Multiple sequence alignment - TraesCS5B01G253900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G253900 chr5B 100.000 4469 0 0 1 4469 436463093 436467561 0.000000e+00 8253.0
1 TraesCS5B01G253900 chr5B 77.211 294 59 8 1617 1905 437568168 437568458 9.950000e-37 165.0
2 TraesCS5B01G253900 chr5B 90.722 97 7 2 2088 2182 218214339 218214243 1.300000e-25 128.0
3 TraesCS5B01G253900 chr5B 92.135 89 6 1 2089 2176 69131883 69131971 1.690000e-24 124.0
4 TraesCS5B01G253900 chr5B 77.473 182 39 2 1683 1863 436616270 436616450 1.700000e-19 108.0
5 TraesCS5B01G253900 chr5B 86.000 100 10 4 1799 1896 436560241 436560338 2.200000e-18 104.0
6 TraesCS5B01G253900 chr5A 89.344 2346 156 36 2174 4469 470997140 470994839 0.000000e+00 2861.0
7 TraesCS5B01G253900 chr5A 92.903 1395 48 25 719 2093 470998502 470997139 0.000000e+00 1980.0
8 TraesCS5B01G253900 chr5A 83.648 159 20 6 1751 1905 471473635 471473791 1.300000e-30 145.0
9 TraesCS5B01G253900 chr4B 90.196 102 8 2 2080 2180 130615548 130615648 1.010000e-26 132.0
10 TraesCS5B01G253900 chr5D 91.489 94 6 2 2088 2180 238386515 238386607 1.300000e-25 128.0
11 TraesCS5B01G253900 chr5D 78.022 182 38 2 1683 1863 368824527 368824707 3.650000e-21 113.0
12 TraesCS5B01G253900 chr3A 80.838 167 28 4 4306 4469 646505873 646506038 1.300000e-25 128.0
13 TraesCS5B01G253900 chr3A 89.583 96 7 3 2088 2182 83229970 83230063 7.850000e-23 119.0
14 TraesCS5B01G253900 chr3B 92.135 89 6 1 2092 2179 323357069 323357157 1.690000e-24 124.0
15 TraesCS5B01G253900 chr7B 87.619 105 9 4 2082 2183 190259997 190259894 7.850000e-23 119.0
16 TraesCS5B01G253900 chr3D 88.119 101 8 4 2084 2182 534687042 534687140 2.820000e-22 117.0
17 TraesCS5B01G253900 chr1D 86.792 106 10 4 2075 2176 191290009 191289904 1.020000e-21 115.0
18 TraesCS5B01G253900 chr6D 81.679 131 22 2 4341 4469 2052637 2052507 1.700000e-19 108.0
19 TraesCS5B01G253900 chr1A 82.114 123 18 4 4037 4157 278678718 278678838 7.910000e-18 102.0
20 TraesCS5B01G253900 chr6B 78.788 99 18 3 4364 4461 704036936 704037032 3.730000e-06 63.9
21 TraesCS5B01G253900 chr7D 94.872 39 2 0 303 341 461953927 461953889 1.340000e-05 62.1
22 TraesCS5B01G253900 chr7D 85.965 57 4 3 275 329 29804336 29804390 1.740000e-04 58.4
23 TraesCS5B01G253900 chr2B 85.965 57 7 1 4378 4433 753669353 753669409 4.830000e-05 60.2
24 TraesCS5B01G253900 chr6A 92.308 39 3 0 303 341 595026744 595026706 6.240000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G253900 chr5B 436463093 436467561 4468 False 8253.0 8253 100.0000 1 4469 1 chr5B.!!$F2 4468
1 TraesCS5B01G253900 chr5A 470994839 470998502 3663 True 2420.5 2861 91.1235 719 4469 2 chr5A.!!$R1 3750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
214 215 0.035534 TGGGCTGAAAAGCGCTATGA 60.036 50.0 12.05 0.00 46.16 2.15 F
494 495 0.037697 TCATAAGTCCGCAACGCACT 60.038 50.0 0.00 0.00 0.00 4.40 F
708 709 0.109086 CTACTCCACGTGTCCTGCTG 60.109 60.0 15.65 0.00 0.00 4.41 F
1270 1275 0.166597 CGCGATGCAAACTCACATGT 59.833 50.0 0.00 0.00 0.00 3.21 F
2611 2640 0.400594 GGTCTGTTGTGTTAGGGCCT 59.599 55.0 12.58 12.58 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1080 1085 0.109272 TGCTTTGCGTCGAGGAGTAG 60.109 55.0 9.75 3.14 0.00 2.57 R
1794 1806 0.453793 AGCGTCTCATCTTCAGGTCG 59.546 55.0 0.00 0.00 0.00 4.79 R
2650 2679 0.446222 TGCGCGCTAAAGGTTCAATC 59.554 50.0 33.29 0.00 0.00 2.67 R
3136 3165 0.171903 CTGCACAATGGGTTGCTAGC 59.828 55.0 8.10 8.10 38.96 3.42 R
4368 4436 0.031449 CGGTTTTCACCCGCAATTGT 59.969 50.0 7.40 0.00 40.52 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.184304 TCTATATGAAAAGAAGAGCTCCTACC 57.816 38.462 10.93 0.00 0.00 3.18
43 44 3.594603 TGAAAAGAAGAGCTCCTACCG 57.405 47.619 10.93 0.00 0.00 4.02
44 45 2.233922 TGAAAAGAAGAGCTCCTACCGG 59.766 50.000 10.93 0.00 0.00 5.28
45 46 2.233305 AAAGAAGAGCTCCTACCGGA 57.767 50.000 9.46 0.00 37.82 5.14
67 68 3.629548 CCGGTTACTCGGGGAAAAA 57.370 52.632 0.00 0.00 45.78 1.94
101 102 5.401531 TCTATAAAGAAGTGAAGGCGTGT 57.598 39.130 0.00 0.00 0.00 4.49
102 103 5.168569 TCTATAAAGAAGTGAAGGCGTGTG 58.831 41.667 0.00 0.00 0.00 3.82
103 104 2.038387 AAAGAAGTGAAGGCGTGTGT 57.962 45.000 0.00 0.00 0.00 3.72
104 105 2.038387 AAGAAGTGAAGGCGTGTGTT 57.962 45.000 0.00 0.00 0.00 3.32
105 106 1.299541 AGAAGTGAAGGCGTGTGTTG 58.700 50.000 0.00 0.00 0.00 3.33
106 107 0.307760 GAAGTGAAGGCGTGTGTTGG 59.692 55.000 0.00 0.00 0.00 3.77
107 108 1.724582 AAGTGAAGGCGTGTGTTGGC 61.725 55.000 0.00 0.00 0.00 4.52
112 113 2.594592 GGCGTGTGTTGGCCTTCT 60.595 61.111 3.32 0.00 45.93 2.85
113 114 2.193536 GGCGTGTGTTGGCCTTCTT 61.194 57.895 3.32 0.00 45.93 2.52
114 115 1.733526 GCGTGTGTTGGCCTTCTTT 59.266 52.632 3.32 0.00 0.00 2.52
115 116 0.102300 GCGTGTGTTGGCCTTCTTTT 59.898 50.000 3.32 0.00 0.00 2.27
116 117 1.470805 GCGTGTGTTGGCCTTCTTTTT 60.471 47.619 3.32 0.00 0.00 1.94
135 136 5.432885 TTTTTCTTCGGATGAGTTGGAAC 57.567 39.130 0.00 0.00 0.00 3.62
136 137 2.762535 TCTTCGGATGAGTTGGAACC 57.237 50.000 0.00 0.00 0.00 3.62
137 138 1.067142 TCTTCGGATGAGTTGGAACCG 60.067 52.381 0.00 0.00 44.09 4.44
138 139 0.682852 TTCGGATGAGTTGGAACCGT 59.317 50.000 0.00 0.00 43.36 4.83
139 140 1.548081 TCGGATGAGTTGGAACCGTA 58.452 50.000 0.00 0.00 43.36 4.02
140 141 1.475280 TCGGATGAGTTGGAACCGTAG 59.525 52.381 0.00 0.00 43.36 3.51
154 155 3.967886 CGTAGGTCTGGCGATTGAT 57.032 52.632 0.00 0.00 0.00 2.57
155 156 2.225068 CGTAGGTCTGGCGATTGATT 57.775 50.000 0.00 0.00 0.00 2.57
156 157 2.550978 CGTAGGTCTGGCGATTGATTT 58.449 47.619 0.00 0.00 0.00 2.17
157 158 2.936498 CGTAGGTCTGGCGATTGATTTT 59.064 45.455 0.00 0.00 0.00 1.82
158 159 4.116961 CGTAGGTCTGGCGATTGATTTTA 58.883 43.478 0.00 0.00 0.00 1.52
159 160 4.025979 CGTAGGTCTGGCGATTGATTTTAC 60.026 45.833 0.00 0.00 0.00 2.01
160 161 3.950397 AGGTCTGGCGATTGATTTTACA 58.050 40.909 0.00 0.00 0.00 2.41
161 162 4.526970 AGGTCTGGCGATTGATTTTACAT 58.473 39.130 0.00 0.00 0.00 2.29
162 163 4.336433 AGGTCTGGCGATTGATTTTACATG 59.664 41.667 0.00 0.00 0.00 3.21
163 164 4.037690 GTCTGGCGATTGATTTTACATGC 58.962 43.478 0.00 0.00 0.00 4.06
164 165 3.066621 TCTGGCGATTGATTTTACATGCC 59.933 43.478 0.00 0.00 41.56 4.40
165 166 2.223456 TGGCGATTGATTTTACATGCCG 60.223 45.455 0.00 0.00 44.07 5.69
166 167 2.032799 GGCGATTGATTTTACATGCCGA 59.967 45.455 0.00 0.00 0.00 5.54
167 168 3.304659 GGCGATTGATTTTACATGCCGAT 60.305 43.478 0.00 0.00 0.00 4.18
168 169 4.290155 GCGATTGATTTTACATGCCGATT 58.710 39.130 0.00 0.00 0.00 3.34
169 170 4.739716 GCGATTGATTTTACATGCCGATTT 59.260 37.500 0.00 0.00 0.00 2.17
170 171 5.231991 GCGATTGATTTTACATGCCGATTTT 59.768 36.000 0.00 0.00 0.00 1.82
171 172 6.416455 GCGATTGATTTTACATGCCGATTTTA 59.584 34.615 0.00 0.00 0.00 1.52
172 173 7.357532 GCGATTGATTTTACATGCCGATTTTAG 60.358 37.037 0.00 0.00 0.00 1.85
173 174 7.357532 CGATTGATTTTACATGCCGATTTTAGC 60.358 37.037 0.00 0.00 0.00 3.09
174 175 5.270083 TGATTTTACATGCCGATTTTAGCG 58.730 37.500 0.00 0.00 0.00 4.26
175 176 2.748461 TTACATGCCGATTTTAGCGC 57.252 45.000 0.00 0.00 0.00 5.92
176 177 0.941542 TACATGCCGATTTTAGCGCC 59.058 50.000 2.29 0.00 0.00 6.53
177 178 0.748005 ACATGCCGATTTTAGCGCCT 60.748 50.000 2.29 0.00 0.00 5.52
178 179 1.225855 CATGCCGATTTTAGCGCCTA 58.774 50.000 2.29 0.00 0.00 3.93
179 180 1.806542 CATGCCGATTTTAGCGCCTAT 59.193 47.619 2.29 0.00 0.00 2.57
180 181 1.508632 TGCCGATTTTAGCGCCTATC 58.491 50.000 2.29 0.91 0.00 2.08
181 182 1.202592 TGCCGATTTTAGCGCCTATCA 60.203 47.619 2.29 0.00 0.00 2.15
182 183 2.076863 GCCGATTTTAGCGCCTATCAT 58.923 47.619 2.29 0.00 0.00 2.45
183 184 3.259064 GCCGATTTTAGCGCCTATCATA 58.741 45.455 2.29 0.00 0.00 2.15
184 185 3.871594 GCCGATTTTAGCGCCTATCATAT 59.128 43.478 2.29 0.00 0.00 1.78
185 186 4.332819 GCCGATTTTAGCGCCTATCATATT 59.667 41.667 2.29 0.00 0.00 1.28
186 187 5.727791 GCCGATTTTAGCGCCTATCATATTG 60.728 44.000 2.29 0.00 0.00 1.90
187 188 5.258622 CGATTTTAGCGCCTATCATATTGC 58.741 41.667 2.29 0.00 0.00 3.56
188 189 5.063944 CGATTTTAGCGCCTATCATATTGCT 59.936 40.000 2.29 0.00 36.51 3.91
189 190 5.862924 TTTTAGCGCCTATCATATTGCTC 57.137 39.130 2.29 0.00 34.08 4.26
190 191 4.535526 TTAGCGCCTATCATATTGCTCA 57.464 40.909 2.29 0.00 34.08 4.26
191 192 2.969990 AGCGCCTATCATATTGCTCAG 58.030 47.619 2.29 0.00 0.00 3.35
192 193 2.301296 AGCGCCTATCATATTGCTCAGT 59.699 45.455 2.29 0.00 0.00 3.41
193 194 2.414481 GCGCCTATCATATTGCTCAGTG 59.586 50.000 0.00 0.00 0.00 3.66
194 195 3.657634 CGCCTATCATATTGCTCAGTGT 58.342 45.455 0.00 0.00 0.00 3.55
195 196 4.060900 CGCCTATCATATTGCTCAGTGTT 58.939 43.478 0.00 0.00 0.00 3.32
196 197 4.084171 CGCCTATCATATTGCTCAGTGTTG 60.084 45.833 0.00 0.00 0.00 3.33
197 198 4.214971 GCCTATCATATTGCTCAGTGTTGG 59.785 45.833 0.00 0.00 0.00 3.77
198 199 4.758674 CCTATCATATTGCTCAGTGTTGGG 59.241 45.833 0.00 0.00 0.00 4.12
207 208 1.000938 CTCAGTGTTGGGCTGAAAAGC 60.001 52.381 0.00 0.00 41.74 3.51
208 209 0.318107 CAGTGTTGGGCTGAAAAGCG 60.318 55.000 0.00 0.00 36.12 4.68
209 210 1.661509 GTGTTGGGCTGAAAAGCGC 60.662 57.895 0.00 0.00 46.18 5.92
210 211 1.827789 TGTTGGGCTGAAAAGCGCT 60.828 52.632 2.64 2.64 46.16 5.92
211 212 0.536233 TGTTGGGCTGAAAAGCGCTA 60.536 50.000 12.05 5.69 46.16 4.26
212 213 0.811281 GTTGGGCTGAAAAGCGCTAT 59.189 50.000 12.05 1.76 46.16 2.97
213 214 0.810648 TTGGGCTGAAAAGCGCTATG 59.189 50.000 12.05 0.01 46.16 2.23
214 215 0.035534 TGGGCTGAAAAGCGCTATGA 60.036 50.000 12.05 0.00 46.16 2.15
215 216 0.659957 GGGCTGAAAAGCGCTATGAG 59.340 55.000 12.05 7.89 43.25 2.90
216 217 0.659957 GGCTGAAAAGCGCTATGAGG 59.340 55.000 12.05 2.48 35.24 3.86
217 218 1.656652 GCTGAAAAGCGCTATGAGGA 58.343 50.000 12.05 0.00 0.00 3.71
218 219 2.216898 GCTGAAAAGCGCTATGAGGAT 58.783 47.619 12.05 0.00 0.00 3.24
219 220 2.615912 GCTGAAAAGCGCTATGAGGATT 59.384 45.455 12.05 0.00 0.00 3.01
220 221 3.065925 GCTGAAAAGCGCTATGAGGATTT 59.934 43.478 12.05 5.33 0.00 2.17
221 222 4.273480 GCTGAAAAGCGCTATGAGGATTTA 59.727 41.667 12.05 0.00 0.00 1.40
222 223 5.220854 GCTGAAAAGCGCTATGAGGATTTAA 60.221 40.000 12.05 0.00 0.00 1.52
223 224 6.514048 GCTGAAAAGCGCTATGAGGATTTAAT 60.514 38.462 12.05 0.00 0.00 1.40
