGAGTATTTTCGGA 58.650 45.455 0.00 0.00 44.57 4.55
4843 5114 3.128242 TCCTCTGACGAGTATTTTCGGAC 59.872 47.826 0.00 0.00 44.57 4.79
4844 5115 3.099362 CTCTGACGAGTATTTTCGGACG 58.901 50.000 0.00 0.00 44.57 4.79
4845 5116 2.159476 TCTGACGAGTATTTTCGGACGG 60.159 50.000 0.00 0.16 44.57 4.79
4846 5117 1.811965 TGACGAGTATTTTCGGACGGA 59.188 47.619 0.00 0.00 44.57 4.69
4847 5118 2.159476 TGACGAGTATTTTCGGACGGAG 60.159 50.000 0.00 0.00 44.57 4.63
4848 5119 1.133790 ACGAGTATTTTCGGACGGAGG 59.866 52.381 0.00 0.00 44.57 4.30
4849 5120 1.535437 CGAGTATTTTCGGACGGAGGG 60.535 57.143 0.00 0.00 36.95 4.30
4850 5121 1.753073 GAGTATTTTCGGACGGAGGGA 59.247 52.381 0.00 0.00 0.00 4.20
4851 5122 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
4852 5123 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
4853 5124 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
4854 5125 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
4855 5126 0.251297 TTTCGGACGGAGGGAGTACA 60.251 55.000 0.00 0.00 0.00 2.90
4856 5127 0.033796 TTCGGACGGAGGGAGTACAT 60.034 55.000 0.00 0.00 0.00 2.29
4857 5128 0.839277 TCGGACGGAGGGAGTACATA 59.161 55.000 0.00 0.00 0.00 2.29
4858 5129 1.422781 TCGGACGGAGGGAGTACATAT 59.577 52.381 0.00 0.00 0.00 1.78
4859 5130 2.639347 TCGGACGGAGGGAGTACATATA 59.361 50.000 0.00 0.00 0.00 0.86
4860 5131 3.072915 TCGGACGGAGGGAGTACATATAA 59.927 47.826 0.00 0.00 0.00 0.98
4861 5132 3.190118 CGGACGGAGGGAGTACATATAAC 59.810 52.174 0.00 0.00 0.00 1.89
4862 5133 3.190118 GGACGGAGGGAGTACATATAACG 59.810 52.174 0.00 0.00 0.00 3.18
4863 5134 3.152341 ACGGAGGGAGTACATATAACGG 58.848 50.000 0.00 0.00 0.00 4.44
4864 5135 3.181440 ACGGAGGGAGTACATATAACGGA 60.181 47.826 0.00 0.00 0.00 4.69
4911 5182 2.554032 GCCGGGTTTAGGATTGATGATG 59.446 50.000 2.18 0.00 0.00 3.07
4916 5187 6.320164 CCGGGTTTAGGATTGATGATGTAAAA 59.680 38.462 0.00 0.00 0.00 1.52
4926 5197 8.853126 GGATTGATGATGTAAAAGATGGATCAA 58.147 33.333 0.00 0.00 34.16 2.57
4940 5211 7.823745 AGATGGATCAATTAACAACATACCC 57.176 36.000 0.00 0.00 0.00 3.69
4941 5212 6.777580 AGATGGATCAATTAACAACATACCCC 59.222 38.462 0.00 0.00 0.00 4.95
4942 5213 5.205056 TGGATCAATTAACAACATACCCCC 58.795 41.667 0.00 0.00 0.00 5.40
4943 5214 5.043732 TGGATCAATTAACAACATACCCCCT 60.044 40.000 0.00 0.00 0.00 4.79
4944 5215 5.535030 GGATCAATTAACAACATACCCCCTC 59.465 44.000 0.00 0.00 0.00 4.30
4945 5216 4.862371 TCAATTAACAACATACCCCCTCC 58.138 43.478 0.00 0.00 0.00 4.30
4946 5217 3.570912 ATTAACAACATACCCCCTCCG 57.429 47.619 0.00 0.00 0.00 4.63
4947 5218 1.955451 TAACAACATACCCCCTCCGT 58.045 50.000 0.00 0.00 0.00 4.69
4948 5219 1.069775 AACAACATACCCCCTCCGTT 58.930 50.000 0.00 0.00 0.00 4.44
4949 5220 0.616891 ACAACATACCCCCTCCGTTC 59.383 55.000 0.00 0.00 0.00 3.95
4950 5221 0.107361 CAACATACCCCCTCCGTTCC 60.107 60.000 0.00 0.00 0.00 3.62
4951 5222 0.253020 AACATACCCCCTCCGTTCCT 60.253 55.000 0.00 0.00 0.00 3.36
4952 5223 0.638292 ACATACCCCCTCCGTTCCTA 59.362 55.000 0.00 0.00 0.00 2.94
4953 5224 1.008693 ACATACCCCCTCCGTTCCTAA 59.991 52.381 0.00 0.00 0.00 2.69
4954 5225 2.121129 CATACCCCCTCCGTTCCTAAA 58.879 52.381 0.00 0.00 0.00 1.85
4955 5226 2.574074 TACCCCCTCCGTTCCTAAAT 57.426 50.000 0.00 0.00 0.00 1.40
4956 5227 2.574074 ACCCCCTCCGTTCCTAAATA 57.426 50.000 0.00 0.00 0.00 1.40
4957 5228 3.070525 ACCCCCTCCGTTCCTAAATAT 57.929 47.619 0.00 0.00 0.00 1.28
4958 5229 3.400419 ACCCCCTCCGTTCCTAAATATT 58.600 45.455 0.00 0.00 0.00 1.28
4959 5230 3.789840 ACCCCCTCCGTTCCTAAATATTT 59.210 43.478 5.89 5.89 0.00 1.40
4960 5231 4.977090 ACCCCCTCCGTTCCTAAATATTTA 59.023 41.667 7.66 7.66 0.00 1.40
4961 5232 5.613973 ACCCCCTCCGTTCCTAAATATTTAT 59.386 40.000 8.34 0.00 0.00 1.40
4962 5233 6.178324 CCCCCTCCGTTCCTAAATATTTATC 58.822 44.000 8.34 0.61 0.00 1.75
4963 5234 6.012771 CCCCCTCCGTTCCTAAATATTTATCT 60.013 42.308 8.34 0.00 0.00 1.98
4964 5235 7.459234 CCCCTCCGTTCCTAAATATTTATCTT 58.541 38.462 8.34 0.00 0.00 2.40
4965 5236 7.942894 CCCCTCCGTTCCTAAATATTTATCTTT 59.057 37.037 8.34 0.00 0.00 2.52
4966 5237 9.350951 CCCTCCGTTCCTAAATATTTATCTTTT 57.649 33.333 8.34 0.00 0.00 2.27
4987 5258 9.396022 TCTTTTTAGAGATTTCAACAAGTGACT 57.604 29.630 0.00 0.00 35.39 3.41
4990 5261 9.607988 TTTTAGAGATTTCAACAAGTGACTACA 57.392 29.630 0.00 0.00 35.39 2.74
4991 5262 9.778741 TTTAGAGATTTCAACAAGTGACTACAT 57.221 29.630 0.00 0.00 35.39 2.29
4993 5264 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
4994 5265 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
4995 5266 7.375834 AGATTTCAACAAGTGACTACATACGA 58.624 34.615 0.00 0.00 35.39 3.43
4996 5267 7.870954 AGATTTCAACAAGTGACTACATACGAA 59.129 33.333 0.00 0.00 35.39 3.85
4997 5268 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
4998 5269 6.509656 TTCAACAAGTGACTACATACGAAGT 58.490 36.000 0.00 0.00 39.84 3.01
4999 5270 7.650890 TTCAACAAGTGACTACATACGAAGTA 58.349 34.615 0.00 0.00 41.66 2.24
