Multiple sequence alignment - TraesCS5B01G253800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G253800 chr5B 100.000 4689 0 0 1 4689 436285565 436280877 0.000000e+00 8660.0
1 TraesCS5B01G253800 chr5B 78.571 140 18 6 2855 2992 436282626 436282497 1.080000e-11 82.4
2 TraesCS5B01G253800 chr5D 92.495 4064 256 26 542 4576 368367779 368363736 0.000000e+00 5770.0
3 TraesCS5B01G253800 chr5D 84.270 445 60 9 20 457 476650822 476650381 4.340000e-115 425.0
4 TraesCS5B01G253800 chr5D 82.370 346 49 11 1931 2269 378029010 378029350 1.650000e-74 291.0
5 TraesCS5B01G253800 chr5D 94.215 121 6 1 4569 4689 71729822 71729941 2.880000e-42 183.0
6 TraesCS5B01G253800 chr5A 91.779 2591 164 28 474 3043 470244736 470242174 0.000000e+00 3559.0
7 TraesCS5B01G253800 chr5A 91.392 1545 118 6 3021 4553 470227030 470225489 0.000000e+00 2102.0
8 TraesCS5B01G253800 chr5A 91.392 1545 118 6 3021 4553 470242161 470240620 0.000000e+00 2102.0
9 TraesCS5B01G253800 chr5A 97.297 37 1 0 2934 2970 470227076 470227040 3.920000e-06 63.9
10 TraesCS5B01G253800 chr5A 97.297 37 1 0 2934 2970 470242207 470242171 3.920000e-06 63.9
11 TraesCS5B01G253800 chr1D 81.054 2201 343 57 1796 3965 627036 624879 0.000000e+00 1687.0
12 TraesCS5B01G253800 chr1D 81.971 1969 290 50 1809 3749 470447 472378 0.000000e+00 1609.0
13 TraesCS5B01G253800 chr1D 77.961 1089 196 37 657 1726 628528 627465 3.960000e-180 641.0
14 TraesCS5B01G253800 chr1D 78.410 931 146 44 644 1550 468970 469869 5.300000e-154 555.0
15 TraesCS5B01G253800 chr1D 82.058 379 57 11 3427 3799 725897 725524 3.520000e-81 313.0
16 TraesCS5B01G253800 chr1A 80.632 2184 349 63 1812 3965 3464418 3462279 0.000000e+00 1622.0
17 TraesCS5B01G253800 chr1A 78.633 2195 368 74 1815 3953 2849077 2851226 0.000000e+00 1362.0
18 TraesCS5B01G253800 chr1A 78.357 1497 247 56 1815 3287 2550491 2551934 0.000000e+00 898.0
19 TraesCS5B01G253800 chr1A 76.667 1020 182 50 737 1731 2549056 2550044 9.000000e-142 514.0
20 TraesCS5B01G253800 chr1A 96.460 113 4 0 4577 4689 310244021 310243909 2.230000e-43 187.0
21 TraesCS5B01G253800 chr1A 91.538 130 9 2 4561 4689 374212469 374212341 1.340000e-40 178.0
22 TraesCS5B01G253800 chr1B 79.392 2368 380 84 1812 4140 4813354 4811056 0.000000e+00 1570.0
23 TraesCS5B01G253800 chr1B 85.786 795 100 10 1812 2597 4522764 4521974 0.000000e+00 830.0
24 TraesCS5B01G253800 chr1B 78.603 916 148 38 657 1550 4524221 4523332 3.170000e-156 562.0
25 TraesCS5B01G253800 chr1B 77.990 836 130 38 648 1466 4204737 4205535 4.250000e-130 475.0
26 TraesCS5B01G253800 chr1B 79.041 730 119 21 2701 3424 4521803 4521102 1.980000e-128 470.0
27 TraesCS5B01G253800 chr1B 84.275 407 58 6 56 462 389229783 389230183 4.400000e-105 392.0
28 TraesCS5B01G253800 chr2A 87.143 560 67 5 3169 3725 766328001 766328558 8.560000e-177 630.0
29 TraesCS5B01G253800 chr2A 85.385 260 31 4 7 260 19461043 19461301 3.600000e-66 263.0
30 TraesCS5B01G253800 chr2A 92.208 77 6 0 7 83 507407510 507407586 4.960000e-20 110.0
31 TraesCS5B01G253800 chr2A 89.157 83 9 0 9 91 758487437 758487355 2.310000e-18 104.0
32 TraesCS5B01G253800 chr2A 90.123 81 5 3 7 85 78232511 78232590 8.300000e-18 102.0
33 TraesCS5B01G253800 chr2D 86.453 561 69 6 3169 3725 641067445 641068002 4.010000e-170 608.0
34 TraesCS5B01G253800 chr2B 85.512 566 72 7 3169 3730 800188023 800187464 2.430000e-162 582.0
35 TraesCS5B01G253800 chr2B 83.019 265 31 10 9 265 725825031 725824773 1.310000e-55 228.0
36 TraesCS5B01G253800 chr2B 92.913 127 6 2 4564 4689 433131807 433131683 1.040000e-41 182.0
37 TraesCS5B01G253800 chr3D 86.374 455 54 7 13 462 167854834 167855285 1.520000e-134 490.0
38 TraesCS5B01G253800 chr3D 84.430 456 51 14 9 457 543890379 543889937 9.320000e-117 431.0
39 TraesCS5B01G253800 chr6A 86.475 451 49 8 13 457 474436150 474436594 7.050000e-133 484.0
40 TraesCS5B01G253800 chr6A 95.763 118 5 0 4572 4689 330419355 330419238 1.720000e-44 191.0
41 TraesCS5B01G253800 chr6A 94.215 121 6 1 4569 4689 165256334 165256215 2.880000e-42 183.0
42 TraesCS5B01G253800 chr6A 82.036 167 19 9 2920 3085 297639034 297639190 1.060000e-26 132.0
43 TraesCS5B01G253800 chr4D 85.841 452 52 9 18 462 482440547 482440101 1.980000e-128 470.0
44 TraesCS5B01G253800 chr6D 86.256 422 45 12 47 462 109282578 109282992 3.330000e-121 446.0
45 TraesCS5B01G253800 chr7B 84.080 402 53 10 62 462 509855779 509855388 1.230000e-100 377.0
46 TraesCS5B01G253800 chr4B 84.156 385 51 7 18 401 32240359 32240734 9.590000e-97 364.0
47 TraesCS5B01G253800 chr3B 84.528 265 32 7 9 269 175680340 175680599 2.170000e-63 254.0
48 TraesCS5B01G253800 chr3B 96.522 115 4 0 4575 4689 504618045 504618159 1.720000e-44 191.0
49 TraesCS5B01G253800 chr3B 94.215 121 6 1 4569 4689 129511021 129510902 2.880000e-42 183.0
50 TraesCS5B01G253800 chr3B 94.215 121 6 1 4569 4689 502224183 502224302 2.880000e-42 183.0
51 TraesCS5B01G253800 chr3B 82.500 120 17 4 19 137 123451416 123451532 8.300000e-18 102.0
52 TraesCS5B01G253800 chr6B 82.036 167 19 9 2920 3085 343035220 343035064 1.060000e-26 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G253800 chr5B 436280877 436285565 4688 True 4371.200000 8660 89.285500 1 4689 2 chr5B.!!$R1 4688
1 TraesCS5B01G253800 chr5D 368363736 368367779 4043 True 5770.000000 5770 92.495000 542 4576 1 chr5D.!!$R1 4034
2 TraesCS5B01G253800 chr5A 470240620 470244736 4116 True 1908.300000 3559 93.489333 474 4553 3 chr5A.!!$R2 4079
3 TraesCS5B01G253800 chr5A 470225489 470227076 1587 True 1082.950000 2102 94.344500 2934 4553 2 chr5A.!!$R1 1619
4 TraesCS5B01G253800 chr1D 624879 628528 3649 True 1164.000000 1687 79.507500 657 3965 2 chr1D.!!$R2 3308
5 TraesCS5B01G253800 chr1D 468970 472378 3408 False 1082.000000 1609 80.190500 644 3749 2 chr1D.!!$F1 3105
6 TraesCS5B01G253800 chr1A 3462279 3464418 2139 True 1622.000000 1622 80.632000 1812 3965 1 chr1A.!!$R1 2153
7 TraesCS5B01G253800 chr1A 2849077 2851226 2149 False 1362.000000 1362 78.633000 1815 3953 1 chr1A.!!$F1 2138
8 TraesCS5B01G253800 chr1A 2549056 2551934 2878 False 706.000000 898 77.512000 737 3287 2 chr1A.!!$F2 2550
9 TraesCS5B01G253800 chr1B 4811056 4813354 2298 True 1570.000000 1570 79.392000 1812 4140 1 chr1B.!!$R1 2328
10 TraesCS5B01G253800 chr1B 4521102 4524221 3119 True 620.666667 830 81.143333 657 3424 3 chr1B.!!$R2 2767
11 TraesCS5B01G253800 chr1B 4204737 4205535 798 False 475.000000 475 77.990000 648 1466 1 chr1B.!!$F1 818
12 TraesCS5B01G253800 chr2A 766328001 766328558 557 False 630.000000 630 87.143000 3169 3725 1 chr2A.!!$F4 556
13 TraesCS5B01G253800 chr2D 641067445 641068002 557 False 608.000000 608 86.453000 3169 3725 1 chr2D.!!$F1 556
14 TraesCS5B01G253800 chr2B 800187464 800188023 559 True 582.000000 582 85.512000 3169 3730 1 chr2B.!!$R3 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
274 275 0.037326 TTGGAGACGTGTCAGCATCC 60.037 55.000 15.28 0.0 0.00 3.51 F
282 283 0.610232 GTGTCAGCATCCCCAAGCTT 60.610 55.000 0.00 0.0 39.50 3.74 F
283 284 0.991146 TGTCAGCATCCCCAAGCTTA 59.009 50.000 0.00 0.0 39.50 3.09 F
284 285 1.354031 TGTCAGCATCCCCAAGCTTAA 59.646 47.619 0.00 0.0 39.50 1.85 F
285 286 2.025037 TGTCAGCATCCCCAAGCTTAAT 60.025 45.455 0.00 0.0 39.50 1.40 F
307 308 2.041350 TCCTCCTCGTCTTCAAGTAGGT 59.959 50.000 3.98 0.0 0.00 3.08 F
1493 1510 2.592512 TCCATTCCCTCCCTCTCTTAGT 59.407 50.000 0.00 0.0 0.00 2.24 F
1864 2255 3.782656 AATGTCTGGTAGGAAAACCGT 57.217 42.857 0.00 0.0 42.91 4.83 F
2963 3469 0.098200 CATGACTTGCTGATGTGGCG 59.902 55.000 0.00 0.0 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1470 1487 1.324014 AGAGAGGGAGGGAATGGAGA 58.676 55.000 0.00 0.0 0.00 3.71 R