224 225 7.333528 TGAAAAGCGCTATGAGGATTTAATT 57.666 32.000 12.05 0.00 0.00 1.40
225 226 7.195646 TGAAAAGCGCTATGAGGATTTAATTG 58.804 34.615 12.05 0.00 0.00 2.32
226 227 6.699575 AAAGCGCTATGAGGATTTAATTGT 57.300 33.333 12.05 0.00 0.00 2.71
227 228 6.699575 AAGCGCTATGAGGATTTAATTGTT 57.300 33.333 12.05 0.00 0.00 2.83
228 229 6.699575 AGCGCTATGAGGATTTAATTGTTT 57.300 33.333 8.99 0.00 0.00 2.83
229 230 7.801716 AGCGCTATGAGGATTTAATTGTTTA 57.198 32.000 8.99 0.00 0.00 2.01
230 231 8.396272 AGCGCTATGAGGATTTAATTGTTTAT 57.604 30.769 8.99 0.00 0.00 1.40
231 232 8.850156 AGCGCTATGAGGATTTAATTGTTTATT 58.150 29.630 8.99 0.00 0.00 1.40
232 233 9.463443 GCGCTATGAGGATTTAATTGTTTATTT 57.537 29.630 0.00 0.00 0.00 1.40
262 263 9.959749 TGTATTTATTTTCTTCTTCTTTTGCGT 57.040 25.926 0.00 0.00 0.00 5.24
265 266 8.560576 TTTATTTTCTTCTTCTTTTGCGTCTG 57.439 30.769 0.00 0.00 0.00 3.51
266 267 5.560966 TTTTCTTCTTCTTTTGCGTCTGT 57.439 34.783 0.00 0.00 0.00 3.41
267 268 4.795970 TTCTTCTTCTTTTGCGTCTGTC 57.204 40.909 0.00 0.00 0.00 3.51
268 269 4.060038 TCTTCTTCTTTTGCGTCTGTCT 57.940 40.909 0.00 0.00 0.00 3.41
269 270 5.196341 TCTTCTTCTTTTGCGTCTGTCTA 57.804 39.130 0.00 0.00 0.00 2.59
270 271 5.597806 TCTTCTTCTTTTGCGTCTGTCTAA 58.402 37.500 0.00 0.00 0.00 2.10
271 272 5.692204 TCTTCTTCTTTTGCGTCTGTCTAAG 59.308 40.000 0.00 0.00 0.00 2.18
272 273 3.741344 TCTTCTTTTGCGTCTGTCTAAGC 59.259 43.478 0.00 0.00 0.00 3.09
273 274 2.058798 TCTTTTGCGTCTGTCTAAGCG 58.941 47.619 0.00 0.00 0.00 4.68
274 275 0.511221 TTTTGCGTCTGTCTAAGCGC 59.489 50.000 0.00 0.00 45.58 5.92
275 276 1.289109 TTTGCGTCTGTCTAAGCGCC 61.289 55.000 2.29 0.00 45.12 6.53
276 277 2.126071 GCGTCTGTCTAAGCGCCA 60.126 61.111 2.29 0.00 42.12 5.69
277 278 1.519455 GCGTCTGTCTAAGCGCCAT 60.519 57.895 2.29 0.00 42.12 4.40
278 279 1.756375 GCGTCTGTCTAAGCGCCATG 61.756 60.000 2.29 0.00 42.12 3.66
279 280 1.756375 CGTCTGTCTAAGCGCCATGC 61.756 60.000 2.29 0.00 46.98 4.06
295 296 2.572290 CATGCAATGGAGATGCTCTCA 58.428 47.619 13.06 0.00 45.12 3.27
296 297 2.793288 TGCAATGGAGATGCTCTCAA 57.207 45.000 13.06 4.61 45.12 3.02
297 298 3.292492 TGCAATGGAGATGCTCTCAAT 57.708 42.857 13.06 6.43 45.12 2.57
298 299 3.211865 TGCAATGGAGATGCTCTCAATC 58.788 45.455 13.06 0.00 45.12 2.67
299 300 3.118000 TGCAATGGAGATGCTCTCAATCT 60.118 43.478 13.06 0.05 45.12 2.40
300 301 3.251245 GCAATGGAGATGCTCTCAATCTG 59.749 47.826 13.06 9.85 45.12 2.90
301 302 4.704965 CAATGGAGATGCTCTCAATCTGA 58.295 43.478 13.06 0.00 45.12 3.27
302 303 5.309638 CAATGGAGATGCTCTCAATCTGAT 58.690 41.667 13.06 0.00 45.12 2.90
303 304 4.603989 TGGAGATGCTCTCAATCTGATC 57.396 45.455 13.06 0.00 45.12 2.92
304 305 3.965347 TGGAGATGCTCTCAATCTGATCA 59.035 43.478 13.06 0.00 45.12 2.92
305 306 4.593634 TGGAGATGCTCTCAATCTGATCAT 59.406 41.667 13.06 0.00 45.12 2.45
306 307 5.778750 TGGAGATGCTCTCAATCTGATCATA 59.221 40.000 13.06 0.00 45.12 2.15
307 308 6.071278 TGGAGATGCTCTCAATCTGATCATAG 60.071 42.308 13.06 0.00 45.12 2.23
308 309 6.071221 GGAGATGCTCTCAATCTGATCATAGT 60.071 42.308 13.06 0.00 45.12 2.12
309 310 6.693466 AGATGCTCTCAATCTGATCATAGTG 58.307 40.000 0.00 0.00 0.00 2.74
310 311 6.494146 AGATGCTCTCAATCTGATCATAGTGA 59.506 38.462 10.33 10.33 0.00 3.41
311 312 6.086785 TGCTCTCAATCTGATCATAGTGAG 57.913 41.667 24.60 24.60 35.01 3.51
312 313 5.832060 TGCTCTCAATCTGATCATAGTGAGA 59.168 40.000 28.48 28.48 39.24 3.27
316 317 8.986929 TCTCAATCTGATCATAGTGAGAGTAA 57.013 34.615 27.45 12.92 37.25 2.24
317 318 8.845227 TCTCAATCTGATCATAGTGAGAGTAAC 58.155 37.037 27.45 0.00 37.25 2.50
318 319 8.759481 TCAATCTGATCATAGTGAGAGTAACT 57.241 34.615 7.10 0.00 0.00 2.24
319 320 9.194972 TCAATCTGATCATAGTGAGAGTAACTT 57.805 33.333 7.10 0.00 0.00 2.66
322 323 8.160521 TCTGATCATAGTGAGAGTAACTTAGC 57.839 38.462 0.00 0.00 0.00 3.09
323 324 7.996066 TCTGATCATAGTGAGAGTAACTTAGCT 59.004 37.037 0.00 0.00 0.00 3.32
324 325 9.278978 CTGATCATAGTGAGAGTAACTTAGCTA 57.721 37.037 0.00 0.00 0.00 3.32
325 326 9.278978 TGATCATAGTGAGAGTAACTTAGCTAG 57.721 37.037 0.00 0.00 0.00 3.42
326 327 9.280174 GATCATAGTGAGAGTAACTTAGCTAGT 57.720 37.037 0.00 0.00 39.32 2.57
356 357 9.762933 AAAGTACATTTGCTTTATGTGACAAAT 57.237 25.926 0.00 0.00 41.98 2.32
359 360 9.840427 GTACATTTGCTTTATGTGACAAATAGT 57.160 29.630 0.00 0.00 39.92 2.12
383 384 9.480053 AGTTAATGATGAAAAAGATGTTTGTGG 57.520 29.630 0.00 0.00 0.00 4.17
384 385 9.474920 GTTAATGATGAAAAAGATGTTTGTGGA 57.525 29.630 0.00 0.00 0.00 4.02
386 387 8.961294 AATGATGAAAAAGATGTTTGTGGAAA 57.039 26.923 0.00 0.00 0.00 3.13
387 388 7.769272 TGATGAAAAAGATGTTTGTGGAAAC 57.231 32.000 0.00 0.00 41.72 2.78
438 439 9.199184 CAAACTAATAAATATGACGATATGCGC 57.801 33.333 0.00 0.00 46.04 6.09
439 440 8.703604 AACTAATAAATATGACGATATGCGCT 57.296 30.769 9.73 0.00 46.04 5.92
440 441 9.797556 AACTAATAAATATGACGATATGCGCTA 57.202 29.630 9.73 0.00 46.04 4.26
441 442 9.234384 ACTAATAAATATGACGATATGCGCTAC 57.766 33.333 9.73 0.00 46.04 3.58
442 443 6.733721 ATAAATATGACGATATGCGCTACG 57.266 37.500 9.73 11.47 46.04 3.51
443 444 3.759527 ATATGACGATATGCGCTACGT 57.240 42.857 9.73 14.71 46.04 3.57
444 445 4.870221 ATATGACGATATGCGCTACGTA 57.130 40.909 9.73 0.00 46.04 3.57
445 446 2.589338 TGACGATATGCGCTACGTAG 57.411 50.000 18.47 18.47 46.04 3.51
446 447 1.196127 TGACGATATGCGCTACGTAGG 59.804 52.381 23.47 14.40 46.04 3.18
447 448 1.196354 GACGATATGCGCTACGTAGGT 59.804 52.381 23.47 10.28 46.04 3.08
448 449 2.413112 GACGATATGCGCTACGTAGGTA 59.587 50.000 23.47 13.34 46.04 3.08
449 450 2.807967 ACGATATGCGCTACGTAGGTAA 59.192 45.455 23.47 7.63 46.04 2.85
450 451 3.438087 ACGATATGCGCTACGTAGGTAAT 59.562 43.478 23.47 13.10 46.04 1.89
451 452 4.631377 ACGATATGCGCTACGTAGGTAATA 59.369 41.667 23.47 14.46 46.04 0.98
452 453 5.122239 ACGATATGCGCTACGTAGGTAATAA 59.878 40.000 23.47 5.13 46.04 1.40
453 454 6.183360 ACGATATGCGCTACGTAGGTAATAAT 60.183 38.462 23.47 8.90 46.04 1.28
454 455 6.690098 CGATATGCGCTACGTAGGTAATAATT 59.310 38.462 23.47 2.06 0.00 1.40
455 456 7.219535 CGATATGCGCTACGTAGGTAATAATTT 59.780 37.037 23.47 1.45 0.00 1.82
456 457 9.507280 GATATGCGCTACGTAGGTAATAATTTA 57.493 33.333 23.47 3.38 0.00 1.40
457 458 7.807687 ATGCGCTACGTAGGTAATAATTTAG 57.192 36.000 23.47 0.00 0.00 1.85
458 459 6.969366 TGCGCTACGTAGGTAATAATTTAGA 58.031 36.000 23.47 0.00 0.00 2.10
459 460 7.596494 TGCGCTACGTAGGTAATAATTTAGAT 58.404 34.615 23.47 0.00 0.00 1.98
460 461 8.084073 TGCGCTACGTAGGTAATAATTTAGATT 58.916 33.333 23.47 0.00 0.00 2.40
461 462 9.559958 GCGCTACGTAGGTAATAATTTAGATTA 57.440 33.333 23.47 0.00 32.56 1.75
486 487 8.311650 AGTGTCATATTTTATCATAAGTCCGC 57.688 34.615 0.00 0.00 0.00 5.54
487 488 7.931407 AGTGTCATATTTTATCATAAGTCCGCA 59.069 33.333 0.00 0.00 0.00 5.69
488 489 8.556194 GTGTCATATTTTATCATAAGTCCGCAA 58.444 33.333 0.00 0.00 0.00 4.85
489 490 8.556194 TGTCATATTTTATCATAAGTCCGCAAC 58.444 33.333 0.00 0.00 0.00 4.17
490 491 7.740346 GTCATATTTTATCATAAGTCCGCAACG 59.260 37.037 0.00 0.00 0.00 4.10
491 492 3.936902 TTTATCATAAGTCCGCAACGC 57.063 42.857 0.00 0.00 0.00 4.84
492 493 2.588027 TATCATAAGTCCGCAACGCA 57.412 45.000 0.00 0.00 0.00 5.24
493 494 1.006832 ATCATAAGTCCGCAACGCAC 58.993 50.000 0.00 0.00 0.00 5.34
494 495 0.037697 TCATAAGTCCGCAACGCACT 60.038 50.000 0.00 0.00 0.00 4.40
495 496 0.796312 CATAAGTCCGCAACGCACTT 59.204 50.000 1.60 1.60 34.68 3.16
496 497 0.796312 ATAAGTCCGCAACGCACTTG 59.204 50.000 6.57 0.00 32.56 3.16
497 498 0.249531 TAAGTCCGCAACGCACTTGA 60.250 50.000 6.57 0.00 32.56 3.02
498 499 1.498865 AAGTCCGCAACGCACTTGAG 61.499 55.000 0.00 0.00 30.42 3.02
500 501 4.389576 CCGCAACGCACTTGAGGC 62.390 66.667 1.61 0.00 42.23 4.70
501 502 3.648982 CGCAACGCACTTGAGGCA 61.649 61.111 0.00 0.00 30.42 4.75
502 503 2.721231 GCAACGCACTTGAGGCAA 59.279 55.556 0.00 0.00 30.42 4.52
503 504 1.065600 GCAACGCACTTGAGGCAAA 59.934 52.632 0.00 0.00 30.42 3.68
504 505 0.527385 GCAACGCACTTGAGGCAAAA 60.527 50.000 0.00 0.00 30.42 2.44
505 506 1.869342 GCAACGCACTTGAGGCAAAAT 60.869 47.619 0.00 0.00 30.42 1.82
506 507 1.788308 CAACGCACTTGAGGCAAAATG 59.212 47.619 0.00 0.00 30.42 2.32
507 508 1.317613 ACGCACTTGAGGCAAAATGA 58.682 45.000 0.00 0.00 0.00 2.57
508 509 1.267806 ACGCACTTGAGGCAAAATGAG 59.732 47.619 0.00 0.00 0.00 2.90
509 510 1.401931 CGCACTTGAGGCAAAATGAGG 60.402 52.381 0.00 0.00 0.00 3.86
510 511 1.888512 GCACTTGAGGCAAAATGAGGA 59.111 47.619 0.00 0.00 0.00 3.71
511 512 2.494870 GCACTTGAGGCAAAATGAGGAT 59.505 45.455 0.00 0.00 0.00 3.24
512 513 3.696051 GCACTTGAGGCAAAATGAGGATA 59.304 43.478 0.00 0.00 0.00 2.59
513 514 4.439289 GCACTTGAGGCAAAATGAGGATAC 60.439 45.833 0.00 0.00 0.00 2.24
514 515 4.701651 CACTTGAGGCAAAATGAGGATACA 59.298 41.667 0.00 0.00 41.41 2.29
515 516 5.183713 CACTTGAGGCAAAATGAGGATACAA 59.816 40.000 0.00 0.00 41.41 2.41
516 517 5.416952 ACTTGAGGCAAAATGAGGATACAAG 59.583 40.000 0.00 0.00 41.41 3.16
517 518 3.696051 TGAGGCAAAATGAGGATACAAGC 59.304 43.478 0.00 0.00 41.41 4.01
518 519 3.950395 GAGGCAAAATGAGGATACAAGCT 59.050 43.478 0.00 0.00 41.41 3.74
519 520 5.116084 AGGCAAAATGAGGATACAAGCTA 57.884 39.130 0.00 0.00 41.41 3.32
520 521 5.699143 AGGCAAAATGAGGATACAAGCTAT 58.301 37.500 0.00 0.00 41.41 2.97
521 522 6.841601 AGGCAAAATGAGGATACAAGCTATA 58.158 36.000 0.00 0.00 41.41 1.31
522 523 7.290061 AGGCAAAATGAGGATACAAGCTATAA 58.710 34.615 0.00 0.00 41.41 0.98
523 524 7.229506 AGGCAAAATGAGGATACAAGCTATAAC 59.770 37.037 0.00 0.00 41.41 1.89
524 525 7.013274 GGCAAAATGAGGATACAAGCTATAACA 59.987 37.037 0.00 0.00 41.41 2.41
525 526 8.405531 GCAAAATGAGGATACAAGCTATAACAA 58.594 33.333 0.00 0.00 41.41 2.83
528 529 8.854614 AATGAGGATACAAGCTATAACAATCC 57.145 34.615 0.00 0.00 41.41 3.01
529 530 7.373617 TGAGGATACAAGCTATAACAATCCA 57.626 36.000 10.99 0.00 35.02 3.41
530 531 7.801104 TGAGGATACAAGCTATAACAATCCAA 58.199 34.615 10.99 0.47 35.02 3.53
531 532 8.271458 TGAGGATACAAGCTATAACAATCCAAA 58.729 33.333 10.99 0.22 35.02 3.28
532 533 8.451908 AGGATACAAGCTATAACAATCCAAAC 57.548 34.615 10.99 0.00 35.02 2.93
