Multiple sequence alignment - TraesCS5B01G253500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G253500 chr5B 100.000 4348 0 0 1 4348 436212882 436217229 0.000000e+00 8030.0
1 TraesCS5B01G253500 chr5B 83.572 2727 313 79 706 3363 436244232 436246892 0.000000e+00 2429.0
2 TraesCS5B01G253500 chr5B 94.849 796 37 3 3525 4319 680734886 680734094 0.000000e+00 1240.0
3 TraesCS5B01G253500 chr5B 89.825 285 10 4 348 630 436243814 436244081 8.950000e-92 348.0
4 TraesCS5B01G253500 chr5D 94.277 3215 124 22 348 3525 368289932 368293123 0.000000e+00 4863.0
5 TraesCS5B01G253500 chr5D 84.484 2694 284 56 710 3361 368299201 368301802 0.000000e+00 2536.0
6 TraesCS5B01G253500 chr5D 92.105 266 18 2 3614 3877 23080568 23080304 5.310000e-99 372.0
7 TraesCS5B01G253500 chr5D 90.526 285 14 4 348 630 368298719 368298992 8.890000e-97 364.0
8 TraesCS5B01G253500 chr5A 89.156 3200 235 54 378 3523 470174458 470177599 0.000000e+00 3884.0
9 TraesCS5B01G253500 chr5A 83.358 2686 288 74 733 3361 470184015 470186598 0.000000e+00 2337.0
10 TraesCS5B01G253500 chr5A 83.219 292 14 8 348 630 470183597 470183862 7.270000e-58 235.0
11 TraesCS5B01G253500 chr1B 95.603 796 33 2 3525 4319 601412843 601413637 0.000000e+00 1275.0
12 TraesCS5B01G253500 chr1B 100.000 38 0 0 4311 4348 601413641 601413678 2.170000e-08 71.3
13 TraesCS5B01G253500 chr1A 92.444 450 24 4 3879 4319 264987664 264987216 6.130000e-178 634.0
14 TraesCS5B01G253500 chr1A 86.555 357 34 7 3525 3877 264988154 264987808 8.820000e-102 381.0
15 TraesCS5B01G253500 chr1A 94.444 126 7 0 4150 4275 264982725 264982600 1.230000e-45 195.0
16 TraesCS5B01G253500 chr1A 94.505 91 5 0 4229 4319 264982602 264982512 1.630000e-29 141.0
17 TraesCS5B01G253500 chr1A 100.000 43 0 0 3879 3921 350496250 350496292 3.600000e-11 80.5
18 TraesCS5B01G253500 chr7A 88.692 451 15 16 3879 4319 686953708 686953284 6.450000e-143 518.0
19 TraesCS5B01G253500 chr7A 87.640 356 36 7 3525 3877 686954230 686953880 1.460000e-109 407.0
20 TraesCS5B01G253500 chr7A 100.000 30 0 0 3524 3553 27518336 27518307 6.070000e-04 56.5
21 TraesCS5B01G253500 chr7D 92.135 267 17 3 3614 3877 506734199 506734464 1.480000e-99 374.0
22 TraesCS5B01G253500 chr7D 91.045 268 19 4 3612 3876 254714196 254714461 1.490000e-94 357.0
23 TraesCS5B01G253500 chr6D 92.105 266 18 2 3614 3877 319689037 319688773 5.310000e-99 372.0
24 TraesCS5B01G253500 chr6D 91.386 267 20 2 3614 3878 191789994 191790259 3.200000e-96 363.0
25 TraesCS5B01G253500 chr6D 90.000 60 3 3 3879 3938 109690727 109690783 1.680000e-09 75.0
26 TraesCS5B01G253500 chr7B 91.760 267 17 4 3614 3877 470174121 470173857 2.470000e-97 366.0
27 TraesCS5B01G253500 chr2B 91.228 171 14 1 3926 4095 588398295 588398125 9.400000e-57 231.0
28 TraesCS5B01G253500 chr2B 83.398 259 19 8 4111 4348 588397574 588397319 7.320000e-53 219.0
29 TraesCS5B01G253500 chr3B 79.736 227 26 10 4112 4319 739847481 739847256 3.500000e-31 147.0
30 TraesCS5B01G253500 chr4B 100.000 43 0 0 3879 3921 336871155 336871197 3.600000e-11 80.5
31 TraesCS5B01G253500 chr6B 95.833 48 2 0 3879 3926 477062894 477062941 1.300000e-10 78.7
32 TraesCS5B01G253500 chr4A 89.062 64 3 4 3879 3939 530483785 530483723 4.660000e-10 76.8
33 TraesCS5B01G253500 chr1D 89.474 57 4 2 3879 3934 419639378 419639433 2.170000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G253500 chr5B 436212882 436217229 4347 False 8030.00 8030 100.0000 1 4348 1 chr5B.!!$F1 4347
1 TraesCS5B01G253500 chr5B 436243814 436246892 3078 False 1388.50 2429 86.6985 348 3363 2 chr5B.!!$F2 3015
2 TraesCS5B01G253500 chr5B 680734094 680734886 792 True 1240.00 1240 94.8490 3525 4319 1 chr5B.!!$R1 794
3 TraesCS5B01G253500 chr5D 368289932 368293123 3191 False 4863.00 4863 94.2770 348 3525 1 chr5D.!!$F1 3177
4 TraesCS5B01G253500 chr5D 368298719 368301802 3083 False 1450.00 2536 87.5050 348 3361 2 chr5D.!!$F2 3013
5 TraesCS5B01G253500 chr5A 470174458 470177599 3141 False 3884.00 3884 89.1560 378 3523 1 chr5A.!!$F1 3145
6 TraesCS5B01G253500 chr5A 470183597 470186598 3001 False 1286.00 2337 83.2885 348 3361 2 chr5A.!!$F2 3013
7 TraesCS5B01G253500 chr1B 601412843 601413678 835 False 673.15 1275 97.8015 3525 4348 2 chr1B.!!$F1 823
8 TraesCS5B01G253500 chr1A 264987216 264988154 938 True 507.50 634 89.4995 3525 4319 2 chr1A.!!$R2 794
9 TraesCS5B01G253500 chr7A 686953284 686954230 946 True 462.50 518 88.1660 3525 4319 2 chr7A.!!$R2 794
10 TraesCS5B01G253500 chr2B 588397319 588398295 976 True 225.00 231 87.3130 3926 4348 2 chr2B.!!$R1 422

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 141 0.036010 CATCACTCGGTCCTTGCCTT 60.036 55.000 0.00 0.0 0.00 4.35 F
344 345 0.037697 GGTTCAAACCGGGCCAATTC 60.038 55.000 6.32 0.0 39.66 2.17 F
1299 1486 0.107703 TGCCCGTGATTGATCCTGAC 60.108 55.000 0.00 0.0 0.00 3.51 F
1964 2160 1.478916 TGGACCGCATTTCATCTACGA 59.521 47.619 0.00 0.0 0.00 3.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1299 1486 0.163788 ACGAAGCGCACAAGAAATCG 59.836 50.000 11.47 8.58 35.16 3.34 R
1512 1705 1.059584 TGAAGGAACCACCAGCAGGA 61.060 55.000 0.35 0.00 42.04 3.86 R
3293 3630 1.002011 GGGCTTCCTCTTCCGCTTT 60.002 57.895 0.00 0.00 0.00 3.51 R
3735 4074 1.153997 GAACGAGAGAGGTGTCGGC 60.154 63.158 0.00 0.00 43.63 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 7.549615 TTGCAAATCATCATCAAACAAAACA 57.450 28.000 0.00 0.00 0.00 2.83
39 40 7.179927 TGCAAATCATCATCAAACAAAACAG 57.820 32.000 0.00 0.00 0.00 3.16
40 41 6.075280 GCAAATCATCATCAAACAAAACAGC 58.925 36.000 0.00 0.00 0.00 4.40
41 42 6.595794 CAAATCATCATCAAACAAAACAGCC 58.404 36.000 0.00 0.00 0.00 4.85
42 43 4.255833 TCATCATCAAACAAAACAGCCC 57.744 40.909 0.00 0.00 0.00 5.19
43 44 3.006752 TCATCATCAAACAAAACAGCCCC 59.993 43.478 0.00 0.00 0.00 5.80
44 45 2.392662 TCATCAAACAAAACAGCCCCA 58.607 42.857 0.00 0.00 0.00 4.96
45 46 2.102252 TCATCAAACAAAACAGCCCCAC 59.898 45.455 0.00 0.00 0.00 4.61
46 47 0.827368 TCAAACAAAACAGCCCCACC 59.173 50.000 0.00 0.00 0.00 4.61