1471 1488 2.188818 AAGAGAGGGAGGGAATGGAG 57.811 55.000 0.00 0.0 0.00 3.86 R
1981 2374 2.421952 GCCATAGAATTGTCCTGGCTCA 60.422 50.000 17.23 0.0 44.32 4.26 R
2040 2433 5.105146 GCTCCAGATTCTTGAGAGGTTTCTA 60.105 44.000 16.76 0.0 32.53 2.10 R
2311 2709 9.629878 TCCAACTACTACAAAATACCAGAAAAA 57.370 29.630 0.00 0.0 0.00 1.94 R
2335 2736 5.662674 ATACTTAGTCCGATAATGCCTCC 57.337 43.478 0.00 0.0 0.00 4.30 R
2446 2851 2.116238 ACTTGCAGGTACATATCCCGT 58.884 47.619 0.00 0.0 0.00 5.28 R
3579 4148 1.940613 GCCTATCAACTAACTTGGCCG 59.059 52.381 0.00 0.0 33.45 6.13 R
3954 4540 0.035439 CCAAGTGTGTATTCGGGCCT 60.035 55.000 0.84 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.625800 GCAGTGTCCTCATGGGTC 57.374 61.111 0.00 0.00 36.25 4.46
18 19 1.986413 GCAGTGTCCTCATGGGTCT 59.014 57.895 0.00 0.00 36.25 3.85
19 20 0.326264 GCAGTGTCCTCATGGGTCTT 59.674 55.000 0.00 0.00 36.25 3.01
20 21 1.677217 GCAGTGTCCTCATGGGTCTTC 60.677 57.143 0.00 0.00 36.25 2.87
21 22 1.905215 CAGTGTCCTCATGGGTCTTCT 59.095 52.381 0.00 0.00 36.25 2.85
22 23 1.905215 AGTGTCCTCATGGGTCTTCTG 59.095 52.381 0.00 0.00 36.25 3.02
23 24 1.065854 GTGTCCTCATGGGTCTTCTGG 60.066 57.143 0.00 0.00 36.25 3.86
24 25 1.280457 GTCCTCATGGGTCTTCTGGT 58.720 55.000 0.00 0.00 36.25 4.00
25 26 1.208293 GTCCTCATGGGTCTTCTGGTC 59.792 57.143 0.00 0.00 36.25 4.02
26 27 0.543749 CCTCATGGGTCTTCTGGTCC 59.456 60.000 0.00 0.00 0.00 4.46
27 28 1.577736 CTCATGGGTCTTCTGGTCCT 58.422 55.000 0.00 0.00 0.00 3.85
28 29 1.912043 CTCATGGGTCTTCTGGTCCTT 59.088 52.381 0.00 0.00 0.00 3.36
29 30 1.909302 TCATGGGTCTTCTGGTCCTTC 59.091 52.381 0.00 0.00 0.00 3.46
30 31 1.065126 CATGGGTCTTCTGGTCCTTCC 60.065 57.143 0.00 0.00 0.00 3.46
31 32 0.193574 TGGGTCTTCTGGTCCTTCCT 59.806 55.000 0.00 0.00 37.07 3.36
32 33 0.906066 GGGTCTTCTGGTCCTTCCTC 59.094 60.000 0.00 0.00 37.07 3.71
33 34 0.533032 GGTCTTCTGGTCCTTCCTCG 59.467 60.000 0.00 0.00 37.07 4.63
34 35 1.546961 GTCTTCTGGTCCTTCCTCGA 58.453 55.000 0.00 0.00 37.07 4.04
35 36 1.893801 GTCTTCTGGTCCTTCCTCGAA 59.106 52.381 0.00 0.00 37.07 3.71
36 37 2.094442 GTCTTCTGGTCCTTCCTCGAAG 60.094 54.545 0.00 0.00 41.34 3.79
37 38 0.608640 TTCTGGTCCTTCCTCGAAGC 59.391 55.000 0.00 0.00 38.24 3.86
38 39 0.251832 TCTGGTCCTTCCTCGAAGCT 60.252 55.000 0.00 0.00 38.24 3.74
39 40 0.610687 CTGGTCCTTCCTCGAAGCTT 59.389 55.000 0.00 0.00 38.24 3.74
40 41 0.608640 TGGTCCTTCCTCGAAGCTTC 59.391 55.000 16.84 16.84 38.24 3.86
47 48 2.184579 CTCGAAGCTTCGGGGGTC 59.815 66.667 39.79 9.10 46.94 4.46
48 49 2.352032 CTCGAAGCTTCGGGGGTCT 61.352 63.158 39.79 0.00 46.94 3.85
49 50 2.184579 CGAAGCTTCGGGGGTCTC 59.815 66.667 35.58 3.50 46.30 3.36
50 51 2.352032 CGAAGCTTCGGGGGTCTCT 61.352 63.158 35.58 0.00 46.30 3.10
51 52 1.889530 CGAAGCTTCGGGGGTCTCTT 61.890 60.000 35.58 0.00 46.30 2.85
52 53 0.391793 GAAGCTTCGGGGGTCTCTTG 60.392 60.000 11.40 0.00 0.00 3.02
53 54 1.128188 AAGCTTCGGGGGTCTCTTGT 61.128 55.000 0.00 0.00 0.00 3.16
54 55 1.376037 GCTTCGGGGGTCTCTTGTG 60.376 63.158 0.00 0.00 0.00 3.33
55 56 2.058675 CTTCGGGGGTCTCTTGTGT 58.941 57.895 0.00 0.00 0.00 3.72
56 57 0.396811 CTTCGGGGGTCTCTTGTGTT 59.603 55.000 0.00 0.00 0.00 3.32
57 58 0.395312 TTCGGGGGTCTCTTGTGTTC 59.605 55.000 0.00 0.00 0.00 3.18
58 59 0.471211 TCGGGGGTCTCTTGTGTTCT 60.471 55.000 0.00 0.00 0.00 3.01
59 60 1.203087 TCGGGGGTCTCTTGTGTTCTA 60.203 52.381 0.00 0.00 0.00 2.10
60 61 1.831736 CGGGGGTCTCTTGTGTTCTAT 59.168 52.381 0.00 0.00 0.00 1.98
61 62 3.028850 CGGGGGTCTCTTGTGTTCTATA 58.971 50.000 0.00 0.00 0.00 1.31
62 63 3.449737 CGGGGGTCTCTTGTGTTCTATAA 59.550 47.826 0.00 0.00 0.00 0.98
63 64 4.081309 CGGGGGTCTCTTGTGTTCTATAAA 60.081 45.833 0.00 0.00 0.00 1.40
64 65 5.570034 CGGGGGTCTCTTGTGTTCTATAAAA 60.570 44.000 0.00 0.00 0.00 1.52
65 66 6.243148 GGGGGTCTCTTGTGTTCTATAAAAA 58.757 40.000 0.00 0.00 0.00 1.94
108 109 8.176814 TCGTATTTGAACTTCGTTTAGTATGG 57.823 34.615 0.00 0.00 0.00 2.74
109 110 7.814107 TCGTATTTGAACTTCGTTTAGTATGGT 59.186 33.333 0.00 0.00 0.00 3.55
110 111 8.437742 CGTATTTGAACTTCGTTTAGTATGGTT 58.562 33.333 0.00 0.00 0.00 3.67
114 115 9.505995 TTTGAACTTCGTTTAGTATGGTTTTTC 57.494 29.630 0.00 0.00 0.00 2.29
115 116 8.441312 TGAACTTCGTTTAGTATGGTTTTTCT 57.559 30.769 0.00 0.00 0.00 2.52
116 117 8.339714 TGAACTTCGTTTAGTATGGTTTTTCTG 58.660 33.333 0.00 0.00 0.00 3.02
117 118 6.665465 ACTTCGTTTAGTATGGTTTTTCTGC 58.335 36.000 0.00 0.00 0.00 4.26
118 119 5.272167 TCGTTTAGTATGGTTTTTCTGCG 57.728 39.130 0.00 0.00 0.00 5.18
119 120 4.989797 TCGTTTAGTATGGTTTTTCTGCGA 59.010 37.500 0.00 0.00 0.00 5.10
120 121 5.119588 TCGTTTAGTATGGTTTTTCTGCGAG 59.880 40.000 0.00 0.00 0.00 5.03
121 122 5.119588 CGTTTAGTATGGTTTTTCTGCGAGA 59.880 40.000 0.00 0.00 0.00 4.04
122 123 6.183360 CGTTTAGTATGGTTTTTCTGCGAGAT 60.183 38.462 0.00 0.00 0.00 2.75
123 124 7.009815 CGTTTAGTATGGTTTTTCTGCGAGATA 59.990 37.037 0.00 0.00 0.00 1.98
124 125 8.662141 GTTTAGTATGGTTTTTCTGCGAGATAA 58.338 33.333 0.00 0.00 0.00 1.75
125 126 8.780846 TTAGTATGGTTTTTCTGCGAGATAAA 57.219 30.769 0.00 0.00 0.00 1.40
126 127 7.308782 AGTATGGTTTTTCTGCGAGATAAAG 57.691 36.000 0.00 0.00 28.38 1.85
127 128 7.103641 AGTATGGTTTTTCTGCGAGATAAAGA 58.896 34.615 0.00 0.00 28.38 2.52
128 129 6.817765 ATGGTTTTTCTGCGAGATAAAGAA 57.182 33.333 0.00 0.00 28.38 2.52
129 130 6.627395 TGGTTTTTCTGCGAGATAAAGAAA 57.373 33.333 0.00 0.00 37.97 2.52
130 131 7.214467 TGGTTTTTCTGCGAGATAAAGAAAT 57.786 32.000 0.00 0.00 39.12 2.17
131 132 8.330466 TGGTTTTTCTGCGAGATAAAGAAATA 57.670 30.769 0.00 0.00 39.12 1.40
132 133 8.450964 TGGTTTTTCTGCGAGATAAAGAAATAG 58.549 33.333 0.00 0.00 39.12 1.73
133 134 7.910683 GGTTTTTCTGCGAGATAAAGAAATAGG 59.089 37.037 0.00 0.00 39.12 2.57
134 135 6.604735 TTTCTGCGAGATAAAGAAATAGGC 57.395 37.500 0.00 0.00 35.54 3.93
135 136 5.276461 TCTGCGAGATAAAGAAATAGGCA 57.724 39.130 0.00 0.00 0.00 4.75
136 137 5.670485 TCTGCGAGATAAAGAAATAGGCAA 58.330 37.500 0.00 0.00 0.00 4.52
137 138 5.755375 TCTGCGAGATAAAGAAATAGGCAAG 59.245 40.000 0.00 0.00 0.00 4.01
138 139 4.816385 TGCGAGATAAAGAAATAGGCAAGG 59.184 41.667 0.00 0.00 0.00 3.61
139 140 5.057149 GCGAGATAAAGAAATAGGCAAGGA 58.943 41.667 0.00 0.00 0.00 3.36
140 141 5.527582 GCGAGATAAAGAAATAGGCAAGGAA 59.472 40.000 0.00 0.00 0.00 3.36
141 142 6.511929 GCGAGATAAAGAAATAGGCAAGGAAC 60.512 42.308 0.00 0.00 0.00 3.62
166 167 4.934515 GCACTAGGCACTAAGTTAGTAGG 58.065 47.826 15.13 5.70 42.17 3.18
167 168 4.401837 GCACTAGGCACTAAGTTAGTAGGT 59.598 45.833 15.13 7.29 42.17 3.08
168 169 5.105432 GCACTAGGCACTAAGTTAGTAGGTT 60.105 44.000 15.13 4.85 42.17 3.50
169 170 6.096001 GCACTAGGCACTAAGTTAGTAGGTTA 59.904 42.308 15.13 5.65 42.17 2.85
170 171 7.681543 GCACTAGGCACTAAGTTAGTAGGTTAG 60.682 44.444 15.13 14.98 42.17 2.34
171 172 7.338957 CACTAGGCACTAAGTTAGTAGGTTAGT 59.661 40.741 15.13 15.49 42.17 2.24
172 173 6.772360 AGGCACTAAGTTAGTAGGTTAGTC 57.228 41.667 15.13 4.00 35.30 2.59
173 174 5.655974 AGGCACTAAGTTAGTAGGTTAGTCC 59.344 44.000 15.13 7.80 35.30 3.85
174 175 5.420104 GGCACTAAGTTAGTAGGTTAGTCCA 59.580 44.000 15.13 0.00 35.30 4.02
175 176 6.097981 GGCACTAAGTTAGTAGGTTAGTCCAT 59.902 42.308 15.13 0.00 35.30 3.41
176 177 7.201835 GCACTAAGTTAGTAGGTTAGTCCATC 58.798 42.308 15.13 0.00 35.30 3.51
177 178 7.147949 GCACTAAGTTAGTAGGTTAGTCCATCA 60.148 40.741 15.13 0.00 35.30 3.07
178 179 8.746530 CACTAAGTTAGTAGGTTAGTCCATCAA 58.253 37.037 15.13 0.00 35.30 2.57
179 180 9.317827 ACTAAGTTAGTAGGTTAGTCCATCAAA 57.682 33.333 14.00 0.00 37.23 2.69
182 183 9.668497 AAGTTAGTAGGTTAGTCCATCAAAATC 57.332 33.333 0.00 0.00 39.02 2.17