533 534 8.052748 AGGATACAAGCTATAACAATCCAAACA 58.947 33.333 10.99 0.00 35.02 2.83
534 535 8.850156 GGATACAAGCTATAACAATCCAAACAT 58.150 33.333 0.00 0.00 33.22 2.71
570 571 6.497785 ACAATTATCTACTATCTCGGTCCG 57.502 41.667 4.39 4.39 0.00 4.79
571 572 6.236409 ACAATTATCTACTATCTCGGTCCGA 58.764 40.000 14.54 14.54 0.00 4.55
572 573 6.713903 ACAATTATCTACTATCTCGGTCCGAA 59.286 38.462 16.23 7.01 34.74 4.30
573 574 7.230108 ACAATTATCTACTATCTCGGTCCGAAA 59.770 37.037 16.23 1.51 34.74 3.46
574 575 7.756395 ATTATCTACTATCTCGGTCCGAAAA 57.244 36.000 16.23 6.96 34.74 2.29
575 576 7.756395 TTATCTACTATCTCGGTCCGAAAAT 57.244 36.000 16.23 13.82 34.74 1.82
576 577 8.853077 TTATCTACTATCTCGGTCCGAAAATA 57.147 34.615 16.23 14.19 34.74 1.40
577 578 7.756395 ATCTACTATCTCGGTCCGAAAATAA 57.244 36.000 16.23 2.34 34.74 1.40
578 579 7.199541 TCTACTATCTCGGTCCGAAAATAAG 57.800 40.000 16.23 10.64 34.74 1.73
579 580 5.848833 ACTATCTCGGTCCGAAAATAAGT 57.151 39.130 16.23 11.24 34.74 2.24
580 581 5.589192 ACTATCTCGGTCCGAAAATAAGTG 58.411 41.667 16.23 7.30 34.74 3.16
581 582 3.947910 TCTCGGTCCGAAAATAAGTGT 57.052 42.857 16.23 0.00 34.74 3.55
582 583 4.261578 TCTCGGTCCGAAAATAAGTGTT 57.738 40.909 16.23 0.00 34.74 3.32
583 584 4.634199 TCTCGGTCCGAAAATAAGTGTTT 58.366 39.130 16.23 0.00 34.74 2.83
584 585 5.782047 TCTCGGTCCGAAAATAAGTGTTTA 58.218 37.500 16.23 0.00 34.74 2.01
585 586 6.222389 TCTCGGTCCGAAAATAAGTGTTTAA 58.778 36.000 16.23 0.00 34.74 1.52
586 587 6.875195 TCTCGGTCCGAAAATAAGTGTTTAAT 59.125 34.615 16.23 0.00 34.74 1.40
587 588 7.388500 TCTCGGTCCGAAAATAAGTGTTTAATT 59.612 33.333 16.23 0.00 34.74 1.40
588 589 7.520686 TCGGTCCGAAAATAAGTGTTTAATTC 58.479 34.615 12.68 0.00 31.06 2.17
589 590 7.388500 TCGGTCCGAAAATAAGTGTTTAATTCT 59.612 33.333 12.68 0.00 31.06 2.40
590 591 8.019094 CGGTCCGAAAATAAGTGTTTAATTCTT 58.981 33.333 4.91 0.00 0.00 2.52
591 592 9.687210 GGTCCGAAAATAAGTGTTTAATTCTTT 57.313 29.630 0.00 0.00 0.00 2.52
667 668 9.747293 AAAACTCTAACTCTAGTACACTTTGAC 57.253 33.333 0.00 0.00 0.00 3.18
668 669 8.694581 AACTCTAACTCTAGTACACTTTGACT 57.305 34.615 0.00 0.00 0.00 3.41
669 670 9.790344 AACTCTAACTCTAGTACACTTTGACTA 57.210 33.333 0.00 0.00 0.00 2.59
670 671 9.962809 ACTCTAACTCTAGTACACTTTGACTAT 57.037 33.333 0.00 0.00 0.00 2.12
699 700 8.970859 AATAGTATTGTACTACTACTCCACGT 57.029 34.615 4.59 0.00 43.46 4.49
700 701 6.674694 AGTATTGTACTACTACTCCACGTG 57.325 41.667 9.08 9.08 37.23 4.49
701 702 6.176183 AGTATTGTACTACTACTCCACGTGT 58.824 40.000 15.65 0.00 37.23 4.49
702 703 5.557891 ATTGTACTACTACTCCACGTGTC 57.442 43.478 15.65 0.00 0.00 3.67
703 704 3.338249 TGTACTACTACTCCACGTGTCC 58.662 50.000 15.65 0.00 0.00 4.02
704 705 2.875094 ACTACTACTCCACGTGTCCT 57.125 50.000 15.65 0.00 0.00 3.85
705 706 2.434428 ACTACTACTCCACGTGTCCTG 58.566 52.381 15.65 3.92 0.00 3.86
706 707 1.132643 CTACTACTCCACGTGTCCTGC 59.867 57.143 15.65 0.00 0.00 4.85
707 708 0.539901 ACTACTCCACGTGTCCTGCT 60.540 55.000 15.65 0.00 0.00 4.24
708 709 0.109086 CTACTCCACGTGTCCTGCTG 60.109 60.000 15.65 0.00 0.00 4.41
709 710 0.826256 TACTCCACGTGTCCTGCTGT 60.826 55.000 15.65 4.91 0.00 4.40
710 711 1.373497 CTCCACGTGTCCTGCTGTC 60.373 63.158 15.65 0.00 0.00 3.51
711 712 2.357517 CCACGTGTCCTGCTGTCC 60.358 66.667 15.65 0.00 0.00 4.02
712 713 2.421314 CACGTGTCCTGCTGTCCA 59.579 61.111 7.58 0.00 0.00 4.02
713 714 1.956170 CACGTGTCCTGCTGTCCAC 60.956 63.158 7.58 0.00 0.00 4.02
714 715 2.357517 CGTGTCCTGCTGTCCACC 60.358 66.667 4.90 0.00 0.00 4.61
715 716 2.828868 GTGTCCTGCTGTCCACCA 59.171 61.111 0.00 0.00 0.00 4.17
716 717 1.376466 GTGTCCTGCTGTCCACCAT 59.624 57.895 0.00 0.00 0.00 3.55
717 718 0.613260 GTGTCCTGCTGTCCACCATA 59.387 55.000 0.00 0.00 0.00 2.74
718 719 1.003118 GTGTCCTGCTGTCCACCATAA 59.997 52.381 0.00 0.00 0.00 1.90
719 720 1.003118 TGTCCTGCTGTCCACCATAAC 59.997 52.381 0.00 0.00 0.00 1.89
720 721 1.279271 GTCCTGCTGTCCACCATAACT 59.721 52.381 0.00 0.00 0.00 2.24
721 722 2.500098 GTCCTGCTGTCCACCATAACTA 59.500 50.000 0.00 0.00 0.00 2.24
722 723 2.500098 TCCTGCTGTCCACCATAACTAC 59.500 50.000 0.00 0.00 0.00 2.73
723 724 2.540515 CTGCTGTCCACCATAACTACG 58.459 52.381 0.00 0.00 0.00 3.51
724 725 1.897133 TGCTGTCCACCATAACTACGT 59.103 47.619 0.00 0.00 0.00 3.57
725 726 2.268298 GCTGTCCACCATAACTACGTG 58.732 52.381 0.00 0.00 0.00 4.49
1012 1017 2.046285 CAGGCGATGGGGTTTGACC 61.046 63.158 0.00 0.00 37.60 4.02
1013 1018 2.034999 GGCGATGGGGTTTGACCA 59.965 61.111 0.00 0.00 41.02 4.02
1021 1026 0.771755 GGGGTTTGACCAGAAGGAGT 59.228 55.000 0.00 0.00 41.02 3.85
1027 1032 3.991536 GACCAGAAGGAGTCGGCGC 62.992 68.421 0.00 0.00 38.69 6.53
1080 1085 0.536006 AGGTGAAGTGGCTGAAGCAC 60.536 55.000 4.43 1.16 44.36 4.40
1093 1098 0.523757 GAAGCACTACTCCTCGACGC 60.524 60.000 0.00 0.00 0.00 5.19
1216 1221 5.960811 TCCTATGGTCTGTTCATCTTCTTCT 59.039 40.000 0.00 0.00 0.00 2.85
1217 1222 6.441924 TCCTATGGTCTGTTCATCTTCTTCTT 59.558 38.462 0.00 0.00 0.00 2.52
1218 1223 6.760770 CCTATGGTCTGTTCATCTTCTTCTTC 59.239 42.308 0.00 0.00 0.00 2.87
1270 1275 0.166597 CGCGATGCAAACTCACATGT 59.833 50.000 0.00 0.00 0.00 3.21
1290 1295 3.589735 TGTCCCTCCCTTGTTAAATGCTA 59.410 43.478 0.00 0.00 0.00 3.49
1300 1305 8.050325 TCCCTTGTTAAATGCTAGCACTAAATA 58.950 33.333 22.07 9.62 0.00 1.40
1301 1306 8.345565 CCCTTGTTAAATGCTAGCACTAAATAG 58.654 37.037 22.07 17.63 0.00 1.73
1302 1307 8.893727 CCTTGTTAAATGCTAGCACTAAATAGT 58.106 33.333 22.07 0.00 36.90 2.12
1305 1310 9.542462 TGTTAAATGCTAGCACTAAATAGTAGG 57.458 33.333 22.07 0.00 34.13 3.18
1306 1311 9.760077 GTTAAATGCTAGCACTAAATAGTAGGA 57.240 33.333 22.07 0.00 34.13 2.94
1307 1312 9.982651 TTAAATGCTAGCACTAAATAGTAGGAG 57.017 33.333 22.07 0.00 34.13 3.69
1308 1313 7.604657 AATGCTAGCACTAAATAGTAGGAGT 57.395 36.000 22.07 0.00 34.13 3.85
1309 1314 8.707796 AATGCTAGCACTAAATAGTAGGAGTA 57.292 34.615 22.07 0.00 34.13 2.59
1330 1335 7.484324 GGAGTAAGTAACACTAGTAAAGAAGCG 59.516 40.741 0.00 0.00 0.00 4.68
1367 1373 5.906113 TTGGCCTTAATTTGCGATTTCTA 57.094 34.783 3.32 0.00 0.00 2.10
1377 1383 4.487714 TTGCGATTTCTAGATGGGAACT 57.512 40.909 0.00 0.00 0.00 3.01
1434 1445 8.523523 TTGTGAACATTCATATTCAGCAAAAG 57.476 30.769 0.00 0.00 39.73 2.27
1441 1452 8.416329 ACATTCATATTCAGCAAAAGGAATACC 58.584 33.333 0.00 0.00 38.43 2.73
1442 1453 7.953005 TTCATATTCAGCAAAAGGAATACCA 57.047 32.000 0.00 0.00 38.43 3.25
1450 1461 4.079787 AGCAAAAGGAATACCATCAGCCTA 60.080 41.667 0.00 0.00 38.94 3.93
1458 1469 5.105146 GGAATACCATCAGCCTACCTCATAG 60.105 48.000 0.00 0.00 35.97 2.23
1483 1494 5.399113 AGTGCCCCTTTTTACCTTCATAAA 58.601 37.500 0.00 0.00 0.00 1.40
1487 1498 6.014925 TGCCCCTTTTTACCTTCATAAAGAAC 60.015 38.462 0.00 0.00 34.14 3.01
1508 1519 6.551227 AGAACCCTTTTTATGTCAGCTTCTTT 59.449 34.615 0.00 0.00 0.00 2.52
1520 1531 6.725246 TGTCAGCTTCTTTAGTAAAAGTTGC 58.275 36.000 6.39 4.69 42.36 4.17
1554 1565 7.208225 GGAAGTATCCTATTTGCTCCATTTC 57.792 40.000 0.00 0.00 42.93 2.17
1598 1610 9.410556 GCTGCTTAACTTAAAATCTCAAATTGA 57.589 29.630 0.00 0.00 0.00 2.57
1633 1645 9.829507 TTTTTAGGATTTTGTGATCATTGTTGT 57.170 25.926 0.00 0.00 0.00 3.32
1704 1716 1.516603 GGCTCTGACGCGGAAGTAC 60.517 63.158 12.47 4.11 0.00 2.73
1794 1806 5.123820 TGCCAATACTATGAAGCTTCACAAC 59.876 40.000 30.66 12.92 40.49 3.32
1830 1842 1.927174 CGCTTCGATCGGATTGTCTTT 59.073 47.619 16.41 0.00 0.00 2.52
1868 1880 3.958147 GGGTTCAAAGGAAAAGAAGACCA 59.042 43.478 0.00 0.00 34.13 4.02
1921 1933 8.615878 TCTTTGTTAGTTGCTGCTAGATTTTA 57.384 30.769 0.00 0.00 0.00 1.52
2011 2026 7.124052 AGTTAGTAGAGTATTCCTAAGGCACA 58.876 38.462 0.00 0.00 0.00 4.57
2014 2029 7.768807 AGTAGAGTATTCCTAAGGCACATAG 57.231 40.000 0.00 0.00 0.00 2.23
2015 2030 5.476091 AGAGTATTCCTAAGGCACATAGC 57.524 43.478 0.00 0.00 44.65 2.97
2069 2089 8.691661 TTCTTTTAGAAAACCTGTAAGCAGAT 57.308 30.769 0.00 0.00 36.74 2.90
2084 2104 4.794278 AGCAGATGCAAATGACATTGAA 57.206 36.364 7.68 0.00 45.16 2.69
2100 2120 9.658799 ATGACATTGAATATAAATACTCCCTCG 57.341 33.333 0.00 0.00 0.00 4.63
2101 2121 8.094548 TGACATTGAATATAAATACTCCCTCGG 58.905 37.037 0.00 0.00 0.00 4.63
2102 2122 7.974504 ACATTGAATATAAATACTCCCTCGGT 58.025 34.615 0.00 0.00 0.00 4.69
2103 2123 8.095169 ACATTGAATATAAATACTCCCTCGGTC 58.905 37.037 0.00 0.00 0.00 4.79
2104 2124 6.600882 TGAATATAAATACTCCCTCGGTCC 57.399 41.667 0.00 0.00 0.00 4.46
2105 2125 6.320518 TGAATATAAATACTCCCTCGGTCCT 58.679 40.000 0.00 0.00 0.00 3.85
2106 2126 7.472741 TGAATATAAATACTCCCTCGGTCCTA 58.527 38.462 0.00 0.00 0.00 2.94
2107 2127 8.120538 TGAATATAAATACTCCCTCGGTCCTAT 58.879 37.037 0.00 0.00 0.00 2.57
2108 2128 9.638176 GAATATAAATACTCCCTCGGTCCTATA 57.362 37.037 0.00 0.00 0.00 1.31
2115 2135 9.643735 AATACTCCCTCGGTCCTATAATATAAG 57.356 37.037 0.00 0.00 0.00 1.73
2116 2136 7.281366 ACTCCCTCGGTCCTATAATATAAGA 57.719 40.000 0.00 0.00 0.00 2.10
2117 2137 7.118060 ACTCCCTCGGTCCTATAATATAAGAC 58.882 42.308 1.37 1.37 0.00 3.01
2118 2138 6.118170 TCCCTCGGTCCTATAATATAAGACG 58.882 44.000 3.70 0.93 0.00 4.18
2119 2139 5.221009 CCCTCGGTCCTATAATATAAGACGC 60.221 48.000 3.70 0.00 0.00 5.19
2120 2140 5.589452 CCTCGGTCCTATAATATAAGACGCT 59.411 44.000 3.70 0.00 0.00 5.07
2121 2141 6.095160 CCTCGGTCCTATAATATAAGACGCTT 59.905 42.308 3.70 0.00 0.00 4.68
2122 2142 7.362747 CCTCGGTCCTATAATATAAGACGCTTT 60.363 40.741 3.70 0.00 0.00 3.51
2123 2143 7.889469 TCGGTCCTATAATATAAGACGCTTTT 58.111 34.615 3.70 0.00 0.00 2.27
2124 2144 8.362639 TCGGTCCTATAATATAAGACGCTTTTT 58.637 33.333 3.70 0.00 0.00 1.94
2125 2145 8.433126 CGGTCCTATAATATAAGACGCTTTTTG 58.567 37.037 3.70 0.00 0.00 2.44
2126 2146 9.485206 GGTCCTATAATATAAGACGCTTTTTGA 57.515 33.333 3.70 0.00 0.00 2.69
2133 2153 8.542497 AATATAAGACGCTTTTTGACACTACA 57.458 30.769 0.00 0.00 0.00 2.74
2134 2154 4.531659 AAGACGCTTTTTGACACTACAC 57.468 40.909 0.00 0.00 0.00 2.90
2135 2155 3.793559 AGACGCTTTTTGACACTACACT 58.206 40.909 0.00 0.00 0.00 3.55
2136 2156 4.940463 AGACGCTTTTTGACACTACACTA 58.060 39.130 0.00 0.00 0.00 2.74
2137 2157 4.982916 AGACGCTTTTTGACACTACACTAG 59.017 41.667 0.00 0.00 0.00 2.57
2138 2158 4.690122 ACGCTTTTTGACACTACACTAGT 58.310 39.130 0.00 0.00 40.28 2.57