47 48 0.829990 CAAACAAAACAGCCCCACCT 59.170 50.000 0.00 0.00 0.00 4.00
48 49 2.035632 CAAACAAAACAGCCCCACCTA 58.964 47.619 0.00 0.00 0.00 3.08
49 50 2.432510 CAAACAAAACAGCCCCACCTAA 59.567 45.455 0.00 0.00 0.00 2.69
50 51 1.995376 ACAAAACAGCCCCACCTAAG 58.005 50.000 0.00 0.00 0.00 2.18
51 52 1.497286 ACAAAACAGCCCCACCTAAGA 59.503 47.619 0.00 0.00 0.00 2.10
52 53 2.110011 ACAAAACAGCCCCACCTAAGAT 59.890 45.455 0.00 0.00 0.00 2.40
53 54 3.332485 ACAAAACAGCCCCACCTAAGATA 59.668 43.478 0.00 0.00 0.00 1.98
54 55 3.933861 AAACAGCCCCACCTAAGATAG 57.066 47.619 0.00 0.00 0.00 2.08
55 56 2.868964 ACAGCCCCACCTAAGATAGA 57.131 50.000 0.00 0.00 0.00 1.98
56 57 3.130734 ACAGCCCCACCTAAGATAGAA 57.869 47.619 0.00 0.00 0.00 2.10
57 58 3.460825 ACAGCCCCACCTAAGATAGAAA 58.539 45.455 0.00 0.00 0.00 2.52
58 59 3.200165 ACAGCCCCACCTAAGATAGAAAC 59.800 47.826 0.00 0.00 0.00 2.78
59 60 2.778270 AGCCCCACCTAAGATAGAAACC 59.222 50.000 0.00 0.00 0.00 3.27
60 61 2.508300 GCCCCACCTAAGATAGAAACCA 59.492 50.000 0.00 0.00 0.00 3.67
61 62 3.053917 GCCCCACCTAAGATAGAAACCAA 60.054 47.826 0.00 0.00 0.00 3.67
62 63 4.569015 GCCCCACCTAAGATAGAAACCAAA 60.569 45.833 0.00 0.00 0.00 3.28
63 64 5.766590 CCCCACCTAAGATAGAAACCAAAT 58.233 41.667 0.00 0.00 0.00 2.32
64 65 5.828328 CCCCACCTAAGATAGAAACCAAATC 59.172 44.000 0.00 0.00 0.00 2.17
65 66 6.423182 CCCACCTAAGATAGAAACCAAATCA 58.577 40.000 0.00 0.00 0.00 2.57
66 67 6.889722 CCCACCTAAGATAGAAACCAAATCAA 59.110 38.462 0.00 0.00 0.00 2.57
67 68 7.148069 CCCACCTAAGATAGAAACCAAATCAAC 60.148 40.741 0.00 0.00 0.00 3.18
68 69 7.611855 CCACCTAAGATAGAAACCAAATCAACT 59.388 37.037 0.00 0.00 0.00 3.16
69 70 9.667107 CACCTAAGATAGAAACCAAATCAACTA 57.333 33.333 0.00 0.00 0.00 2.24
70 71 9.892130 ACCTAAGATAGAAACCAAATCAACTAG 57.108 33.333 0.00 0.00 0.00 2.57
71 72 9.892130 CCTAAGATAGAAACCAAATCAACTAGT 57.108 33.333 0.00 0.00 0.00 2.57
77 78 7.653767 AGAAACCAAATCAACTAGTAAGTCG 57.346 36.000 0.00 0.00 33.75 4.18
78 79 5.857822 AACCAAATCAACTAGTAAGTCGC 57.142 39.130 0.00 0.00 33.75 5.19
79 80 5.148651 ACCAAATCAACTAGTAAGTCGCT 57.851 39.130 0.00 0.00 33.75 4.93
80 81 6.276832 ACCAAATCAACTAGTAAGTCGCTA 57.723 37.500 0.00 0.00 33.75 4.26
81 82 6.694447 ACCAAATCAACTAGTAAGTCGCTAA 58.306 36.000 0.00 0.00 33.75 3.09
82 83 6.589139 ACCAAATCAACTAGTAAGTCGCTAAC 59.411 38.462 0.00 0.00 33.75 2.34
83 84 6.588756 CCAAATCAACTAGTAAGTCGCTAACA 59.411 38.462 0.00 0.00 33.75 2.41
84 85 7.117236 CCAAATCAACTAGTAAGTCGCTAACAA 59.883 37.037 0.00 0.00 33.75 2.83
85 86 8.492748 CAAATCAACTAGTAAGTCGCTAACAAA 58.507 33.333 0.00 0.00 33.75 2.83
86 87 8.773404 AATCAACTAGTAAGTCGCTAACAAAT 57.227 30.769 0.00 0.00 33.75 2.32
87 88 8.773404 ATCAACTAGTAAGTCGCTAACAAATT 57.227 30.769 0.00 0.00 33.75 1.82
88 89 8.014322 TCAACTAGTAAGTCGCTAACAAATTG 57.986 34.615 0.00 0.00 33.75 2.32
89 90 6.963049 ACTAGTAAGTCGCTAACAAATTGG 57.037 37.500 0.00 0.00 0.00 3.16
90 91 5.873164 ACTAGTAAGTCGCTAACAAATTGGG 59.127 40.000 0.00 0.00 0.00 4.12
91 92 4.007659 AGTAAGTCGCTAACAAATTGGGG 58.992 43.478 0.00 0.00 0.00 4.96
92 93 2.579410 AGTCGCTAACAAATTGGGGT 57.421 45.000 0.00 0.00 31.95 4.95
93 94 2.871453 AGTCGCTAACAAATTGGGGTT 58.129 42.857 0.00 0.00 31.95 4.11
94 95 2.817844 AGTCGCTAACAAATTGGGGTTC 59.182 45.455 0.00 0.00 31.95 3.62
95 96 2.094906 GTCGCTAACAAATTGGGGTTCC 60.095 50.000 0.00 0.00 31.95 3.62
96 97 1.135517 CGCTAACAAATTGGGGTTCCG 60.136 52.381 0.00 0.00 35.24 4.30
97 98 2.164338 GCTAACAAATTGGGGTTCCGA 58.836 47.619 0.00 0.00 35.24 4.55
98 99 2.163613 GCTAACAAATTGGGGTTCCGAG 59.836 50.000 0.00 0.00 35.24 4.63
99 100 2.668144 AACAAATTGGGGTTCCGAGA 57.332 45.000 0.00 0.00 35.24 4.04
100 101 2.668144 ACAAATTGGGGTTCCGAGAA 57.332 45.000 0.00 0.00 35.24 2.87
101 102 2.235891 ACAAATTGGGGTTCCGAGAAC 58.764 47.619 0.00 7.90 35.24 3.01
102 103 2.235016 CAAATTGGGGTTCCGAGAACA 58.765 47.619 15.57 0.01 35.24 3.18
103 104 2.200373 AATTGGGGTTCCGAGAACAG 57.800 50.000 15.57 0.00 35.24 3.16
104 105 0.322546 ATTGGGGTTCCGAGAACAGC 60.323 55.000 15.57 3.09 35.24 4.40
105 106 2.046217 GGGGTTCCGAGAACAGCC 60.046 66.667 15.57 9.85 0.00 4.85
106 107 2.747686 GGGTTCCGAGAACAGCCA 59.252 61.111 15.57 0.00 0.00 4.75
107 108 1.072505 GGGTTCCGAGAACAGCCAA 59.927 57.895 15.57 0.00 0.00 4.52
108 109 0.322546 GGGTTCCGAGAACAGCCAAT 60.323 55.000 15.57 0.00 0.00 3.16
109 110 0.804989 GGTTCCGAGAACAGCCAATG 59.195 55.000 15.57 0.00 0.00 2.82
110 111 0.169009 GTTCCGAGAACAGCCAATGC 59.831 55.000 10.67 0.00 37.95 3.56
111 112 0.960364 TTCCGAGAACAGCCAATGCC 60.960 55.000 0.00 0.00 38.69 4.40
112 113 2.409870 CCGAGAACAGCCAATGCCC 61.410 63.158 0.00 0.00 38.69 5.36
113 114 1.377725 CGAGAACAGCCAATGCCCT 60.378 57.895 0.00 0.00 38.69 5.19
114 115 1.372087 CGAGAACAGCCAATGCCCTC 61.372 60.000 0.00 0.00 38.69 4.30
115 116 0.322816 GAGAACAGCCAATGCCCTCA 60.323 55.000 0.00 0.00 38.69 3.86
116 117 0.333993 AGAACAGCCAATGCCCTCAT 59.666 50.000 0.00 0.00 38.69 2.90
117 118 0.458669 GAACAGCCAATGCCCTCATG 59.541 55.000 0.00 0.00 38.69 3.07
118 119 0.040058 AACAGCCAATGCCCTCATGA 59.960 50.000 0.00 0.00 38.69 3.07
119 120 0.040058 ACAGCCAATGCCCTCATGAA 59.960 50.000 0.00 0.00 38.69 2.57
120 121 0.458669 CAGCCAATGCCCTCATGAAC 59.541 55.000 0.00 0.00 38.69 3.18
121 122 0.685458 AGCCAATGCCCTCATGAACC 60.685 55.000 0.00 0.00 38.69 3.62
122 123 0.971959 GCCAATGCCCTCATGAACCA 60.972 55.000 0.00 0.00 32.23 3.67
123 124 1.784358 CCAATGCCCTCATGAACCAT 58.216 50.000 0.00 0.00 32.23 3.55
124 125 1.684983 CCAATGCCCTCATGAACCATC 59.315 52.381 0.00 0.00 32.23 3.51
125 126 2.380941 CAATGCCCTCATGAACCATCA 58.619 47.619 0.00 0.00 40.57 3.07
126 127 2.062971 ATGCCCTCATGAACCATCAC 57.937 50.000 0.00 0.00 38.69 3.06
127 128 0.994247 TGCCCTCATGAACCATCACT 59.006 50.000 0.00 0.00 38.69 3.41
128 129 1.065199 TGCCCTCATGAACCATCACTC 60.065 52.381 0.00 0.00 38.69 3.51
129 130 1.945387 CCCTCATGAACCATCACTCG 58.055 55.000 0.00 0.00 38.69 4.18
130 131 1.473965 CCCTCATGAACCATCACTCGG 60.474 57.143 0.00 0.00 38.69 4.63