183 184 8.822805 AGTTAGTAGGTTAGTCCATCAAAATCA 58.177 33.333 0.00 0.00 39.02 2.57
184 185 9.614792 GTTAGTAGGTTAGTCCATCAAAATCAT 57.385 33.333 0.00 0.00 39.02 2.45
195 196 8.970020 AGTCCATCAAAATCATATAAAAGTGCA 58.030 29.630 0.00 0.00 0.00 4.57
196 197 9.023967 GTCCATCAAAATCATATAAAAGTGCAC 57.976 33.333 9.40 9.40 0.00 4.57
197 198 8.196771 TCCATCAAAATCATATAAAAGTGCACC 58.803 33.333 14.63 0.00 0.00 5.01
198 199 7.980662 CCATCAAAATCATATAAAAGTGCACCA 59.019 33.333 14.63 0.00 0.00 4.17
199 200 9.368674 CATCAAAATCATATAAAAGTGCACCAA 57.631 29.630 14.63 0.00 0.00 3.67
200 201 9.941325 ATCAAAATCATATAAAAGTGCACCAAA 57.059 25.926 14.63 0.00 0.00 3.28
201 202 9.770097 TCAAAATCATATAAAAGTGCACCAAAA 57.230 25.926 14.63 0.00 0.00 2.44
202 203 9.810231 CAAAATCATATAAAAGTGCACCAAAAC 57.190 29.630 14.63 0.00 0.00 2.43
203 204 8.546597 AAATCATATAAAAGTGCACCAAAACC 57.453 30.769 14.63 0.00 0.00 3.27
204 205 6.656632 TCATATAAAAGTGCACCAAAACCA 57.343 33.333 14.63 0.00 0.00 3.67
205 206 7.238486 TCATATAAAAGTGCACCAAAACCAT 57.762 32.000 14.63 0.83 0.00 3.55
206 207 8.354711 TCATATAAAAGTGCACCAAAACCATA 57.645 30.769 14.63 3.12 0.00 2.74
207 208 8.976353 TCATATAAAAGTGCACCAAAACCATAT 58.024 29.630 14.63 5.30 0.00 1.78
212 213 8.916628 AAAAGTGCACCAAAACCATATAAAAT 57.083 26.923 14.63 0.00 0.00 1.82
213 214 8.546597 AAAGTGCACCAAAACCATATAAAATC 57.453 30.769 14.63 0.00 0.00 2.17
214 215 7.238486 AGTGCACCAAAACCATATAAAATCA 57.762 32.000 14.63 0.00 0.00 2.57
215 216 7.322664 AGTGCACCAAAACCATATAAAATCAG 58.677 34.615 14.63 0.00 0.00 2.90
216 217 7.039082 AGTGCACCAAAACCATATAAAATCAGT 60.039 33.333 14.63 0.00 0.00 3.41
217 218 7.063308 GTGCACCAAAACCATATAAAATCAGTG 59.937 37.037 5.22 0.00 0.00 3.66
218 219 7.096551 GCACCAAAACCATATAAAATCAGTGT 58.903 34.615 0.00 0.00 0.00 3.55
219 220 8.247562 GCACCAAAACCATATAAAATCAGTGTA 58.752 33.333 0.00 0.00 0.00 2.90
227 228 8.413229 ACCATATAAAATCAGTGTAAACATGGC 58.587 33.333 0.00 0.00 33.00 4.40
228 229 8.412456 CCATATAAAATCAGTGTAAACATGGCA 58.588 33.333 0.00 0.00 0.00 4.92
229 230 9.970395 CATATAAAATCAGTGTAAACATGGCAT 57.030 29.630 0.00 0.00 0.00 4.40
230 231 9.970395 ATATAAAATCAGTGTAAACATGGCATG 57.030 29.630 25.31 25.31 0.00 4.06
231 232 5.981088 AAATCAGTGTAAACATGGCATGA 57.019 34.783 32.74 8.95 0.00 3.07
232 233 5.981088 AATCAGTGTAAACATGGCATGAA 57.019 34.783 32.74 15.06 0.00 2.57
233 234 6.534475 AATCAGTGTAAACATGGCATGAAT 57.466 33.333 32.74 21.56 0.00 2.57
234 235 7.643569 AATCAGTGTAAACATGGCATGAATA 57.356 32.000 32.74 20.59 0.00 1.75
235 236 6.435430 TCAGTGTAAACATGGCATGAATAC 57.565 37.500 32.74 28.55 0.00 1.89
236 237 6.179756 TCAGTGTAAACATGGCATGAATACT 58.820 36.000 32.74 23.85 0.00 2.12
237 238 6.093909 TCAGTGTAAACATGGCATGAATACTG 59.906 38.462 32.74 30.66 34.75 2.74
238 239 5.036737 GTGTAAACATGGCATGAATACTGC 58.963 41.667 32.74 22.23 38.93 4.40
239 240 4.704057 TGTAAACATGGCATGAATACTGCA 59.296 37.500 32.74 16.99 41.47 4.41
240 241 5.360429 TGTAAACATGGCATGAATACTGCAT 59.640 36.000 32.74 5.02 41.47 3.96
241 242 6.545298 TGTAAACATGGCATGAATACTGCATA 59.455 34.615 32.74 14.67 41.47 3.14
242 243 6.468333 AAACATGGCATGAATACTGCATAA 57.532 33.333 32.74 0.00 41.47 1.90
243 244 6.468333 AACATGGCATGAATACTGCATAAA 57.532 33.333 32.74 0.00 41.47 1.40
244 245 6.659745 ACATGGCATGAATACTGCATAAAT 57.340 33.333 32.74 3.01 41.47 1.40
245 246 7.058023 ACATGGCATGAATACTGCATAAATT 57.942 32.000 32.74 2.32 41.47 1.82
246 247 8.180706 ACATGGCATGAATACTGCATAAATTA 57.819 30.769 32.74 0.00 41.47 1.40
247 248 8.809066 ACATGGCATGAATACTGCATAAATTAT 58.191 29.630 32.74 1.55 41.47 1.28
250 251 9.294614 TGGCATGAATACTGCATAAATTATACA 57.705 29.630 0.00 0.00 41.47 2.29
263 264 9.973246 GCATAAATTATACATATGTTGGAGACG 57.027 33.333 14.77 0.00 31.25 4.18
266 267 8.958119 AAATTATACATATGTTGGAGACGTGT 57.042 30.769 14.77 0.00 0.00 4.49
267 268 8.589335 AATTATACATATGTTGGAGACGTGTC 57.411 34.615 14.77 3.66 0.00 3.67
268 269 3.953712 ACATATGTTGGAGACGTGTCA 57.046 42.857 15.28 0.00 0.00 3.58
269 270 3.849911 ACATATGTTGGAGACGTGTCAG 58.150 45.455 15.28 0.00 0.00 3.51
270 271 2.363788 TATGTTGGAGACGTGTCAGC 57.636 50.000 15.28 4.43 0.00 4.26
271 272 0.392706 ATGTTGGAGACGTGTCAGCA 59.607 50.000 15.28 9.87 0.00 4.41
272 273 0.392706 TGTTGGAGACGTGTCAGCAT 59.607 50.000 15.28 0.00 0.00 3.79
273 274 1.071605 GTTGGAGACGTGTCAGCATC 58.928 55.000 15.28 0.18 0.00 3.91
274 275 0.037326 TTGGAGACGTGTCAGCATCC 60.037 55.000 15.28 0.00 0.00 3.51
275 276 1.153549 GGAGACGTGTCAGCATCCC 60.154 63.158 15.28 0.00 0.00 3.85
276 277 1.153549 GAGACGTGTCAGCATCCCC 60.154 63.158 8.00 0.00 0.00 4.81
277 278 1.888436 GAGACGTGTCAGCATCCCCA 61.888 60.000 8.00 0.00 0.00 4.96
278 279 1.003839 GACGTGTCAGCATCCCCAA 60.004 57.895 0.00 0.00 0.00 4.12
279 280 1.003355 ACGTGTCAGCATCCCCAAG 60.003 57.895 0.00 0.00 0.00 3.61
280 281 2.401766 CGTGTCAGCATCCCCAAGC 61.402 63.158 0.00 0.00 0.00 4.01
281 282 1.001641 GTGTCAGCATCCCCAAGCT 60.002 57.895 0.00 0.00 42.94 3.74
282 283 0.610232 GTGTCAGCATCCCCAAGCTT 60.610 55.000 0.00 0.00 39.50 3.74
283 284 0.991146 TGTCAGCATCCCCAAGCTTA 59.009 50.000 0.00 0.00 39.50 3.09
284 285 1.354031 TGTCAGCATCCCCAAGCTTAA 59.646 47.619 0.00 0.00 39.50 1.85
285 286 2.025037 TGTCAGCATCCCCAAGCTTAAT 60.025 45.455 0.00 0.00 39.50 1.40
286 287 3.026694 GTCAGCATCCCCAAGCTTAATT 58.973 45.455 0.00 0.00 39.50 1.40
287 288 3.067320 GTCAGCATCCCCAAGCTTAATTC 59.933 47.826 0.00 0.00 39.50 2.17
288 289 2.363359 CAGCATCCCCAAGCTTAATTCC 59.637 50.000 0.00 0.00 39.50 3.01
289 290 2.245806 AGCATCCCCAAGCTTAATTCCT 59.754 45.455 0.00 0.00 38.01 3.36
290 291 2.625314 GCATCCCCAAGCTTAATTCCTC 59.375 50.000 0.00 0.00 0.00 3.71
291 292 3.225940 CATCCCCAAGCTTAATTCCTCC 58.774 50.000 0.00 0.00 0.00 4.30
292 293 2.573463 TCCCCAAGCTTAATTCCTCCT 58.427 47.619 0.00 0.00 0.00 3.69
293 294 2.509964 TCCCCAAGCTTAATTCCTCCTC 59.490 50.000 0.00 0.00 0.00 3.71
294 295 2.565841 CCCAAGCTTAATTCCTCCTCG 58.434 52.381 0.00 0.00 0.00 4.63
295 296 2.092914 CCCAAGCTTAATTCCTCCTCGT 60.093 50.000 0.00 0.00 0.00 4.18
296 297 3.198872 CCAAGCTTAATTCCTCCTCGTC 58.801 50.000 0.00 0.00 0.00 4.20
297 298 3.118592 CCAAGCTTAATTCCTCCTCGTCT 60.119 47.826 0.00 0.00 0.00 4.18
298 299 4.508662 CAAGCTTAATTCCTCCTCGTCTT 58.491 43.478 0.00 0.00 0.00 3.01
299 300 4.394439 AGCTTAATTCCTCCTCGTCTTC 57.606 45.455 0.00 0.00 0.00 2.87
300 301 3.769844 AGCTTAATTCCTCCTCGTCTTCA 59.230 43.478 0.00 0.00 0.00 3.02
301 302 4.223032 AGCTTAATTCCTCCTCGTCTTCAA 59.777 41.667 0.00 0.00 0.00 2.69
302 303 4.568760 GCTTAATTCCTCCTCGTCTTCAAG 59.431 45.833 0.00 0.00 0.00 3.02
303 304 5.725362 CTTAATTCCTCCTCGTCTTCAAGT 58.275 41.667 0.00 0.00 0.00 3.16
304 305 6.627508 GCTTAATTCCTCCTCGTCTTCAAGTA 60.628 42.308 0.00 0.00 0.00 2.24
305 306 4.993029 ATTCCTCCTCGTCTTCAAGTAG 57.007 45.455 0.00 0.00 0.00 2.57
306 307 2.724454 TCCTCCTCGTCTTCAAGTAGG 58.276 52.381 0.00 0.00 0.00 3.18
307 308 2.041350 TCCTCCTCGTCTTCAAGTAGGT 59.959 50.000 3.98 0.00 0.00 3.08
308 309 3.265221 TCCTCCTCGTCTTCAAGTAGGTA 59.735 47.826 3.98 0.00 0.00 3.08
309 310 4.015084 CCTCCTCGTCTTCAAGTAGGTAA 58.985 47.826 3.98 0.00 0.00 2.85
310 311 4.461781 CCTCCTCGTCTTCAAGTAGGTAAA 59.538 45.833 3.98 0.00 0.00 2.01
311 312 5.127356 CCTCCTCGTCTTCAAGTAGGTAAAT 59.873 44.000 3.98 0.00 0.00 1.40
312 313 6.351117 CCTCCTCGTCTTCAAGTAGGTAAATT 60.351 42.308 3.98 0.00 0.00 1.82
313 314 7.147949 CCTCCTCGTCTTCAAGTAGGTAAATTA 60.148 40.741 3.98 0.00 0.00 1.40
314 315 8.302515 TCCTCGTCTTCAAGTAGGTAAATTAT 57.697 34.615 3.98 0.00 0.00 1.28
315 316 8.195436 TCCTCGTCTTCAAGTAGGTAAATTATG 58.805 37.037 3.98 0.00 0.00 1.90