2170 2190 6.716934 ATGTCTTACATTATGAGACGGAGT 57.283 37.500 0.00 0.00 44.98 3.85
2171 2191 7.818997 ATGTCTTACATTATGAGACGGAGTA 57.181 36.000 0.00 0.00 44.98 2.59
2172 2192 7.877003 ATGTCTTACATTATGAGACGGAGTAG 58.123 38.462 0.00 0.00 44.98 2.57
2257 2277 6.809196 ACTACTGAACTTATTTTGAGCTCTCG 59.191 38.462 16.19 0.62 0.00 4.04
2269 2289 2.288186 TGAGCTCTCGATCGTCACATAC 59.712 50.000 16.19 3.80 0.00 2.39
2278 2298 6.206829 TCTCGATCGTCACATACTTCCATAAT 59.793 38.462 15.94 0.00 0.00 1.28
2281 2301 5.984233 TCGTCACATACTTCCATAATTGC 57.016 39.130 0.00 0.00 0.00 3.56
2298 2318 1.508632 TGCAAACGAACTGTAGGAGC 58.491 50.000 0.00 0.00 0.00 4.70
2317 2338 6.006449 AGGAGCAGTTTGTTCAATTCTGTAT 58.994 36.000 14.34 7.95 28.47 2.29
2332 2353 8.439971 TCAATTCTGTATATTTGCATCTACCCT 58.560 33.333 0.00 0.00 0.00 4.34
2335 2356 8.450578 TTCTGTATATTTGCATCTACCCTTTG 57.549 34.615 0.00 0.00 0.00 2.77
2386 2415 2.298610 TCTATGTGCCCACTCTCTACG 58.701 52.381 0.00 0.00 0.00 3.51
2499 2528 9.444600 TGGTTTGACCATAAGTATCTTAACTTC 57.555 33.333 0.00 0.00 44.79 3.01
2500 2529 9.668497 GGTTTGACCATAAGTATCTTAACTTCT 57.332 33.333 0.00 0.00 38.24 2.85
2515 2544 1.202580 ACTTCTGTCTGACAGTGCCAC 60.203 52.381 30.74 0.00 46.03 5.01
2531 2560 4.527038 AGTGCCACTAAAGTAGTTAGCTGA 59.473 41.667 0.00 0.00 42.75 4.26
2544 2573 9.740710 AAGTAGTTAGCTGATGGTTTCTTATTT 57.259 29.630 0.00 0.00 0.00 1.40
2602 2631 7.956420 TGTACTGTTATAAAGGTCTGTTGTG 57.044 36.000 0.00 0.00 0.00 3.33
2611 2640 0.400594 GGTCTGTTGTGTTAGGGCCT 59.599 55.000 12.58 12.58 0.00 5.19
2650 2679 3.599730 TGATACTGACCTTCTGTGCTG 57.400 47.619 0.00 0.00 31.00 4.41
2831 2860 5.941948 AAGGTTGATCAAGTTAGTTTCCG 57.058 39.130 8.80 0.00 0.00 4.30
2832 2861 4.324267 AGGTTGATCAAGTTAGTTTCCGG 58.676 43.478 8.80 0.00 0.00 5.14
2936 2965 7.939782 TGCACTTTCAAATTTTGTATCAGAGA 58.060 30.769 8.89 0.00 0.00 3.10
2954 2983 5.299531 TCAGAGACTCGAAGAAACTGAAGAA 59.700 40.000 0.00 0.00 34.09 2.52
2957 2986 5.848406 AGACTCGAAGAAACTGAAGAATGT 58.152 37.500 0.00 0.00 34.09 2.71
3064 3093 0.672342 TTACGGCCTCGGATTAGCTC 59.328 55.000 0.00 0.00 41.39 4.09
3087 3116 0.958822 GGCATGAACCGTGTTTTCCT 59.041 50.000 0.00 0.00 0.00 3.36
3091 3120 3.628017 CATGAACCGTGTTTTCCTGTTC 58.372 45.455 0.00 0.00 36.67 3.18
3098 3127 0.871722 TGTTTTCCTGTTCGCATCGG 59.128 50.000 0.00 0.00 0.00 4.18
3128 3157 2.644299 TGGCTTCTCCTTCCTTTGATCA 59.356 45.455 0.00 0.00 35.26 2.92
3136 3165 2.029623 CTTCCTTTGATCAGCATGGGG 58.970 52.381 0.00 0.00 36.16 4.96
3171 3200 1.725665 CAGCATTGCAGGGTCATCG 59.274 57.895 11.91 0.00 0.00 3.84
3173 3202 3.113745 CATTGCAGGGTCATCGCC 58.886 61.111 0.00 0.00 0.00 5.54
3285 3314 0.666577 GCGTCGGCTACTCACACTTT 60.667 55.000 0.00 0.00 35.83 2.66
3300 3329 2.290960 ACACTTTGCCTGGGAATACCTC 60.291 50.000 0.08 0.00 41.11 3.85
3301 3330 1.065418 ACTTTGCCTGGGAATACCTCG 60.065 52.381 0.08 0.00 41.11 4.63
3307 3336 1.133262 CCTGGGAATACCTCGGGAGTA 60.133 57.143 0.00 0.00 41.11 2.59
3330 3359 0.461548 TCAGGGAGTATGAAGCGCAG 59.538 55.000 11.47 0.00 0.00 5.18
3341 3370 0.737219 GAAGCGCAGAGGCAAATGAT 59.263 50.000 11.47 0.00 41.24 2.45
3361 3390 2.032528 CCGGAGCAAGAGCAACCA 59.967 61.111 0.00 0.00 45.49 3.67
3391 3420 3.051081 ACTCTGTCTTGCTGGAACATC 57.949 47.619 0.00 0.00 38.20 3.06
3400 3429 1.372087 GCTGGAACATCGCTTCAGGG 61.372 60.000 0.00 0.00 38.20 4.45
3440 3469 2.046507 CCAGGAGTGGCTGCAGAC 60.047 66.667 20.43 17.52 36.89 3.51
3441 3470 2.433838 CAGGAGTGGCTGCAGACG 60.434 66.667 20.43 0.00 0.00 4.18
3456 3485 3.521308 GACGGCGGTTGTGTTGCAG 62.521 63.158 13.24 0.00 0.00 4.41
3477 3506 1.189403 GTAGACGTTGAAGGATCGCG 58.811 55.000 0.00 0.00 34.26 5.87
3478 3507 0.524816 TAGACGTTGAAGGATCGCGC 60.525 55.000 0.00 0.00 32.24 6.86
3493 3522 0.526954 CGCGCGGAGGTATAAGTGTT 60.527 55.000 24.84 0.00 0.00 3.32
3529 3558 7.877097 AGGATCACTAGATATTTCAAGATGTGC 59.123 37.037 0.00 0.00 33.72 4.57
3530 3559 7.118971 GGATCACTAGATATTTCAAGATGTGCC 59.881 40.741 0.00 0.00 33.72 5.01
3540 3569 1.662629 CAAGATGTGCCGTGTCATCTC 59.337 52.381 11.76 0.00 46.47 2.75
3541 3570 0.897621 AGATGTGCCGTGTCATCTCA 59.102 50.000 7.37 0.00 44.78 3.27
3545 3574 3.541996 TGTGCCGTGTCATCTCATATT 57.458 42.857 0.00 0.00 0.00 1.28
3546 3575 3.872696 TGTGCCGTGTCATCTCATATTT 58.127 40.909 0.00 0.00 0.00 1.40
3598 3627 1.202114 CACGCAGGGCATTTTGTGTAT 59.798 47.619 0.00 0.00 36.36 2.29
3614 3643 5.132897 TGTGTATTGGGAATGCTGTTTTC 57.867 39.130 0.00 0.00 0.00 2.29
3625 3654 2.494059 TGCTGTTTTCTCTACCTGTGC 58.506 47.619 0.00 0.00 0.00 4.57
3628 3657 3.733337 CTGTTTTCTCTACCTGTGCAGT 58.267 45.455 0.00 0.00 0.00 4.40
3629 3658 3.466836 TGTTTTCTCTACCTGTGCAGTG 58.533 45.455 0.00 0.00 0.00 3.66
3636 3665 4.772624 TCTCTACCTGTGCAGTGTAAAGAT 59.227 41.667 0.00 0.00 0.00 2.40
3641 3670 4.755123 ACCTGTGCAGTGTAAAGATGTAAC 59.245 41.667 0.00 0.00 0.00 2.50
3720 3749 8.958119 TTGTTATCTCAATTATCACTGGTACC 57.042 34.615 4.43 4.43 0.00 3.34
3739 3768 0.248743 CGCGCCTAAGATGTAACCGA 60.249 55.000 0.00 0.00 0.00 4.69
3764 3818 1.469251 GGCAGTGATTGATGCTTGCAG 60.469 52.381 0.87 0.00 42.19 4.41
3766 3820 2.094906 GCAGTGATTGATGCTTGCAGAA 60.095 45.455 0.87 0.00 39.38 3.02
3769 3823 5.677852 GCAGTGATTGATGCTTGCAGAAATA 60.678 40.000 0.87 0.00 39.38 1.40
3800 3854 4.437390 CGAACCGGATCAATCTCTTTTTGG 60.437 45.833 9.46 0.00 0.00 3.28
3803 3857 4.884164 ACCGGATCAATCTCTTTTTGGATC 59.116 41.667 9.46 0.00 0.00 3.36
3812 3866 7.607607 TCAATCTCTTTTTGGATCGAAGATCAA 59.392 33.333 11.53 0.00 45.12 2.57
3840 3894 4.453480 TCTTCCCTGGTGACTGATTTTT 57.547 40.909 0.00 0.00 0.00 1.94
3910 3965 3.504134 TCGGGTCAACCATGTTGTATTTG 59.496 43.478 6.83 0.00 40.22 2.32
3911 3966 3.366883 CGGGTCAACCATGTTGTATTTGG 60.367 47.826 6.83 0.00 40.22 3.28
3912 3967 3.584834 GGTCAACCATGTTGTATTTGGC 58.415 45.455 6.83 0.00 33.66 4.52
3913 3968 3.584834 GTCAACCATGTTGTATTTGGCC 58.415 45.455 0.00 0.00 33.66 5.36
3914 3969 2.564947 TCAACCATGTTGTATTTGGCCC 59.435 45.455 0.00 0.00 33.66 5.80
3915 3970 2.566724 CAACCATGTTGTATTTGGCCCT 59.433 45.455 0.00 0.00 33.66 5.19
3916 3971 3.748645 ACCATGTTGTATTTGGCCCTA 57.251 42.857 0.00 0.00 33.66 3.53
3917 3972 3.361786 ACCATGTTGTATTTGGCCCTAC 58.638 45.455 0.00 0.00 33.66 3.18
3918 3973 3.011257 ACCATGTTGTATTTGGCCCTACT 59.989 43.478 0.00 0.00 33.66 2.57
3919 3974 3.632145 CCATGTTGTATTTGGCCCTACTC 59.368 47.826 0.00 0.00 0.00 2.59
3920 3975 4.526970 CATGTTGTATTTGGCCCTACTCT 58.473 43.478 0.00 0.00 0.00 3.24
3921 3976 3.950397 TGTTGTATTTGGCCCTACTCTG 58.050 45.455 0.00 0.00 0.00 3.35
3922 3977 3.585289 TGTTGTATTTGGCCCTACTCTGA 59.415 43.478 0.00 0.00 0.00 3.27
3923 3978 4.227300 TGTTGTATTTGGCCCTACTCTGAT 59.773 41.667 0.00 0.00 0.00 2.90
3932 3987 3.135530 GGCCCTACTCTGATCTTGTTCAT 59.864 47.826 0.00 0.00 0.00 2.57
3957 4012 4.079558 TCAGAACGACTATAAGGTACCCCT 60.080 45.833 8.74 0.00 45.63 4.79
3965 4020 3.066198 AGGTACCCCTTGTGACGC 58.934 61.111 8.74 0.00 38.13 5.19
3968 4023 1.079336 GTACCCCTTGTGACGCCTC 60.079 63.158 0.00 0.00 0.00 4.70
3969 4024 2.288025 TACCCCTTGTGACGCCTCC 61.288 63.158 0.00 0.00 0.00 4.30
3994 4061 3.136009 GGTGTAAAACCTAGTGCCACT 57.864 47.619 1.54 1.54 46.55 4.00
3995 4062 3.483421 GGTGTAAAACCTAGTGCCACTT 58.517 45.455 1.02 0.00 46.55 3.16
4021 4088 0.326264 CTACCAAGCCACTGCCTTCT 59.674 55.000 0.00 0.00 38.69 2.85
4032 4099 1.002868 TGCCTTCTCTTCTGCTGCC 60.003 57.895 0.00 0.00 0.00 4.85
4033 4100 1.002868 GCCTTCTCTTCTGCTGCCA 60.003 57.895 0.00 0.00 0.00 4.92
4035 4102 0.676151 CCTTCTCTTCTGCTGCCACC 60.676 60.000 0.00 0.00 0.00 4.61
4125 4192 2.937379 CTTGGATCAGCTGGGGCGAG 62.937 65.000 15.13 3.49 44.37 5.03
4126 4193 4.247380 GGATCAGCTGGGGCGAGG 62.247 72.222 15.13 0.00 44.37 4.63
4127 4194 4.925861 GATCAGCTGGGGCGAGGC 62.926 72.222 15.13 0.00 44.37 4.70
4170 4237 4.424711 GGGCGGCAATCCTGGTCA 62.425 66.667 12.47 0.00 0.00 4.02
4178 4245 4.552365 ATCCTGGTCATGCGGCGG 62.552 66.667 9.78 0.00 0.00 6.13
4228 4295 2.582959 GCGTTCTCTAGCGATGGTG 58.417 57.895 0.00 0.00 0.00 4.17
4231 4298 0.824759 GTTCTCTAGCGATGGTGGGT 59.175 55.000 0.00 0.00 0.00 4.51
4234 4301 2.586079 CTAGCGATGGTGGGTGCG 60.586 66.667 0.00 0.00 0.00 5.34
4272 4339 1.679139 GATCACATCCAAATCGGCCA 58.321 50.000 2.24 0.00 33.14 5.36
4322 4390 2.829458 GAGGGGTCGACGAGGGAG 60.829 72.222 9.92 0.00 0.00 4.30
4330 4398 3.394836 GACGAGGGAGGCAGGCTT 61.395 66.667 0.00 0.00 0.00 4.35
4355 4423 2.279517 GCGATCCGGTAGGTGCTG 60.280 66.667 0.00 0.00 39.05 4.41
4361 4429 1.122632 TCCGGTAGGTGCTGGTTCAA 61.123 55.000 0.00 0.00 39.05 2.69
4365 4433 1.880027 GGTAGGTGCTGGTTCAAAGTG 59.120 52.381 0.00 0.00 0.00 3.16
4368 4436 1.064758 AGGTGCTGGTTCAAAGTGTCA 60.065 47.619 0.00 0.00 0.00 3.58
4376 4444 2.788786 GGTTCAAAGTGTCACAATTGCG 59.211 45.455 5.05 0.00 0.00 4.85
4379 4447 1.066908 CAAAGTGTCACAATTGCGGGT 59.933 47.619 5.05 0.00 0.00 5.28
4386 4454 1.067821 TCACAATTGCGGGTGAAAACC 59.932 47.619 5.05 0.00 40.80 3.27
4393 4461 2.395651 CGGGTGAAAACCGTGTTGA 58.604 52.632 0.00 0.00 46.03 3.18
4395 4463 1.335496 CGGGTGAAAACCGTGTTGATT 59.665 47.619 0.00 0.00 46.03 2.57
4406 4475 1.269174 CGTGTTGATTTGGTCATGGCA 59.731 47.619 0.00 0.00 36.54 4.92
4435 4504 2.049433 CGTCTTGGGCGTCGTCTT 60.049 61.111 0.00 0.00 0.00 3.01
4439 4508 0.319555 TCTTGGGCGTCGTCTTCTTG 60.320 55.000 0.00 0.00 0.00 3.02
4441 4510 0.179067 TTGGGCGTCGTCTTCTTGTT 60.179 50.000 0.00 0.00 0.00 2.83
4442 4511 0.878523 TGGGCGTCGTCTTCTTGTTG 60.879 55.000 0.00 0.00 0.00 3.33
4461 4530 2.777094 TGAAGACATCATCGGTTGCAA 58.223 42.857 0.00 0.00 31.50 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.691362 GTAGGAGCTCTTCTTTTCATATAGAAG 57.309 37.037 14.64 6.63 45.55 2.85
16 17 8.643324 GGTAGGAGCTCTTCTTTTCATATAGAA 58.357 37.037 14.64 0.00 0.00 2.10
17 18 7.040340 CGGTAGGAGCTCTTCTTTTCATATAGA 60.040 40.741 14.64 0.00 0.00 1.98
18 19 7.087639 CGGTAGGAGCTCTTCTTTTCATATAG 58.912 42.308 14.64 0.00 0.00 1.31
19 20 6.015350 CCGGTAGGAGCTCTTCTTTTCATATA 60.015 42.308 14.64 0.00 41.02 0.86
20 21 5.221541 CCGGTAGGAGCTCTTCTTTTCATAT 60.222 44.000 14.64 0.00 41.02 1.78