131 132 1.208052 CCTCATGAACCATCACTCGGT 59.792 52.381 0.00 0.00 38.69 4.69
132 133 2.544685 CTCATGAACCATCACTCGGTC 58.455 52.381 0.00 0.00 38.69 4.79
133 134 1.207089 TCATGAACCATCACTCGGTCC 59.793 52.381 0.00 0.00 38.69 4.46
134 135 1.208052 CATGAACCATCACTCGGTCCT 59.792 52.381 0.00 0.00 38.69 3.85
135 136 1.348064 TGAACCATCACTCGGTCCTT 58.652 50.000 0.00 0.00 34.99 3.36
136 137 1.001974 TGAACCATCACTCGGTCCTTG 59.998 52.381 0.00 0.00 34.99 3.61
137 138 0.321653 AACCATCACTCGGTCCTTGC 60.322 55.000 0.00 0.00 34.99 4.01
138 139 1.450312 CCATCACTCGGTCCTTGCC 60.450 63.158 0.00 0.00 0.00 4.52
139 140 1.599047 CATCACTCGGTCCTTGCCT 59.401 57.895 0.00 0.00 0.00 4.75
140 141 0.036010 CATCACTCGGTCCTTGCCTT 60.036 55.000 0.00 0.00 0.00 4.35
141 142 0.250513 ATCACTCGGTCCTTGCCTTC 59.749 55.000 0.00 0.00 0.00 3.46
142 143 0.832135 TCACTCGGTCCTTGCCTTCT 60.832 55.000 0.00 0.00 0.00 2.85
143 144 0.390472 CACTCGGTCCTTGCCTTCTC 60.390 60.000 0.00 0.00 0.00 2.87
144 145 0.543174 ACTCGGTCCTTGCCTTCTCT 60.543 55.000 0.00 0.00 0.00 3.10
145 146 0.610687 CTCGGTCCTTGCCTTCTCTT 59.389 55.000 0.00 0.00 0.00 2.85
146 147 1.825474 CTCGGTCCTTGCCTTCTCTTA 59.175 52.381 0.00 0.00 0.00 2.10
147 148 2.233922 CTCGGTCCTTGCCTTCTCTTAA 59.766 50.000 0.00 0.00 0.00 1.85
148 149 2.838202 TCGGTCCTTGCCTTCTCTTAAT 59.162 45.455 0.00 0.00 0.00 1.40
149 150 2.939103 CGGTCCTTGCCTTCTCTTAATG 59.061 50.000 0.00 0.00 0.00 1.90
150 151 3.619979 CGGTCCTTGCCTTCTCTTAATGT 60.620 47.826 0.00 0.00 0.00 2.71
151 152 4.336280 GGTCCTTGCCTTCTCTTAATGTT 58.664 43.478 0.00 0.00 0.00 2.71
152 153 4.767409 GGTCCTTGCCTTCTCTTAATGTTT 59.233 41.667 0.00 0.00 0.00 2.83
153 154 5.335976 GGTCCTTGCCTTCTCTTAATGTTTG 60.336 44.000 0.00 0.00 0.00 2.93
154 155 4.218417 TCCTTGCCTTCTCTTAATGTTTGC 59.782 41.667 0.00 0.00 0.00 3.68
155 156 3.829886 TGCCTTCTCTTAATGTTTGCG 57.170 42.857 0.00 0.00 0.00 4.85
156 157 2.487762 TGCCTTCTCTTAATGTTTGCGG 59.512 45.455 0.00 0.00 0.00 5.69
157 158 2.732282 GCCTTCTCTTAATGTTTGCGGC 60.732 50.000 0.00 0.00 0.00 6.53
158 159 2.159379 CCTTCTCTTAATGTTTGCGGCC 60.159 50.000 0.00 0.00 0.00 6.13
159 160 1.459450 TCTCTTAATGTTTGCGGCCC 58.541 50.000 0.00 0.00 0.00 5.80
160 161 0.098728 CTCTTAATGTTTGCGGCCCG 59.901 55.000 0.00 0.00 0.00 6.13
161 162 0.321741 TCTTAATGTTTGCGGCCCGA 60.322 50.000 7.68 0.00 0.00 5.14
162 163 0.098728 CTTAATGTTTGCGGCCCGAG 59.901 55.000 7.68 0.00 0.00 4.63
163 164 1.309499 TTAATGTTTGCGGCCCGAGG 61.309 55.000 7.68 0.00 0.00 4.63
164 165 2.186602 TAATGTTTGCGGCCCGAGGA 62.187 55.000 7.68 0.00 0.00 3.71
165 166 3.561120 ATGTTTGCGGCCCGAGGAA 62.561 57.895 7.68 0.00 0.00 3.36
166 167 3.431725 GTTTGCGGCCCGAGGAAG 61.432 66.667 7.68 0.00 0.00 3.46
167 168 3.948719 TTTGCGGCCCGAGGAAGT 61.949 61.111 7.68 0.00 0.00 3.01
168 169 3.894547 TTTGCGGCCCGAGGAAGTC 62.895 63.158 7.68 0.00 0.00 3.01
170 171 4.821589 GCGGCCCGAGGAAGTCTG 62.822 72.222 7.68 0.00 0.00 3.51
171 172 3.382832 CGGCCCGAGGAAGTCTGT 61.383 66.667 0.00 0.00 0.00 3.41
172 173 2.579738 GGCCCGAGGAAGTCTGTC 59.420 66.667 0.00 0.00 0.00 3.51
173 174 2.182030 GCCCGAGGAAGTCTGTCG 59.818 66.667 0.00 0.00 0.00 4.35
174 175 2.182030 CCCGAGGAAGTCTGTCGC 59.818 66.667 0.00 0.00 32.25 5.19
175 176 2.202492 CCGAGGAAGTCTGTCGCG 60.202 66.667 0.00 0.00 32.25 5.87
176 177 2.876645 CGAGGAAGTCTGTCGCGC 60.877 66.667 0.00 0.00 0.00 6.86
177 178 2.258591 GAGGAAGTCTGTCGCGCA 59.741 61.111 8.75 1.43 0.00 6.09
178 179 1.153745 GAGGAAGTCTGTCGCGCAT 60.154 57.895 8.75 0.00 0.00 4.73
179 180 0.100682 GAGGAAGTCTGTCGCGCATA 59.899 55.000 8.75 0.00 0.00 3.14
180 181 0.101399 AGGAAGTCTGTCGCGCATAG 59.899 55.000 8.75 1.71 0.00 2.23
181 182 1.483424 GGAAGTCTGTCGCGCATAGC 61.483 60.000 8.75 0.00 43.95 2.97
182 183 0.526524 GAAGTCTGTCGCGCATAGCT 60.527 55.000 8.75 0.00 45.59 3.32
183 184 0.108615 AAGTCTGTCGCGCATAGCTT 60.109 50.000 8.75 7.21 45.59 3.74
184 185 0.526524 AGTCTGTCGCGCATAGCTTC 60.527 55.000 8.75 0.00 45.59 3.86
185 186 1.586303 TCTGTCGCGCATAGCTTCG 60.586 57.895 8.75 0.00 45.59 3.79
186 187 3.202690 CTGTCGCGCATAGCTTCGC 62.203 63.158 8.75 14.92 46.98 4.70
190 191 3.195002 GCGCATAGCTTCGCCACA 61.195 61.111 0.30 0.00 45.01 4.17
191 192 2.749865 GCGCATAGCTTCGCCACAA 61.750 57.895 0.30 0.00 45.01 3.33
192 193 1.793581 CGCATAGCTTCGCCACAAA 59.206 52.632 0.00 0.00 0.00 2.83
193 194 0.247814 CGCATAGCTTCGCCACAAAG 60.248 55.000 0.00 0.00 0.00 2.77
194 195 1.086696 GCATAGCTTCGCCACAAAGA 58.913 50.000 0.00 0.00 0.00 2.52
195 196 1.468520 GCATAGCTTCGCCACAAAGAA 59.531 47.619 0.00 0.00 0.00 2.52
196 197 2.095263 GCATAGCTTCGCCACAAAGAAA 60.095 45.455 0.00 0.00 0.00 2.52
197 198 3.611530 GCATAGCTTCGCCACAAAGAAAA 60.612 43.478 0.00 0.00 0.00 2.29
198 199 2.492019 AGCTTCGCCACAAAGAAAAC 57.508 45.000 0.00 0.00 0.00 2.43
199 200 1.067060 AGCTTCGCCACAAAGAAAACC 59.933 47.619 0.00 0.00 0.00 3.27
200 201 1.067060 GCTTCGCCACAAAGAAAACCT 59.933 47.619 0.00 0.00 0.00 3.50
201 202 2.481276 GCTTCGCCACAAAGAAAACCTT 60.481 45.455 0.00 0.00 36.47 3.50
202 203 2.861462 TCGCCACAAAGAAAACCTTG 57.139 45.000 0.00 0.00 34.79 3.61
203 204 2.370349 TCGCCACAAAGAAAACCTTGA 58.630 42.857 0.00 0.00 34.79 3.02
204 205 2.098443 TCGCCACAAAGAAAACCTTGAC 59.902 45.455 0.00 0.00 34.79 3.18
205 206 2.798145 CGCCACAAAGAAAACCTTGACC 60.798 50.000 0.00 0.00 34.79 4.02
206 207 2.430694 GCCACAAAGAAAACCTTGACCT 59.569 45.455 0.00 0.00 34.79 3.85
207 208 3.118775 GCCACAAAGAAAACCTTGACCTT 60.119 43.478 0.00 0.00 34.79 3.50
208 209 4.682787 CCACAAAGAAAACCTTGACCTTC 58.317 43.478 0.00 0.00 34.79 3.46
209 210 4.159506 CCACAAAGAAAACCTTGACCTTCA 59.840 41.667 0.00 0.00 34.79 3.02
210 211 5.337169 CCACAAAGAAAACCTTGACCTTCAA 60.337 40.000 0.00 0.00 34.79 2.69
211 212 6.340522 CACAAAGAAAACCTTGACCTTCAAT 58.659 36.000 0.00 0.00 35.59 2.57
212 213 6.256321 CACAAAGAAAACCTTGACCTTCAATG 59.744 38.462 0.00 0.00 35.59 2.82
213 214 5.535753 AAGAAAACCTTGACCTTCAATGG 57.464 39.130 0.00 0.00 35.59 3.16
214 215 4.803452 AGAAAACCTTGACCTTCAATGGA 58.197 39.130 9.84 0.00 35.59 3.41