5000 5271 8.136800 TTCAACAAGTGACTACATACGAAGTAA 58.863 33.333 0.00 0.00 41.03 2.24
5048 5319 9.999009 AAATATGTCTATATACATCCGTACGTG 57.001 33.333 15.21 9.44 40.52 4.49
5049 5320 5.868043 TGTCTATATACATCCGTACGTGG 57.132 43.478 15.21 5.54 0.00 4.94
5050 5321 5.308014 TGTCTATATACATCCGTACGTGGT 58.692 41.667 15.21 11.27 0.00 4.16
5051 5322 6.463360 TGTCTATATACATCCGTACGTGGTA 58.537 40.000 15.21 13.05 0.00 3.25
5052 5323 6.591448 TGTCTATATACATCCGTACGTGGTAG 59.409 42.308 15.21 8.45 0.00 3.18
5053 5324 6.591834 GTCTATATACATCCGTACGTGGTAGT 59.408 42.308 15.21 7.78 0.00 2.73
5054 5325 5.869753 ATATACATCCGTACGTGGTAGTC 57.130 43.478 15.21 0.00 0.00 2.59
5055 5326 1.098050 ACATCCGTACGTGGTAGTCC 58.902 55.000 15.21 0.00 0.00 3.85
5056 5327 1.097232 CATCCGTACGTGGTAGTCCA 58.903 55.000 15.21 0.00 42.05 4.02
5057 5328 1.679680 CATCCGTACGTGGTAGTCCAT 59.320 52.381 15.21 0.00 46.20 3.41
5058 5329 1.838112 TCCGTACGTGGTAGTCCATT 58.162 50.000 15.21 0.00 46.20 3.16
5059 5330 2.170166 TCCGTACGTGGTAGTCCATTT 58.830 47.619 15.21 0.00 46.20 2.32
5060 5331 3.351740 TCCGTACGTGGTAGTCCATTTA 58.648 45.455 15.21 0.00 46.20 1.40
5061 5332 3.761218 TCCGTACGTGGTAGTCCATTTAA 59.239 43.478 15.21 0.00 46.20 1.52
5062 5333 4.219507 TCCGTACGTGGTAGTCCATTTAAA 59.780 41.667 15.21 0.00 46.20 1.52
5063 5334 4.928615 CCGTACGTGGTAGTCCATTTAAAA 59.071 41.667 15.21 0.00 46.20 1.52
5064 5335 5.581874 CCGTACGTGGTAGTCCATTTAAAAT 59.418 40.000 15.21 0.00 46.20 1.82
5065 5336 6.237915 CCGTACGTGGTAGTCCATTTAAAATC 60.238 42.308 15.21 0.00 46.20 2.17
5066 5337 6.532657 CGTACGTGGTAGTCCATTTAAAATCT 59.467 38.462 7.22 0.00 46.20 2.40
5067 5338 7.063780 CGTACGTGGTAGTCCATTTAAAATCTT 59.936 37.037 7.22 0.00 46.20 2.40
5068 5339 7.754851 ACGTGGTAGTCCATTTAAAATCTTT 57.245 32.000 0.00 0.00 46.20 2.52
5069 5340 8.851541 ACGTGGTAGTCCATTTAAAATCTTTA 57.148 30.769 0.00 0.00 46.20 1.85
5070 5341 9.287373 ACGTGGTAGTCCATTTAAAATCTTTAA 57.713 29.630 0.00 0.00 46.20 1.52
5102 5373 7.850935 AATATTTAGGAACGGATGGAGTAGA 57.149 36.000 0.00 0.00 0.00 2.59
5103 5374 8.437274 AATATTTAGGAACGGATGGAGTAGAT 57.563 34.615 0.00 0.00 0.00 1.98
5104 5375 6.749036 ATTTAGGAACGGATGGAGTAGATT 57.251 37.500 0.00 0.00 0.00 2.40
5105 5376 6.555463 TTTAGGAACGGATGGAGTAGATTT 57.445 37.500 0.00 0.00 0.00 2.17
5106 5377 6.555463 TTAGGAACGGATGGAGTAGATTTT 57.445 37.500 0.00 0.00 0.00 1.82
5107 5378 5.437191 AGGAACGGATGGAGTAGATTTTT 57.563 39.130 0.00 0.00 0.00 1.94
5108 5379 5.186198 AGGAACGGATGGAGTAGATTTTTG 58.814 41.667 0.00 0.00 0.00 2.44
5109 5380 4.335594 GGAACGGATGGAGTAGATTTTTGG 59.664 45.833 0.00 0.00 0.00 3.28
5110 5381 3.886123 ACGGATGGAGTAGATTTTTGGG 58.114 45.455 0.00 0.00 0.00 4.12
5111 5382 3.214328 CGGATGGAGTAGATTTTTGGGG 58.786 50.000 0.00 0.00 0.00 4.96
5112 5383 3.371595 CGGATGGAGTAGATTTTTGGGGT 60.372 47.826 0.00 0.00 0.00 4.95
5113 5384 3.954258 GGATGGAGTAGATTTTTGGGGTG 59.046 47.826 0.00 0.00 0.00 4.61
5114 5385 2.802719 TGGAGTAGATTTTTGGGGTGC 58.197 47.619 0.00 0.00 0.00 5.01
5115 5386 2.378547 TGGAGTAGATTTTTGGGGTGCT 59.621 45.455 0.00 0.00 0.00 4.40
5116 5387 3.589735 TGGAGTAGATTTTTGGGGTGCTA 59.410 43.478 0.00 0.00 0.00 3.49
5117 5388 4.200092 GGAGTAGATTTTTGGGGTGCTAG 58.800 47.826 0.00 0.00 0.00 3.42
5118 5389 4.324331 GGAGTAGATTTTTGGGGTGCTAGT 60.324 45.833 0.00 0.00 0.00 2.57
5119 5390 5.254115 GAGTAGATTTTTGGGGTGCTAGTT 58.746 41.667 0.00 0.00 0.00 2.24
5120 5391 5.254115 AGTAGATTTTTGGGGTGCTAGTTC 58.746 41.667 0.00 0.00 0.00 3.01
5121 5392 3.081804 AGATTTTTGGGGTGCTAGTTCG 58.918 45.455 0.00 0.00 0.00 3.95
5122 5393 1.611519 TTTTTGGGGTGCTAGTTCGG 58.388 50.000 0.00 0.00 0.00 4.30
5123 5394 0.766131 TTTTGGGGTGCTAGTTCGGA 59.234 50.000 0.00 0.00 0.00 4.55
5124 5395 0.035739 TTTGGGGTGCTAGTTCGGAC 59.964 55.000 0.00 0.00 0.00 4.79
5125 5396 1.122632 TTGGGGTGCTAGTTCGGACA 61.123 55.000 0.00 0.00 0.00 4.02
5126 5397 0.907704 TGGGGTGCTAGTTCGGACAT 60.908 55.000 0.00 0.00 0.00 3.06
5127 5398 0.462047 GGGGTGCTAGTTCGGACATG 60.462 60.000 0.00 0.00 0.00 3.21
5128 5399 0.462047 GGGTGCTAGTTCGGACATGG 60.462 60.000 0.00 0.00 0.00 3.66
5129 5400 0.462047 GGTGCTAGTTCGGACATGGG 60.462 60.000 0.00 0.00 0.00 4.00
5130 5401 0.535335 GTGCTAGTTCGGACATGGGA 59.465 55.000 0.00 0.00 0.00 4.37
5131 5402 0.535335 TGCTAGTTCGGACATGGGAC 59.465 55.000 0.00 0.00 0.00 4.46
5146 5417 3.805066 TGGGACATGATTCCTTGTCAA 57.195 42.857 14.94 4.36 44.58 3.18
5147 5418 4.111255 TGGGACATGATTCCTTGTCAAA 57.889 40.909 14.94 4.10 44.58 2.69
5148 5419 4.478203 TGGGACATGATTCCTTGTCAAAA 58.522 39.130 14.94 2.32 44.58 2.44
5149 5420 4.523943 TGGGACATGATTCCTTGTCAAAAG 59.476 41.667 14.94 0.00 44.58 2.27
5150 5421 4.766891 GGGACATGATTCCTTGTCAAAAGA 59.233 41.667 14.94 0.00 44.58 2.52
5151 5422 5.420104 GGGACATGATTCCTTGTCAAAAGAT 59.580 40.000 14.94 0.00 44.58 2.40
5152 5423 6.071165 GGGACATGATTCCTTGTCAAAAGATT 60.071 38.462 14.94 0.00 44.58 2.40