21 22 4.099573 CCGGTAGGAGCTCTTCTTTTCATA 59.900 45.833 14.64 0.00 41.02 2.15
22 23 3.118592 CCGGTAGGAGCTCTTCTTTTCAT 60.119 47.826 14.64 0.00 41.02 2.57
23 24 2.233922 CCGGTAGGAGCTCTTCTTTTCA 59.766 50.000 14.64 0.00 41.02 2.69
24 25 2.496470 TCCGGTAGGAGCTCTTCTTTTC 59.504 50.000 14.64 0.00 42.75 2.29
25 26 2.537143 TCCGGTAGGAGCTCTTCTTTT 58.463 47.619 14.64 0.00 42.75 2.27
26 27 2.233305 TCCGGTAGGAGCTCTTCTTT 57.767 50.000 14.64 0.00 42.75 2.52
43 44 2.183555 CCGAGTAACCGGCACTCC 59.816 66.667 23.98 11.53 43.25 3.85
78 79 5.637810 CACACGCCTTCACTTCTTTATAGAA 59.362 40.000 0.00 0.00 38.06 2.10
79 80 5.168569 CACACGCCTTCACTTCTTTATAGA 58.831 41.667 0.00 0.00 0.00 1.98
80 81 4.929808 ACACACGCCTTCACTTCTTTATAG 59.070 41.667 0.00 0.00 0.00 1.31
81 82 4.890088 ACACACGCCTTCACTTCTTTATA 58.110 39.130 0.00 0.00 0.00 0.98
82 83 3.740115 ACACACGCCTTCACTTCTTTAT 58.260 40.909 0.00 0.00 0.00 1.40
83 84 3.188159 ACACACGCCTTCACTTCTTTA 57.812 42.857 0.00 0.00 0.00 1.85
84 85 2.038387 ACACACGCCTTCACTTCTTT 57.962 45.000 0.00 0.00 0.00 2.52
85 86 1.670811 CAACACACGCCTTCACTTCTT 59.329 47.619 0.00 0.00 0.00 2.52
86 87 1.299541 CAACACACGCCTTCACTTCT 58.700 50.000 0.00 0.00 0.00 2.85
87 88 0.307760 CCAACACACGCCTTCACTTC 59.692 55.000 0.00 0.00 0.00 3.01
88 89 1.724582 GCCAACACACGCCTTCACTT 61.725 55.000 0.00 0.00 0.00 3.16
89 90 2.186826 GCCAACACACGCCTTCACT 61.187 57.895 0.00 0.00 0.00 3.41
90 91 2.331451 GCCAACACACGCCTTCAC 59.669 61.111 0.00 0.00 0.00 3.18
91 92 2.904866 GGCCAACACACGCCTTCA 60.905 61.111 0.00 0.00 42.21 3.02
95 96 1.734388 AAAGAAGGCCAACACACGCC 61.734 55.000 5.01 0.00 46.09 5.68
96 97 0.102300 AAAAGAAGGCCAACACACGC 59.898 50.000 5.01 0.00 0.00 5.34
97 98 2.577449 AAAAAGAAGGCCAACACACG 57.423 45.000 5.01 0.00 0.00 4.49
113 114 4.277423 GGTTCCAACTCATCCGAAGAAAAA 59.723 41.667 0.00 0.00 0.00 1.94
114 115 3.818773 GGTTCCAACTCATCCGAAGAAAA 59.181 43.478 0.00 0.00 0.00 2.29
115 116 3.408634 GGTTCCAACTCATCCGAAGAAA 58.591 45.455 0.00 0.00 0.00 2.52
116 117 2.611971 CGGTTCCAACTCATCCGAAGAA 60.612 50.000 0.00 0.00 43.22 2.52
117 118 1.067142 CGGTTCCAACTCATCCGAAGA 60.067 52.381 0.00 0.00 43.22 2.87
118 119 1.337823 ACGGTTCCAACTCATCCGAAG 60.338 52.381 8.84 0.00 43.22 3.79
119 120 0.682852 ACGGTTCCAACTCATCCGAA 59.317 50.000 8.84 0.00 43.22 4.30
120 121 1.475280 CTACGGTTCCAACTCATCCGA 59.525 52.381 8.84 0.00 43.22 4.55
121 122 1.470979 CCTACGGTTCCAACTCATCCG 60.471 57.143 0.00 0.00 45.53 4.18
122 123 1.553704 ACCTACGGTTCCAACTCATCC 59.446 52.381 0.00 0.00 27.29 3.51
123 124 2.496470 AGACCTACGGTTCCAACTCATC 59.504 50.000 0.00 0.00 35.25 2.92
124 125 2.233922 CAGACCTACGGTTCCAACTCAT 59.766 50.000 0.00 0.00 35.25 2.90
125 126 1.616865 CAGACCTACGGTTCCAACTCA 59.383 52.381 0.00 0.00 35.25 3.41
126 127 1.067071 CCAGACCTACGGTTCCAACTC 60.067 57.143 0.00 0.00 35.25 3.01
127 128 0.974383 CCAGACCTACGGTTCCAACT 59.026 55.000 0.00 0.00 35.25 3.16
128 129 0.672711 GCCAGACCTACGGTTCCAAC 60.673 60.000 0.00 0.00 35.25 3.77
129 130 1.675219 GCCAGACCTACGGTTCCAA 59.325 57.895 0.00 0.00 35.25 3.53
130 131 2.642254 CGCCAGACCTACGGTTCCA 61.642 63.158 0.00 0.00 35.25 3.53
131 132 1.673808 ATCGCCAGACCTACGGTTCC 61.674 60.000 0.00 0.00 35.25 3.62
132 133 0.175073 AATCGCCAGACCTACGGTTC 59.825 55.000 0.00 0.00 35.25 3.62
133 134 0.108329 CAATCGCCAGACCTACGGTT 60.108 55.000 0.00 0.00 35.25 4.44
134 135 0.968901 TCAATCGCCAGACCTACGGT 60.969 55.000 0.00 0.00 39.44 4.83
135 136 0.389391 ATCAATCGCCAGACCTACGG 59.611 55.000 0.00 0.00 0.00 4.02
136 137 2.225068 AATCAATCGCCAGACCTACG 57.775 50.000 0.00 0.00 0.00 3.51
137 138 4.873827 TGTAAAATCAATCGCCAGACCTAC 59.126 41.667 0.00 0.00 0.00 3.18
138 139 5.092554 TGTAAAATCAATCGCCAGACCTA 57.907 39.130 0.00 0.00 0.00 3.08
139 140 3.950397 TGTAAAATCAATCGCCAGACCT 58.050 40.909 0.00 0.00 0.00 3.85
140 141 4.601019 CATGTAAAATCAATCGCCAGACC 58.399 43.478 0.00 0.00 0.00 3.85
141 142 4.037690 GCATGTAAAATCAATCGCCAGAC 58.962 43.478 0.00 0.00 0.00 3.51
142 143 3.066621 GGCATGTAAAATCAATCGCCAGA 59.933 43.478 0.00 0.00 38.20 3.86
143 144 3.374745 GGCATGTAAAATCAATCGCCAG 58.625 45.455 0.00 0.00 38.20 4.85
144 145 2.223456 CGGCATGTAAAATCAATCGCCA 60.223 45.455 0.00 0.00 38.20 5.69
145 146 2.032799 TCGGCATGTAAAATCAATCGCC 59.967 45.455 0.00 0.00 34.91 5.54
146 147 3.332761 TCGGCATGTAAAATCAATCGC 57.667 42.857 0.00 0.00 0.00 4.58
147 148 6.810888 AAAATCGGCATGTAAAATCAATCG 57.189 33.333 0.00 0.00 0.00 3.34
148 149 7.357532 CGCTAAAATCGGCATGTAAAATCAATC 60.358 37.037 0.00 0.00 0.00 2.67
149 150 6.417635 CGCTAAAATCGGCATGTAAAATCAAT 59.582 34.615 0.00 0.00 0.00 2.57
150 151 5.741510 CGCTAAAATCGGCATGTAAAATCAA 59.258 36.000 0.00 0.00 0.00 2.57
151 152 5.270083 CGCTAAAATCGGCATGTAAAATCA 58.730 37.500 0.00 0.00 0.00 2.57
152 153 4.146443 GCGCTAAAATCGGCATGTAAAATC 59.854 41.667 0.00 0.00 0.00 2.17
153 154 4.041723 GCGCTAAAATCGGCATGTAAAAT 58.958 39.130 0.00 0.00 0.00 1.82
154 155 3.430931 GCGCTAAAATCGGCATGTAAAA 58.569 40.909 0.00 0.00 0.00 1.52
155 156 3.059634 GCGCTAAAATCGGCATGTAAA 57.940 42.857 0.00 0.00 0.00 2.01
156 157 2.748461 GCGCTAAAATCGGCATGTAA 57.252 45.000 0.00 0.00 0.00 2.41
163 164 5.727791 GCAATATGATAGGCGCTAAAATCGG 60.728 44.000 7.64 0.00 0.00 4.18
164 165 5.063944 AGCAATATGATAGGCGCTAAAATCG 59.936 40.000 7.64 0.00 0.00 3.34
165 166 6.092670 TGAGCAATATGATAGGCGCTAAAATC 59.907 38.462 7.64 6.13 0.00 2.17
166 167 5.939883 TGAGCAATATGATAGGCGCTAAAAT 59.060 36.000 7.64 0.00 0.00 1.82
167 168 5.304778 TGAGCAATATGATAGGCGCTAAAA 58.695 37.500 7.64 0.00 0.00 1.52
168 169 4.893608 TGAGCAATATGATAGGCGCTAAA 58.106 39.130 7.64 0.00 0.00 1.85
169 170 4.021104 ACTGAGCAATATGATAGGCGCTAA 60.021 41.667 7.64 0.00 0.00 3.09
170 171 3.511540 ACTGAGCAATATGATAGGCGCTA 59.488 43.478 7.64 0.00 0.00 4.26
171 172 2.301296 ACTGAGCAATATGATAGGCGCT 59.699 45.455 7.64 0.00 0.00 5.92
172 173 2.414481 CACTGAGCAATATGATAGGCGC 59.586 50.000 0.00 0.00 0.00 6.53
173 174 3.657634 ACACTGAGCAATATGATAGGCG 58.342 45.455 0.00 0.00 0.00 5.52
174 175 4.214971 CCAACACTGAGCAATATGATAGGC 59.785 45.833 0.00 0.00 0.00 3.93
175 176 4.758674 CCCAACACTGAGCAATATGATAGG 59.241 45.833 0.00 0.00 0.00 2.57
176 177 4.214971 GCCCAACACTGAGCAATATGATAG 59.785 45.833 0.00 0.00 0.00 2.08
177 178 4.136796 GCCCAACACTGAGCAATATGATA 58.863 43.478 0.00 0.00 0.00 2.15
178 179 2.954318 GCCCAACACTGAGCAATATGAT 59.046 45.455 0.00 0.00 0.00 2.45
179 180 2.025981 AGCCCAACACTGAGCAATATGA 60.026 45.455 0.00 0.00 0.00 2.15
180 181 2.098607 CAGCCCAACACTGAGCAATATG 59.901 50.000 0.00 0.00 37.32 1.78
181 182 2.025981 TCAGCCCAACACTGAGCAATAT 60.026 45.455 0.00 0.00 39.21 1.28
182 183 1.350684 TCAGCCCAACACTGAGCAATA 59.649 47.619 0.00 0.00 39.21 1.90
183 184 0.111061 TCAGCCCAACACTGAGCAAT 59.889 50.000 0.00 0.00 39.21 3.56
184 185 0.106769 TTCAGCCCAACACTGAGCAA 60.107 50.000 0.00 0.00 44.55 3.91
185 186 0.106769 TTTCAGCCCAACACTGAGCA 60.107 50.000 0.00 0.00 44.55 4.26
186 187 1.000938 CTTTTCAGCCCAACACTGAGC 60.001 52.381 0.00 0.00 44.55 4.26
187 188 1.000938 GCTTTTCAGCCCAACACTGAG 60.001 52.381 0.00 0.00 44.55 3.35
188 189 1.032014 GCTTTTCAGCCCAACACTGA 58.968 50.000 0.00 0.00 42.30 3.41
189 190 0.318107 CGCTTTTCAGCCCAACACTG 60.318 55.000 0.00 0.00 44.06 3.66
190 191 2.032981 CGCTTTTCAGCCCAACACT 58.967 52.632 0.00 0.00 44.06 3.55
191 192 1.661509 GCGCTTTTCAGCCCAACAC 60.662 57.895 0.00 0.00 44.06 3.32
192 193 0.536233 TAGCGCTTTTCAGCCCAACA 60.536 50.000 18.68 0.00 44.06 3.33
193 194 0.811281 ATAGCGCTTTTCAGCCCAAC 59.189 50.000 18.68 0.00 44.06 3.77
194 195 0.810648 CATAGCGCTTTTCAGCCCAA 59.189 50.000 18.68 0.00 44.06 4.12
195 196 0.035534 TCATAGCGCTTTTCAGCCCA 60.036 50.000 18.68 0.00 44.06 5.36
196 197 0.659957 CTCATAGCGCTTTTCAGCCC 59.340 55.000 18.68 0.00 44.06 5.19
197 198 0.659957 CCTCATAGCGCTTTTCAGCC 59.340 55.000 18.68 0.00 44.06 4.85
198 199 1.656652 TCCTCATAGCGCTTTTCAGC 58.343 50.000 18.68 0.00 43.41 4.26
199 200 4.889832 AAATCCTCATAGCGCTTTTCAG 57.110 40.909 18.68 6.81 0.00 3.02
200 201 6.942532 ATTAAATCCTCATAGCGCTTTTCA 57.057 33.333 18.68 0.00 0.00 2.69
201 202 7.196331 ACAATTAAATCCTCATAGCGCTTTTC 58.804 34.615 18.68 0.00 0.00 2.29
202 203 7.100458 ACAATTAAATCCTCATAGCGCTTTT 57.900 32.000 18.68 10.96 0.00 2.27
203 204 6.699575 ACAATTAAATCCTCATAGCGCTTT 57.300 33.333 18.68 4.25 0.00 3.51
204 205 6.699575 AACAATTAAATCCTCATAGCGCTT 57.300 33.333 18.68 0.00 0.00 4.68
205 206 6.699575 AAACAATTAAATCCTCATAGCGCT 57.300 33.333 17.26 17.26 0.00 5.92
206 207 9.463443 AAATAAACAATTAAATCCTCATAGCGC 57.537 29.630 0.00 0.00 0.00 5.92
236 237 9.959749 ACGCAAAAGAAGAAGAAAATAAATACA 57.040 25.926 0.00 0.00 0.00 2.29
239 240 9.185192 CAGACGCAAAAGAAGAAGAAAATAAAT 57.815 29.630 0.00 0.00 0.00 1.40
240 241 8.188139 ACAGACGCAAAAGAAGAAGAAAATAAA 58.812 29.630 0.00 0.00 0.00 1.40
241 242 7.703328 ACAGACGCAAAAGAAGAAGAAAATAA 58.297 30.769 0.00 0.00 0.00 1.40
242 243 7.226720 AGACAGACGCAAAAGAAGAAGAAAATA 59.773 33.333 0.00 0.00 0.00 1.40
243 244 6.038714 AGACAGACGCAAAAGAAGAAGAAAAT 59.961 34.615 0.00 0.00 0.00 1.82
244 245 5.354234 AGACAGACGCAAAAGAAGAAGAAAA 59.646 36.000 0.00 0.00 0.00 2.29
245 246 4.876107 AGACAGACGCAAAAGAAGAAGAAA 59.124 37.500 0.00 0.00 0.00 2.52
246 247 4.442706 AGACAGACGCAAAAGAAGAAGAA 58.557 39.130 0.00 0.00 0.00 2.52
247 248 4.060038 AGACAGACGCAAAAGAAGAAGA 57.940 40.909 0.00 0.00 0.00 2.87
248 249 5.613577 GCTTAGACAGACGCAAAAGAAGAAG 60.614 44.000 0.00 0.00 0.00 2.85
249 250 4.211374 GCTTAGACAGACGCAAAAGAAGAA 59.789 41.667 0.00 0.00 0.00 2.52
250 251 3.741344 GCTTAGACAGACGCAAAAGAAGA 59.259 43.478 0.00 0.00 0.00 2.87
251 252 3.422343 CGCTTAGACAGACGCAAAAGAAG 60.422 47.826 0.00 0.00 0.00 2.85
252 253 2.475111 CGCTTAGACAGACGCAAAAGAA 59.525 45.455 0.00 0.00 0.00 2.52
253 254 2.058798 CGCTTAGACAGACGCAAAAGA 58.941 47.619 0.00 0.00 0.00 2.52
254 255 1.462541 GCGCTTAGACAGACGCAAAAG 60.463 52.381 0.00 0.00 43.40 2.27
255 256 0.511221 GCGCTTAGACAGACGCAAAA 59.489 50.000 0.00 0.00 43.40 2.44
256 257 1.289109 GGCGCTTAGACAGACGCAAA 61.289 55.000 7.64 0.00 44.78 3.68