215 216 4.829492 AGAAAACCTTGACCTTCAATGGAG 59.171 41.667 9.84 0.00 35.59 3.86
216 217 3.884037 AACCTTGACCTTCAATGGAGT 57.116 42.857 9.84 0.00 35.59 3.85
217 218 3.884037 ACCTTGACCTTCAATGGAGTT 57.116 42.857 9.84 0.00 35.59 3.01
218 219 3.490348 ACCTTGACCTTCAATGGAGTTG 58.510 45.455 9.84 0.00 35.59 3.16
219 220 2.229784 CCTTGACCTTCAATGGAGTTGC 59.770 50.000 0.00 0.00 35.59 4.17
220 221 2.957402 TGACCTTCAATGGAGTTGCT 57.043 45.000 0.00 0.00 37.74 3.91
221 222 2.507484 TGACCTTCAATGGAGTTGCTG 58.493 47.619 0.00 0.00 37.74 4.41
222 223 1.200948 GACCTTCAATGGAGTTGCTGC 59.799 52.381 0.00 0.00 37.74 5.25
223 224 1.202976 ACCTTCAATGGAGTTGCTGCT 60.203 47.619 0.00 0.00 37.74 4.24
224 225 1.471684 CCTTCAATGGAGTTGCTGCTC 59.528 52.381 0.00 0.40 37.74 4.26
225 226 2.434428 CTTCAATGGAGTTGCTGCTCT 58.566 47.619 0.00 0.00 37.74 4.09
226 227 2.105006 TCAATGGAGTTGCTGCTCTC 57.895 50.000 13.84 13.84 37.74 3.20
227 228 1.348696 TCAATGGAGTTGCTGCTCTCA 59.651 47.619 20.16 11.16 37.74 3.27
228 229 2.156917 CAATGGAGTTGCTGCTCTCAA 58.843 47.619 20.16 13.43 35.89 3.02
229 230 2.555325 CAATGGAGTTGCTGCTCTCAAA 59.445 45.455 20.16 12.06 35.89 2.69
230 231 2.346766 TGGAGTTGCTGCTCTCAAAA 57.653 45.000 20.16 8.27 35.89 2.44
231 232 2.224606 TGGAGTTGCTGCTCTCAAAAG 58.775 47.619 20.16 0.00 35.89 2.27
232 233 2.158769 TGGAGTTGCTGCTCTCAAAAGA 60.159 45.455 20.16 0.00 35.89 2.52
233 234 2.880890 GGAGTTGCTGCTCTCAAAAGAA 59.119 45.455 20.16 0.00 35.89 2.52
234 235 3.316308 GGAGTTGCTGCTCTCAAAAGAAA 59.684 43.478 20.16 0.00 35.89 2.52
235 236 4.022503 GGAGTTGCTGCTCTCAAAAGAAAT 60.023 41.667 20.16 0.00 35.89 2.17
236 237 5.508657 GGAGTTGCTGCTCTCAAAAGAAATT 60.509 40.000 20.16 0.00 35.89 1.82
237 238 5.910614 AGTTGCTGCTCTCAAAAGAAATTT 58.089 33.333 0.00 0.00 0.00 1.82
238 239 8.887171 GGAGTTGCTGCTCTCAAAAGAAATTTG 61.887 40.741 20.16 0.00 39.66 2.32
239 240 4.624015 TGCTGCTCTCAAAAGAAATTTGG 58.376 39.130 0.00 0.00 46.85 3.28
240 241 3.431233 GCTGCTCTCAAAAGAAATTTGGC 59.569 43.478 0.00 0.00 46.85 4.52
241 242 4.624015 CTGCTCTCAAAAGAAATTTGGCA 58.376 39.130 0.00 3.07 46.85 4.92
242 243 4.370917 TGCTCTCAAAAGAAATTTGGCAC 58.629 39.130 0.00 0.00 46.85 5.01
243 244 3.426525 GCTCTCAAAAGAAATTTGGCACG 59.573 43.478 0.00 0.00 46.85 5.34
244 245 3.976169 TCTCAAAAGAAATTTGGCACGG 58.024 40.909 0.00 0.00 46.85 4.94
245 246 2.476241 CTCAAAAGAAATTTGGCACGGC 59.524 45.455 0.00 0.00 46.85 5.68
246 247 1.192090 CAAAAGAAATTTGGCACGGCG 59.808 47.619 4.80 4.80 43.85 6.46
247 248 0.671251 AAAGAAATTTGGCACGGCGA 59.329 45.000 16.62 0.00 0.00 5.54
248 249 0.671251 AAGAAATTTGGCACGGCGAA 59.329 45.000 16.62 0.00 0.00 4.70
249 250 0.671251 AGAAATTTGGCACGGCGAAA 59.329 45.000 16.62 3.46 40.15 3.46
250 251 1.067821 AGAAATTTGGCACGGCGAAAA 59.932 42.857 16.62 9.03 39.41 2.29
251 252 1.191425 GAAATTTGGCACGGCGAAAAC 59.809 47.619 16.62 0.78 39.41 2.43
252 253 0.387565 AATTTGGCACGGCGAAAACT 59.612 45.000 16.62 0.00 39.41 2.66
253 254 1.240256 ATTTGGCACGGCGAAAACTA 58.760 45.000 16.62 0.00 39.41 2.24
254 255 0.589223 TTTGGCACGGCGAAAACTAG 59.411 50.000 16.62 0.00 33.70 2.57
255 256 1.231958 TTGGCACGGCGAAAACTAGG 61.232 55.000 16.62 0.00 0.00 3.02
256 257 1.670083 GGCACGGCGAAAACTAGGT 60.670 57.895 16.62 0.00 0.00 3.08
257 258 0.390209 GGCACGGCGAAAACTAGGTA 60.390 55.000 16.62 0.00 0.00 3.08
258 259 1.648504 GCACGGCGAAAACTAGGTAT 58.351 50.000 16.62 0.00 0.00 2.73
259 260 2.481795 GGCACGGCGAAAACTAGGTATA 60.482 50.000 16.62 0.00 0.00 1.47
260 261 3.189285 GCACGGCGAAAACTAGGTATAA 58.811 45.455 16.62 0.00 0.00 0.98
261 262 3.000623 GCACGGCGAAAACTAGGTATAAC 59.999 47.826 16.62 0.00 0.00 1.89
262 263 4.175516 CACGGCGAAAACTAGGTATAACA 58.824 43.478 16.62 0.00 0.00 2.41
263 264 4.266976 CACGGCGAAAACTAGGTATAACAG 59.733 45.833 16.62 0.00 0.00 3.16
264 265 3.800506 CGGCGAAAACTAGGTATAACAGG 59.199 47.826 0.00 0.00 0.00 4.00
265 266 4.440525 CGGCGAAAACTAGGTATAACAGGA 60.441 45.833 0.00 0.00 0.00 3.86
266 267 5.608449 GGCGAAAACTAGGTATAACAGGAT 58.392 41.667 0.00 0.00 0.00 3.24
267 268 6.053650 GGCGAAAACTAGGTATAACAGGATT 58.946 40.000 0.00 0.00 0.00 3.01
268 269 6.541278 GGCGAAAACTAGGTATAACAGGATTT 59.459 38.462 0.00 0.00 0.00 2.17
269 270 7.407337 GCGAAAACTAGGTATAACAGGATTTG 58.593 38.462 0.00 0.00 0.00 2.32
270 271 7.279313 GCGAAAACTAGGTATAACAGGATTTGA 59.721 37.037 0.00 0.00 0.00 2.69
271 272 8.601476 CGAAAACTAGGTATAACAGGATTTGAC 58.399 37.037 0.00 0.00 0.00 3.18
272 273 9.668497 GAAAACTAGGTATAACAGGATTTGACT 57.332 33.333 0.00 0.00 0.00 3.41
273 274 9.449719 AAAACTAGGTATAACAGGATTTGACTG 57.550 33.333 0.00 0.00 41.64 3.51
274 275 7.973048 ACTAGGTATAACAGGATTTGACTGA 57.027 36.000 0.00 0.00 39.24 3.41
275 276 8.375493 ACTAGGTATAACAGGATTTGACTGAA 57.625 34.615 0.00 0.00 39.24 3.02
276 277 8.822805 ACTAGGTATAACAGGATTTGACTGAAA 58.177 33.333 0.00 0.00 39.24 2.69
277 278 9.667107 CTAGGTATAACAGGATTTGACTGAAAA 57.333 33.333 0.00 0.00 39.24 2.29
278 279 8.336801 AGGTATAACAGGATTTGACTGAAAAC 57.663 34.615 0.00 0.00 39.24 2.43
279 280 8.164070 AGGTATAACAGGATTTGACTGAAAACT 58.836 33.333 0.00 0.00 39.24 2.66
280 281 8.451748 GGTATAACAGGATTTGACTGAAAACTC 58.548 37.037 0.00 0.00 39.24 3.01
281 282 9.220767 GTATAACAGGATTTGACTGAAAACTCT 57.779 33.333 0.00 0.00 39.24 3.24
282 283 8.697507 ATAACAGGATTTGACTGAAAACTCTT 57.302 30.769 0.00 0.00 39.24 2.85
283 284 7.410120 AACAGGATTTGACTGAAAACTCTTT 57.590 32.000 0.00 0.00 39.24 2.52
284 285 6.799512 ACAGGATTTGACTGAAAACTCTTTG 58.200 36.000 0.00 0.00 39.24 2.77
285 286 6.603201 ACAGGATTTGACTGAAAACTCTTTGA 59.397 34.615 0.00 0.00 39.24 2.69
286 287 7.122650 ACAGGATTTGACTGAAAACTCTTTGAA 59.877 33.333 0.00 0.00 39.24 2.69
287 288 8.139989 CAGGATTTGACTGAAAACTCTTTGAAT 58.860 33.333 0.00 0.00 38.20 2.57
288 289 8.699130 AGGATTTGACTGAAAACTCTTTGAATT 58.301 29.630 0.00 0.00 0.00 2.17
289 290 8.758715 GGATTTGACTGAAAACTCTTTGAATTG 58.241 33.333 0.00 0.00 0.00 2.32
290 291 9.520204 GATTTGACTGAAAACTCTTTGAATTGA 57.480 29.630 0.00 0.00 0.00 2.57