316 317 8.195436 CCTCGTCTTCAAGTAGGTAAATTATGA 58.805 37.037 0.00 0.00 0.00 2.15
317 318 9.582431 CTCGTCTTCAAGTAGGTAAATTATGAA 57.418 33.333 0.00 0.00 0.00 2.57
318 319 9.932207 TCGTCTTCAAGTAGGTAAATTATGAAA 57.068 29.630 0.00 0.00 0.00 2.69
347 348 9.956720 AATAATTTATGAAGTGTGAATGCTAGC 57.043 29.630 8.10 8.10 0.00 3.42
348 349 7.395190 AATTTATGAAGTGTGAATGCTAGCA 57.605 32.000 21.85 21.85 0.00 3.49
349 350 7.578310 ATTTATGAAGTGTGAATGCTAGCAT 57.422 32.000 24.67 24.67 38.46 3.79
350 351 8.681486 ATTTATGAAGTGTGAATGCTAGCATA 57.319 30.769 29.77 13.39 35.31 3.14
351 352 7.719778 TTATGAAGTGTGAATGCTAGCATAG 57.280 36.000 29.77 0.00 43.09 2.23
352 353 5.089970 TGAAGTGTGAATGCTAGCATAGT 57.910 39.130 29.77 16.11 41.93 2.12
353 354 4.872124 TGAAGTGTGAATGCTAGCATAGTG 59.128 41.667 29.77 0.00 41.93 2.74
354 355 3.201290 AGTGTGAATGCTAGCATAGTGC 58.799 45.455 29.77 19.26 45.46 4.40
369 370 6.956299 GCATAGTGCAAAAGTTTGATCAAT 57.044 33.333 9.40 0.00 44.26 2.57
370 371 6.758149 GCATAGTGCAAAAGTTTGATCAATG 58.242 36.000 9.40 5.30 44.26 2.82
371 372 6.587226 GCATAGTGCAAAAGTTTGATCAATGA 59.413 34.615 9.40 0.00 44.26 2.57
372 373 7.277098 GCATAGTGCAAAAGTTTGATCAATGAT 59.723 33.333 9.40 0.00 44.26 2.45
373 374 9.791820 CATAGTGCAAAAGTTTGATCAATGATA 57.208 29.630 9.40 0.00 40.55 2.15
376 377 9.715121 AGTGCAAAAGTTTGATCAATGATAATT 57.285 25.926 9.40 0.00 40.55 1.40
377 378 9.962759 GTGCAAAAGTTTGATCAATGATAATTC 57.037 29.630 9.40 0.00 40.55 2.17
378 379 9.932207 TGCAAAAGTTTGATCAATGATAATTCT 57.068 25.926 9.40 0.00 40.55 2.40
399 400 7.899178 TTCTAATCACTTTTTCGTAGCATCA 57.101 32.000 0.00 0.00 0.00 3.07
400 401 8.492673 TTCTAATCACTTTTTCGTAGCATCAT 57.507 30.769 0.00 0.00 0.00 2.45
401 402 8.492673 TCTAATCACTTTTTCGTAGCATCATT 57.507 30.769 0.00 0.00 0.00 2.57
402 403 9.594478 TCTAATCACTTTTTCGTAGCATCATTA 57.406 29.630 0.00 0.00 0.00 1.90
437 438 8.854614 AACAGTAGCTCATTTCTCATAAAACT 57.145 30.769 0.00 0.00 0.00 2.66
438 439 8.854614 ACAGTAGCTCATTTCTCATAAAACTT 57.145 30.769 0.00 0.00 0.00 2.66
439 440 8.940952 ACAGTAGCTCATTTCTCATAAAACTTC 58.059 33.333 0.00 0.00 0.00 3.01
440 441 9.160496 CAGTAGCTCATTTCTCATAAAACTTCT 57.840 33.333 0.00 0.00 0.00 2.85
441 442 9.377312 AGTAGCTCATTTCTCATAAAACTTCTC 57.623 33.333 0.00 0.00 0.00 2.87
442 443 9.155975 GTAGCTCATTTCTCATAAAACTTCTCA 57.844 33.333 0.00 0.00 0.00 3.27
443 444 8.804912 AGCTCATTTCTCATAAAACTTCTCAT 57.195 30.769 0.00 0.00 0.00 2.90
444 445 8.675504 AGCTCATTTCTCATAAAACTTCTCATG 58.324 33.333 0.00 0.00 0.00 3.07
445 446 8.671921 GCTCATTTCTCATAAAACTTCTCATGA 58.328 33.333 0.00 0.00 0.00 3.07
451 452 9.730705 TTCTCATAAAACTTCTCATGATCAAGT 57.269 29.630 12.41 12.41 31.48 3.16
454 455 9.102757 TCATAAAACTTCTCATGATCAAGTAGC 57.897 33.333 16.68 0.00 30.00 3.58
455 456 8.886719 CATAAAACTTCTCATGATCAAGTAGCA 58.113 33.333 16.68 8.23 30.00 3.49
456 457 7.750229 AAAACTTCTCATGATCAAGTAGCAA 57.250 32.000 16.68 0.00 30.00 3.91
457 458 6.981762 AACTTCTCATGATCAAGTAGCAAG 57.018 37.500 16.68 6.32 30.00 4.01
458 459 6.047511 ACTTCTCATGATCAAGTAGCAAGT 57.952 37.500 15.38 6.85 0.00 3.16
459 460 6.471146 ACTTCTCATGATCAAGTAGCAAGTT 58.529 36.000 15.38 0.00 0.00 2.66
460 461 7.615403 ACTTCTCATGATCAAGTAGCAAGTTA 58.385 34.615 15.38 0.00 0.00 2.24
461 462 8.263640 ACTTCTCATGATCAAGTAGCAAGTTAT 58.736 33.333 15.38 0.00 0.00 1.89
462 463 9.755804 CTTCTCATGATCAAGTAGCAAGTTATA 57.244 33.333 0.00 0.00 0.00 0.98
571 572 6.707440 TCGGGCAAACATTCATTATATGTT 57.293 33.333 0.00 0.00 45.49 2.71
603 604 7.226720 AGTCCACACTTAAAGTAACATTGACAG 59.773 37.037 0.00 0.00 0.00 3.51
610 611 8.952278 ACTTAAAGTAACATTGACAGAACAACA 58.048 29.630 0.00 0.00 32.50 3.33
612 613 7.624360 AAAGTAACATTGACAGAACAACAGA 57.376 32.000 0.00 0.00 32.50 3.41
841 847 4.122776 GTGCACTAGATGACTACCCATTG 58.877 47.826 10.32 0.00 0.00 2.82
934 941 9.787435 ATATAAGGTGTGTTCTCTAAACAACAA 57.213 29.630 0.00 0.00 33.86 2.83
936 943 6.436843 AGGTGTGTTCTCTAAACAACAAAG 57.563 37.500 0.00 0.00 33.86 2.77
994 1001 4.916983 TTGGAAGGAACACAATTCACTG 57.083 40.909 0.00 0.00 0.00 3.66
1007 1014 5.065218 CACAATTCACTGTACTAATGGGAGC 59.935 44.000 0.00 0.00 0.00 4.70
1022 1029 4.521130 TGGGAGCTGATTATATCGTCAC 57.479 45.455 0.00 0.00 0.00 3.67
1068 1075 4.101114 TCAATCCTTGCTACCTCACCTTA 58.899 43.478 0.00 0.00 0.00 2.69
1078 1085 5.112686 GCTACCTCACCTTAGTTGAATCAG 58.887 45.833 0.00 0.00 0.00 2.90
1372 1389 6.815089 ACTTACATTTCCATTTGCAGAACAA 58.185 32.000 0.00 0.00 36.13 2.83
1376 1393 3.451141 TTCCATTTGCAGAACAACACC 57.549 42.857 0.00 0.00 38.23 4.16
1398 1415 5.893255 ACCCTTTTAAGACCTAAACCGTTTT 59.107 36.000 0.96 0.00 0.00 2.43
1470 1487 5.899547 TCTCATGTACTCTCTCTCTCTCTCT 59.100 44.000 0.00 0.00 0.00 3.10
1471 1488 6.040955 TCTCATGTACTCTCTCTCTCTCTCTC 59.959 46.154 0.00 0.00 0.00 3.20
1473 1490 5.854010 TGTACTCTCTCTCTCTCTCTCTC 57.146 47.826 0.00 0.00 0.00 3.20
1475 1492 3.724478 ACTCTCTCTCTCTCTCTCTCCA 58.276 50.000 0.00 0.00 0.00 3.86
1477 1494 4.723789 ACTCTCTCTCTCTCTCTCTCCATT 59.276 45.833 0.00 0.00 0.00 3.16
1493 1510 2.592512 TCCATTCCCTCCCTCTCTTAGT 59.407 50.000 0.00 0.00 0.00 2.24
1497 1514 5.608860 CCATTCCCTCCCTCTCTTAGTTATT 59.391 44.000 0.00 0.00 0.00 1.40
1499 1516 7.292591 CCATTCCCTCCCTCTCTTAGTTATTTA 59.707 40.741 0.00 0.00 0.00 1.40
1503 1520 8.297646 TCCCTCCCTCTCTTAGTTATTTATCTT 58.702 37.037 0.00 0.00 0.00 2.40
1504 1521 8.939932 CCCTCCCTCTCTTAGTTATTTATCTTT 58.060 37.037 0.00 0.00 0.00 2.52
1532 1549 8.815141 TTTTCATGTGTTAGATTTGGAATGTG 57.185 30.769 0.00 0.00 0.00 3.21
1657 1678 7.201767 GCCTAAGCATGACTTATTCAAATCACT 60.202 37.037 0.00 0.00 40.11 3.41
1680 1703 8.454106 CACTGGAAAAATAGTAGAAATCCACAG 58.546 37.037 0.00 0.00 32.42 3.66
1863 2254 4.998672 TGTAAATGTCTGGTAGGAAAACCG 59.001 41.667 0.00 0.00 42.91 4.44
1864 2255 3.782656 AATGTCTGGTAGGAAAACCGT 57.217 42.857 0.00 0.00 42.91 4.83
1896 2287 4.269183 CCAATAAGGCACACCATCACTTA 58.731 43.478 0.00 0.00 39.06 2.24
1905 2296 8.396272 AGGCACACCATCACTTATTTATTATC 57.604 34.615 0.00 0.00 39.06 1.75
2040 2433 5.132648 TGAGTATATGGGCTTCACCAAATCT 59.867 40.000 0.00 0.00 45.13 2.40
2346 2747 7.859325 TTTTGTAGTAGTTGGAGGCATTATC 57.141 36.000 0.00 0.00 0.00 1.75
2446 2851 1.879380 GGTGCTACAACTCACAATGCA 59.121 47.619 0.00 0.00 35.04 3.96
2535 2940 7.967890 TTATGGCATACAAGATCACTACATG 57.032 36.000 6.72 0.00 0.00 3.21
2539 2944 5.221521 GGCATACAAGATCACTACATGAGGA 60.222 44.000 0.00 0.00 41.91 3.71
2652 3143 1.337074 ACGATACCCGCGTCTTTTTGA 60.337 47.619 4.92 0.00 43.32 2.69
2658 3149 2.359531 ACCCGCGTCTTTTTGAATGAAA 59.640 40.909 4.92 0.00 0.00 2.69
2719 3217 8.376942 CGAATAGCTACAAAAAGAGAGAGAAAC 58.623 37.037 0.00 0.00 0.00 2.78
2726 3224 5.654209 ACAAAAAGAGAGAGAAACTGGCTTT 59.346 36.000 0.00 0.00 33.20 3.51
2793 3293 8.008513 TGAACTACATAGGTATTCTCCAAGTC 57.991 38.462 9.50 0.00 0.00 3.01
2875 3377 4.409570 GACATGCATGACTTGTTGATGTC 58.590 43.478 32.75 12.94 36.82 3.06
2880 3382 3.852939 GCATGACTTGTTGATGTCGCAAA 60.853 43.478 0.00 0.00 36.10 3.68
2899 3401 6.547141 TCGCAAAGATCCATGGATAGAAAAAT 59.453 34.615 27.38 3.19 34.60 1.82
2963 3469 0.098200 CATGACTTGCTGATGTGGCG 59.902 55.000 0.00 0.00 0.00 5.69
2986 3494 6.201517 CGTGGTTGCATGGATAGAAATTAAG 58.798 40.000 0.00 0.00 0.00 1.85
3343 3903 4.599041 CAAATTCTGGAGATTGGGTGGTA 58.401 43.478 0.00 0.00 0.00 3.25
3425 3985 5.752892 TGGAACAAAACGTATACAAGCAA 57.247 34.783 3.32 0.00 31.92 3.91
3579 4148 1.074889 TGACCCCTTTTGGACTAAGGC 59.925 52.381 0.00 0.00 44.07 4.35
3856 4434 1.140312 TTTCACCTCCCACTCAAGCT 58.860 50.000 0.00 0.00 0.00 3.74