257 258 1.736645 GGCGCTTAGACAGACGCAA 60.737 57.895 7.64 0.00 44.78 4.85
258 259 2.126071 GGCGCTTAGACAGACGCA 60.126 61.111 7.64 0.00 44.78 5.24
259 260 1.519455 ATGGCGCTTAGACAGACGC 60.519 57.895 7.64 0.00 44.06 5.19
260 261 1.756375 GCATGGCGCTTAGACAGACG 61.756 60.000 7.64 0.00 44.06 4.18
261 262 0.740868 TGCATGGCGCTTAGACAGAC 60.741 55.000 7.64 0.00 44.06 3.51
262 263 0.036483 TTGCATGGCGCTTAGACAGA 60.036 50.000 7.64 0.00 44.06 3.41
263 264 1.019673 ATTGCATGGCGCTTAGACAG 58.980 50.000 7.64 0.00 44.06 3.51
264 265 0.734309 CATTGCATGGCGCTTAGACA 59.266 50.000 7.64 0.00 45.56 3.41
265 266 0.029834 CCATTGCATGGCGCTTAGAC 59.970 55.000 7.64 0.00 44.70 2.59
266 267 2.407268 CCATTGCATGGCGCTTAGA 58.593 52.632 7.64 0.00 44.70 2.10
286 287 6.689554 TCACTATGATCAGATTGAGAGCATC 58.310 40.000 6.31 0.00 40.86 3.91
287 288 6.494146 TCTCACTATGATCAGATTGAGAGCAT 59.506 38.462 27.16 0.02 43.70 3.79
288 289 5.832060 TCTCACTATGATCAGATTGAGAGCA 59.168 40.000 27.16 12.68 35.65 4.26
289 290 6.330004 TCTCACTATGATCAGATTGAGAGC 57.670 41.667 27.16 0.00 35.65 4.09
291 292 8.845227 GTTACTCTCACTATGATCAGATTGAGA 58.155 37.037 28.23 28.23 37.69 3.27
292 293 8.849168 AGTTACTCTCACTATGATCAGATTGAG 58.151 37.037 24.27 24.27 33.26 3.02
293 294 8.759481 AGTTACTCTCACTATGATCAGATTGA 57.241 34.615 9.67 9.67 0.00 2.57
296 297 8.792633 GCTAAGTTACTCTCACTATGATCAGAT 58.207 37.037 0.09 0.00 0.00 2.90
297 298 7.996066 AGCTAAGTTACTCTCACTATGATCAGA 59.004 37.037 0.09 0.00 0.00 3.27
298 299 8.165239 AGCTAAGTTACTCTCACTATGATCAG 57.835 38.462 0.09 0.00 0.00 2.90
299 300 9.278978 CTAGCTAAGTTACTCTCACTATGATCA 57.721 37.037 0.00 0.00 0.00 2.92
300 301 9.280174 ACTAGCTAAGTTACTCTCACTATGATC 57.720 37.037 0.00 0.00 33.35 2.92
330 331 9.762933 ATTTGTCACATAAAGCAAATGTACTTT 57.237 25.926 0.00 0.00 39.26 2.66
333 334 9.840427 ACTATTTGTCACATAAAGCAAATGTAC 57.160 29.630 10.45 0.00 40.42 2.90
357 358 9.480053 CCACAAACATCTTTTTCATCATTAACT 57.520 29.630 0.00 0.00 0.00 2.24
358 359 9.474920 TCCACAAACATCTTTTTCATCATTAAC 57.525 29.630 0.00 0.00 0.00 2.01
361 362 8.829612 GTTTCCACAAACATCTTTTTCATCATT 58.170 29.630 0.00 0.00 41.53 2.57
362 363 7.986320 TGTTTCCACAAACATCTTTTTCATCAT 59.014 29.630 0.00 0.00 45.73 2.45
363 364 7.326454 TGTTTCCACAAACATCTTTTTCATCA 58.674 30.769 0.00 0.00 45.73 3.07
364 365 7.769272 TGTTTCCACAAACATCTTTTTCATC 57.231 32.000 0.00 0.00 45.73 2.92
412 413 9.199184 GCGCATATCGTCATATTTATTAGTTTG 57.801 33.333 0.30 0.00 41.07 2.93
413 414 9.151471 AGCGCATATCGTCATATTTATTAGTTT 57.849 29.630 11.47 0.00 41.07 2.66
414 415 8.703604 AGCGCATATCGTCATATTTATTAGTT 57.296 30.769 11.47 0.00 41.07 2.24
415 416 9.234384 GTAGCGCATATCGTCATATTTATTAGT 57.766 33.333 11.47 0.00 41.07 2.24
416 417 8.410436 CGTAGCGCATATCGTCATATTTATTAG 58.590 37.037 11.47 0.00 41.07 1.73
417 418 7.911727 ACGTAGCGCATATCGTCATATTTATTA 59.088 33.333 11.47 0.00 41.07 0.98
418 419 6.750501 ACGTAGCGCATATCGTCATATTTATT 59.249 34.615 11.47 0.00 41.07 1.40
419 420 6.263344 ACGTAGCGCATATCGTCATATTTAT 58.737 36.000 11.47 0.00 41.07 1.40
420 421 5.633927 ACGTAGCGCATATCGTCATATTTA 58.366 37.500 11.47 0.00 41.07 1.40
421 422 4.482386 ACGTAGCGCATATCGTCATATTT 58.518 39.130 11.47 0.00 41.07 1.40
422 423 4.092771 ACGTAGCGCATATCGTCATATT 57.907 40.909 11.47 0.00 41.07 1.28
423 424 3.759527 ACGTAGCGCATATCGTCATAT 57.240 42.857 11.47 0.00 41.07 1.78
424 425 3.063045 CCTACGTAGCGCATATCGTCATA 59.937 47.826 17.41 0.00 41.07 2.15
425 426 2.159558 CCTACGTAGCGCATATCGTCAT 60.160 50.000 17.41 0.00 41.07 3.06
426 427 1.196127 CCTACGTAGCGCATATCGTCA 59.804 52.381 17.41 3.58 41.07 4.35
427 428 1.196354 ACCTACGTAGCGCATATCGTC 59.804 52.381 17.41 0.00 41.07 4.20
428 429 1.233019 ACCTACGTAGCGCATATCGT 58.767 50.000 17.41 16.35 41.07 3.73
429 430 3.460362 TTACCTACGTAGCGCATATCG 57.540 47.619 17.41 11.01 42.12 2.92
430 431 7.982371 AATTATTACCTACGTAGCGCATATC 57.018 36.000 17.41 0.00 0.00 1.63
431 432 9.512435 CTAAATTATTACCTACGTAGCGCATAT 57.488 33.333 17.41 7.84 0.00 1.78
432 433 8.729756 TCTAAATTATTACCTACGTAGCGCATA 58.270 33.333 17.41 8.98 0.00 3.14
433 434 7.596494 TCTAAATTATTACCTACGTAGCGCAT 58.404 34.615 17.41 9.90 0.00 4.73
434 435 6.969366 TCTAAATTATTACCTACGTAGCGCA 58.031 36.000 17.41 2.79 0.00 6.09
435 436 8.458212 AATCTAAATTATTACCTACGTAGCGC 57.542 34.615 17.41 0.00 0.00 5.92
460 461 9.419297 GCGGACTTATGATAAAATATGACACTA 57.581 33.333 0.00 0.00 0.00 2.74
461 462 7.931407 TGCGGACTTATGATAAAATATGACACT 59.069 33.333 0.00 0.00 0.00 3.55
462 463 8.083462 TGCGGACTTATGATAAAATATGACAC 57.917 34.615 0.00 0.00 0.00 3.67
463 464 8.556194 GTTGCGGACTTATGATAAAATATGACA 58.444 33.333 0.00 0.00 0.00 3.58
464 465 7.740346 CGTTGCGGACTTATGATAAAATATGAC 59.260 37.037 0.00 0.00 0.00 3.06
465 466 7.570507 GCGTTGCGGACTTATGATAAAATATGA 60.571 37.037 0.00 0.00 0.00 2.15
466 467 6.519761 GCGTTGCGGACTTATGATAAAATATG 59.480 38.462 0.00 0.00 0.00 1.78
467 468 6.203915 TGCGTTGCGGACTTATGATAAAATAT 59.796 34.615 0.00 0.00 0.00 1.28
468 469 5.524281 TGCGTTGCGGACTTATGATAAAATA 59.476 36.000 0.00 0.00 0.00 1.40
469 470 4.334203 TGCGTTGCGGACTTATGATAAAAT 59.666 37.500 0.00 0.00 0.00 1.82
470 471 3.685272 TGCGTTGCGGACTTATGATAAAA 59.315 39.130 0.00 0.00 0.00 1.52
471 472 3.062909 GTGCGTTGCGGACTTATGATAAA 59.937 43.478 5.96 0.00 44.36 1.40
472 473 2.605818 GTGCGTTGCGGACTTATGATAA 59.394 45.455 5.96 0.00 44.36 1.75
473 474 2.198406 GTGCGTTGCGGACTTATGATA 58.802 47.619 5.96 0.00 44.36 2.15
474 475 1.006832 GTGCGTTGCGGACTTATGAT 58.993 50.000 5.96 0.00 44.36 2.45
475 476 2.451693 GTGCGTTGCGGACTTATGA 58.548 52.632 5.96 0.00 44.36 2.15
481 482 2.954753 CCTCAAGTGCGTTGCGGAC 61.955 63.158 5.07 5.07 42.88 4.79
482 483 2.664851 CCTCAAGTGCGTTGCGGA 60.665 61.111 2.19 0.00 42.88 5.54
483 484 4.389576 GCCTCAAGTGCGTTGCGG 62.390 66.667 3.77 3.77 43.07 5.69
484 485 2.660553 TTTGCCTCAAGTGCGTTGCG 62.661 55.000 0.00 0.00 35.94 4.85
485 486 0.527385 TTTTGCCTCAAGTGCGTTGC 60.527 50.000 0.00 0.00 35.94 4.17
486 487 1.788308 CATTTTGCCTCAAGTGCGTTG 59.212 47.619 0.00 0.00 37.52 4.10
487 488 1.680735 TCATTTTGCCTCAAGTGCGTT 59.319 42.857 0.00 0.00 0.00 4.84
488 489 1.267806 CTCATTTTGCCTCAAGTGCGT 59.732 47.619 0.00 0.00 0.00 5.24
489 490 1.401931 CCTCATTTTGCCTCAAGTGCG 60.402 52.381 0.00 0.00 0.00 5.34
490 491 1.888512 TCCTCATTTTGCCTCAAGTGC 59.111 47.619 0.00 0.00 0.00 4.40
491 492 4.701651 TGTATCCTCATTTTGCCTCAAGTG 59.298 41.667 0.00 0.00 0.00 3.16
492 493 4.922206 TGTATCCTCATTTTGCCTCAAGT 58.078 39.130 0.00 0.00 0.00 3.16
493 494 5.678107 GCTTGTATCCTCATTTTGCCTCAAG 60.678 44.000 0.00 0.00 33.93 3.02
494 495 4.158394 GCTTGTATCCTCATTTTGCCTCAA 59.842 41.667 0.00 0.00 0.00 3.02
495 496 3.696051 GCTTGTATCCTCATTTTGCCTCA 59.304 43.478 0.00 0.00 0.00 3.86
496 497 3.950395 AGCTTGTATCCTCATTTTGCCTC 59.050 43.478 0.00 0.00 0.00 4.70
497 498 3.973425 AGCTTGTATCCTCATTTTGCCT 58.027 40.909 0.00 0.00 0.00 4.75
498 499 7.013274 TGTTATAGCTTGTATCCTCATTTTGCC 59.987 37.037 0.00 0.00 0.00 4.52
499 500 7.930217 TGTTATAGCTTGTATCCTCATTTTGC 58.070 34.615 0.00 0.00 0.00 3.68
502 503 9.289782 GGATTGTTATAGCTTGTATCCTCATTT 57.710 33.333 0.00 0.00 0.00 2.32
503 504 8.439971 TGGATTGTTATAGCTTGTATCCTCATT 58.560 33.333 0.00 0.00 33.04 2.57
504 505 7.977818 TGGATTGTTATAGCTTGTATCCTCAT 58.022 34.615 0.00 0.00 33.04 2.90
505 506 7.373617 TGGATTGTTATAGCTTGTATCCTCA 57.626 36.000 0.00 0.00 33.04 3.86
506 507 8.560374 GTTTGGATTGTTATAGCTTGTATCCTC 58.440 37.037 0.00 0.00 33.04 3.71
507 508 8.052748 TGTTTGGATTGTTATAGCTTGTATCCT 58.947 33.333 0.00 0.00 33.04 3.24
508 509 8.220755 TGTTTGGATTGTTATAGCTTGTATCC 57.779 34.615 0.00 0.00 0.00 2.59
544 545 8.509690 CGGACCGAGATAGTAGATAATTGTAAA 58.490 37.037 8.64 0.00 0.00 2.01
545 546 7.879677 TCGGACCGAGATAGTAGATAATTGTAA 59.120 37.037 13.88 0.00 0.00 2.41
546 547 7.389232 TCGGACCGAGATAGTAGATAATTGTA 58.611 38.462 13.88 0.00 0.00 2.41
547 548 6.236409 TCGGACCGAGATAGTAGATAATTGT 58.764 40.000 13.88 0.00 0.00 2.71
548 549 6.738832 TCGGACCGAGATAGTAGATAATTG 57.261 41.667 13.88 0.00 0.00 2.32
549 550 7.756395 TTTCGGACCGAGATAGTAGATAATT 57.244 36.000 17.51 0.00 37.14 1.40
550 551 7.756395 TTTTCGGACCGAGATAGTAGATAAT 57.244 36.000 17.51 0.00 37.14 1.28
551 552 7.756395 ATTTTCGGACCGAGATAGTAGATAA 57.244 36.000 17.51 1.28 37.14 1.75
552 553 8.853077 TTATTTTCGGACCGAGATAGTAGATA 57.147 34.615 17.51 3.60 37.14 1.98
553 554 7.447853 ACTTATTTTCGGACCGAGATAGTAGAT 59.552 37.037 17.51 4.58 37.14 1.98
554 555 6.769822 ACTTATTTTCGGACCGAGATAGTAGA 59.230 38.462 17.51 0.00 37.14 2.59
555 556 6.856938 CACTTATTTTCGGACCGAGATAGTAG 59.143 42.308 17.51 15.09 37.14 2.57
556 557 6.319658 ACACTTATTTTCGGACCGAGATAGTA 59.680 38.462 17.51 5.43 37.14 1.82
557 558 5.126707 ACACTTATTTTCGGACCGAGATAGT 59.873 40.000 17.51 12.85 37.14 2.12
558 559 5.589192 ACACTTATTTTCGGACCGAGATAG 58.411 41.667 17.51 12.26 37.14 2.08
559 560 5.587388 ACACTTATTTTCGGACCGAGATA 57.413 39.130 17.51 15.70 37.14 1.98
560 561 4.467198 ACACTTATTTTCGGACCGAGAT 57.533 40.909 17.51 16.67 37.14 2.75
561 562 3.947910 ACACTTATTTTCGGACCGAGA 57.052 42.857 17.51 10.26 37.14 4.04
562 563 6.470557 TTAAACACTTATTTTCGGACCGAG 57.529 37.500 17.51 6.85 37.14 4.63
563 564 7.388500 AGAATTAAACACTTATTTTCGGACCGA 59.612 33.333 13.88 13.88 0.00 4.69
564 565 7.524065 AGAATTAAACACTTATTTTCGGACCG 58.476 34.615 7.84 7.84 0.00 4.79
565 566 9.687210 AAAGAATTAAACACTTATTTTCGGACC 57.313 29.630 0.00 0.00 0.00 4.46
641 642 9.747293 GTCAAAGTGTACTAGAGTTAGAGTTTT 57.253 33.333 0.00 0.00 0.00 2.43
642 643 9.134055 AGTCAAAGTGTACTAGAGTTAGAGTTT 57.866 33.333 0.00 0.00 0.00 2.66
643 644 8.694581 AGTCAAAGTGTACTAGAGTTAGAGTT 57.305 34.615 0.00 0.00 0.00 3.01
644 645 9.962809 ATAGTCAAAGTGTACTAGAGTTAGAGT 57.037 33.333 0.00 0.00 32.01 3.24
673 674 9.401058 ACGTGGAGTAGTAGTACAATACTATTT 57.599 33.333 10.33 0.00 42.68 1.40
674 675 8.834465 CACGTGGAGTAGTAGTACAATACTATT 58.166 37.037 7.95 2.30 42.68 1.73
675 676 7.989741 ACACGTGGAGTAGTAGTACAATACTAT 59.010 37.037 21.57 0.00 42.68 2.12
676 677 7.331026 ACACGTGGAGTAGTAGTACAATACTA 58.669 38.462 21.57 0.00 40.14 1.82