291 292 8.687824 TTTGACTGAAAACTCTTTGAATTGAC 57.312 30.769 0.00 0.00 0.00 3.18
292 293 6.486248 TGACTGAAAACTCTTTGAATTGACG 58.514 36.000 0.00 0.00 0.00 4.35
293 294 6.315144 TGACTGAAAACTCTTTGAATTGACGA 59.685 34.615 0.00 0.00 0.00 4.20
294 295 7.012327 TGACTGAAAACTCTTTGAATTGACGAT 59.988 33.333 0.00 0.00 0.00 3.73
295 296 7.134815 ACTGAAAACTCTTTGAATTGACGATG 58.865 34.615 0.00 0.00 0.00 3.84
296 297 7.012327 ACTGAAAACTCTTTGAATTGACGATGA 59.988 33.333 0.00 0.00 0.00 2.92
297 298 7.702386 TGAAAACTCTTTGAATTGACGATGAA 58.298 30.769 0.00 0.00 0.00 2.57
298 299 8.187480 TGAAAACTCTTTGAATTGACGATGAAA 58.813 29.630 0.00 0.00 0.00 2.69
299 300 8.925161 AAAACTCTTTGAATTGACGATGAAAA 57.075 26.923 0.00 0.00 0.00 2.29
300 301 8.925161 AAACTCTTTGAATTGACGATGAAAAA 57.075 26.923 0.00 0.00 0.00 1.94
318 319 1.534729 AAAGTCCCACGATTGAAGGC 58.465 50.000 0.00 0.00 0.00 4.35
319 320 0.673644 AAGTCCCACGATTGAAGGCG 60.674 55.000 0.00 0.00 0.00 5.52
320 321 1.375523 GTCCCACGATTGAAGGCGT 60.376 57.895 0.00 0.00 42.11 5.68
321 322 0.108520 GTCCCACGATTGAAGGCGTA 60.109 55.000 0.00 0.00 38.92 4.42
322 323 0.828022 TCCCACGATTGAAGGCGTAT 59.172 50.000 0.00 0.00 38.92 3.06
323 324 1.202486 TCCCACGATTGAAGGCGTATC 60.202 52.381 0.00 0.00 38.92 2.24
324 325 1.217882 CCACGATTGAAGGCGTATCC 58.782 55.000 0.00 0.00 38.92 2.59
325 326 0.852777 CACGATTGAAGGCGTATCCG 59.147 55.000 0.00 0.00 38.92 4.18
326 327 0.249322 ACGATTGAAGGCGTATCCGG 60.249 55.000 0.00 0.00 39.21 5.14
327 328 0.249322 CGATTGAAGGCGTATCCGGT 60.249 55.000 0.00 0.00 40.77 5.28
328 329 1.805120 CGATTGAAGGCGTATCCGGTT 60.805 52.381 0.00 0.00 40.77 4.44
329 330 1.865340 GATTGAAGGCGTATCCGGTTC 59.135 52.381 0.00 0.00 40.77 3.62
330 331 0.609151 TTGAAGGCGTATCCGGTTCA 59.391 50.000 0.00 0.00 40.77 3.18
331 332 0.609151 TGAAGGCGTATCCGGTTCAA 59.391 50.000 0.00 0.00 40.77 2.69
332 333 1.002201 TGAAGGCGTATCCGGTTCAAA 59.998 47.619 0.00 0.00 40.77 2.69
333 334 1.395954 GAAGGCGTATCCGGTTCAAAC 59.604 52.381 0.00 0.00 40.77 2.93
334 335 0.392060 AGGCGTATCCGGTTCAAACC 60.392 55.000 0.00 1.61 45.76 3.27
342 343 3.785982 GGTTCAAACCGGGCCAAT 58.214 55.556 6.32 0.00 39.66 3.16
343 344 2.054458 GGTTCAAACCGGGCCAATT 58.946 52.632 6.32 0.00 39.66 2.32
344 345 0.037697 GGTTCAAACCGGGCCAATTC 60.038 55.000 6.32 0.00 39.66 2.17
345 346 0.966179 GTTCAAACCGGGCCAATTCT 59.034 50.000 6.32 0.00 0.00 2.40
346 347 0.965439 TTCAAACCGGGCCAATTCTG 59.035 50.000 6.32 0.00 0.00 3.02
347 348 1.079888 CAAACCGGGCCAATTCTGC 60.080 57.895 6.32 0.00 0.00 4.26
348 349 2.635443 AAACCGGGCCAATTCTGCG 61.635 57.895 6.32 0.00 0.00 5.18
349 350 3.561120 AACCGGGCCAATTCTGCGA 62.561 57.895 6.32 0.00 0.00 5.10
350 351 3.204827 CCGGGCCAATTCTGCGAG 61.205 66.667 4.39 0.00 0.00 5.03
351 352 2.436646 CGGGCCAATTCTGCGAGT 60.437 61.111 4.39 0.00 0.00 4.18
352 353 2.464459 CGGGCCAATTCTGCGAGTC 61.464 63.158 4.39 0.00 0.00 3.36
353 354 1.377202 GGGCCAATTCTGCGAGTCA 60.377 57.895 4.39 0.00 0.00 3.41
354 355 1.372087 GGGCCAATTCTGCGAGTCAG 61.372 60.000 4.39 0.00 44.21 3.51
355 356 1.372087 GGCCAATTCTGCGAGTCAGG 61.372 60.000 0.00 0.00 43.06 3.86
356 357 1.986575 GCCAATTCTGCGAGTCAGGC 61.987 60.000 0.00 0.00 43.06 4.85
357 358 1.372087 CCAATTCTGCGAGTCAGGCC 61.372 60.000 0.00 0.00 43.06 5.19
358 359 1.078143 AATTCTGCGAGTCAGGCCC 60.078 57.895 0.00 0.00 43.06 5.80
359 360 1.841302 AATTCTGCGAGTCAGGCCCA 61.841 55.000 0.00 0.00 43.06 5.36
360 361 2.249413 ATTCTGCGAGTCAGGCCCAG 62.249 60.000 0.00 0.00 43.06 4.45
361 362 3.385384 CTGCGAGTCAGGCCCAGA 61.385 66.667 0.00 0.00 39.15 3.86
406 408 3.861263 GAAACGGCGGCGTGATCC 61.861 66.667 38.07 21.62 0.00 3.36
418 420 3.315191 CGGCGTGATCCCATCTTTTATTT 59.685 43.478 0.00 0.00 0.00 1.40
419 421 4.554723 CGGCGTGATCCCATCTTTTATTTC 60.555 45.833 0.00 0.00 0.00 2.17
491 510 1.382009 GTGAGTCTCCCCTCCCCTC 60.382 68.421 0.00 0.00 0.00 4.30
492 511 2.284151 GAGTCTCCCCTCCCCTCC 59.716 72.222 0.00 0.00 0.00 4.30
493 512 3.369388 AGTCTCCCCTCCCCTCCC 61.369 72.222 0.00 0.00 0.00 4.30
494 513 4.500826 GTCTCCCCTCCCCTCCCC 62.501 77.778 0.00 0.00 0.00 4.81
495 514 4.761304 TCTCCCCTCCCCTCCCCT 62.761 72.222 0.00 0.00 0.00 4.79
496 515 4.179599 CTCCCCTCCCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
501 520 4.179599 CTCCCCTCCCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
638 662 1.885887 TGCAAGGGAAAACTCCAATCG 59.114 47.619 0.00 0.00 0.00 3.34
639 663 1.886542 GCAAGGGAAAACTCCAATCGT 59.113 47.619 0.00 0.00 0.00 3.73
666 715 2.548057 TGAAATTCAGTCCAGCACGAAC 59.452 45.455 0.00 0.00 0.00 3.95
688 741 4.547367 GGCGGCGCCCTATGACTT 62.547 66.667 39.67 0.00 44.06 3.01
700 753 3.704566 CCCTATGACTTGGTAGCAGTACA 59.295 47.826 0.00 0.00 0.00 2.90
701 754 4.345257 CCCTATGACTTGGTAGCAGTACAT 59.655 45.833 0.00 11.99 0.00 2.29
706 875 4.225042 TGACTTGGTAGCAGTACATCCATT 59.775 41.667 0.00 0.00 0.00 3.16
718 890 8.253113 AGCAGTACATCCATTTCTTTTATTTGG 58.747 33.333 0.00 0.00 0.00 3.28
805 989 9.978044 GTAGTCATATAAAGAGGGATAACGTTT 57.022 33.333 5.91 0.00 0.00 3.60
806 990 8.888579 AGTCATATAAAGAGGGATAACGTTTG 57.111 34.615 5.91 0.00 0.00 2.93
807 991 8.701895 AGTCATATAAAGAGGGATAACGTTTGA 58.298 33.333 5.91 0.00 0.00 2.69
809 993 8.920174 TCATATAAAGAGGGATAACGTTTGAGA 58.080 33.333 5.91 0.00 0.00 3.27
810 994 9.197694 CATATAAAGAGGGATAACGTTTGAGAG 57.802 37.037 5.91 0.00 0.00 3.20
811 995 3.528597 AGAGGGATAACGTTTGAGAGC 57.471 47.619 5.91 0.00 0.00 4.09
812 996 2.832129 AGAGGGATAACGTTTGAGAGCA 59.168 45.455 5.91 0.00 0.00 4.26
813 997 3.452627 AGAGGGATAACGTTTGAGAGCAT 59.547 43.478 5.91 0.00 0.00 3.79
831 1017 2.551459 GCATATGGCGATTTCTTCAGCT 59.449 45.455 4.56 0.00 0.00 4.24
832 1018 3.364764 GCATATGGCGATTTCTTCAGCTC 60.365 47.826 4.56 0.00 0.00 4.09
833 1019 1.673168 ATGGCGATTTCTTCAGCTCC 58.327 50.000 0.00 0.00 0.00 4.70
865 1051 6.455360 TGATCCCATGATGTTTAAAAGCTC 57.545 37.500 0.00 0.00 0.00 4.09
867 1053 4.934356 TCCCATGATGTTTAAAAGCTCCT 58.066 39.130 0.00 0.00 0.00 3.69
948 1135 0.868406 CTTGCCAGTCCGTGAAACTC 59.132 55.000 0.00 0.00 31.75 3.01