3884 4465 1.321474 CATGACACTTGTGGCAGGTT 58.679 50.000 14.88 0.00 0.00 3.50
3909 4490 4.188462 TGGCGACCATAGTAAGTCAAATG 58.812 43.478 0.00 0.00 33.08 2.32
3966 4552 1.996798 CCTCTCTAGGCCCGAATACA 58.003 55.000 0.00 0.00 35.64 2.29
3971 4557 2.431057 CTCTAGGCCCGAATACACACTT 59.569 50.000 0.00 0.00 0.00 3.16
3995 4587 4.031611 GGAACCTAGATAGAACACCACCT 58.968 47.826 0.00 0.00 0.00 4.00
4060 4657 3.627577 GGATACGTGGAAGCATCAACATT 59.372 43.478 0.00 0.00 29.15 2.71
4075 4672 6.203338 GCATCAACATTTTGAACACCAATTCT 59.797 34.615 0.00 0.00 45.01 2.40
4094 4691 0.835971 TGTGCAAGCTCCTACCCTCA 60.836 55.000 0.00 0.00 0.00 3.86
4189 4787 6.183360 GGCTATGCAATTTGGAGCTATGATAG 60.183 42.308 0.00 0.00 33.57 2.08
4199 4797 5.397360 TGGAGCTATGATAGATTGGAGACA 58.603 41.667 3.13 0.00 39.83 3.41
4200 4798 5.244851 TGGAGCTATGATAGATTGGAGACAC 59.755 44.000 3.13 0.00 42.67 3.67
4262 4860 0.951525 TGCAATTGTCGGTACCGTGG 60.952 55.000 32.16 13.19 40.74 4.94
4263 4861 1.791662 CAATTGTCGGTACCGTGGC 59.208 57.895 32.16 22.67 40.74 5.01
4265 4863 2.438951 AATTGTCGGTACCGTGGCGT 62.439 55.000 32.16 14.47 40.74 5.68
4266 4864 2.438951 ATTGTCGGTACCGTGGCGTT 62.439 55.000 32.16 12.02 40.74 4.84
4285 4883 2.438434 GGGTTCATGCCCTGTCCG 60.438 66.667 1.28 0.00 45.22 4.79
4286 4884 2.438434 GGTTCATGCCCTGTCCGG 60.438 66.667 0.00 0.00 0.00 5.14
4326 4925 2.664851 CCGAGCGCACTTGTTGGA 60.665 61.111 11.47 0.00 0.00 3.53
4339 4938 5.009010 GCACTTGTTGGAAAGATCAAAGAGA 59.991 40.000 0.00 0.00 0.00 3.10
4395 4994 0.547471 TCCCTGATCTTGGGCTGACA 60.547 55.000 16.44 0.53 44.23 3.58
4398 4997 2.089980 CCTGATCTTGGGCTGACAAAG 58.910 52.381 0.00 0.00 0.00 2.77
4401 5000 3.614092 TGATCTTGGGCTGACAAAGATC 58.386 45.455 27.06 27.06 36.57 2.75
4402 5001 2.099141 TCTTGGGCTGACAAAGATCG 57.901 50.000 0.00 0.00 0.00 3.69
4412 5011 1.529438 GACAAAGATCGGCGTGAAACA 59.471 47.619 6.85 0.00 35.74 2.83
4424 5023 3.871006 GGCGTGAAACATAGTGATGATCA 59.129 43.478 0.00 0.00 35.74 2.92
4430 5029 7.170489 CGTGAAACATAGTGATGATCATAGCTT 59.830 37.037 8.54 0.00 35.99 3.74
4431 5030 8.494347 GTGAAACATAGTGATGATCATAGCTTC 58.506 37.037 8.54 4.80 35.99 3.86
4476 5084 5.929992 GGCTGAAGTGTTGTATGTACTTGTA 59.070 40.000 0.00 0.00 34.99 2.41
4517 5125 2.189594 CACAAGGAGGTGCAGATTGA 57.810 50.000 0.00 0.00 31.10 2.57
4553 5161 1.202940 GCTTGAACCCTCCTTGGAAGT 60.203 52.381 0.00 0.00 38.35 3.01
4554 5162 2.753168 GCTTGAACCCTCCTTGGAAGTT 60.753 50.000 4.91 4.91 38.35 2.66
4555 5163 3.497942 GCTTGAACCCTCCTTGGAAGTTA 60.498 47.826 5.16 0.00 38.35 2.24
4556 5164 4.811063 GCTTGAACCCTCCTTGGAAGTTAT 60.811 45.833 5.16 0.00 38.35 1.89
4573 5181 5.296813 AGTTATCCACGAATTTCTTGCAC 57.703 39.130 0.00 0.00 0.00 4.57
4576 5184 2.571212 TCCACGAATTTCTTGCACAGT 58.429 42.857 0.00 0.00 0.00 3.55
4577 5185 2.290367 TCCACGAATTTCTTGCACAGTG 59.710 45.455 0.00 0.00 0.00 3.66
4578 5186 2.033299 CCACGAATTTCTTGCACAGTGT 59.967 45.455 1.61 0.00 0.00 3.55
4579 5187 3.489059 CCACGAATTTCTTGCACAGTGTT 60.489 43.478 1.61 0.00 0.00 3.32
4580 5188 3.483196 CACGAATTTCTTGCACAGTGTTG 59.517 43.478 1.61 0.00 0.00 3.33
4581 5189 3.044986 CGAATTTCTTGCACAGTGTTGG 58.955 45.455 1.61 0.00 0.00 3.77
4582 5190 3.243035 CGAATTTCTTGCACAGTGTTGGA 60.243 43.478 1.61 0.00 0.00 3.53
4583 5191 4.681744 GAATTTCTTGCACAGTGTTGGAA 58.318 39.130 1.61 1.75 0.00 3.53
4584 5192 3.781079 TTTCTTGCACAGTGTTGGAAG 57.219 42.857 15.71 15.71 44.12 3.46
4585 5193 2.418368 TCTTGCACAGTGTTGGAAGT 57.582 45.000 18.87 0.00 43.45 3.01
4586 5194 3.552132 TCTTGCACAGTGTTGGAAGTA 57.448 42.857 18.87 9.20 43.45 2.24
4587 5195 4.085357 TCTTGCACAGTGTTGGAAGTAT 57.915 40.909 18.87 0.00 43.45 2.12
4588 5196 3.814842 TCTTGCACAGTGTTGGAAGTATG 59.185 43.478 18.87 2.60 43.45 2.39
4589 5197 1.879380 TGCACAGTGTTGGAAGTATGC 59.121 47.619 1.61 0.00 0.00 3.14
4590 5198 1.200020 GCACAGTGTTGGAAGTATGCC 59.800 52.381 1.61 0.00 0.00 4.40
4591 5199 1.812571 CACAGTGTTGGAAGTATGCCC 59.187 52.381 0.00 0.00 24.52 5.36
4592 5200 1.705186 ACAGTGTTGGAAGTATGCCCT 59.295 47.619 0.00 0.00 24.52 5.19
4593 5201 2.910319 ACAGTGTTGGAAGTATGCCCTA 59.090 45.455 0.00 0.00 24.52 3.53
4594 5202 3.055094 ACAGTGTTGGAAGTATGCCCTAG 60.055 47.826 0.00 0.00 24.52 3.02
4595 5203 3.197766 CAGTGTTGGAAGTATGCCCTAGA 59.802 47.826 0.00 0.00 24.52 2.43
4596 5204 3.452627 AGTGTTGGAAGTATGCCCTAGAG 59.547 47.826 0.00 0.00 24.52 2.43
4597 5205 2.771943 TGTTGGAAGTATGCCCTAGAGG 59.228 50.000 0.00 0.00 24.52 3.69
4649 5257 9.739276 TTTCCTTGTTCATGATAATTGTCTAGT 57.261 29.630 0.00 0.00 0.00 2.57
4673 5281 8.840321 AGTATTCATGCTATAATTGTGTTGTCC 58.160 33.333 0.00 0.00 0.00 4.02
4674 5282 7.643569 ATTCATGCTATAATTGTGTTGTCCA 57.356 32.000 0.00 0.00 0.00 4.02
4675 5283 6.682423 TCATGCTATAATTGTGTTGTCCAG 57.318 37.500 0.00 0.00 0.00 3.86
4676 5284 6.413892 TCATGCTATAATTGTGTTGTCCAGA 58.586 36.000 0.00 0.00 0.00 3.86
4677 5285 6.883756 TCATGCTATAATTGTGTTGTCCAGAA 59.116 34.615 0.00 0.00 0.00 3.02
4678 5286 7.392953 TCATGCTATAATTGTGTTGTCCAGAAA 59.607 33.333 0.00 0.00 29.05 2.52
4679 5287 7.701539 TGCTATAATTGTGTTGTCCAGAAAT 57.298 32.000 0.00 0.00 29.05 2.17
4680 5288 7.761409 TGCTATAATTGTGTTGTCCAGAAATC 58.239 34.615 0.00 0.00 29.05 2.17
4681 5289 7.611467 TGCTATAATTGTGTTGTCCAGAAATCT 59.389 33.333 0.00 0.00 29.05 2.40
4682 5290 8.462016 GCTATAATTGTGTTGTCCAGAAATCTT 58.538 33.333 0.00 0.00 29.05 2.40
4688 5296 8.684386 TTGTGTTGTCCAGAAATCTTAATACA 57.316 30.769 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.326264 AAGACCCATGAGGACACTGC 59.674 55.000 7.17 0.00 39.89 4.40
1 2 1.905215 AGAAGACCCATGAGGACACTG 59.095 52.381 7.17 0.00 39.89 3.66
2 3 1.905215 CAGAAGACCCATGAGGACACT 59.095 52.381 7.17 3.13 39.89 3.55
3 4 1.065854 CCAGAAGACCCATGAGGACAC 60.066 57.143 7.17 1.28 39.89 3.67
4 5 1.279496 CCAGAAGACCCATGAGGACA 58.721 55.000 7.17 0.00 39.89 4.02
5 6 1.208293 GACCAGAAGACCCATGAGGAC 59.792 57.143 7.17 1.60 39.89 3.85
6 7 1.573108 GACCAGAAGACCCATGAGGA 58.427 55.000 7.17 0.00 39.89 3.71
7 8 0.543749 GGACCAGAAGACCCATGAGG 59.456 60.000 0.00 0.00 43.78 3.86
8 9 1.577736 AGGACCAGAAGACCCATGAG 58.422 55.000 0.00 0.00 0.00 2.90
9 10 1.909302 GAAGGACCAGAAGACCCATGA 59.091 52.381 0.00 0.00 0.00 3.07
10 11 1.065126 GGAAGGACCAGAAGACCCATG 60.065 57.143 0.00 0.00 38.79 3.66
11 12 1.203492 AGGAAGGACCAGAAGACCCAT 60.203 52.381 0.00 0.00 42.04 4.00
12 13 0.193574 AGGAAGGACCAGAAGACCCA 59.806 55.000 0.00 0.00 42.04 4.51
13 14 0.906066 GAGGAAGGACCAGAAGACCC 59.094 60.000 0.00 0.00 42.04 4.46
14 15 0.533032 CGAGGAAGGACCAGAAGACC 59.467 60.000 0.00 0.00 42.04 3.85
15 16 1.546961 TCGAGGAAGGACCAGAAGAC 58.453 55.000 0.00 0.00 42.04 3.01
16 17 2.304221 TTCGAGGAAGGACCAGAAGA 57.696 50.000 0.00 0.00 42.04 2.87
17 18 2.663826 CTTCGAGGAAGGACCAGAAG 57.336 55.000 0.00 0.00 43.41 2.85
18 19 0.608640 GCTTCGAGGAAGGACCAGAA 59.391 55.000 0.00 0.00 39.76 3.02
19 20 0.251832 AGCTTCGAGGAAGGACCAGA 60.252 55.000 0.00 0.00 39.76 3.86
20 21 0.610687 AAGCTTCGAGGAAGGACCAG 59.389 55.000 0.00 0.00 39.76 4.00
21 22 0.608640 GAAGCTTCGAGGAAGGACCA 59.391 55.000 11.40 0.00 39.76 4.02
22 23 3.444751 GAAGCTTCGAGGAAGGACC 57.555 57.895 11.40 0.00 39.76 4.46
33 34 0.391793 CAAGAGACCCCCGAAGCTTC 60.392 60.000 16.84 16.84 0.00 3.86
34 35 1.128188 ACAAGAGACCCCCGAAGCTT 61.128 55.000 0.00 0.00 0.00 3.74
35 36 1.536662 ACAAGAGACCCCCGAAGCT 60.537 57.895 0.00 0.00 0.00 3.74
36 37 1.376037 CACAAGAGACCCCCGAAGC 60.376 63.158 0.00 0.00 0.00 3.86
37 38 0.396811 AACACAAGAGACCCCCGAAG 59.603 55.000 0.00 0.00 0.00 3.79
38 39 0.395312 GAACACAAGAGACCCCCGAA 59.605 55.000 0.00 0.00 0.00 4.30
39 40 0.471211 AGAACACAAGAGACCCCCGA 60.471 55.000 0.00 0.00 0.00 5.14