677 678 6.176183 ACACGTGGAGTAGTAGTACAATACT 58.824 40.000 21.57 2.61 42.68 2.12
678 679 6.428385 ACACGTGGAGTAGTAGTACAATAC 57.572 41.667 21.57 4.77 0.00 1.89
679 680 5.586243 GGACACGTGGAGTAGTAGTACAATA 59.414 44.000 21.57 0.00 0.00 1.90
680 681 4.397417 GGACACGTGGAGTAGTAGTACAAT 59.603 45.833 21.57 0.00 0.00 2.71
681 682 3.753272 GGACACGTGGAGTAGTAGTACAA 59.247 47.826 21.57 0.00 0.00 2.41
682 683 3.008375 AGGACACGTGGAGTAGTAGTACA 59.992 47.826 21.57 0.00 0.00 2.90
683 684 3.373439 CAGGACACGTGGAGTAGTAGTAC 59.627 52.174 21.57 0.00 0.00 2.73
684 685 3.603532 CAGGACACGTGGAGTAGTAGTA 58.396 50.000 21.57 0.00 0.00 1.82
685 686 2.434428 CAGGACACGTGGAGTAGTAGT 58.566 52.381 21.57 0.00 0.00 2.73
686 687 1.132643 GCAGGACACGTGGAGTAGTAG 59.867 57.143 21.57 2.34 0.00 2.57
687 688 1.171308 GCAGGACACGTGGAGTAGTA 58.829 55.000 21.57 0.00 0.00 1.82
688 689 0.539901 AGCAGGACACGTGGAGTAGT 60.540 55.000 21.57 0.00 0.00 2.73
689 690 0.109086 CAGCAGGACACGTGGAGTAG 60.109 60.000 21.57 6.70 0.00 2.57
690 691 0.826256 ACAGCAGGACACGTGGAGTA 60.826 55.000 21.57 0.00 0.00 2.59
691 692 2.088674 GACAGCAGGACACGTGGAGT 62.089 60.000 21.57 6.96 0.00 3.85
692 693 1.373497 GACAGCAGGACACGTGGAG 60.373 63.158 21.57 7.44 0.00 3.86
693 694 2.734591 GACAGCAGGACACGTGGA 59.265 61.111 21.57 0.00 0.00 4.02
694 695 2.357517 GGACAGCAGGACACGTGG 60.358 66.667 21.57 2.48 0.00 4.94
695 696 1.956170 GTGGACAGCAGGACACGTG 60.956 63.158 15.48 15.48 0.00 4.49
696 697 2.421739 GTGGACAGCAGGACACGT 59.578 61.111 0.00 0.00 0.00 4.49
697 698 2.357517 GGTGGACAGCAGGACACG 60.358 66.667 0.00 0.00 34.78 4.49
698 699 0.613260 TATGGTGGACAGCAGGACAC 59.387 55.000 10.14 0.00 42.52 3.67
699 700 1.003118 GTTATGGTGGACAGCAGGACA 59.997 52.381 10.14 0.00 42.52 4.02
700 701 1.279271 AGTTATGGTGGACAGCAGGAC 59.721 52.381 10.14 10.21 42.52 3.85
701 702 1.656587 AGTTATGGTGGACAGCAGGA 58.343 50.000 10.14 0.00 42.52 3.86
702 703 2.738643 CGTAGTTATGGTGGACAGCAGG 60.739 54.545 10.14 0.00 42.52 4.85
703 704 2.094182 ACGTAGTTATGGTGGACAGCAG 60.094 50.000 10.14 0.00 37.78 4.24
704 705 1.897133 ACGTAGTTATGGTGGACAGCA 59.103 47.619 6.66 6.66 37.78 4.41
705 706 2.094390 TCACGTAGTTATGGTGGACAGC 60.094 50.000 0.00 0.00 41.61 4.40
706 707 3.861276 TCACGTAGTTATGGTGGACAG 57.139 47.619 0.00 0.00 41.61 3.51
707 708 4.281435 TCTTTCACGTAGTTATGGTGGACA 59.719 41.667 0.00 0.00 41.61 4.02
708 709 4.624452 GTCTTTCACGTAGTTATGGTGGAC 59.376 45.833 0.00 0.00 41.61 4.02
709 710 4.616604 CGTCTTTCACGTAGTTATGGTGGA 60.617 45.833 0.00 0.00 41.61 4.02
710 711 3.611113 CGTCTTTCACGTAGTTATGGTGG 59.389 47.826 0.00 0.00 41.61 4.61
711 712 4.817987 CGTCTTTCACGTAGTTATGGTG 57.182 45.455 0.00 0.00 41.61 4.17
723 724 0.316196 GTGCAGCACACGTCTTTCAC 60.316 55.000 21.22 0.00 40.07 3.18
724 725 2.013807 GTGCAGCACACGTCTTTCA 58.986 52.632 21.22 0.00 40.07 2.69
725 726 4.901627 GTGCAGCACACGTCTTTC 57.098 55.556 21.22 0.00 40.07 2.62
799 800 3.047877 CGGTTCTTGTCCACCCGC 61.048 66.667 0.00 0.00 0.00 6.13
832 833 0.532862 CCAACTTGTGAGCGTGGAGT 60.533 55.000 0.00 0.00 34.69 3.85
836 837 1.280746 CTGCCAACTTGTGAGCGTG 59.719 57.895 0.00 0.00 0.00 5.34
1051 1056 4.821589 CTTCACCTCCTCCGCCGC 62.822 72.222 0.00 0.00 0.00 6.53
1052 1057 3.382832 ACTTCACCTCCTCCGCCG 61.383 66.667 0.00 0.00 0.00 6.46
1053 1058 2.266055 CACTTCACCTCCTCCGCC 59.734 66.667 0.00 0.00 0.00 6.13
1054 1059 2.266055 CCACTTCACCTCCTCCGC 59.734 66.667 0.00 0.00 0.00 5.54
1055 1060 2.266055 GCCACTTCACCTCCTCCG 59.734 66.667 0.00 0.00 0.00 4.63
1080 1085 0.109272 TGCTTTGCGTCGAGGAGTAG 60.109 55.000 9.75 3.14 0.00 2.57
1093 1098 1.258982 GCCGACGATCAGTATGCTTTG 59.741 52.381 0.00 0.00 34.76 2.77
1186 1191 3.017442 TGAACAGACCATAGGAGTCGAG 58.983 50.000 0.00 0.00 39.31 4.04
1270 1275 3.371595 GCTAGCATTTAACAAGGGAGGGA 60.372 47.826 10.63 0.00 0.00 4.20
1290 1295 9.471702 TGTTACTTACTCCTACTATTTAGTGCT 57.528 33.333 0.45 0.00 37.10 4.40
1303 1308 8.522003 GCTTCTTTACTAGTGTTACTTACTCCT 58.478 37.037 5.39 0.00 0.00 3.69
1304 1309 7.484324 CGCTTCTTTACTAGTGTTACTTACTCC 59.516 40.741 5.39 0.00 0.00 3.85
1305 1310 7.008176 GCGCTTCTTTACTAGTGTTACTTACTC 59.992 40.741 5.39 0.00 0.00 2.59
1306 1311 6.805760 GCGCTTCTTTACTAGTGTTACTTACT 59.194 38.462 5.39 0.00 0.00 2.24
1307 1312 6.237149 CGCGCTTCTTTACTAGTGTTACTTAC 60.237 42.308 5.56 0.00 0.00 2.34
1308 1313 5.796935 CGCGCTTCTTTACTAGTGTTACTTA 59.203 40.000 5.56 0.00 0.00 2.24
1309 1314 4.620184 CGCGCTTCTTTACTAGTGTTACTT 59.380 41.667 5.56 0.00 0.00 2.24
1314 1319 1.542915 TCCGCGCTTCTTTACTAGTGT 59.457 47.619 5.56 0.00 0.00 3.55
1315 1320 2.273370 TCCGCGCTTCTTTACTAGTG 57.727 50.000 5.56 0.00 0.00 2.74
1318 1323 3.381045 CATCATCCGCGCTTCTTTACTA 58.619 45.455 5.56 0.00 0.00 1.82
1367 1373 4.290942 ACCTAAATCTCGAGTTCCCATCT 58.709 43.478 13.13 0.00 0.00 2.90
1377 1383 6.319658 ACCGTTCTTGTATACCTAAATCTCGA 59.680 38.462 0.00 0.00 0.00 4.04
1434 1445 2.972713 TGAGGTAGGCTGATGGTATTCC 59.027 50.000 0.00 0.00 0.00 3.01
1441 1452 4.798924 GCACTTCTATGAGGTAGGCTGATG 60.799 50.000 0.00 0.00 0.00 3.07
1442 1453 3.323403 GCACTTCTATGAGGTAGGCTGAT 59.677 47.826 0.00 0.00 0.00 2.90
1450 1461 1.972588 AAGGGGCACTTCTATGAGGT 58.027 50.000 0.00 0.00 32.85 3.85
1458 1469 3.227614 TGAAGGTAAAAAGGGGCACTTC 58.772 45.455 0.60 0.00 38.85 3.01
1483 1494 5.635120 AGAAGCTGACATAAAAAGGGTTCT 58.365 37.500 0.00 0.00 36.92 3.01
1487 1498 7.454260 ACTAAAGAAGCTGACATAAAAAGGG 57.546 36.000 0.00 0.00 0.00 3.95
1508 1519 6.588204 TCCTGAAAGACAGCAACTTTTACTA 58.412 36.000 0.00 0.00 44.52 1.82
1548 1559 4.217118 AGCTAACTGCAGACAAAGAAATGG 59.783 41.667 23.35 0.00 45.94 3.16
1607 1619 9.829507 ACAACAATGATCACAAAATCCTAAAAA 57.170 25.926 0.00 0.00 0.00 1.94
1665 1677 1.207089 TCTGGCCAAGAGGATTACACG 59.793 52.381 7.01 0.00 36.89 4.49
1688 1700 0.798771 GCTGTACTTCCGCGTCAGAG 60.799 60.000 4.92 0.00 0.00 3.35
1696 1708 1.728971 CTCTGCTTTGCTGTACTTCCG 59.271 52.381 0.00 0.00 0.00 4.30
1704 1716 6.630444 AATATATTGGACTCTGCTTTGCTG 57.370 37.500 0.00 0.00 0.00 4.41
1794 1806 0.453793 AGCGTCTCATCTTCAGGTCG 59.546 55.000 0.00 0.00 0.00 4.79
1830 1842 4.671831 TGAACCCAGCATGAGGAAAATTA 58.328 39.130 0.00 0.00 39.69 1.40
1868 1880 4.577693 GCACATACTTGATCACATCCATGT 59.422 41.667 0.00 0.00 42.84 3.21
1921 1933 6.985188 ATACACATGACAAGCGAGTTATTT 57.015 33.333 0.00 0.00 0.00 1.40
1927 1939 3.002791 ACCAATACACATGACAAGCGAG 58.997 45.455 0.00 0.00 0.00 5.03
1969 1981 8.719596 TCTACTAACTCTGAGATAAGGAGACAT 58.280 37.037 12.44 0.00 0.00 3.06
1971 1983 8.208903 ACTCTACTAACTCTGAGATAAGGAGAC 58.791 40.741 12.44 0.00 0.00 3.36
1993 2008 4.901849 TGCTATGTGCCTTAGGAATACTCT 59.098 41.667 0.69 0.00 42.00 3.24
2003 2018 8.746052 AAACTATTAACATGCTATGTGCCTTA 57.254 30.769 0.00 0.00 44.07 2.69
2014 2029 8.184192 AGTGATACAGCAAAACTATTAACATGC 58.816 33.333 0.00 0.00 0.00 4.06
2015 2030 9.494479 CAGTGATACAGCAAAACTATTAACATG 57.506 33.333 0.00 0.00 0.00 3.21
2016 2031 9.231297 ACAGTGATACAGCAAAACTATTAACAT 57.769 29.630 0.00 0.00 0.00 2.71
2017 2032 8.615878 ACAGTGATACAGCAAAACTATTAACA 57.384 30.769 0.00 0.00 0.00 2.41
2018 2033 8.936864 AGACAGTGATACAGCAAAACTATTAAC 58.063 33.333 0.00 0.00 0.00 2.01
2019 2034 9.502091 AAGACAGTGATACAGCAAAACTATTAA 57.498 29.630 0.00 0.00 0.00 1.40
2022 2037 7.390027 AGAAGACAGTGATACAGCAAAACTAT 58.610 34.615 0.00 0.00 0.00 2.12
2091 2111 8.270744 GTCTTATATTATAGGACCGAGGGAGTA 58.729 40.741 12.64 0.00 0.00 2.59
2092 2112 7.118060 GTCTTATATTATAGGACCGAGGGAGT 58.882 42.308 12.64 0.00 0.00 3.85
2093 2113 6.260493 CGTCTTATATTATAGGACCGAGGGAG 59.740 46.154 16.16 2.19 0.00 4.30
2094 2114 6.118170 CGTCTTATATTATAGGACCGAGGGA 58.882 44.000 16.16 0.00 0.00 4.20
2095 2115 5.221009 GCGTCTTATATTATAGGACCGAGGG 60.221 48.000 16.16 6.81 0.00 4.30
2096 2116 5.589452 AGCGTCTTATATTATAGGACCGAGG 59.411 44.000 16.16 7.08 0.00 4.63
2097 2117 6.680874 AGCGTCTTATATTATAGGACCGAG 57.319 41.667 16.16 7.34 0.00 4.63
2098 2118 7.458409 AAAGCGTCTTATATTATAGGACCGA 57.542 36.000 16.16 0.00 0.00 4.69
2099 2119 8.433126 CAAAAAGCGTCTTATATTATAGGACCG 58.567 37.037 16.16 13.08 0.00 4.79
2100 2120 9.485206 TCAAAAAGCGTCTTATATTATAGGACC 57.515 33.333 16.16 10.98 0.00 4.46
2107 2127 9.642327 TGTAGTGTCAAAAAGCGTCTTATATTA 57.358 29.630 0.00 0.00 0.00 0.98
2108 2128 8.440833 GTGTAGTGTCAAAAAGCGTCTTATATT 58.559 33.333 0.00 0.00 0.00 1.28
2109 2129 7.817962 AGTGTAGTGTCAAAAAGCGTCTTATAT 59.182 33.333 0.00 0.00 0.00 0.86
2110 2130 7.149973 AGTGTAGTGTCAAAAAGCGTCTTATA 58.850 34.615 0.00 0.00 0.00 0.98
2111 2131 5.989777 AGTGTAGTGTCAAAAAGCGTCTTAT 59.010 36.000 0.00 0.00 0.00 1.73
2112 2132 5.353938 AGTGTAGTGTCAAAAAGCGTCTTA 58.646 37.500 0.00 0.00 0.00 2.10
2113 2133 4.189231 AGTGTAGTGTCAAAAAGCGTCTT 58.811 39.130 0.00 0.00 0.00 3.01
2114 2134 3.793559 AGTGTAGTGTCAAAAAGCGTCT 58.206 40.909 0.00 0.00 0.00 4.18
2115 2135 4.743644 ACTAGTGTAGTGTCAAAAAGCGTC 59.256 41.667 0.00 0.00 37.69 5.19
2116 2136 4.690122 ACTAGTGTAGTGTCAAAAAGCGT 58.310 39.130 0.00 0.00 37.69 5.07
2143 2163 8.786826 TCCGTCTCATAATGTAAGACATTTTT 57.213 30.769 9.92 0.00 45.80 1.94
2144 2164 8.041323 ACTCCGTCTCATAATGTAAGACATTTT 58.959 33.333 9.92 0.33 45.80 1.82
2145 2165 7.556844 ACTCCGTCTCATAATGTAAGACATTT 58.443 34.615 9.92 0.00 45.80 2.32
2147 2167 6.716934 ACTCCGTCTCATAATGTAAGACAT 57.283 37.500 0.00 0.00 41.31 3.06
2148 2168 6.827251 ACTACTCCGTCTCATAATGTAAGACA 59.173 38.462 0.00 0.00 39.49 3.41
2149 2169 7.261829 ACTACTCCGTCTCATAATGTAAGAC 57.738 40.000 0.00 0.00 36.82 3.01
2150 2170 8.209584 ACTACTACTCCGTCTCATAATGTAAGA 58.790 37.037 0.00 0.00 0.00 2.10
2151 2171 8.380743 ACTACTACTCCGTCTCATAATGTAAG 57.619 38.462 0.00 0.00 0.00 2.34
2154 2174 8.921353 AATACTACTACTCCGTCTCATAATGT 57.079 34.615 0.00 0.00 0.00 2.71
2158 2178 9.445878 CCATAAATACTACTACTCCGTCTCATA 57.554 37.037 0.00 0.00 0.00 2.15
2159 2179 7.393796 CCCATAAATACTACTACTCCGTCTCAT 59.606 40.741 0.00 0.00 0.00 2.90
2160 2180 6.713903 CCCATAAATACTACTACTCCGTCTCA 59.286 42.308 0.00 0.00 0.00 3.27
2161 2181 6.939163 TCCCATAAATACTACTACTCCGTCTC 59.061 42.308 0.00 0.00 0.00 3.36