993 1180 0.389166 CTCTCACTGTGGCTTCGACC 60.389 60.000 8.11 0.00 0.00 4.79
1051 1238 2.796651 CCAGCTTGCCGCAAGATC 59.203 61.111 32.61 17.84 43.42 2.75
1059 1246 0.249197 TGCCGCAAGATCTCATCGAG 60.249 55.000 11.31 0.00 43.02 4.04
1087 1274 1.739562 GTGAGGCTTCCAGTGAGCG 60.740 63.158 0.00 0.00 41.03 5.03
1102 1289 2.186384 GCGATCTGCTGAGGTGCT 59.814 61.111 0.00 0.00 41.73 4.40
1106 1293 0.743701 GATCTGCTGAGGTGCTGTGG 60.744 60.000 0.00 0.00 34.27 4.17
1299 1486 0.107703 TGCCCGTGATTGATCCTGAC 60.108 55.000 0.00 0.00 0.00 3.51
1426 1613 3.025866 GTCAAGTACGCGACGGAAT 57.974 52.632 15.93 0.00 0.00 3.01
1512 1705 3.801997 CCGGGCCAGAAGCTCCAT 61.802 66.667 4.39 0.00 39.69 3.41
1726 1919 8.530804 TGATCTCAGAGATGAATGTCTAGAAA 57.469 34.615 18.22 0.00 34.53 2.52
1794 1987 2.232941 TCCGTTCTGTTACTGGATCACC 59.767 50.000 0.00 0.00 0.00 4.02
1964 2160 1.478916 TGGACCGCATTTCATCTACGA 59.521 47.619 0.00 0.00 0.00 3.43
2042 2238 2.190161 CCAGCGATTTACGATTGACGA 58.810 47.619 0.00 0.00 45.77 4.20
2043 2239 2.794910 CCAGCGATTTACGATTGACGAT 59.205 45.455 0.00 0.00 45.77 3.73
2069 2265 5.335191 CCAAGTTGGTGAAGCTGTTAGATTC 60.335 44.000 14.21 0.20 40.77 2.52
2301 2500 6.439636 TGATAGCTGCACTTCCCTTATTAT 57.560 37.500 1.02 0.00 0.00 1.28
2302 2501 6.841601 TGATAGCTGCACTTCCCTTATTATT 58.158 36.000 1.02 0.00 0.00 1.40
2303 2502 7.973402 TGATAGCTGCACTTCCCTTATTATTA 58.027 34.615 1.02 0.00 0.00 0.98
2763 2998 1.540267 TGACGCCTTCAGTAGTGAGAC 59.460 52.381 0.00 0.00 32.98 3.36
2951 3188 3.746045 TGGGACTCACTCTTGTAACAC 57.254 47.619 0.00 0.00 0.00 3.32
3201 3511 8.139989 AGATCAGCATTTGCATACCTATTTTTC 58.860 33.333 5.20 0.00 45.16 2.29
3391 3728 8.647796 CCACCACCATATTAACAGAGAAGTATA 58.352 37.037 0.00 0.00 0.00 1.47
3498 3835 6.321435 CCACTAAAAGAATATGAGGTTTCCCC 59.679 42.308 0.00 0.00 0.00 4.81
3542 3879 4.943093 TGGATACTAGTAAGTGTGCACGTA 59.057 41.667 13.13 5.91 39.63 3.57
3602 3939 0.664224 CATGCAACATATGGCAGCGA 59.336 50.000 7.80 0.42 44.24 4.93
3603 3940 1.268625 CATGCAACATATGGCAGCGAT 59.731 47.619 7.80 0.00 44.24 4.58
3604 3941 1.391577 TGCAACATATGGCAGCGATT 58.608 45.000 7.80 0.00 34.58 3.34
3605 3942 1.750206 TGCAACATATGGCAGCGATTT 59.250 42.857 7.80 0.00 34.58 2.17
3606 3943 2.166050 TGCAACATATGGCAGCGATTTT 59.834 40.909 7.80 0.00 34.58 1.82
3656 3995 1.843851 GAGTTGGGGGATGATGGTGTA 59.156 52.381 0.00 0.00 0.00 2.90
3735 4074 7.894376 ACTATGACAATTTTGCAAAAGGATG 57.106 32.000 27.08 24.73 0.00 3.51
3894 4406 1.805943 CACGTGCATCTTGATGTTCCA 59.194 47.619 0.82 0.03 0.00 3.53
4239 5298 4.730966 TGCCAATGACCCTTAACACTTTA 58.269 39.130 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.269453 TGTTTTGTTTGATGATGATTTGCAATA 57.731 25.926 0.00 0.00 0.00 1.90
13 14 8.155821 TGTTTTGTTTGATGATGATTTGCAAT 57.844 26.923 0.00 0.00 0.00 3.56
14 15 7.549615 TGTTTTGTTTGATGATGATTTGCAA 57.450 28.000 0.00 0.00 0.00 4.08
15 16 6.292973 GCTGTTTTGTTTGATGATGATTTGCA 60.293 34.615 0.00 0.00 0.00 4.08
17 18 6.347888 GGGCTGTTTTGTTTGATGATGATTTG 60.348 38.462 0.00 0.00 0.00 2.32
18 19 5.702209 GGGCTGTTTTGTTTGATGATGATTT 59.298 36.000 0.00 0.00 0.00 2.17
19 20 5.240121 GGGCTGTTTTGTTTGATGATGATT 58.760 37.500 0.00 0.00 0.00 2.57
20 21 4.322953 GGGGCTGTTTTGTTTGATGATGAT 60.323 41.667 0.00 0.00 0.00 2.45
21 22 3.006752 GGGGCTGTTTTGTTTGATGATGA 59.993 43.478 0.00 0.00 0.00 2.92
22 23 3.244146 TGGGGCTGTTTTGTTTGATGATG 60.244 43.478 0.00 0.00 0.00 3.07
23 24 2.971330 TGGGGCTGTTTTGTTTGATGAT 59.029 40.909 0.00 0.00 0.00 2.45
24 25 2.102252 GTGGGGCTGTTTTGTTTGATGA 59.898 45.455 0.00 0.00 0.00 2.92
25 26 2.482864 GTGGGGCTGTTTTGTTTGATG 58.517 47.619 0.00 0.00 0.00 3.07
26 27 1.416030 GGTGGGGCTGTTTTGTTTGAT 59.584 47.619 0.00 0.00 0.00 2.57
27 28 0.827368 GGTGGGGCTGTTTTGTTTGA 59.173 50.000 0.00 0.00 0.00 2.69
28 29 0.829990 AGGTGGGGCTGTTTTGTTTG 59.170 50.000 0.00 0.00 0.00 2.93
29 30 2.463047 TAGGTGGGGCTGTTTTGTTT 57.537 45.000 0.00 0.00 0.00 2.83
30 31 2.091555 TCTTAGGTGGGGCTGTTTTGTT 60.092 45.455 0.00 0.00 0.00 2.83
31 32 1.497286 TCTTAGGTGGGGCTGTTTTGT 59.503 47.619 0.00 0.00 0.00 2.83
32 33 2.286365 TCTTAGGTGGGGCTGTTTTG 57.714 50.000 0.00 0.00 0.00 2.44
33 34 3.850173 TCTATCTTAGGTGGGGCTGTTTT 59.150 43.478 0.00 0.00 0.00 2.43
34 35 3.460825 TCTATCTTAGGTGGGGCTGTTT 58.539 45.455 0.00 0.00 0.00 2.83
35 36 3.130734 TCTATCTTAGGTGGGGCTGTT 57.869 47.619 0.00 0.00 0.00 3.16
36 37 2.868964 TCTATCTTAGGTGGGGCTGT 57.131 50.000 0.00 0.00 0.00 4.40
37 38 3.433740 GGTTTCTATCTTAGGTGGGGCTG 60.434 52.174 0.00 0.00 0.00 4.85
38 39 2.778270 GGTTTCTATCTTAGGTGGGGCT 59.222 50.000 0.00 0.00 0.00 5.19
39 40 2.508300 TGGTTTCTATCTTAGGTGGGGC 59.492 50.000 0.00 0.00 0.00 5.80
40 41 4.855298 TTGGTTTCTATCTTAGGTGGGG 57.145 45.455 0.00 0.00 0.00 4.96
41 42 6.423182 TGATTTGGTTTCTATCTTAGGTGGG 58.577 40.000 0.00 0.00 0.00 4.61
42 43 7.611855 AGTTGATTTGGTTTCTATCTTAGGTGG 59.388 37.037 0.00 0.00 0.00 4.61
43 44 8.567285 AGTTGATTTGGTTTCTATCTTAGGTG 57.433 34.615 0.00 0.00 0.00 4.00
44 45 9.892130 CTAGTTGATTTGGTTTCTATCTTAGGT 57.108 33.333 0.00 0.00 0.00 3.08
45 46 9.892130 ACTAGTTGATTTGGTTTCTATCTTAGG 57.108 33.333 0.00 0.00 0.00 2.69
51 52 9.367444 CGACTTACTAGTTGATTTGGTTTCTAT 57.633 33.333 0.00 0.00 37.92 1.98
52 53 7.330208 GCGACTTACTAGTTGATTTGGTTTCTA 59.670 37.037 0.00 0.00 37.92 2.10
53 54 6.147328 GCGACTTACTAGTTGATTTGGTTTCT 59.853 38.462 0.00 0.00 37.92 2.52
54 55 6.147328 AGCGACTTACTAGTTGATTTGGTTTC 59.853 38.462 0.00 0.00 37.92 2.78
55 56 5.995897 AGCGACTTACTAGTTGATTTGGTTT 59.004 36.000 0.00 0.00 37.92 3.27
56 57 5.548406 AGCGACTTACTAGTTGATTTGGTT 58.452 37.500 0.00 0.00 37.92 3.67
57 58 5.148651 AGCGACTTACTAGTTGATTTGGT 57.851 39.130 0.00 0.00 37.92 3.67
58 59 6.588756 TGTTAGCGACTTACTAGTTGATTTGG 59.411 38.462 0.00 0.00 37.92 3.28
59 60 7.576750 TGTTAGCGACTTACTAGTTGATTTG 57.423 36.000 0.00 0.00 37.92 2.32
60 61 8.597662 TTTGTTAGCGACTTACTAGTTGATTT 57.402 30.769 0.00 0.00 37.92 2.17
61 62 8.773404 ATTTGTTAGCGACTTACTAGTTGATT 57.227 30.769 0.00 0.00 37.92 2.57