40 41 1.263356 TAGAACACAAGAGACCCCCG 58.737 55.000 0.00 0.00 0.00 5.73
41 42 5.431179 TTTATAGAACACAAGAGACCCCC 57.569 43.478 0.00 0.00 0.00 5.40
94 95 5.788531 CGCAGAAAAACCATACTAAACGAAG 59.211 40.000 0.00 0.00 0.00 3.79
95 96 5.466058 TCGCAGAAAAACCATACTAAACGAA 59.534 36.000 0.00 0.00 0.00 3.85
96 97 4.989797 TCGCAGAAAAACCATACTAAACGA 59.010 37.500 0.00 0.00 0.00 3.85
97 98 5.119588 TCTCGCAGAAAAACCATACTAAACG 59.880 40.000 0.00 0.00 34.09 3.60
98 99 6.476243 TCTCGCAGAAAAACCATACTAAAC 57.524 37.500 0.00 0.00 34.09 2.01
99 100 8.780846 TTATCTCGCAGAAAAACCATACTAAA 57.219 30.769 0.00 0.00 34.09 1.85
100 101 8.780846 TTTATCTCGCAGAAAAACCATACTAA 57.219 30.769 0.00 0.00 34.09 2.24
101 102 8.255206 TCTTTATCTCGCAGAAAAACCATACTA 58.745 33.333 0.00 0.00 34.09 1.82
102 103 7.103641 TCTTTATCTCGCAGAAAAACCATACT 58.896 34.615 0.00 0.00 34.09 2.12
103 104 7.303634 TCTTTATCTCGCAGAAAAACCATAC 57.696 36.000 0.00 0.00 34.09 2.39
104 105 7.915293 TTCTTTATCTCGCAGAAAAACCATA 57.085 32.000 0.00 0.00 34.09 2.74
105 106 6.817765 TTCTTTATCTCGCAGAAAAACCAT 57.182 33.333 0.00 0.00 34.09 3.55
106 107 6.627395 TTTCTTTATCTCGCAGAAAAACCA 57.373 33.333 0.00 0.00 34.35 3.67
107 108 7.910683 CCTATTTCTTTATCTCGCAGAAAAACC 59.089 37.037 0.00 0.00 39.40 3.27
108 109 7.429630 GCCTATTTCTTTATCTCGCAGAAAAAC 59.570 37.037 0.00 0.00 39.40 2.43
109 110 7.120579 TGCCTATTTCTTTATCTCGCAGAAAAA 59.879 33.333 0.00 0.00 39.40 1.94
110 111 6.597672 TGCCTATTTCTTTATCTCGCAGAAAA 59.402 34.615 0.00 0.00 39.40 2.29
111 112 6.112734 TGCCTATTTCTTTATCTCGCAGAAA 58.887 36.000 0.00 0.00 40.07 2.52
112 113 5.670485 TGCCTATTTCTTTATCTCGCAGAA 58.330 37.500 0.00 0.00 34.09 3.02
113 114 5.276461 TGCCTATTTCTTTATCTCGCAGA 57.724 39.130 0.00 0.00 0.00 4.26
114 115 5.049818 CCTTGCCTATTTCTTTATCTCGCAG 60.050 44.000 0.00 0.00 0.00 5.18
115 116 4.816385 CCTTGCCTATTTCTTTATCTCGCA 59.184 41.667 0.00 0.00 0.00 5.10
116 117 5.057149 TCCTTGCCTATTTCTTTATCTCGC 58.943 41.667 0.00 0.00 0.00 5.03
117 118 6.763610 AGTTCCTTGCCTATTTCTTTATCTCG 59.236 38.462 0.00 0.00 0.00 4.04
118 119 8.401709 CAAGTTCCTTGCCTATTTCTTTATCTC 58.598 37.037 0.00 0.00 34.63 2.75
119 120 8.286191 CAAGTTCCTTGCCTATTTCTTTATCT 57.714 34.615 0.00 0.00 34.63 1.98
144 145 4.401837 ACCTACTAACTTAGTGCCTAGTGC 59.598 45.833 11.17 0.00 39.81 4.40
145 146 6.527057 AACCTACTAACTTAGTGCCTAGTG 57.473 41.667 11.17 0.00 39.81 2.74
146 147 7.409358 ACTAACCTACTAACTTAGTGCCTAGT 58.591 38.462 11.17 9.23 39.81 2.57
147 148 7.013178 GGACTAACCTACTAACTTAGTGCCTAG 59.987 44.444 11.17 8.75 39.81 3.02
148 149 6.830838 GGACTAACCTACTAACTTAGTGCCTA 59.169 42.308 11.17 0.00 39.81 3.93
149 150 5.655974 GGACTAACCTACTAACTTAGTGCCT 59.344 44.000 11.17 0.00 39.81 4.75
150 151 5.420104 TGGACTAACCTACTAACTTAGTGCC 59.580 44.000 11.17 1.78 37.78 5.01
151 152 6.521151 TGGACTAACCTACTAACTTAGTGC 57.479 41.667 11.17 0.00 38.58 4.40
152 153 8.289939 TGATGGACTAACCTACTAACTTAGTG 57.710 38.462 11.17 0.00 37.30 2.74
153 154 8.890410 TTGATGGACTAACCTACTAACTTAGT 57.110 34.615 6.68 6.68 39.86 2.24
156 157 9.668497 GATTTTGATGGACTAACCTACTAACTT 57.332 33.333 0.00 0.00 39.86 2.66
157 158 8.822805 TGATTTTGATGGACTAACCTACTAACT 58.177 33.333 0.00 0.00 39.86 2.24
158 159 9.614792 ATGATTTTGATGGACTAACCTACTAAC 57.385 33.333 0.00 0.00 39.86 2.34
169 170 8.970020 TGCACTTTTATATGATTTTGATGGACT 58.030 29.630 0.00 0.00 0.00 3.85
170 171 9.023967 GTGCACTTTTATATGATTTTGATGGAC 57.976 33.333 10.32 0.00 0.00 4.02
171 172 8.196771 GGTGCACTTTTATATGATTTTGATGGA 58.803 33.333 17.98 0.00 0.00 3.41
172 173 7.980662 TGGTGCACTTTTATATGATTTTGATGG 59.019 33.333 17.98 0.00 0.00 3.51
173 174 8.929827 TGGTGCACTTTTATATGATTTTGATG 57.070 30.769 17.98 0.00 0.00 3.07
174 175 9.941325 TTTGGTGCACTTTTATATGATTTTGAT 57.059 25.926 17.98 0.00 0.00 2.57
175 176 9.770097 TTTTGGTGCACTTTTATATGATTTTGA 57.230 25.926 17.98 0.00 0.00 2.69
176 177 9.810231 GTTTTGGTGCACTTTTATATGATTTTG 57.190 29.630 17.98 0.00 0.00 2.44
177 178 8.998377 GGTTTTGGTGCACTTTTATATGATTTT 58.002 29.630 17.98 0.00 0.00 1.82
178 179 8.153550 TGGTTTTGGTGCACTTTTATATGATTT 58.846 29.630 17.98 0.00 0.00 2.17
179 180 7.675062 TGGTTTTGGTGCACTTTTATATGATT 58.325 30.769 17.98 0.00 0.00 2.57
180 181 7.238486 TGGTTTTGGTGCACTTTTATATGAT 57.762 32.000 17.98 0.00 0.00 2.45
181 182 6.656632 TGGTTTTGGTGCACTTTTATATGA 57.343 33.333 17.98 0.00 0.00 2.15
187 188 8.916628 ATTTTATATGGTTTTGGTGCACTTTT 57.083 26.923 17.98 0.00 0.00 2.27
188 189 8.153550 TGATTTTATATGGTTTTGGTGCACTTT 58.846 29.630 17.98 0.00 0.00 2.66
189 190 7.675062 TGATTTTATATGGTTTTGGTGCACTT 58.325 30.769 17.98 0.00 0.00 3.16
190 191 7.039082 ACTGATTTTATATGGTTTTGGTGCACT 60.039 33.333 17.98 0.00 0.00 4.40
191 192 7.063308 CACTGATTTTATATGGTTTTGGTGCAC 59.937 37.037 8.80 8.80 0.00 4.57
192 193 7.095910 CACTGATTTTATATGGTTTTGGTGCA 58.904 34.615 0.00 0.00 0.00 4.57
193 194 7.096551 ACACTGATTTTATATGGTTTTGGTGC 58.903 34.615 0.00 0.00 0.00 5.01
201 202 8.413229 GCCATGTTTACACTGATTTTATATGGT 58.587 33.333 0.00 0.00 34.25 3.55
202 203 8.412456 TGCCATGTTTACACTGATTTTATATGG 58.588 33.333 0.00 0.00 34.73 2.74
203 204 9.970395 ATGCCATGTTTACACTGATTTTATATG 57.030 29.630 0.00 0.00 0.00 1.78
204 205 9.970395 CATGCCATGTTTACACTGATTTTATAT 57.030 29.630 0.00 0.00 0.00 0.86
205 206 9.183368 TCATGCCATGTTTACACTGATTTTATA 57.817 29.630 4.31 0.00 0.00 0.98
206 207 8.065473 TCATGCCATGTTTACACTGATTTTAT 57.935 30.769 4.31 0.00 0.00 1.40
207 208 7.459795 TCATGCCATGTTTACACTGATTTTA 57.540 32.000 4.31 0.00 0.00 1.52
208 209 6.343716 TCATGCCATGTTTACACTGATTTT 57.656 33.333 4.31 0.00 0.00 1.82
209 210 5.981088 TCATGCCATGTTTACACTGATTT 57.019 34.783 4.31 0.00 0.00 2.17
210 211 5.981088 TTCATGCCATGTTTACACTGATT 57.019 34.783 4.31 0.00 0.00 2.57
211 212 6.830324 AGTATTCATGCCATGTTTACACTGAT 59.170 34.615 16.43 0.61 0.00 2.90
212 213 6.093909 CAGTATTCATGCCATGTTTACACTGA 59.906 38.462 16.43 0.00 0.00 3.41
213 214 6.260377 CAGTATTCATGCCATGTTTACACTG 58.740 40.000 16.43 13.54 0.00 3.66
214 215 5.163622 GCAGTATTCATGCCATGTTTACACT 60.164 40.000 16.43 7.84 37.73 3.55
215 216 5.036737 GCAGTATTCATGCCATGTTTACAC 58.963 41.667 16.43 8.57 37.73 2.90
216 217 4.704057 TGCAGTATTCATGCCATGTTTACA 59.296 37.500 16.43 0.00 43.18 2.41
217 218 5.247507 TGCAGTATTCATGCCATGTTTAC 57.752 39.130 4.31 7.89 43.18 2.01
218 219 7.579761 TTATGCAGTATTCATGCCATGTTTA 57.420 32.000 4.31 0.00 43.18 2.01
219 220 6.468333 TTATGCAGTATTCATGCCATGTTT 57.532 33.333 4.31 0.00 43.18 2.83
220 221 6.468333 TTTATGCAGTATTCATGCCATGTT 57.532 33.333 4.31 0.00 43.18 2.71
221 222 6.659745 ATTTATGCAGTATTCATGCCATGT 57.340 33.333 4.31 0.00 43.18 3.21
224 225 9.294614 TGTATAATTTATGCAGTATTCATGCCA 57.705 29.630 3.40 0.00 43.18 4.92
237 238 9.973246 CGTCTCCAACATATGTATAATTTATGC 57.027 33.333 9.21 0.00 0.00 3.14
241 242 8.958119 ACACGTCTCCAACATATGTATAATTT 57.042 30.769 9.21 0.00 0.00 1.82
242 243 8.201464 TGACACGTCTCCAACATATGTATAATT 58.799 33.333 9.21 0.00 0.00 1.40
243 244 7.722363 TGACACGTCTCCAACATATGTATAAT 58.278 34.615 9.21 0.00 0.00 1.28
244 245 7.102847 TGACACGTCTCCAACATATGTATAA 57.897 36.000 9.21 0.00 0.00 0.98
245 246 6.702716 TGACACGTCTCCAACATATGTATA 57.297 37.500 9.21 0.00 0.00 1.47
246 247 5.592054 CTGACACGTCTCCAACATATGTAT 58.408 41.667 9.21 0.00 0.00 2.29
247 248 4.676986 GCTGACACGTCTCCAACATATGTA 60.677 45.833 9.21 0.00 0.00 2.29
248 249 3.849911 CTGACACGTCTCCAACATATGT 58.150 45.455 1.41 1.41 0.00 2.29
249 250 2.604914 GCTGACACGTCTCCAACATATG 59.395 50.000 0.00 0.00 0.00 1.78
250 251 2.233676 TGCTGACACGTCTCCAACATAT 59.766 45.455 0.00 0.00 0.00 1.78