2162 2182 6.845908 TCCCATAAATACTACTACTCCGTCT 58.154 40.000 0.00 0.00 0.00 4.18
2163 2183 6.939163 TCTCCCATAAATACTACTACTCCGTC 59.061 42.308 0.00 0.00 0.00 4.79
2164 2184 6.845908 TCTCCCATAAATACTACTACTCCGT 58.154 40.000 0.00 0.00 0.00 4.69
2165 2185 7.447853 ACTTCTCCCATAAATACTACTACTCCG 59.552 40.741 0.00 0.00 0.00 4.63
2166 2186 8.709272 ACTTCTCCCATAAATACTACTACTCC 57.291 38.462 0.00 0.00 0.00 3.85
2167 2187 9.968870 CAACTTCTCCCATAAATACTACTACTC 57.031 37.037 0.00 0.00 0.00 2.59
2168 2188 9.490083 ACAACTTCTCCCATAAATACTACTACT 57.510 33.333 0.00 0.00 0.00 2.57
2171 2191 9.668497 GAAACAACTTCTCCCATAAATACTACT 57.332 33.333 0.00 0.00 0.00 2.57
2172 2192 8.890718 GGAAACAACTTCTCCCATAAATACTAC 58.109 37.037 0.00 0.00 34.17 2.73
2207 2227 5.183904 GGACAACTGTGGCTAGAATCAAAAT 59.816 40.000 0.00 0.00 31.06 1.82
2257 2277 6.202762 TGCAATTATGGAAGTATGTGACGATC 59.797 38.462 0.00 0.00 0.00 3.69
2269 2289 5.460646 ACAGTTCGTTTGCAATTATGGAAG 58.539 37.500 0.00 0.00 38.19 3.46
2278 2298 1.871039 GCTCCTACAGTTCGTTTGCAA 59.129 47.619 0.00 0.00 0.00 4.08
2298 2318 9.409312 TGCAAATATACAGAATTGAACAAACTG 57.591 29.630 16.60 16.60 36.03 3.16
2307 2327 8.627208 AGGGTAGATGCAAATATACAGAATTG 57.373 34.615 0.00 0.00 0.00 2.32
2317 2338 5.588648 GCTACACAAAGGGTAGATGCAAATA 59.411 40.000 10.44 0.00 40.49 1.40
2332 2353 5.865085 AGTTACCATGAAGAGCTACACAAA 58.135 37.500 0.00 0.00 0.00 2.83
2335 2356 6.603095 CAAAAGTTACCATGAAGAGCTACAC 58.397 40.000 0.00 0.00 0.00 2.90
2450 2479 8.883731 ACCAATTCATCTTCTTTCATAAGTACG 58.116 33.333 0.00 0.00 32.98 3.67
2455 2484 9.912634 GTCAAACCAATTCATCTTCTTTCATAA 57.087 29.630 0.00 0.00 0.00 1.90
2499 2528 8.401516 ACTACTTTAGTGGCACTGTCAGACAG 62.402 46.154 29.65 26.42 43.82 3.51
2500 2529 2.434336 ACTTTAGTGGCACTGTCAGACA 59.566 45.455 29.65 5.05 0.00 3.41
2501 2530 3.113260 ACTTTAGTGGCACTGTCAGAC 57.887 47.619 29.65 0.00 0.00 3.51
2515 2544 8.779354 AAGAAACCATCAGCTAACTACTTTAG 57.221 34.615 0.00 0.00 40.40 1.85
2531 2560 9.719355 GGTTGACCAAATAAAATAAGAAACCAT 57.281 29.630 0.00 0.00 33.88 3.55
2556 2585 9.150348 GTACATTTTGAATGAAAGGTTATTGGG 57.850 33.333 7.59 0.00 35.45 4.12
2584 2613 6.128090 GCCCTAACACAACAGACCTTTATAAC 60.128 42.308 0.00 0.00 0.00 1.89
2650 2679 0.446222 TGCGCGCTAAAGGTTCAATC 59.554 50.000 33.29 0.00 0.00 2.67
2787 2816 7.147230 ACCTTAATAAGAGAAGATCCCAATGCT 60.147 37.037 0.83 0.00 0.00 3.79
2831 2860 3.277416 ACCCAGGGTAATCCTCTATCC 57.723 52.381 10.48 0.00 46.12 2.59
2832 2861 4.748701 TGTACCCAGGGTAATCCTCTATC 58.251 47.826 21.00 5.08 46.12 2.08
2916 2945 8.601845 TCGAGTCTCTGATACAAAATTTGAAA 57.398 30.769 13.19 0.45 0.00 2.69
2936 2965 4.212214 GCACATTCTTCAGTTTCTTCGAGT 59.788 41.667 0.00 0.00 0.00 4.18
2954 2983 4.022935 ACGAAATCATGTTTCTGTGCACAT 60.023 37.500 22.00 0.22 33.72 3.21
2957 2986 3.563390 TGACGAAATCATGTTTCTGTGCA 59.437 39.130 14.59 0.00 29.99 4.57
3049 3078 1.587547 CTTTGAGCTAATCCGAGGCC 58.412 55.000 0.00 0.00 0.00 5.19
3064 3093 2.507339 AAACACGGTTCATGCCTTTG 57.493 45.000 0.00 0.00 0.00 2.77
3087 3116 2.046411 ATGCCACCGATGCGAACA 60.046 55.556 0.00 0.00 0.00 3.18
3091 3120 3.879682 CACCATGCCACCGATGCG 61.880 66.667 0.00 0.00 0.00 4.73
3098 3127 2.048603 GGAGAAGCCACCATGCCAC 61.049 63.158 0.00 0.00 36.34 5.01
3136 3165 0.171903 CTGCACAATGGGTTGCTAGC 59.828 55.000 8.10 8.10 38.96 3.42
3141 3170 1.434555 CAATGCTGCACAATGGGTTG 58.565 50.000 3.57 0.00 41.20 3.77
3142 3171 3.919163 CAATGCTGCACAATGGGTT 57.081 47.368 3.57 0.00 0.00 4.11
3171 3200 2.590007 ATCGGCAGAGCATTCGGC 60.590 61.111 0.00 0.00 42.82 5.54
3173 3202 0.531532 AAGGATCGGCAGAGCATTCG 60.532 55.000 4.14 0.00 30.47 3.34
3269 3298 0.320421 GGCAAAGTGTGAGTAGCCGA 60.320 55.000 0.00 0.00 31.88 5.54
3285 3314 2.070039 CCCGAGGTATTCCCAGGCA 61.070 63.158 0.00 0.00 34.66 4.75
3300 3329 0.757188 ACTCCCTGAGCATACTCCCG 60.757 60.000 0.00 0.00 42.74 5.14
3301 3330 2.383442 TACTCCCTGAGCATACTCCC 57.617 55.000 0.00 0.00 42.74 4.30
3307 3336 1.069823 CGCTTCATACTCCCTGAGCAT 59.930 52.381 0.00 0.00 32.04 3.79
3350 3379 6.017400 AGTAATTCACATTGGTTGCTCTTG 57.983 37.500 0.00 0.00 0.00 3.02
3361 3390 5.413833 CCAGCAAGACAGAGTAATTCACATT 59.586 40.000 0.00 0.00 0.00 2.71
3391 3420 0.383231 GCAATGGATTCCCTGAAGCG 59.617 55.000 0.00 0.00 0.00 4.68
3400 3429 2.648724 CGCGCACGCAATGGATTC 60.649 61.111 16.04 0.00 42.06 2.52
3440 3469 4.326766 CCTGCAACACAACCGCCG 62.327 66.667 0.00 0.00 0.00 6.46
3441 3470 3.977244 CCCTGCAACACAACCGCC 61.977 66.667 0.00 0.00 0.00 6.13
3456 3485 1.801765 GCGATCCTTCAACGTCTACCC 60.802 57.143 0.00 0.00 0.00 3.69
3477 3506 3.332034 ACACAAACACTTATACCTCCGC 58.668 45.455 0.00 0.00 0.00 5.54
3478 3507 4.753107 ACAACACAAACACTTATACCTCCG 59.247 41.667 0.00 0.00 0.00 4.63
3519 3548 1.276138 AGATGACACGGCACATCTTGA 59.724 47.619 12.35 0.00 32.44 3.02
3529 3558 5.233957 TGCAAAAATATGAGATGACACGG 57.766 39.130 0.00 0.00 0.00 4.94
3530 3559 8.071967 ACATATGCAAAAATATGAGATGACACG 58.928 33.333 11.15 0.00 41.25 4.49
3545 3574 6.040278 TGGACACAAAGAGAACATATGCAAAA 59.960 34.615 1.58 0.00 0.00 2.44
3546 3575 5.534278 TGGACACAAAGAGAACATATGCAAA 59.466 36.000 1.58 0.00 0.00 3.68
3598 3627 4.079253 GGTAGAGAAAACAGCATTCCCAA 58.921 43.478 0.00 0.00 0.00 4.12
3614 3643 4.521130 TCTTTACACTGCACAGGTAGAG 57.479 45.455 2.21 6.56 0.00 2.43
3625 3654 4.935808 GTCCAGGGTTACATCTTTACACTG 59.064 45.833 0.00 0.00 41.78 3.66
3628 3657 5.308497 TCTTGTCCAGGGTTACATCTTTACA 59.692 40.000 0.00 0.00 0.00 2.41
3629 3658 5.801380 TCTTGTCCAGGGTTACATCTTTAC 58.199 41.667 0.00 0.00 0.00 2.01
3636 3665 2.897969 GAGACTCTTGTCCAGGGTTACA 59.102 50.000 0.00 0.00 43.91 2.41
3641 3670 1.638529 AGTGAGACTCTTGTCCAGGG 58.361 55.000 3.68 0.00 43.91 4.45
3720 3749 0.248743 TCGGTTACATCTTAGGCGCG 60.249 55.000 0.00 0.00 0.00 6.86
3757 3811 4.732784 TCGAACCAAATATTTCTGCAAGC 58.267 39.130 0.00 0.00 0.00 4.01
3782 3836 4.811024 TCGATCCAAAAAGAGATTGATCCG 59.189 41.667 0.00 0.00 29.65 4.18
3800 3854 5.468409 GGAAGAAATCCCTTGATCTTCGATC 59.532 44.000 7.93 0.00 43.00 3.69
3870 3925 9.621629 TTGACCCGAAACTCAACAAATATATAT 57.378 29.630 0.00 0.00 0.00 0.86
3890 3945 3.616317 GCCAAATACAACATGGTTGACCC 60.616 47.826 15.35 0.00 36.57 4.46
3891 3946 3.584834 GCCAAATACAACATGGTTGACC 58.415 45.455 15.35 0.00 36.57 4.02
3910 3965 2.501723 TGAACAAGATCAGAGTAGGGCC 59.498 50.000 0.00 0.00 0.00 5.80
3911 3966 3.895232 TGAACAAGATCAGAGTAGGGC 57.105 47.619 0.00 0.00 0.00 5.19
3912 3967 7.232330 TCTGATATGAACAAGATCAGAGTAGGG 59.768 40.741 19.48 4.25 46.68 3.53
3913 3968 8.175925 TCTGATATGAACAAGATCAGAGTAGG 57.824 38.462 19.48 4.72 46.68 3.18
3919 3974 6.977502 AGTCGTTCTGATATGAACAAGATCAG 59.022 38.462 16.86 16.86 44.59 2.90
3920 3975 6.867550 AGTCGTTCTGATATGAACAAGATCA 58.132 36.000 7.91 0.00 44.59 2.92
3923 3978 9.952188 CTTATAGTCGTTCTGATATGAACAAGA 57.048 33.333 7.91 0.00 44.59 3.02
3957 4012 3.636231 CCTGGGGAGGCGTCACAA 61.636 66.667 11.36 0.00 0.00 3.33
3962 4017 3.857521 TTACACCCTGGGGAGGCGT 62.858 63.158 18.88 8.31 38.96 5.68
3963 4018 2.132089 TTTTACACCCTGGGGAGGCG 62.132 60.000 18.88 2.29 38.96 5.52
3964 4019 0.611062 GTTTTACACCCTGGGGAGGC 60.611 60.000 18.88 0.00 38.96 4.70
3965 4020 0.039180 GGTTTTACACCCTGGGGAGG 59.961 60.000 18.88 8.72 40.19 4.30
3992 4059 1.303643 GCTTGGTAGGGCTGCAAGT 60.304 57.895 0.50 0.00 35.30 3.16
3994 4061 2.035626 GGCTTGGTAGGGCTGCAA 59.964 61.111 0.50 0.00 0.00 4.08
3995 4062 3.256178 TGGCTTGGTAGGGCTGCA 61.256 61.111 0.50 0.00 0.00 4.41
4000 4067 2.044946 GGCAGTGGCTTGGTAGGG 60.045 66.667 9.90 0.00 40.87 3.53
4021 4088 4.704833 GGCGGTGGCAGCAGAAGA 62.705 66.667 17.80 0.00 42.47 2.87
4161 4228 4.552365 CCGCCGCATGACCAGGAT 62.552 66.667 0.00 0.00 0.00 3.24
4178 4245 4.864334 CATGGGGGTGAGCTCCGC 62.864 72.222 12.15 10.69 35.58 5.54
4234 4301 3.474570 AGATCCACGGCTGCCTCC 61.475 66.667 17.92 0.00 0.00 4.30
4240 4307 0.977627 TGTGATCCAGATCCACGGCT 60.978 55.000 5.22 0.00 37.02 5.52
4293 4360 2.124570 CCCCTCATCCGTTGCCAG 60.125 66.667 0.00 0.00 0.00 4.85
4294 4361 2.933287 ACCCCTCATCCGTTGCCA 60.933 61.111 0.00 0.00 0.00 4.92
4298 4365 2.707849 CGTCGACCCCTCATCCGTT 61.708 63.158 10.58 0.00 0.00 4.44
4299 4366 3.138798 CGTCGACCCCTCATCCGT 61.139 66.667 10.58 0.00 0.00 4.69
4341 4409 0.907704 TGAACCAGCACCTACCGGAT 60.908 55.000 9.46 0.00 0.00 4.18
4343 4411 0.250553 TTTGAACCAGCACCTACCGG 60.251 55.000 0.00 0.00 0.00 5.28
4344 4412 1.156736 CTTTGAACCAGCACCTACCG 58.843 55.000 0.00 0.00 0.00 4.02
4347 4415 2.171659 TGACACTTTGAACCAGCACCTA 59.828 45.455 0.00 0.00 0.00 3.08
4348 4416 1.064758 TGACACTTTGAACCAGCACCT 60.065 47.619 0.00 0.00 0.00 4.00
4350 4418 1.742831 TGTGACACTTTGAACCAGCAC 59.257 47.619 7.20 0.00 0.00 4.40
4352 4420 3.715628 ATTGTGACACTTTGAACCAGC 57.284 42.857 7.20 0.00 0.00 4.85
4355 4423 2.788786 CGCAATTGTGACACTTTGAACC 59.211 45.455 13.88 6.83 0.00 3.62
4361 4429 0.667993 CACCCGCAATTGTGACACTT 59.332 50.000 20.47 0.00 34.37 3.16
4365 4433 2.124122 GTTTTCACCCGCAATTGTGAC 58.876 47.619 20.47 4.88 40.96 3.67
4368 4436 0.031449 CGGTTTTCACCCGCAATTGT 59.969 50.000 7.40 0.00 40.52 2.71
4376 4444 3.120041 CAAATCAACACGGTTTTCACCC 58.880 45.455 0.00 0.00 40.52 4.61
4379 4447 3.444034 TGACCAAATCAACACGGTTTTCA 59.556 39.130 0.00 0.00 33.02 2.69
4386 4454 1.269174 TGCCATGACCAAATCAACACG 59.731 47.619 0.00 0.00 41.93 4.49
4387 4455 2.557924 TCTGCCATGACCAAATCAACAC 59.442 45.455 0.00 0.00 41.93 3.32
4393 4461 2.019249 CATCGTCTGCCATGACCAAAT 58.981 47.619 0.00 0.00 33.70 2.32
4395 4463 0.392863 CCATCGTCTGCCATGACCAA 60.393 55.000 0.00 0.00 33.70 3.67
4419 4488 0.319641 AAGAAGACGACGCCCAAGAC 60.320 55.000 0.00 0.00 0.00 3.01
4435 4504 4.271696 ACCGATGATGTCTTCAACAAGA 57.728 40.909 0.00 0.00 42.37 3.02
4439 4508 2.483877 TGCAACCGATGATGTCTTCAAC 59.516 45.455 0.00 0.00 38.03 3.18
4441 4510 2.470983 TGCAACCGATGATGTCTTCA 57.529 45.000 0.00 0.00 39.12 3.02
4442 4511 3.544834 CGATTGCAACCGATGATGTCTTC 60.545 47.826 7.67 0.00 0.00 2.87
4446 4515 1.665679 GACGATTGCAACCGATGATGT 59.334 47.619 22.59 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.