62 63 8.656849 CAATTTGTTAGCGACTTACTAGTTGAT 58.343 33.333 0.00 0.00 37.92 2.57
63 64 7.117236 CCAATTTGTTAGCGACTTACTAGTTGA 59.883 37.037 0.00 0.00 37.92 3.18
64 65 7.234384 CCAATTTGTTAGCGACTTACTAGTTG 58.766 38.462 0.00 0.00 38.60 3.16
65 66 6.370718 CCCAATTTGTTAGCGACTTACTAGTT 59.629 38.462 0.00 0.00 33.84 2.24
66 67 5.873164 CCCAATTTGTTAGCGACTTACTAGT 59.127 40.000 0.00 0.00 37.31 2.57
67 68 5.293569 CCCCAATTTGTTAGCGACTTACTAG 59.706 44.000 0.00 0.00 0.00 2.57
68 69 5.180271 CCCCAATTTGTTAGCGACTTACTA 58.820 41.667 0.00 0.00 0.00 1.82
69 70 4.007659 CCCCAATTTGTTAGCGACTTACT 58.992 43.478 0.00 0.00 0.00 2.24
70 71 3.754850 ACCCCAATTTGTTAGCGACTTAC 59.245 43.478 0.00 0.00 0.00 2.34
71 72 4.023726 ACCCCAATTTGTTAGCGACTTA 57.976 40.909 0.00 0.00 0.00 2.24
72 73 2.871453 ACCCCAATTTGTTAGCGACTT 58.129 42.857 0.00 0.00 0.00 3.01
73 74 2.579410 ACCCCAATTTGTTAGCGACT 57.421 45.000 0.00 0.00 0.00 4.18
74 75 2.094906 GGAACCCCAATTTGTTAGCGAC 60.095 50.000 0.00 0.00 0.00 5.19
75 76 2.164338 GGAACCCCAATTTGTTAGCGA 58.836 47.619 0.00 0.00 0.00 4.93
76 77 1.135517 CGGAACCCCAATTTGTTAGCG 60.136 52.381 0.00 0.00 0.00 4.26
77 78 2.163613 CTCGGAACCCCAATTTGTTAGC 59.836 50.000 0.00 0.00 0.00 3.09
78 79 3.681593 TCTCGGAACCCCAATTTGTTAG 58.318 45.455 0.00 0.00 0.00 2.34
79 80 3.791953 TCTCGGAACCCCAATTTGTTA 57.208 42.857 0.00 0.00 0.00 2.41
80 81 2.626266 GTTCTCGGAACCCCAATTTGTT 59.374 45.455 5.71 0.00 0.00 2.83
81 82 2.235891 GTTCTCGGAACCCCAATTTGT 58.764 47.619 5.71 0.00 0.00 2.83
82 83 2.228822 CTGTTCTCGGAACCCCAATTTG 59.771 50.000 12.35 0.00 0.00 2.32
83 84 2.514803 CTGTTCTCGGAACCCCAATTT 58.485 47.619 12.35 0.00 0.00 1.82
84 85 1.886655 GCTGTTCTCGGAACCCCAATT 60.887 52.381 12.35 0.00 0.00 2.32
85 86 0.322546 GCTGTTCTCGGAACCCCAAT 60.323 55.000 12.35 0.00 0.00 3.16
86 87 1.072505 GCTGTTCTCGGAACCCCAA 59.927 57.895 12.35 0.00 0.00 4.12
87 88 2.747686 GCTGTTCTCGGAACCCCA 59.252 61.111 12.35 0.00 0.00 4.96
88 89 2.046217 GGCTGTTCTCGGAACCCC 60.046 66.667 12.35 9.64 0.00 4.95
89 90 0.322546 ATTGGCTGTTCTCGGAACCC 60.323 55.000 12.35 8.77 0.00 4.11
90 91 0.804989 CATTGGCTGTTCTCGGAACC 59.195 55.000 12.35 1.26 0.00 3.62
91 92 0.169009 GCATTGGCTGTTCTCGGAAC 59.831 55.000 9.13 9.13 36.96 3.62
92 93 0.960364 GGCATTGGCTGTTCTCGGAA 60.960 55.000 2.42 0.00 40.87 4.30
93 94 1.377202 GGCATTGGCTGTTCTCGGA 60.377 57.895 2.42 0.00 40.87 4.55
94 95 2.409870 GGGCATTGGCTGTTCTCGG 61.410 63.158 10.31 0.00 40.87 4.63
95 96 1.372087 GAGGGCATTGGCTGTTCTCG 61.372 60.000 10.31 0.00 40.87 4.04
96 97 0.322816 TGAGGGCATTGGCTGTTCTC 60.323 55.000 10.31 8.45 40.87 2.87
97 98 0.333993 ATGAGGGCATTGGCTGTTCT 59.666 50.000 10.31 0.00 40.87 3.01
98 99 0.458669 CATGAGGGCATTGGCTGTTC 59.541 55.000 10.31 6.58 40.87 3.18
99 100 0.040058 TCATGAGGGCATTGGCTGTT 59.960 50.000 10.31 0.00 40.87 3.16
100 101 0.040058 TTCATGAGGGCATTGGCTGT 59.960 50.000 10.31 0.00 40.87 4.40
101 102 0.458669 GTTCATGAGGGCATTGGCTG 59.541 55.000 10.31 0.60 40.87 4.85
102 103 0.685458 GGTTCATGAGGGCATTGGCT 60.685 55.000 10.31 0.00 40.87 4.75
103 104 0.971959 TGGTTCATGAGGGCATTGGC 60.972 55.000 0.70 0.70 40.13 4.52
104 105 1.684983 GATGGTTCATGAGGGCATTGG 59.315 52.381 0.00 0.00 30.68 3.16
105 106 2.100252 GTGATGGTTCATGAGGGCATTG 59.900 50.000 0.00 0.00 33.56 2.82
106 107 2.024655 AGTGATGGTTCATGAGGGCATT 60.025 45.455 0.00 0.00 33.56 3.56
107 108 1.567649 AGTGATGGTTCATGAGGGCAT 59.432 47.619 0.00 0.00 33.56 4.40
108 109 0.994247 AGTGATGGTTCATGAGGGCA 59.006 50.000 0.00 0.00 33.56 5.36
109 110 1.673168 GAGTGATGGTTCATGAGGGC 58.327 55.000 0.00 0.00 33.56 5.19
110 111 1.473965 CCGAGTGATGGTTCATGAGGG 60.474 57.143 0.00 0.00 33.56 4.30
111 112 1.208052 ACCGAGTGATGGTTCATGAGG 59.792 52.381 0.00 0.00 35.82 3.86
112 113 2.544685 GACCGAGTGATGGTTCATGAG 58.455 52.381 0.00 0.00 40.63 2.90
113 114 1.207089 GGACCGAGTGATGGTTCATGA 59.793 52.381 0.00 0.00 40.63 3.07
114 115 1.208052 AGGACCGAGTGATGGTTCATG 59.792 52.381 0.00 0.00 40.63 3.07
115 116 1.573108 AGGACCGAGTGATGGTTCAT 58.427 50.000 0.00 0.00 40.63 2.57
116 117 1.001974 CAAGGACCGAGTGATGGTTCA 59.998 52.381 0.00 0.00 40.63 3.18
117 118 1.726853 CAAGGACCGAGTGATGGTTC 58.273 55.000 0.00 0.00 40.63 3.62
118 119 0.321653 GCAAGGACCGAGTGATGGTT 60.322 55.000 0.00 0.00 40.63 3.67
119 120 1.296715 GCAAGGACCGAGTGATGGT 59.703 57.895 0.00 0.00 44.10 3.55
120 121 1.450312 GGCAAGGACCGAGTGATGG 60.450 63.158 0.00 0.00 0.00 3.51
121 122 0.036010 AAGGCAAGGACCGAGTGATG 60.036 55.000 0.00 0.00 33.69 3.07
122 123 0.250513 GAAGGCAAGGACCGAGTGAT 59.749 55.000 0.00 0.00 33.69 3.06
123 124 0.832135 AGAAGGCAAGGACCGAGTGA 60.832 55.000 0.00 0.00 33.69 3.41
124 125 0.390472 GAGAAGGCAAGGACCGAGTG 60.390 60.000 0.00 0.00 33.69 3.51
125 126 0.543174 AGAGAAGGCAAGGACCGAGT 60.543 55.000 0.00 0.00 33.69 4.18
126 127 0.610687 AAGAGAAGGCAAGGACCGAG 59.389 55.000 0.00 0.00 33.69 4.63
127 128 1.933021 TAAGAGAAGGCAAGGACCGA 58.067 50.000 0.00 0.00 33.69 4.69
128 129 2.762535 TTAAGAGAAGGCAAGGACCG 57.237 50.000 0.00 0.00 33.69 4.79
129 130 3.956744 ACATTAAGAGAAGGCAAGGACC 58.043 45.455 0.00 0.00 0.00 4.46
130 131 5.703876 CAAACATTAAGAGAAGGCAAGGAC 58.296 41.667 0.00 0.00 0.00 3.85
131 132 4.218417 GCAAACATTAAGAGAAGGCAAGGA 59.782 41.667 0.00 0.00 0.00 3.36
132 133 4.488879 GCAAACATTAAGAGAAGGCAAGG 58.511 43.478 0.00 0.00 0.00 3.61
133 134 4.161333 CGCAAACATTAAGAGAAGGCAAG 58.839 43.478 0.00 0.00 0.00 4.01
134 135 3.057596 CCGCAAACATTAAGAGAAGGCAA 60.058 43.478 0.00 0.00 0.00 4.52
135 136 2.487762 CCGCAAACATTAAGAGAAGGCA 59.512 45.455 0.00 0.00 0.00 4.75
136 137 2.732282 GCCGCAAACATTAAGAGAAGGC 60.732 50.000 0.00 0.00 0.00 4.35
137 138 2.159379 GGCCGCAAACATTAAGAGAAGG 60.159 50.000 0.00 0.00 0.00 3.46
138 139 2.159379 GGGCCGCAAACATTAAGAGAAG 60.159 50.000 0.00 0.00 0.00 2.85
139 140 1.816224 GGGCCGCAAACATTAAGAGAA 59.184 47.619 0.00 0.00 0.00 2.87
140 141 1.459450 GGGCCGCAAACATTAAGAGA 58.541 50.000 0.00 0.00 0.00 3.10
141 142 0.098728 CGGGCCGCAAACATTAAGAG 59.901 55.000 15.42 0.00 0.00 2.85