251 252 1.616374 TGCTGACACGTCTCCAACATA 59.384 47.619 0.00 0.00 0.00 2.29
252 253 0.392706 TGCTGACACGTCTCCAACAT 59.607 50.000 0.00 0.00 0.00 2.71
253 254 0.392706 ATGCTGACACGTCTCCAACA 59.607 50.000 0.00 0.00 0.00 3.33
254 255 1.071605 GATGCTGACACGTCTCCAAC 58.928 55.000 0.00 0.00 0.00 3.77
255 256 0.037326 GGATGCTGACACGTCTCCAA 60.037 55.000 0.00 0.00 0.00 3.53
256 257 1.591703 GGATGCTGACACGTCTCCA 59.408 57.895 0.00 0.00 0.00 3.86
257 258 1.153549 GGGATGCTGACACGTCTCC 60.154 63.158 0.00 0.00 0.00 3.71
258 259 1.153549 GGGGATGCTGACACGTCTC 60.154 63.158 0.00 0.00 0.00 3.36
259 260 1.480212 TTGGGGATGCTGACACGTCT 61.480 55.000 0.00 0.00 0.00 4.18
260 261 1.003839 TTGGGGATGCTGACACGTC 60.004 57.895 0.00 0.00 0.00 4.34
261 262 1.003355 CTTGGGGATGCTGACACGT 60.003 57.895 0.00 0.00 0.00 4.49
262 263 2.401766 GCTTGGGGATGCTGACACG 61.402 63.158 0.00 0.00 0.00 4.49
263 264 0.610232 AAGCTTGGGGATGCTGACAC 60.610 55.000 0.00 0.00 39.71 3.67
264 265 0.991146 TAAGCTTGGGGATGCTGACA 59.009 50.000 9.86 0.00 39.71 3.58
265 266 2.128771 TTAAGCTTGGGGATGCTGAC 57.871 50.000 9.86 0.00 39.71 3.51
266 267 3.290710 GAATTAAGCTTGGGGATGCTGA 58.709 45.455 9.86 0.00 39.71 4.26
267 268 2.363359 GGAATTAAGCTTGGGGATGCTG 59.637 50.000 9.86 0.00 39.71 4.41
268 269 2.245806 AGGAATTAAGCTTGGGGATGCT 59.754 45.455 9.86 0.00 41.82 3.79
269 270 2.625314 GAGGAATTAAGCTTGGGGATGC 59.375 50.000 9.86 0.00 0.00 3.91
270 271 3.117360 AGGAGGAATTAAGCTTGGGGATG 60.117 47.826 9.86 0.00 0.00 3.51
271 272 3.134471 AGGAGGAATTAAGCTTGGGGAT 58.866 45.455 9.86 0.00 0.00 3.85
272 273 2.509964 GAGGAGGAATTAAGCTTGGGGA 59.490 50.000 9.86 0.00 0.00 4.81
273 274 2.746472 CGAGGAGGAATTAAGCTTGGGG 60.746 54.545 9.86 0.00 0.00 4.96
274 275 2.092914 ACGAGGAGGAATTAAGCTTGGG 60.093 50.000 9.86 0.00 0.00 4.12
275 276 3.118592 AGACGAGGAGGAATTAAGCTTGG 60.119 47.826 9.86 0.00 0.00 3.61
276 277 4.130286 AGACGAGGAGGAATTAAGCTTG 57.870 45.455 9.86 0.00 0.00 4.01
277 278 4.223032 TGAAGACGAGGAGGAATTAAGCTT 59.777 41.667 3.48 3.48 0.00 3.74
278 279 3.769844 TGAAGACGAGGAGGAATTAAGCT 59.230 43.478 0.00 0.00 0.00 3.74
279 280 4.124851 TGAAGACGAGGAGGAATTAAGC 57.875 45.455 0.00 0.00 0.00 3.09
280 281 5.725362 ACTTGAAGACGAGGAGGAATTAAG 58.275 41.667 0.00 0.00 32.13 1.85
281 282 5.740290 ACTTGAAGACGAGGAGGAATTAA 57.260 39.130 0.00 0.00 32.13 1.40
282 283 6.452494 CTACTTGAAGACGAGGAGGAATTA 57.548 41.667 0.00 0.00 35.39 1.40
283 284 5.331876 CTACTTGAAGACGAGGAGGAATT 57.668 43.478 0.00 0.00 35.39 2.17
284 285 4.993029 CTACTTGAAGACGAGGAGGAAT 57.007 45.455 0.00 0.00 35.39 3.01
288 289 5.640189 TTTACCTACTTGAAGACGAGGAG 57.360 43.478 15.77 0.00 38.03 3.69
289 290 6.600882 AATTTACCTACTTGAAGACGAGGA 57.399 37.500 15.77 0.00 32.13 3.71
290 291 8.195436 TCATAATTTACCTACTTGAAGACGAGG 58.805 37.037 0.00 5.17 32.13 4.63
291 292 9.582431 TTCATAATTTACCTACTTGAAGACGAG 57.418 33.333 0.00 0.00 0.00 4.18
292 293 9.932207 TTTCATAATTTACCTACTTGAAGACGA 57.068 29.630 0.00 0.00 0.00 4.20
321 322 9.956720 GCTAGCATTCACACTTCATAAATTATT 57.043 29.630 10.63 0.00 0.00 1.40
322 323 9.123902 TGCTAGCATTCACACTTCATAAATTAT 57.876 29.630 14.93 0.00 0.00 1.28
323 324 8.504812 TGCTAGCATTCACACTTCATAAATTA 57.495 30.769 14.93 0.00 0.00 1.40
324 325 7.395190 TGCTAGCATTCACACTTCATAAATT 57.605 32.000 14.93 0.00 0.00 1.82
325 326 7.578310 ATGCTAGCATTCACACTTCATAAAT 57.422 32.000 24.67 0.00 31.82 1.40
326 327 7.770433 ACTATGCTAGCATTCACACTTCATAAA 59.230 33.333 33.74 10.83 37.82 1.40
327 328 7.225341 CACTATGCTAGCATTCACACTTCATAA 59.775 37.037 33.74 11.26 37.82 1.90
328 329 6.703165 CACTATGCTAGCATTCACACTTCATA 59.297 38.462 33.74 11.46 37.82 2.15
329 330 5.526479 CACTATGCTAGCATTCACACTTCAT 59.474 40.000 33.74 9.82 37.82 2.57
330 331 4.872124 CACTATGCTAGCATTCACACTTCA 59.128 41.667 33.74 12.70 37.82 3.02
331 332 4.260538 GCACTATGCTAGCATTCACACTTC 60.261 45.833 33.74 12.27 40.96 3.01
332 333 3.624861 GCACTATGCTAGCATTCACACTT 59.375 43.478 33.74 11.88 40.96 3.16
333 334 3.201290 GCACTATGCTAGCATTCACACT 58.799 45.455 33.74 12.66 40.96 3.55
334 335 2.938451 TGCACTATGCTAGCATTCACAC 59.062 45.455 33.74 19.68 45.31 3.82
335 336 3.264998 TGCACTATGCTAGCATTCACA 57.735 42.857 33.74 22.70 45.31 3.58
336 337 4.621068 TTTGCACTATGCTAGCATTCAC 57.379 40.909 33.74 20.63 45.31 3.18
337 338 4.701651 ACTTTTGCACTATGCTAGCATTCA 59.298 37.500 33.74 22.07 45.31 2.57
338 339 5.240713 ACTTTTGCACTATGCTAGCATTC 57.759 39.130 33.74 20.04 45.31 2.67
339 340 5.649782 AACTTTTGCACTATGCTAGCATT 57.350 34.783 33.74 15.72 45.31 3.56
340 341 5.183713 TCAAACTTTTGCACTATGCTAGCAT 59.816 36.000 31.60 31.60 45.31 3.79
341 342 4.518590 TCAAACTTTTGCACTATGCTAGCA 59.481 37.500 21.85 21.85 45.31 3.49
342 343 5.046910 TCAAACTTTTGCACTATGCTAGC 57.953 39.130 8.10 8.10 45.31 3.42
343 344 6.845302 TGATCAAACTTTTGCACTATGCTAG 58.155 36.000 0.00 0.35 45.31 3.42
344 345 6.816134 TGATCAAACTTTTGCACTATGCTA 57.184 33.333 0.00 0.00 45.31 3.49
345 346 5.710513 TGATCAAACTTTTGCACTATGCT 57.289 34.783 0.00 0.00 45.31 3.79
346 347 6.587226 TCATTGATCAAACTTTTGCACTATGC 59.413 34.615 13.09 0.00 45.29 3.14
347 348 8.697846 ATCATTGATCAAACTTTTGCACTATG 57.302 30.769 13.09 1.42 38.05 2.23
350 351 9.715121 AATTATCATTGATCAAACTTTTGCACT 57.285 25.926 13.09 0.00 38.05 4.40
351 352 9.962759 GAATTATCATTGATCAAACTTTTGCAC 57.037 29.630 13.09 0.00 38.05 4.57
352 353 9.932207 AGAATTATCATTGATCAAACTTTTGCA 57.068 25.926 13.09 0.00 38.05 4.08
373 374 8.946085 TGATGCTACGAAAAAGTGATTAGAATT 58.054 29.630 0.00 0.00 0.00 2.17
374 375 8.492673 TGATGCTACGAAAAAGTGATTAGAAT 57.507 30.769 0.00 0.00 0.00 2.40
375 376 7.899178 TGATGCTACGAAAAAGTGATTAGAA 57.101 32.000 0.00 0.00 0.00 2.10
376 377 8.492673 AATGATGCTACGAAAAAGTGATTAGA 57.507 30.769 0.00 0.00 0.00 2.10
411 412 9.289782 AGTTTTATGAGAAATGAGCTACTGTTT 57.710 29.630 0.00 0.00 0.00 2.83
412 413 8.854614 AGTTTTATGAGAAATGAGCTACTGTT 57.145 30.769 0.00 0.00 0.00 3.16
413 414 8.854614 AAGTTTTATGAGAAATGAGCTACTGT 57.145 30.769 0.00 0.00 0.00 3.55
414 415 9.160496 AGAAGTTTTATGAGAAATGAGCTACTG 57.840 33.333 0.00 0.00 0.00 2.74
415 416 9.377312 GAGAAGTTTTATGAGAAATGAGCTACT 57.623 33.333 0.00 0.00 0.00 2.57
416 417 9.155975 TGAGAAGTTTTATGAGAAATGAGCTAC 57.844 33.333 0.00 0.00 0.00 3.58
417 418 9.896645 ATGAGAAGTTTTATGAGAAATGAGCTA 57.103 29.630 0.00 0.00 0.00 3.32
418 419 8.675504 CATGAGAAGTTTTATGAGAAATGAGCT 58.324 33.333 0.00 0.00 0.00 4.09
419 420 8.671921 TCATGAGAAGTTTTATGAGAAATGAGC 58.328 33.333 0.00 0.00 0.00 4.26
425 426 9.730705 ACTTGATCATGAGAAGTTTTATGAGAA 57.269 29.630 15.03 0.00 33.53 2.87
428 429 9.102757 GCTACTTGATCATGAGAAGTTTTATGA 57.897 33.333 21.74 7.70 34.42 2.15
429 430 8.886719 TGCTACTTGATCATGAGAAGTTTTATG 58.113 33.333 21.74 11.92 32.27 1.90
430 431 9.453572 TTGCTACTTGATCATGAGAAGTTTTAT 57.546 29.630 21.74 5.73 32.27 1.40
431 432 8.846943 TTGCTACTTGATCATGAGAAGTTTTA 57.153 30.769 21.74 8.77 32.27 1.52
432 433 7.446625 ACTTGCTACTTGATCATGAGAAGTTTT 59.553 33.333 21.74 6.29 32.27 2.43
433 434 6.939163 ACTTGCTACTTGATCATGAGAAGTTT 59.061 34.615 21.74 6.83 32.27 2.66
434 435 6.471146 ACTTGCTACTTGATCATGAGAAGTT 58.529 36.000 21.74 10.73 32.27 2.66
435 436 6.047511 ACTTGCTACTTGATCATGAGAAGT 57.952 37.500 20.81 20.81 34.36 3.01
436 437 6.981762 AACTTGCTACTTGATCATGAGAAG 57.018 37.500 15.03 13.33 0.00 2.85
466 467 9.102757 GCTTGATTGATACTTTCTACTTGATCA 57.897 33.333 0.00 0.00 0.00 2.92
467 468 8.555361 GGCTTGATTGATACTTTCTACTTGATC 58.445 37.037 0.00 0.00 0.00 2.92
468 469 8.270744 AGGCTTGATTGATACTTTCTACTTGAT 58.729 33.333 0.00 0.00 0.00 2.57
469 470 7.624549 AGGCTTGATTGATACTTTCTACTTGA 58.375 34.615 0.00 0.00 0.00 3.02