5153 5424 6.810182 GGACATGATTCCTTGTCAAAAGATTG 59.190 38.462 14.94 0.00 44.58 2.67
5154 5425 6.694447 ACATGATTCCTTGTCAAAAGATTGG 58.306 36.000 0.00 0.00 37.15 3.16
5155 5426 5.726980 TGATTCCTTGTCAAAAGATTGGG 57.273 39.130 0.00 0.00 37.15 4.12
5156 5427 5.147032 TGATTCCTTGTCAAAAGATTGGGT 58.853 37.500 0.00 0.00 37.15 4.51
5157 5428 4.935352 TTCCTTGTCAAAAGATTGGGTG 57.065 40.909 0.00 0.00 37.15 4.61
5158 5429 4.177537 TCCTTGTCAAAAGATTGGGTGA 57.822 40.909 0.00 0.00 37.15 4.02
5159 5430 4.541705 TCCTTGTCAAAAGATTGGGTGAA 58.458 39.130 0.00 0.00 37.15 3.18
5160 5431 4.340950 TCCTTGTCAAAAGATTGGGTGAAC 59.659 41.667 0.00 0.00 37.15 3.18
5161 5432 4.099266 CCTTGTCAAAAGATTGGGTGAACA 59.901 41.667 0.00 0.00 37.15 3.18
5162 5433 5.395103 CCTTGTCAAAAGATTGGGTGAACAA 60.395 40.000 0.00 0.00 37.15 2.83
5163 5434 5.004922 TGTCAAAAGATTGGGTGAACAAC 57.995 39.130 0.00 0.00 37.15 3.32
5164 5435 4.709397 TGTCAAAAGATTGGGTGAACAACT 59.291 37.500 0.00 0.00 37.15 3.16
5165 5436 5.888724 TGTCAAAAGATTGGGTGAACAACTA 59.111 36.000 0.00 0.00 37.15 2.24
5166 5437 6.549364 TGTCAAAAGATTGGGTGAACAACTAT 59.451 34.615 0.00 0.00 37.15 2.12
5167 5438 7.084486 GTCAAAAGATTGGGTGAACAACTATC 58.916 38.462 0.00 0.00 37.15 2.08
5168 5439 7.004086 TCAAAAGATTGGGTGAACAACTATCT 58.996 34.615 0.00 0.00 37.15 1.98
5169 5440 7.505585 TCAAAAGATTGGGTGAACAACTATCTT 59.494 33.333 11.68 11.68 37.15 2.40
5170 5441 7.839680 AAAGATTGGGTGAACAACTATCTTT 57.160 32.000 18.08 18.08 37.01 2.52
5171 5442 7.839680 AAGATTGGGTGAACAACTATCTTTT 57.160 32.000 11.68 0.00 32.49 2.27
5172 5443 7.839680 AGATTGGGTGAACAACTATCTTTTT 57.160 32.000 0.00 0.00 32.39 1.94
5188 5459 2.806608 TTTTTACCTGCTCGTCGTCT 57.193 45.000 0.00 0.00 0.00 4.18
5189 5460 2.342910 TTTTACCTGCTCGTCGTCTC 57.657 50.000 0.00 0.00 0.00 3.36
5190 5461 1.241165 TTTACCTGCTCGTCGTCTCA 58.759 50.000 0.00 0.00 0.00 3.27
5191 5462 0.803117 TTACCTGCTCGTCGTCTCAG 59.197 55.000 0.00 0.00 0.00 3.35
5192 5463 0.036671 TACCTGCTCGTCGTCTCAGA 60.037 55.000 10.89 0.00 0.00 3.27
5193 5464 0.678366 ACCTGCTCGTCGTCTCAGAT 60.678 55.000 10.89 0.00 0.00 2.90
5194 5465 0.028770 CCTGCTCGTCGTCTCAGATC 59.971 60.000 10.89 0.00 0.00 2.75
5195 5466 1.013596 CTGCTCGTCGTCTCAGATCT 58.986 55.000 0.00 0.00 0.00 2.75
5196 5467 0.729690 TGCTCGTCGTCTCAGATCTG 59.270 55.000 17.07 17.07 0.00 2.90
5197 5468 0.591236 GCTCGTCGTCTCAGATCTGC 60.591 60.000 18.36 3.28 0.00 4.26
5198 5469 0.315788 CTCGTCGTCTCAGATCTGCG 60.316 60.000 18.36 15.41 0.00 5.18
5199 5470 1.936880 CGTCGTCTCAGATCTGCGC 60.937 63.158 18.36 0.00 0.00 6.09
5200 5471 1.936880 GTCGTCTCAGATCTGCGCG 60.937 63.158 18.36 19.28 0.00 6.86
5201 5472 2.653448 CGTCTCAGATCTGCGCGG 60.653 66.667 18.36 10.86 0.00 6.46
5202 5473 2.279120 GTCTCAGATCTGCGCGGG 60.279 66.667 18.36 4.96 0.00 6.13
5203 5474 2.440247 TCTCAGATCTGCGCGGGA 60.440 61.111 18.36 11.07 0.00 5.14
5204 5475 2.027314 CTCAGATCTGCGCGGGAG 59.973 66.667 18.36 11.07 0.00 4.30
5205 5476 3.496875 CTCAGATCTGCGCGGGAGG 62.497 68.421 18.36 4.07 0.00 4.30
5206 5477 3.531207 CAGATCTGCGCGGGAGGA 61.531 66.667 17.88 0.00 0.00 3.71
5207 5478 3.532155 AGATCTGCGCGGGAGGAC 61.532 66.667 17.88 6.56 0.00 3.85
5208 5479 4.933064 GATCTGCGCGGGAGGACG 62.933 72.222 17.88 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.943036 TCTTCCGCCAAGTACCTTTT 57.057 45.000 0.00 0.00 33.27 2.27
38 39 6.545504 ACATATTCGATAACAAGTGGCATC 57.454 37.500 0.00 0.00 0.00 3.91
65 66 1.668826 TAGGAATCCTTGGTGTGGCT 58.331 50.000 7.30 0.00 34.61 4.75
147 149 0.801872 CGTTGTGCCATCCGATTCAA 59.198 50.000 0.00 0.00 0.00 2.69
186 188 0.889186 GAATGTCCCACCGTTGTGCT 60.889 55.000 0.00 0.00 41.35 4.40
193 195 2.930950 ACCAATATGAATGTCCCACCG 58.069 47.619 0.00 0.00 0.00 4.94
195 197 3.489059 CGCAACCAATATGAATGTCCCAC 60.489 47.826 0.00 0.00 0.00 4.61
203 205 7.561021 AATACATGTACGCAACCAATATGAA 57.439 32.000 7.96 0.00 0.00 2.57
213 215 7.142021 ACAATTGAACAAATACATGTACGCAA 58.858 30.769 13.59 6.96 32.02 4.85
268 286 5.120830 GCTCATTGTGTTGTAGTACAAGAGG 59.879 44.000 16.03 5.57 39.00 3.69
287 305 0.179100 CACGATGACCGGAAGCTCAT 60.179 55.000 9.46 6.74 43.93 2.90
288 306 1.215382 CACGATGACCGGAAGCTCA 59.785 57.895 9.46 0.27 43.93 4.26
307 326 8.898761 TCTTTGAAGATAGATAGTGTCTGACTC 58.101 37.037 9.51 5.53 37.83 3.36
334 364 0.596577 TGGTGACCGAAAGAGACTCG 59.403 55.000 0.00 0.00 36.06 4.18
386 418 2.743636 TAAACTCGCAACCCTCTCTG 57.256 50.000 0.00 0.00 0.00 3.35
483 519 1.618837 GCCCTCTGTGTAGTCAGACAA 59.381 52.381 2.66 0.00 39.20 3.18
559 595 4.339872 TTTGCCGGAGTAACAAGAGTTA 57.660 40.909 5.05 0.00 39.15 2.24
616 652 1.271926 ACTTGCTAACACACCCCCATC 60.272 52.381 0.00 0.00 0.00 3.51
617 653 0.777446 ACTTGCTAACACACCCCCAT 59.223 50.000 0.00 0.00 0.00 4.00
620 656 2.293399 CTGAAACTTGCTAACACACCCC 59.707 50.000 0.00 0.00 0.00 4.95
621 657 2.949644 ACTGAAACTTGCTAACACACCC 59.050 45.455 0.00 0.00 0.00 4.61
623 659 3.181501 TGCACTGAAACTTGCTAACACAC 60.182 43.478 0.00 0.00 39.62 3.82
624 660 3.013219 TGCACTGAAACTTGCTAACACA 58.987 40.909 0.00 0.00 39.62 3.72
626 662 4.916983 AATGCACTGAAACTTGCTAACA 57.083 36.364 0.00 0.00 39.62 2.41
627 663 6.002062 AGTAATGCACTGAAACTTGCTAAC 57.998 37.500 0.00 0.00 39.62 2.34
630 666 3.503748 GGAGTAATGCACTGAAACTTGCT 59.496 43.478 0.00 0.00 37.72 3.91
631 667 3.503748 AGGAGTAATGCACTGAAACTTGC 59.496 43.478 0.00 0.00 37.72 4.01
632 668 4.999950 AGAGGAGTAATGCACTGAAACTTG 59.000 41.667 0.00 0.00 37.72 3.16
633 669 5.234466 AGAGGAGTAATGCACTGAAACTT 57.766 39.130 0.00 0.00 37.72 2.66
634 670 4.899352 AGAGGAGTAATGCACTGAAACT 57.101 40.909 0.00 0.00 37.72 2.66
635 671 4.757149 ACAAGAGGAGTAATGCACTGAAAC 59.243 41.667 0.00 0.00 37.72 2.78
636 672 4.973168 ACAAGAGGAGTAATGCACTGAAA 58.027 39.130 0.00 0.00 37.72 2.69
637 673 4.623932 ACAAGAGGAGTAATGCACTGAA 57.376 40.909 0.00 0.00 37.72 3.02
638 674 5.939764 ATACAAGAGGAGTAATGCACTGA 57.060 39.130 0.00 0.00 37.72 3.41
671 707 9.536510 AGGACCTAGCTAAAGGAGTAATAATAG 57.463 37.037 9.63 0.00 39.15 1.73
672 708 9.893975 AAGGACCTAGCTAAAGGAGTAATAATA 57.106 33.333 9.63 0.00 39.15 0.98
674 710 7.070821 CCAAGGACCTAGCTAAAGGAGTAATAA 59.929 40.741 9.63 0.00 39.15 1.40
680 716 2.436173 CCCAAGGACCTAGCTAAAGGAG 59.564 54.545 9.63 0.00 39.15 3.69
681 717 2.045326 TCCCAAGGACCTAGCTAAAGGA 59.955 50.000 9.63 0.00 39.15 3.36
682 718 2.478292 TCCCAAGGACCTAGCTAAAGG 58.522 52.381 0.62 0.62 42.82 3.11
683 719 3.682999 GCTTCCCAAGGACCTAGCTAAAG 60.683 52.174 6.03 3.38 32.24 1.85
684 720 2.238898 GCTTCCCAAGGACCTAGCTAAA 59.761 50.000 6.03 0.00 32.24 1.85
685 721 1.838077 GCTTCCCAAGGACCTAGCTAA 59.162 52.381 6.03 0.00 32.24 3.09
686 722 1.497161 GCTTCCCAAGGACCTAGCTA 58.503 55.000 6.03 0.00 32.24 3.32
687 723 1.275421 GGCTTCCCAAGGACCTAGCT 61.275 60.000 12.00 0.00 34.55 3.32
688 724 1.224870 GGCTTCCCAAGGACCTAGC 59.775 63.158 4.82 4.82 33.67 3.42
689 725 1.290134 AAGGCTTCCCAAGGACCTAG 58.710 55.000 0.00 0.00 29.49 3.02
690 726 1.633945 GAAAGGCTTCCCAAGGACCTA 59.366 52.381 0.00 0.00 29.49 3.08
691 727 0.405973 GAAAGGCTTCCCAAGGACCT 59.594 55.000 0.00 0.00 30.64 3.85
692 728 0.405973 AGAAAGGCTTCCCAAGGACC 59.594 55.000 0.00 0.00 31.28 4.46
693 729 1.827681 GAGAAAGGCTTCCCAAGGAC 58.172 55.000 0.00 0.00 31.28 3.85
694 730 0.324943 CGAGAAAGGCTTCCCAAGGA 59.675 55.000 0.00 0.00 31.28 3.36
695 731 0.324943 TCGAGAAAGGCTTCCCAAGG 59.675 55.000 0.00 0.00 31.28 3.61
696 732 1.002544 ACTCGAGAAAGGCTTCCCAAG 59.997 52.381 21.68 0.00 31.28 3.61
697 733 1.002087 GACTCGAGAAAGGCTTCCCAA 59.998 52.381 21.68 0.00 31.28 4.12
698 734 0.608640 GACTCGAGAAAGGCTTCCCA 59.391 55.000 21.68 0.00 31.28 4.37
699 735 0.458716 CGACTCGAGAAAGGCTTCCC 60.459 60.000 21.68 0.00 31.28 3.97
700 736 0.526662 TCGACTCGAGAAAGGCTTCC 59.473 55.000 21.68 0.00 31.28 3.46
837 874 1.174712 CCCATCTTGGCCCATTAGCG 61.175 60.000 0.00 0.00 35.79 4.26
909 946 4.454948 TTGGTCTCGTGCCAAGTG 57.545 55.556 8.61 0.00 40.69 3.16
938 975 2.584391 GCCCAGTTCCTCCACGACT 61.584 63.158 0.00 0.00 0.00 4.18
976 1013 2.423446 CATAGAGTCCGGGGCAGC 59.577 66.667 0.00 0.00 0.00 5.25
989 1026 1.069765 CAGGGTGGCCGTAGCATAG 59.930 63.158 0.00 0.00 42.56 2.23
990 1027 3.101796 GCAGGGTGGCCGTAGCATA 62.102 63.158 0.00 0.00 42.56 3.14
991 1028 4.489771 GCAGGGTGGCCGTAGCAT 62.490 66.667 0.00 0.00 42.56 3.79
1020 1057 3.181502 CCTAGACGACCGACTAAAAGGAC 60.182 52.174 0.00 0.00 0.00 3.85
1085 1122 6.605119 TCTTTCTTTTTCTGGACTGGATTCT 58.395 36.000 0.00 0.00 0.00 2.40
1103 1140 1.268283 CGGCCCTCTCCCTTCTTTCT 61.268 60.000 0.00 0.00 0.00 2.52
1147 1184 1.087501 CACTCGACGACTCCATCTCA 58.912 55.000 0.00 0.00 0.00 3.27
1185 1228 1.815421 CCCGCCACAGATCTTTCCG 60.815 63.158 0.00 0.00 0.00 4.30
1329 1372 0.530744 TGTCTTCTTCCCCATCGTCG 59.469 55.000 0.00 0.00 0.00 5.12
1595 1644 6.573094 GCATTTAGATCAGTTTTGGCTTCCTT 60.573 38.462 0.00 0.00 0.00 3.36
1693 1745 4.095483 GCTGCTGCTTCACACTTAACATAT 59.905 41.667 8.53 0.00 36.03 1.78
1751 1803 2.095415 TCGTCGTCATCGTGTCATTCTT 60.095 45.455 0.00 0.00 38.33 2.52
1778 1830 0.396695 CCCCTAGAGGTGTCCGCTAA 60.397 60.000 0.00 0.00 35.62 3.09
1807 1859 3.005539 GCCACCTCCTCAGCCAGA 61.006 66.667 0.00 0.00 0.00 3.86
1869 1921 6.205464 CAGTAGCTCCAAAAATTCTTCAGTCA 59.795 38.462 0.00 0.00 0.00 3.41
1887 1939 1.011595 TTCCTCCTCCTCCAGTAGCT 58.988 55.000 0.00 0.00 0.00 3.32
1965 2017 3.144506 GACCAATCATCATCCGCTTGAT 58.855 45.455 0.00 0.00 36.79 2.57
2007 2059 2.657102 CTTCAGGAGCTCCATCGCCC 62.657 65.000 33.90 6.37 38.89 6.13
2052 2104 1.761449 TGCTTCAAACTTGGCAGACA 58.239 45.000 0.00 0.00 0.00 3.41
2185 2240 4.382541 TCCTCAGCCGCCTCCTCA 62.383 66.667 0.00 0.00 0.00 3.86
2266 2324 1.944024 ACCATCTCTCTCGTTCTAGCG 59.056 52.381 0.00 0.00 0.00 4.26
2412 2470 1.483307 GCTAGGATAGGGCTGGAGGAA 60.483 57.143 0.00 0.00 39.70 3.36