470 471 7.856145 AGGCTTGATTGATACTTTCTACTTG 57.144 36.000 0.00 0.00 0.00 3.16
550 551 9.128107 CGATTAACATATAATGAATGTTTGCCC 57.872 33.333 6.75 0.00 43.31 5.36
551 552 9.891828 TCGATTAACATATAATGAATGTTTGCC 57.108 29.630 6.75 0.00 43.31 4.52
571 572 7.660112 TGTTACTTTAAGTGTGGACTCGATTA 58.340 34.615 8.00 0.00 0.00 1.75
841 847 6.531594 TCATACTGTCGATTCACTCAACATTC 59.468 38.462 0.00 0.00 0.00 2.67
958 965 4.882427 TCCTTCCAATGAAACACACGTAAA 59.118 37.500 0.00 0.00 0.00 2.01
994 1001 7.773149 ACGATATAATCAGCTCCCATTAGTAC 58.227 38.462 0.00 0.00 0.00 2.73
1007 1014 7.953158 AAGACCAATGTGACGATATAATCAG 57.047 36.000 0.00 0.00 0.00 2.90
1022 1029 8.081633 TGAACAAAAAGCATAGTAAGACCAATG 58.918 33.333 0.00 0.00 0.00 2.82
1068 1075 1.899814 TCCACGCCTACTGATTCAACT 59.100 47.619 0.00 0.00 0.00 3.16
1078 1085 1.598130 GATGGCCATCCACGCCTAC 60.598 63.158 32.15 7.00 46.92 3.18
1291 1308 9.959721 ACAAAGCCTCTGAAAGATATAAGTAAA 57.040 29.630 0.00 0.00 45.62 2.01
1346 1363 6.700960 TGTTCTGCAAATGGAAATGTAAGTTG 59.299 34.615 0.00 0.00 0.00 3.16
1372 1389 4.141413 ACGGTTTAGGTCTTAAAAGGGTGT 60.141 41.667 0.00 0.00 33.22 4.16
1376 1393 6.210796 CCAAAACGGTTTAGGTCTTAAAAGG 58.789 40.000 6.53 0.00 33.22 3.11
1398 1415 4.657814 AATTAGCTCTCCAAGGAAACCA 57.342 40.909 0.00 0.00 0.00 3.67
1470 1487 1.324014 AGAGAGGGAGGGAATGGAGA 58.676 55.000 0.00 0.00 0.00 3.71
1471 1488 2.188818 AAGAGAGGGAGGGAATGGAG 57.811 55.000 0.00 0.00 0.00 3.86
1473 1490 3.053359 ACTAAGAGAGGGAGGGAATGG 57.947 52.381 0.00 0.00 0.00 3.16
1475 1492 9.106977 GATAAATAACTAAGAGAGGGAGGGAAT 57.893 37.037 0.00 0.00 0.00 3.01
1477 1494 7.838241 AGATAAATAACTAAGAGAGGGAGGGA 58.162 38.462 0.00 0.00 0.00 4.20
1505 1522 8.641541 ACATTCCAAATCTAACACATGAAAAGT 58.358 29.630 0.00 0.00 0.00 2.66
1657 1678 8.160765 TGACTGTGGATTTCTACTATTTTTCCA 58.839 33.333 0.00 0.00 0.00 3.53
1680 1703 4.756642 TGATTGAGGCGGATCATTAATGAC 59.243 41.667 20.19 13.40 40.03 3.06
1864 2255 3.865477 CCTTATTGGCCGTGGTACA 57.135 52.632 0.00 0.00 0.00 2.90
1905 2296 5.590530 ACCAGAACAACTATAGAGCAGAG 57.409 43.478 6.78 0.00 0.00 3.35
1981 2374 2.421952 GCCATAGAATTGTCCTGGCTCA 60.422 50.000 17.23 0.00 44.32 4.26
2040 2433 5.105146 GCTCCAGATTCTTGAGAGGTTTCTA 60.105 44.000 16.76 0.00 32.53 2.10
2311 2709 9.629878 TCCAACTACTACAAAATACCAGAAAAA 57.370 29.630 0.00 0.00 0.00 1.94
2335 2736 5.662674 ATACTTAGTCCGATAATGCCTCC 57.337 43.478 0.00 0.00 0.00 4.30
2446 2851 2.116238 ACTTGCAGGTACATATCCCGT 58.884 47.619 0.00 0.00 0.00 5.28
2535 2940 5.428253 TGTACCTTGTTGATGCTAATCCTC 58.572 41.667 0.00 0.00 31.15 3.71
2539 2944 7.176515 TGAATGTTGTACCTTGTTGATGCTAAT 59.823 33.333 0.00 0.00 0.00 1.73
2652 3143 6.038382 TGCATTGCATTCAACAAAGTTTCATT 59.962 30.769 7.38 0.00 34.60 2.57
2693 3190 8.376942 GTTTCTCTCTCTTTTTGTAGCTATTCG 58.623 37.037 0.00 0.00 0.00 3.34
2719 3217 6.116126 AGGCACTCTATTAACTAAAAGCCAG 58.884 40.000 0.00 0.00 40.72 4.85
2789 3289 9.685276 TCATGAATTTATATGTGTTGGAGACTT 57.315 29.630 0.00 0.00 0.00 3.01
2875 3377 5.756195 TTTTCTATCCATGGATCTTTGCG 57.244 39.130 30.61 12.83 36.17 4.85
2963 3469 6.096846 ACCTTAATTTCTATCCATGCAACCAC 59.903 38.462 0.00 0.00 0.00 4.16
3425 3985 5.943416 TCAAGTAATTCACAAATCCGGTCAT 59.057 36.000 0.00 0.00 0.00 3.06
3579 4148 1.940613 GCCTATCAACTAACTTGGCCG 59.059 52.381 0.00 0.00 33.45 6.13
3826 4401 5.069914 AGTGGGAGGTGAAAACCAAAAATAC 59.930 40.000 0.00 0.00 34.26 1.89
3831 4409 2.024846 TGAGTGGGAGGTGAAAACCAAA 60.025 45.455 0.00 0.00 34.26 3.28
3856 4434 4.078537 CCACAAGTGTCATGTTGGGAATA 58.921 43.478 0.00 0.00 0.00 1.75
3884 4465 2.029623 GACTTACTATGGTCGCCAGGA 58.970 52.381 4.90 0.00 36.75 3.86
3920 4506 2.158971 TCATATGGTCTTTGCTGCGCTA 60.159 45.455 9.73 0.00 0.00 4.26
3954 4540 0.035439 CCAAGTGTGTATTCGGGCCT 60.035 55.000 0.84 0.00 0.00 5.19
3960 4546 5.416271 TCTAGGTTCCCAAGTGTGTATTC 57.584 43.478 0.00 0.00 0.00 1.75
3966 4552 5.046520 GTGTTCTATCTAGGTTCCCAAGTGT 60.047 44.000 0.00 0.00 0.00 3.55
3971 4557 3.773119 GTGGTGTTCTATCTAGGTTCCCA 59.227 47.826 0.00 0.00 0.00 4.37
3982 4568 5.286221 ACCCATTAGTAGGTGGTGTTCTAT 58.714 41.667 3.75 0.00 34.20 1.98
4060 4657 4.431809 CTTGCACAGAATTGGTGTTCAAA 58.568 39.130 8.24 0.34 39.05 2.69
4075 4672 0.835971 TGAGGGTAGGAGCTTGCACA 60.836 55.000 0.00 0.00 0.00 4.57
4094 4691 6.647334 TCCATGTTTGTATGTTTGTCATGT 57.353 33.333 0.00 0.00 37.91 3.21
4145 4743 0.933700 CCTACCCACAATCCCCCATT 59.066 55.000 0.00 0.00 0.00 3.16
4248 4846 2.641439 AAACGCCACGGTACCGACAA 62.641 55.000 39.52 0.00 42.83 3.18
4279 4877 1.889530 GAAGGAGGACACCCGGACAG 61.890 65.000 0.73 0.00 37.58 3.51
4281 4879 2.657066 GGAAGGAGGACACCCGGAC 61.657 68.421 0.73 0.00 37.58 4.79
4285 4883 0.547954 AGGAAGGAAGGAGGACACCC 60.548 60.000 0.00 0.00 0.00 4.61
4286 4884 1.279558 GAAGGAAGGAAGGAGGACACC 59.720 57.143 0.00 0.00 0.00 4.16
4339 4938 3.002791 CAAGGTGCACATAGTTGTCGAT 58.997 45.455 20.43 0.00 32.34 3.59
4348 4947 2.100031 CGCTCGCAAGGTGCACATA 61.100 57.895 20.43 0.00 45.36 2.29
4365 4964 1.480137 AGATCAGGGAGAAGCTCAACG 59.520 52.381 0.00 0.00 31.08 4.10
4395 4994 3.370978 CACTATGTTTCACGCCGATCTTT 59.629 43.478 0.00 0.00 0.00 2.52
4398 4997 2.536365 TCACTATGTTTCACGCCGATC 58.464 47.619 0.00 0.00 0.00 3.69
4401 5000 2.267426 TCATCACTATGTTTCACGCCG 58.733 47.619 0.00 0.00 34.50 6.46
4402 5001 3.871006 TGATCATCACTATGTTTCACGCC 59.129 43.478 0.00 0.00 34.50 5.68
4405 5004 7.959689 AGCTATGATCATCACTATGTTTCAC 57.040 36.000 12.53 0.00 32.82 3.18
4412 5011 6.581171 TGACGAAGCTATGATCATCACTAT 57.419 37.500 12.53 2.53 0.00 2.12
4424 5023 3.162666 TCCCCGATATTGACGAAGCTAT 58.837 45.455 0.00 0.00 0.00 2.97
4430 5029 2.432874 ACAACATCCCCGATATTGACGA 59.567 45.455 0.00 0.00 31.17 4.20
4431 5030 2.543848 CACAACATCCCCGATATTGACG 59.456 50.000 0.00 0.00 31.17 4.35
4553 5161 4.759693 ACTGTGCAAGAAATTCGTGGATAA 59.240 37.500 10.64 0.91 28.76 1.75
4554 5162 4.154015 CACTGTGCAAGAAATTCGTGGATA 59.846 41.667 10.64 5.51 28.76 2.59
4555 5163 3.058016 CACTGTGCAAGAAATTCGTGGAT 60.058 43.478 10.64 0.00 28.76 3.41
4556 5164 2.290367 CACTGTGCAAGAAATTCGTGGA 59.710 45.455 10.64 5.07 0.00 4.02
4560 5168 3.044986 CCAACACTGTGCAAGAAATTCG 58.955 45.455 7.90 0.00 0.00 3.34
4566 5174 2.418368 ACTTCCAACACTGTGCAAGA 57.582 45.000 7.90 0.00 0.00 3.02
4573 5181 2.496899 AGGGCATACTTCCAACACTG 57.503 50.000 0.00 0.00 0.00 3.66
4576 5184 2.771943 CCTCTAGGGCATACTTCCAACA 59.228 50.000 0.00 0.00 0.00 3.33
4577 5185 3.477210 CCTCTAGGGCATACTTCCAAC 57.523 52.381 0.00 0.00 0.00 3.77
4623 5231 9.739276 ACTAGACAATTATCATGAACAAGGAAA 57.261 29.630 0.00 0.00 0.00 3.13
4647 5255 8.840321 GGACAACACAATTATAGCATGAATACT 58.160 33.333 0.00 0.00 0.00 2.12
4648 5256 8.620416 TGGACAACACAATTATAGCATGAATAC 58.380 33.333 0.00 0.00 0.00 1.89
4649 5257 8.744568 TGGACAACACAATTATAGCATGAATA 57.255 30.769 0.00 0.00 0.00 1.75
4650 5258 7.557358 TCTGGACAACACAATTATAGCATGAAT 59.443 33.333 0.00 0.00 0.00 2.57
4651 5259 6.883756 TCTGGACAACACAATTATAGCATGAA 59.116 34.615 0.00 0.00 0.00 2.57
4652 5260 6.413892 TCTGGACAACACAATTATAGCATGA 58.586 36.000 0.00 0.00 0.00 3.07
4653 5261 6.682423 TCTGGACAACACAATTATAGCATG 57.318 37.500 0.00 0.00 0.00 4.06
4654 5262 7.701539 TTTCTGGACAACACAATTATAGCAT 57.298 32.000 0.00 0.00 0.00 3.79
4655 5263 7.611467 AGATTTCTGGACAACACAATTATAGCA 59.389 33.333 0.00 0.00 0.00 3.49
4656 5264 7.989826 AGATTTCTGGACAACACAATTATAGC 58.010 34.615 0.00 0.00 0.00 2.97
4662 5270 9.295825 TGTATTAAGATTTCTGGACAACACAAT 57.704 29.630 0.00 0.00 0.00 2.71
4663 5271 8.684386 TGTATTAAGATTTCTGGACAACACAA 57.316 30.769 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.