2470 2539 6.531594 GCAAATAGCGCAGTCAGTGATATATA 59.468 38.462 11.47 0.00 38.30 0.86
2471 2540 5.349817 GCAAATAGCGCAGTCAGTGATATAT 59.650 40.000 11.47 0.00 38.30 0.86
2592 2667 6.830838 CACATTAGGGGCTTCTTTATCTTTCT 59.169 38.462 0.00 0.00 0.00 2.52
2748 2827 1.870402 CAATGAAGCCGTGTGTGTACA 59.130 47.619 0.00 0.00 0.00 2.90
3077 3173 4.389374 CTCTAGGCAAACCAGACTTGAAA 58.611 43.478 0.00 0.00 39.06 2.69
3079 3175 2.303022 CCTCTAGGCAAACCAGACTTGA 59.697 50.000 0.00 0.00 39.06 3.02
3093 3189 9.747898 ATAACAGATATGTCTAGAACCTCTAGG 57.252 37.037 10.13 0.00 44.99 3.02
3127 3225 5.537300 ATGTCGAGTAGCATAATGGAAGT 57.463 39.130 0.00 0.00 0.00 3.01
3131 3229 5.760253 AGGAAAATGTCGAGTAGCATAATGG 59.240 40.000 0.00 0.00 0.00 3.16
3145 3243 4.853924 TGCCAAAGAAGAGGAAAATGTC 57.146 40.909 0.00 0.00 0.00 3.06
3148 3246 7.015584 ACAAGTTATGCCAAAGAAGAGGAAAAT 59.984 33.333 0.00 0.00 0.00 1.82
3152 3250 4.985538 ACAAGTTATGCCAAAGAAGAGGA 58.014 39.130 0.00 0.00 0.00 3.71
3197 3295 8.579006 TCTTCAAATCATCACAGCAATTTAAGT 58.421 29.630 0.00 0.00 0.00 2.24
3222 3344 2.409948 ATGTAAGGTGAGCAAGCCTC 57.590 50.000 0.00 0.00 41.15 4.70
3267 3389 9.683069 AGAACTAACTTATGTTGAGCAAAATTG 57.317 29.630 4.33 0.00 37.59 2.32
3374 3496 6.144402 CACACCATTTTGACAAAGATAAGTGC 59.856 38.462 0.10 0.00 0.00 4.40
3405 3527 4.242475 GACCATCAACAGTCGAATGTACA 58.758 43.478 19.98 9.07 31.70 2.90
3484 3606 4.742417 CATAAGAGACCGATCCTGCATAG 58.258 47.826 0.00 0.00 0.00 2.23
3827 3949 4.701651 TCAAGTGGCAATCTATCACCTTTG 59.298 41.667 0.00 0.00 32.29 2.77
3846 3968 5.023533 TCGATCCTTCCTTTACCATCAAG 57.976 43.478 0.00 0.00 0.00 3.02
3866 3988 0.433492 CTACACGGCGTGAAAACTCG 59.567 55.000 42.65 17.26 36.96 4.18
4025 4156 3.901222 TCACAGTTACCTCCATCTCACAA 59.099 43.478 0.00 0.00 0.00 3.33
4089 4220 5.564848 GCCAACCTTAAGCTCTTTACAAAGG 60.565 44.000 0.00 7.15 36.67 3.11
4141 4272 0.310854 AACAGCAAAGCCAGTTACGC 59.689 50.000 0.00 0.00 0.00 4.42
4142 4273 3.188460 ACATAACAGCAAAGCCAGTTACG 59.812 43.478 6.74 2.91 34.28 3.18
4193 4324 2.980568 TCAGACAACTTGACAACCGTT 58.019 42.857 0.00 0.00 0.00 4.44
4232 4363 9.783081 TCATAATAGTGTCATAAGTAGTACGGA 57.217 33.333 0.00 0.00 0.00 4.69
4302 4433 7.936847 ACCTATGGCAATGAGATTATTAACGAA 59.063 33.333 0.00 0.00 0.00 3.85
4323 4579 9.646522 ATCAAAATAACATTCTAAGGCACCTAT 57.353 29.630 0.00 0.00 0.00 2.57
4363 4619 3.559069 TCAATGAAAGGGATGAGGATGC 58.441 45.455 0.00 0.00 0.00 3.91
4371 4627 8.156165 TGTAAATTTTGCTTCAATGAAAGGGAT 58.844 29.630 0.00 0.00 0.00 3.85
4383 4654 3.843999 TGCCGGATGTAAATTTTGCTTC 58.156 40.909 5.05 5.04 0.00 3.86
4407 4678 3.372554 GAGAAACGAGGGGGCCGAG 62.373 68.421 0.00 0.00 0.00 4.63
4415 4686 1.006102 ACACGCCAGAGAAACGAGG 60.006 57.895 0.00 0.00 0.00 4.63
4418 4689 2.317609 CCCACACGCCAGAGAAACG 61.318 63.158 0.00 0.00 0.00 3.60
4446 4717 2.123683 TGAGGCCGCCCAAACAAA 60.124 55.556 5.55 0.00 0.00 2.83
4456 4727 2.433838 CAGCTCACAGTGAGGCCG 60.434 66.667 28.35 11.96 44.43 6.13
4461 4732 1.704641 ACACTACCAGCTCACAGTGA 58.295 50.000 19.74 2.48 40.67 3.41
4484 4755 5.221742 CCCCTAACTGAGAAGGCCTAATAAG 60.222 48.000 5.16 2.28 0.00 1.73
4502 4773 3.835978 TCGAGAATCAGTTTGACCCCTAA 59.164 43.478 0.00 0.00 33.17 2.69
4503 4774 3.437213 TCGAGAATCAGTTTGACCCCTA 58.563 45.455 0.00 0.00 33.17 3.53
4504 4775 2.257207 TCGAGAATCAGTTTGACCCCT 58.743 47.619 0.00 0.00 33.17 4.79
4505 4776 2.762535 TCGAGAATCAGTTTGACCCC 57.237 50.000 0.00 0.00 33.17 4.95
4506 4777 5.432885 TTTTTCGAGAATCAGTTTGACCC 57.567 39.130 0.00 0.00 33.17 4.46
4529 4800 5.903010 ACCAAAGTTTGACCCCTATCTTTTT 59.097 36.000 17.33 0.00 0.00 1.94
4530 4801 5.464069 ACCAAAGTTTGACCCCTATCTTTT 58.536 37.500 17.33 0.00 0.00 2.27
4531 4802 5.074746 ACCAAAGTTTGACCCCTATCTTT 57.925 39.130 17.33 0.00 0.00 2.52
4532 4803 4.105697 TGACCAAAGTTTGACCCCTATCTT 59.894 41.667 17.33 0.00 0.00 2.40
4533 4804 3.655777 TGACCAAAGTTTGACCCCTATCT 59.344 43.478 17.33 0.00 0.00 1.98
4534 4805 4.028993 TGACCAAAGTTTGACCCCTATC 57.971 45.455 17.33 3.84 0.00 2.08
4587 4858 4.633565 GGACGGAGGGAGTATATAAGTACG 59.366 50.000 0.00 0.00 0.00 3.67
4591 4862 3.015327 CCGGACGGAGGGAGTATATAAG 58.985 54.545 4.40 0.00 37.50 1.73
4592 4863 2.644299 TCCGGACGGAGGGAGTATATAA 59.356 50.000 9.76 0.00 39.76 0.98
4626 4897 4.824479 ACAGCCCCTTTTATCCATTTTG 57.176 40.909 0.00 0.00 0.00 2.44
4633 4904 5.010820 ACGTCTAGATACAGCCCCTTTTATC 59.989 44.000 0.00 0.00 0.00 1.75
4638 4909 2.456073 ACGTCTAGATACAGCCCCTT 57.544 50.000 0.00 0.00 0.00 3.95
4677 4948 9.300681 ACTTGTCATCAAAATGGATAGAAAGAA 57.699 29.630 0.00 0.00 33.42 2.52
4704 4975 8.980832 ATATACTACTCCCTCCATCAGAAAAT 57.019 34.615 0.00 0.00 0.00 1.82
4710 4981 8.045507 CGTACTTATATACTACTCCCTCCATCA 58.954 40.741 0.00 0.00 0.00 3.07
4716 4987 9.898152 GGAATACGTACTTATATACTACTCCCT 57.102 37.037 0.00 0.00 0.00 4.20
4720 4991 9.898152 GGAGGGAATACGTACTTATATACTACT 57.102 37.037 0.00 0.00 0.00 2.57
4721 4992 8.821894 CGGAGGGAATACGTACTTATATACTAC 58.178 40.741 0.00 0.00 0.00 2.73
4722 4993 8.948631 CGGAGGGAATACGTACTTATATACTA 57.051 38.462 0.00 0.00 0.00 1.82
4723 4994 7.856145 CGGAGGGAATACGTACTTATATACT 57.144 40.000 0.00 0.00 0.00 2.12
4735 5006 1.108776 TTCTGGACGGAGGGAATACG 58.891 55.000 0.00 0.00 42.79 3.06
4736 5007 3.840124 ATTTCTGGACGGAGGGAATAC 57.160 47.619 0.00 0.00 0.00 1.89
4737 5008 4.553678 AGTATTTCTGGACGGAGGGAATA 58.446 43.478 0.00 0.00 0.00 1.75
4739 5010 2.829023 AGTATTTCTGGACGGAGGGAA 58.171 47.619 0.00 0.00 0.00 3.97
4740 5011 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
4742 5013 3.611766 ACAAGTATTTCTGGACGGAGG 57.388 47.619 0.00 0.00 0.00 4.30
4743 5014 3.684788 CCAACAAGTATTTCTGGACGGAG 59.315 47.826 0.00 0.00 0.00 4.63
4745 5016 3.670625 TCCAACAAGTATTTCTGGACGG 58.329 45.455 0.00 0.00 31.19 4.79
4747 5018 6.877611 TTTCTCCAACAAGTATTTCTGGAC 57.122 37.500 0.00 0.00 32.75 4.02
4748 5019 6.071952 GCATTTCTCCAACAAGTATTTCTGGA 60.072 38.462 0.00 0.00 34.97 3.86
4749 5020 6.095377 GCATTTCTCCAACAAGTATTTCTGG 58.905 40.000 0.00 0.00 0.00 3.86
4750 5021 6.680810 TGCATTTCTCCAACAAGTATTTCTG 58.319 36.000 0.00 0.00 0.00 3.02
4751 5022 6.899393 TGCATTTCTCCAACAAGTATTTCT 57.101 33.333 0.00 0.00 0.00 2.52
4754 5025 9.995003 TTTTTATGCATTTCTCCAACAAGTATT 57.005 25.926 3.54 0.00 0.00 1.89
4757 5028 9.995003 TTATTTTTATGCATTTCTCCAACAAGT 57.005 25.926 3.54 0.00 0.00 3.16
4802 5073 9.379770 TCAGAGGAATGGATGTATCTAAATGTA 57.620 33.333 0.00 0.00 0.00 2.29
4803 5074 8.153550 GTCAGAGGAATGGATGTATCTAAATGT 58.846 37.037 0.00 0.00 0.00 2.71
4804 5075 7.330454 CGTCAGAGGAATGGATGTATCTAAATG 59.670 40.741 0.00 0.00 0.00 2.32
4805 5076 7.233553 TCGTCAGAGGAATGGATGTATCTAAAT 59.766 37.037 0.00 0.00 0.00 1.40
4806 5077 6.549736 TCGTCAGAGGAATGGATGTATCTAAA 59.450 38.462 0.00 0.00 0.00 1.85
4807 5078 6.068670 TCGTCAGAGGAATGGATGTATCTAA 58.931 40.000 0.00 0.00 0.00 2.10
4808 5079 5.631119 TCGTCAGAGGAATGGATGTATCTA 58.369 41.667 0.00 0.00 0.00 1.98
4809 5080 4.474394 TCGTCAGAGGAATGGATGTATCT 58.526 43.478 0.00 0.00 0.00 1.98
4810 5081 4.804108 CTCGTCAGAGGAATGGATGTATC 58.196 47.826 0.00 0.00 40.75 2.24
4811 5082 4.862902 CTCGTCAGAGGAATGGATGTAT 57.137 45.455 0.00 0.00 40.75 2.29
4824 5095 2.159476 CCGTCCGAAAATACTCGTCAGA 60.159 50.000 0.00 0.00 37.11 3.27
4825 5096 2.159476 TCCGTCCGAAAATACTCGTCAG 60.159 50.000 0.00 0.00 37.11 3.51
4826 5097 1.811965 TCCGTCCGAAAATACTCGTCA 59.188 47.619 0.00 0.00 37.11 4.35
4827 5098 2.448219 CTCCGTCCGAAAATACTCGTC 58.552 52.381 0.00 0.00 37.11 4.20
4828 5099 1.133790 CCTCCGTCCGAAAATACTCGT 59.866 52.381 0.00 0.00 37.11 4.18
4829 5100 1.535437 CCCTCCGTCCGAAAATACTCG 60.535 57.143 0.00 0.00 38.58 4.18
4830 5101 1.753073 TCCCTCCGTCCGAAAATACTC 59.247 52.381 0.00 0.00 0.00 2.59
4831 5102 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
4832 5103 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
4833 5104 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
4834 5105 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
4835 5106 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
4836 5107 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
4837 5108 0.033796 ATGTACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
4838 5109 0.839277 TATGTACTCCCTCCGTCCGA 59.161 55.000 0.00 0.00 0.00 4.55
4839 5110 1.906990 ATATGTACTCCCTCCGTCCG 58.093 55.000 0.00 0.00 0.00 4.79
4840 5111 3.190118 CGTTATATGTACTCCCTCCGTCC 59.810 52.174 0.00 0.00 0.00 4.79
4841 5112 3.190118 CCGTTATATGTACTCCCTCCGTC 59.810 52.174 0.00 0.00 0.00 4.79
4842 5113 3.152341 CCGTTATATGTACTCCCTCCGT 58.848 50.000 0.00 0.00 0.00 4.69
4843 5114 3.415212 TCCGTTATATGTACTCCCTCCG 58.585 50.000 0.00 0.00 0.00 4.63
4844 5115 5.796424 TTTCCGTTATATGTACTCCCTCC 57.204 43.478 0.00 0.00 0.00 4.30
4916 5187 6.777580 GGGGTATGTTGTTAATTGATCCATCT 59.222 38.462 0.00 0.00 0.00 2.90
4926 5197 2.848071 ACGGAGGGGGTATGTTGTTAAT 59.152 45.455 0.00 0.00 0.00 1.40
4928 5199 1.955451 ACGGAGGGGGTATGTTGTTA 58.045 50.000 0.00 0.00 0.00 2.41
4929 5200 1.003928 GAACGGAGGGGGTATGTTGTT 59.996 52.381 0.00 0.00 0.00 2.83
4938 5209 4.448720 AAATATTTAGGAACGGAGGGGG 57.551 45.455 0.00 0.00 0.00 5.40
4939 5210 7.017319 AGATAAATATTTAGGAACGGAGGGG 57.983 40.000 13.15 0.00 0.00 4.79
4940 5211 8.919777 AAAGATAAATATTTAGGAACGGAGGG 57.080 34.615 13.15 0.00 0.00 4.30
4961 5232 9.396022 AGTCACTTGTTGAAATCTCTAAAAAGA 57.604 29.630 0.00 0.00 35.39 2.52
4964 5235 9.607988 TGTAGTCACTTGTTGAAATCTCTAAAA 57.392 29.630 0.00 0.00 35.39 1.52
4965 5236 9.778741 ATGTAGTCACTTGTTGAAATCTCTAAA 57.221 29.630 0.00 0.00 35.39 1.85
4967 5238 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
4968 5239 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
4969 5240 7.541091 TCGTATGTAGTCACTTGTTGAAATCTC 59.459 37.037 0.00 0.00 35.39 2.75
4970 5241 7.375834 TCGTATGTAGTCACTTGTTGAAATCT 58.624 34.615 0.00 0.00 35.39 2.40
4971 5242 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
4972 5243 7.656137 ACTTCGTATGTAGTCACTTGTTGAAAT 59.344 33.333 0.00 0.00 35.39 2.17
4973 5244 6.982141 ACTTCGTATGTAGTCACTTGTTGAAA 59.018 34.615 0.00 0.00 35.39 2.69
4974 5245 6.509656 ACTTCGTATGTAGTCACTTGTTGAA 58.490 36.000 0.00 0.00 35.39 2.69
4975 5246 6.080648 ACTTCGTATGTAGTCACTTGTTGA 57.919 37.500 0.00 0.00 0.00 3.18
4976 5247 7.862741 TTACTTCGTATGTAGTCACTTGTTG 57.137 36.000 0.00 0.00 0.00 3.33
4977 5248 8.876275 TTTTACTTCGTATGTAGTCACTTGTT 57.124 30.769 0.00 0.00 0.00 2.83
4978 5249 9.485206 AATTTTACTTCGTATGTAGTCACTTGT 57.515 29.630 0.00 0.00 0.00 3.16
5022 5293 9.999009 CACGTACGGATGTATATAGACATATTT 57.001 33.333 21.06 3.30 40.18 1.40
5023 5294 8.618677 CCACGTACGGATGTATATAGACATATT 58.381 37.037 21.06 3.62 40.18 1.28
5024 5295 7.772292 ACCACGTACGGATGTATATAGACATAT 59.228 37.037 21.06 5.08 40.18 1.78
5025 5296 7.105588 ACCACGTACGGATGTATATAGACATA 58.894 38.462 21.06 0.00 40.18 2.29
5026 5297 5.942236 ACCACGTACGGATGTATATAGACAT 59.058 40.000 21.06 12.70 42.82 3.06
5027 5298 5.308014 ACCACGTACGGATGTATATAGACA 58.692 41.667 21.06 2.07 32.11 3.41
5028 5299 5.869753 ACCACGTACGGATGTATATAGAC 57.130 43.478 21.06 0.00 32.11 2.59
5029 5300 6.701340 ACTACCACGTACGGATGTATATAGA 58.299 40.000 21.06 0.00 32.11 1.98
5030 5301 6.036517 GGACTACCACGTACGGATGTATATAG 59.963 46.154 21.06 11.06 35.97 1.31
5031 5302 5.874810 GGACTACCACGTACGGATGTATATA 59.125 44.000 21.06 0.00 35.97 0.86
5032 5303 4.697352 GGACTACCACGTACGGATGTATAT 59.303 45.833 21.06 8.53 35.97 0.86
5033 5304 4.065088 GGACTACCACGTACGGATGTATA 58.935 47.826 21.06 3.97 35.97 1.47
5034 5305 2.880890 GGACTACCACGTACGGATGTAT 59.119 50.000 21.06 0.21 35.97 2.29
5035 5306 2.288666 GGACTACCACGTACGGATGTA 58.711 52.381 21.06 15.33 35.97 2.29
5036 5307 1.098050 GGACTACCACGTACGGATGT 58.902 55.000 21.06 15.02 35.97 3.06
5037 5308 1.097232 TGGACTACCACGTACGGATG 58.903 55.000 21.06 9.60 41.77 3.51
5038 5309 3.575506 TGGACTACCACGTACGGAT 57.424 52.632 21.06 6.82 41.77 4.18
5076 5347 9.370930 TCTACTCCATCCGTTCCTAAATATTTA 57.629 33.333 7.66 7.66 0.00 1.40
5077 5348 8.258850 TCTACTCCATCCGTTCCTAAATATTT 57.741 34.615 5.89 5.89 0.00 1.40
5078 5349 7.850935 TCTACTCCATCCGTTCCTAAATATT 57.149 36.000 0.00 0.00 0.00 1.28
5079 5350 8.437274 AATCTACTCCATCCGTTCCTAAATAT 57.563 34.615 0.00 0.00 0.00 1.28
5080 5351 7.850935 AATCTACTCCATCCGTTCCTAAATA 57.149 36.000 0.00 0.00 0.00 1.40
5081 5352 6.749036 AATCTACTCCATCCGTTCCTAAAT 57.251 37.500 0.00 0.00 0.00 1.40
5082 5353 6.555463 AAATCTACTCCATCCGTTCCTAAA 57.445 37.500 0.00 0.00 0.00 1.85
5083 5354 6.555463 AAAATCTACTCCATCCGTTCCTAA 57.445 37.500 0.00 0.00 0.00 2.69
5084 5355 6.346096 CAAAAATCTACTCCATCCGTTCCTA 58.654 40.000 0.00 0.00 0.00 2.94
5085 5356 5.186198 CAAAAATCTACTCCATCCGTTCCT 58.814 41.667 0.00 0.00 0.00 3.36
5086 5357 4.335594 CCAAAAATCTACTCCATCCGTTCC 59.664 45.833 0.00 0.00 0.00 3.62
5087 5358 4.335594 CCCAAAAATCTACTCCATCCGTTC 59.664 45.833 0.00 0.00 0.00 3.95
5088 5359 4.270008 CCCAAAAATCTACTCCATCCGTT 58.730 43.478 0.00 0.00 0.00 4.44
5089 5360 3.371595 CCCCAAAAATCTACTCCATCCGT 60.372 47.826 0.00 0.00 0.00 4.69
5090 5361 3.214328 CCCCAAAAATCTACTCCATCCG 58.786 50.000 0.00 0.00 0.00 4.18
5091 5362 3.954258 CACCCCAAAAATCTACTCCATCC 59.046 47.826 0.00 0.00 0.00 3.51
5092 5363 3.381590 GCACCCCAAAAATCTACTCCATC 59.618 47.826 0.00 0.00 0.00 3.51
5093 5364 3.011708 AGCACCCCAAAAATCTACTCCAT 59.988 43.478 0.00 0.00 0.00 3.41
5094 5365 2.378547 AGCACCCCAAAAATCTACTCCA 59.621 45.455 0.00 0.00 0.00 3.86
5095 5366 3.087370 AGCACCCCAAAAATCTACTCC 57.913 47.619 0.00 0.00 0.00 3.85
5096 5367 4.844884 ACTAGCACCCCAAAAATCTACTC 58.155 43.478 0.00 0.00 0.00 2.59
5097 5368 4.929146 ACTAGCACCCCAAAAATCTACT 57.071 40.909 0.00 0.00 0.00 2.57
5098 5369 4.094442 CGAACTAGCACCCCAAAAATCTAC 59.906 45.833 0.00 0.00 0.00 2.59
5099 5370 4.258543 CGAACTAGCACCCCAAAAATCTA 58.741 43.478 0.00 0.00 0.00 1.98
5100 5371 3.081804 CGAACTAGCACCCCAAAAATCT 58.918 45.455 0.00 0.00 0.00 2.40
5101 5372 2.163613 CCGAACTAGCACCCCAAAAATC 59.836 50.000 0.00 0.00 0.00 2.17
5102 5373 2.167662 CCGAACTAGCACCCCAAAAAT 58.832 47.619 0.00 0.00 0.00 1.82
5103 5374 1.143277 TCCGAACTAGCACCCCAAAAA 59.857 47.619 0.00 0.00 0.00 1.94
5104 5375 0.766131 TCCGAACTAGCACCCCAAAA 59.234 50.000 0.00 0.00 0.00 2.44
5105 5376 0.035739 GTCCGAACTAGCACCCCAAA 59.964 55.000 0.00 0.00 0.00 3.28
5106 5377 1.122632 TGTCCGAACTAGCACCCCAA 61.123 55.000 0.00 0.00 0.00 4.12
5107 5378 0.907704 ATGTCCGAACTAGCACCCCA 60.908 55.000 0.00 0.00 0.00 4.96
5108 5379 0.462047 CATGTCCGAACTAGCACCCC 60.462 60.000 0.00 0.00 0.00 4.95
5109 5380 0.462047 CCATGTCCGAACTAGCACCC 60.462 60.000 0.00 0.00 0.00 4.61
5110 5381 0.462047 CCCATGTCCGAACTAGCACC 60.462 60.000 0.00 0.00 0.00 5.01
5111 5382 0.535335 TCCCATGTCCGAACTAGCAC 59.465 55.000 0.00 0.00 0.00 4.40
5112 5383 0.535335 GTCCCATGTCCGAACTAGCA 59.465 55.000 0.00 0.00 0.00 3.49
5113 5384 0.535335 TGTCCCATGTCCGAACTAGC 59.465 55.000 0.00 0.00 0.00 3.42
5114 5385 2.430694 TCATGTCCCATGTCCGAACTAG 59.569 50.000 4.30 0.00 0.00 2.57
5115 5386 2.462723 TCATGTCCCATGTCCGAACTA 58.537 47.619 4.30 0.00 0.00 2.24
5116 5387 1.275666 TCATGTCCCATGTCCGAACT 58.724 50.000 4.30 0.00 0.00 3.01
5117 5388 2.332063 ATCATGTCCCATGTCCGAAC 57.668 50.000 4.30 0.00 0.00 3.95
5118 5389 2.421388 GGAATCATGTCCCATGTCCGAA 60.421 50.000 4.30 0.00 0.00 4.30
5119 5390 1.140852 GGAATCATGTCCCATGTCCGA 59.859 52.381 4.30 0.00 0.00 4.55
5120 5391 1.141657 AGGAATCATGTCCCATGTCCG 59.858 52.381 4.30 0.00 38.59 4.79
5121 5392 2.954318 CAAGGAATCATGTCCCATGTCC 59.046 50.000 4.30 5.24 38.59 4.02
5122 5393 3.624777 ACAAGGAATCATGTCCCATGTC 58.375 45.455 4.30 0.00 38.59 3.06
5123 5394 3.010472 TGACAAGGAATCATGTCCCATGT 59.990 43.478 13.41 9.76 44.16 3.21
5124 5395 3.623703 TGACAAGGAATCATGTCCCATG 58.376 45.455 13.41 0.00 44.16 3.66
5125 5396 4.320546 TTGACAAGGAATCATGTCCCAT 57.679 40.909 13.41 0.00 44.16 4.00
5126 5397 3.805066 TTGACAAGGAATCATGTCCCA 57.195 42.857 13.41 1.42 44.16 4.37
5127 5398 4.766891 TCTTTTGACAAGGAATCATGTCCC 59.233 41.667 13.41 0.00 44.16 4.46
5128 5399 5.964958 TCTTTTGACAAGGAATCATGTCC 57.035 39.130 13.41 0.00 44.16 4.02
5129 5400 6.810182 CCAATCTTTTGACAAGGAATCATGTC 59.190 38.462 10.31 10.31 44.84 3.06
5130 5401 6.295462 CCCAATCTTTTGACAAGGAATCATGT 60.295 38.462 0.00 0.00 34.60 3.21
5131 5402 6.103997 CCCAATCTTTTGACAAGGAATCATG 58.896 40.000 0.00 0.00 34.60 3.07
5132 5403 5.781818 ACCCAATCTTTTGACAAGGAATCAT 59.218 36.000 0.00 0.00 34.60 2.45
5133 5404 5.010922 CACCCAATCTTTTGACAAGGAATCA 59.989 40.000 0.00 0.00 34.60 2.57
5134 5405 5.243730 TCACCCAATCTTTTGACAAGGAATC 59.756 40.000 0.00 0.00 34.60 2.52
5135 5406 5.147032 TCACCCAATCTTTTGACAAGGAAT 58.853 37.500 0.00 0.00 34.60 3.01
5136 5407 4.541705 TCACCCAATCTTTTGACAAGGAA 58.458 39.130 0.00 0.00 34.60 3.36
5137 5408 4.177537 TCACCCAATCTTTTGACAAGGA 57.822 40.909 0.00 0.00 34.60 3.36
5138 5409 4.099266 TGTTCACCCAATCTTTTGACAAGG 59.901 41.667 0.00 0.00 34.60 3.61
5139 5410 5.261209 TGTTCACCCAATCTTTTGACAAG 57.739 39.130 0.00 0.00 34.60 3.16
5140 5411 5.186797 AGTTGTTCACCCAATCTTTTGACAA 59.813 36.000 0.00 0.00 34.60 3.18
5141 5412 4.709397 AGTTGTTCACCCAATCTTTTGACA 59.291 37.500 0.00 0.00 34.60 3.58
5142 5413 5.262588 AGTTGTTCACCCAATCTTTTGAC 57.737 39.130 0.00 0.00 34.60 3.18
5143 5414 7.004086 AGATAGTTGTTCACCCAATCTTTTGA 58.996 34.615 0.00 0.00 34.60 2.69
5144 5415 7.219484 AGATAGTTGTTCACCCAATCTTTTG 57.781 36.000 0.00 0.00 0.00 2.44
5145 5416 7.839680 AAGATAGTTGTTCACCCAATCTTTT 57.160 32.000 0.00 0.00 30.84 2.27
5146 5417 7.839680 AAAGATAGTTGTTCACCCAATCTTT 57.160 32.000 0.00 0.00 36.23 2.52
5147 5418 7.839680 AAAAGATAGTTGTTCACCCAATCTT 57.160 32.000 0.00 0.00 33.99 2.40
5148 5419 7.839680 AAAAAGATAGTTGTTCACCCAATCT 57.160 32.000 0.00 0.00 0.00 2.40
5169 5440 2.034939 TGAGACGACGAGCAGGTAAAAA 59.965 45.455 0.00 0.00 0.00 1.94
5170 5441 1.610038 TGAGACGACGAGCAGGTAAAA 59.390 47.619 0.00 0.00 0.00 1.52
5171 5442 1.199327 CTGAGACGACGAGCAGGTAAA 59.801 52.381 0.00 0.00 0.00 2.01
5172 5443 0.803117 CTGAGACGACGAGCAGGTAA 59.197 55.000 0.00 0.00 0.00 2.85
5173 5444 0.036671 TCTGAGACGACGAGCAGGTA 60.037 55.000 0.00 0.00 0.00 3.08
5174 5445 0.678366 ATCTGAGACGACGAGCAGGT 60.678 55.000 0.00 0.00 0.00 4.00
5175 5446 0.028770 GATCTGAGACGACGAGCAGG 59.971 60.000 0.00 0.00 0.00 4.85
5176 5447 1.013596 AGATCTGAGACGACGAGCAG 58.986 55.000 0.00 5.96 0.00 4.24
5177 5448 0.729690 CAGATCTGAGACGACGAGCA 59.270 55.000 18.34 0.00 0.00 4.26
5178 5449 0.591236 GCAGATCTGAGACGACGAGC 60.591 60.000 27.04 2.58 0.00 5.03
5179 5450 0.315788 CGCAGATCTGAGACGACGAG 60.316 60.000 27.04 0.00 31.84 4.18
5180 5451 1.716172 CGCAGATCTGAGACGACGA 59.284 57.895 27.04 0.00 31.84 4.20
5181 5452 1.936880 GCGCAGATCTGAGACGACG 60.937 63.158 28.08 19.53 31.84 5.12
5182 5453 1.936880 CGCGCAGATCTGAGACGAC 60.937 63.158 28.08 15.10 34.24 4.34
5183 5454 2.405191 CGCGCAGATCTGAGACGA 59.595 61.111 28.08 0.00 34.24 4.20
5184 5455 2.653448 CCGCGCAGATCTGAGACG 60.653 66.667 28.08 26.13 31.84 4.18
5185 5456 2.279120 CCCGCGCAGATCTGAGAC 60.279 66.667 28.08 17.86 31.84 3.36
5186 5457 2.440247 TCCCGCGCAGATCTGAGA 60.440 61.111 28.08 12.09 31.84 3.27
5187 5458 2.027314 CTCCCGCGCAGATCTGAG 59.973 66.667 27.04 23.81 0.00 3.35
5188 5459 3.531207 CCTCCCGCGCAGATCTGA 61.531 66.667 27.04 3.01 0.00 3.27
5189 5460 3.531207 TCCTCCCGCGCAGATCTG 61.531 66.667 18.84 18.84 0.00 2.90
5190 5461 3.532155 GTCCTCCCGCGCAGATCT 61.532 66.667 8.75 0.00 0.00 2.75
5191 5462 4.933064 CGTCCTCCCGCGCAGATC 62.933 72.222 8.75 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.