142 143 0.321741 TCGGGCCGCAAACATTAAGA 60.322 50.000 23.83 0.00 0.00 2.10
143 144 0.098728 CTCGGGCCGCAAACATTAAG 59.901 55.000 23.83 6.02 0.00 1.85
144 145 1.309499 CCTCGGGCCGCAAACATTAA 61.309 55.000 23.83 0.00 0.00 1.40
145 146 1.747367 CCTCGGGCCGCAAACATTA 60.747 57.895 23.83 0.00 0.00 1.90
146 147 3.061848 CCTCGGGCCGCAAACATT 61.062 61.111 23.83 0.00 0.00 2.71
147 148 3.561120 TTCCTCGGGCCGCAAACAT 62.561 57.895 23.83 0.00 0.00 2.71
148 149 4.257654 TTCCTCGGGCCGCAAACA 62.258 61.111 23.83 1.73 0.00 2.83
149 150 3.431725 CTTCCTCGGGCCGCAAAC 61.432 66.667 23.83 0.00 0.00 2.93
150 151 3.894547 GACTTCCTCGGGCCGCAAA 62.895 63.158 23.83 13.80 0.00 3.68
151 152 4.388499 GACTTCCTCGGGCCGCAA 62.388 66.667 23.83 12.67 0.00 4.85
153 154 4.821589 CAGACTTCCTCGGGCCGC 62.822 72.222 23.83 5.01 0.00 6.53
154 155 3.358076 GACAGACTTCCTCGGGCCG 62.358 68.421 22.51 22.51 0.00 6.13
155 156 2.579738 GACAGACTTCCTCGGGCC 59.420 66.667 0.00 0.00 0.00 5.80
156 157 2.182030 CGACAGACTTCCTCGGGC 59.818 66.667 0.00 0.00 0.00 6.13
157 158 2.182030 GCGACAGACTTCCTCGGG 59.818 66.667 0.00 0.00 0.00 5.14
158 159 2.202492 CGCGACAGACTTCCTCGG 60.202 66.667 0.00 0.00 0.00 4.63
159 160 2.874010 ATGCGCGACAGACTTCCTCG 62.874 60.000 12.10 0.00 0.00 4.63
160 161 0.100682 TATGCGCGACAGACTTCCTC 59.899 55.000 12.10 0.00 0.00 3.71
161 162 0.101399 CTATGCGCGACAGACTTCCT 59.899 55.000 12.10 0.00 0.00 3.36
162 163 1.483424 GCTATGCGCGACAGACTTCC 61.483 60.000 12.10 0.00 0.00 3.46
163 164 0.526524 AGCTATGCGCGACAGACTTC 60.527 55.000 12.10 0.00 45.59 3.01
164 165 0.108615 AAGCTATGCGCGACAGACTT 60.109 50.000 12.10 9.58 45.59 3.01
165 166 0.526524 GAAGCTATGCGCGACAGACT 60.527 55.000 12.10 3.71 45.59 3.24
166 167 1.802300 CGAAGCTATGCGCGACAGAC 61.802 60.000 12.10 1.28 45.59 3.51
167 168 1.586303 CGAAGCTATGCGCGACAGA 60.586 57.895 12.10 3.67 45.59 3.41
168 169 2.916423 CGAAGCTATGCGCGACAG 59.084 61.111 12.10 3.63 45.59 3.51
176 177 8.659834 AAGGTTTTCTTTGTGGCGAAGCTATG 62.660 42.308 0.00 0.00 43.80 2.23
177 178 6.727504 AAGGTTTTCTTTGTGGCGAAGCTAT 61.728 40.000 0.00 0.00 43.80 2.97
178 179 5.464890 AAGGTTTTCTTTGTGGCGAAGCTA 61.465 41.667 0.00 0.00 43.80 3.32
179 180 4.746699 AAGGTTTTCTTTGTGGCGAAGCT 61.747 43.478 0.00 0.00 43.80 3.74
180 181 2.481276 AAGGTTTTCTTTGTGGCGAAGC 60.481 45.455 0.00 0.00 43.63 3.86
181 182 3.115554 CAAGGTTTTCTTTGTGGCGAAG 58.884 45.455 0.00 0.00 33.15 3.79
182 183 2.755655 TCAAGGTTTTCTTTGTGGCGAA 59.244 40.909 0.00 0.00 37.97 4.70
183 184 2.098443 GTCAAGGTTTTCTTTGTGGCGA 59.902 45.455 0.00 0.00 37.97 5.54
184 185 2.459934 GTCAAGGTTTTCTTTGTGGCG 58.540 47.619 0.00 0.00 37.97 5.69
185 186 2.430694 AGGTCAAGGTTTTCTTTGTGGC 59.569 45.455 0.00 0.00 37.97 5.01
186 187 4.159506 TGAAGGTCAAGGTTTTCTTTGTGG 59.840 41.667 0.00 0.00 37.97 4.17
187 188 5.323371 TGAAGGTCAAGGTTTTCTTTGTG 57.677 39.130 0.00 0.00 37.97 3.33
188 189 5.993748 TTGAAGGTCAAGGTTTTCTTTGT 57.006 34.783 0.00 0.00 37.97 2.83
189 190 5.754890 CCATTGAAGGTCAAGGTTTTCTTTG 59.245 40.000 2.42 0.00 40.05 2.77
190 191 5.660864 TCCATTGAAGGTCAAGGTTTTCTTT 59.339 36.000 2.42 0.00 40.05 2.52
191 192 5.208121 TCCATTGAAGGTCAAGGTTTTCTT 58.792 37.500 2.42 0.00 40.05 2.52
192 193 4.803452 TCCATTGAAGGTCAAGGTTTTCT 58.197 39.130 2.42 0.00 40.05 2.52
193 194 4.584743 ACTCCATTGAAGGTCAAGGTTTTC 59.415 41.667 2.42 0.00 40.05 2.29
194 195 4.546674 ACTCCATTGAAGGTCAAGGTTTT 58.453 39.130 2.42 0.00 40.05 2.43
195 196 4.184649 ACTCCATTGAAGGTCAAGGTTT 57.815 40.909 2.42 0.00 40.05 3.27
196 197 3.884037 ACTCCATTGAAGGTCAAGGTT 57.116 42.857 2.42 0.00 40.05 3.50
197 198 3.490348 CAACTCCATTGAAGGTCAAGGT 58.510 45.455 2.42 0.00 40.05 3.50
198 199 2.229784 GCAACTCCATTGAAGGTCAAGG 59.770 50.000 0.00 0.00 40.05 3.61
199 200 3.057736 CAGCAACTCCATTGAAGGTCAAG 60.058 47.826 0.00 0.00 40.05 3.02
200 201 2.886523 CAGCAACTCCATTGAAGGTCAA 59.113 45.455 0.00 0.00 41.23 3.18
201 202 2.507484 CAGCAACTCCATTGAAGGTCA 58.493 47.619 0.00 0.00 41.23 4.02
202 203 1.200948 GCAGCAACTCCATTGAAGGTC 59.799 52.381 0.00 0.00 41.23 3.85
203 204 1.202976 AGCAGCAACTCCATTGAAGGT 60.203 47.619 0.00 0.00 41.23 3.50
204 205 1.471684 GAGCAGCAACTCCATTGAAGG 59.528 52.381 0.00 0.00 41.23 3.46
205 206 2.419324 GAGAGCAGCAACTCCATTGAAG 59.581 50.000 8.01 0.00 41.23 3.02
206 207 2.224597 TGAGAGCAGCAACTCCATTGAA 60.225 45.455 14.33 0.00 41.23 2.69
207 208 1.348696 TGAGAGCAGCAACTCCATTGA 59.651 47.619 14.33 0.00 41.23 2.57
208 209 1.817357 TGAGAGCAGCAACTCCATTG 58.183 50.000 14.33 0.00 41.69 2.82
209 210 2.574006 TTGAGAGCAGCAACTCCATT 57.426 45.000 14.33 0.00 37.39 3.16
210 211 2.574006 TTTGAGAGCAGCAACTCCAT 57.426 45.000 14.33 0.00 37.39 3.41
211 212 2.158769 TCTTTTGAGAGCAGCAACTCCA 60.159 45.455 14.33 3.95 37.39 3.86
212 213 2.498167 TCTTTTGAGAGCAGCAACTCC 58.502 47.619 14.33 0.00 37.39 3.85
213 214 4.558538 TTTCTTTTGAGAGCAGCAACTC 57.441 40.909 11.26 11.26 36.91 3.01
214 215 5.526506 AATTTCTTTTGAGAGCAGCAACT 57.473 34.783 0.00 0.00 0.00 3.16
215 216 5.050567 CCAAATTTCTTTTGAGAGCAGCAAC 60.051 40.000 0.00 0.00 46.36 4.17
216 217 5.051816 CCAAATTTCTTTTGAGAGCAGCAA 58.948 37.500 0.00 0.00 46.36 3.91
217 218 4.624015 CCAAATTTCTTTTGAGAGCAGCA 58.376 39.130 0.00 0.00 46.36 4.41
218 219 3.431233 GCCAAATTTCTTTTGAGAGCAGC 59.569 43.478 0.00 0.00 46.36 5.25
219 220 4.446719 GTGCCAAATTTCTTTTGAGAGCAG 59.553 41.667 0.00 0.00 46.36 4.24
220 221 4.370917 GTGCCAAATTTCTTTTGAGAGCA 58.629 39.130 0.00 0.00 46.36 4.26
221 222 3.426525 CGTGCCAAATTTCTTTTGAGAGC 59.573 43.478 0.00 0.00 46.36 4.09
222 223 3.983344 CCGTGCCAAATTTCTTTTGAGAG 59.017 43.478 0.00 0.00 46.36 3.20
223 224 3.798548 GCCGTGCCAAATTTCTTTTGAGA 60.799 43.478 0.00 0.00 46.36 3.27
224 225 2.476241 GCCGTGCCAAATTTCTTTTGAG 59.524 45.455 0.00 0.00 46.36 3.02
225 226 2.478831 GCCGTGCCAAATTTCTTTTGA 58.521 42.857 0.00 0.00 46.36 2.69
226 227 1.192090 CGCCGTGCCAAATTTCTTTTG 59.808 47.619 0.00 0.00 43.64 2.44
227 228 1.067821 TCGCCGTGCCAAATTTCTTTT 59.932 42.857 0.00 0.00 0.00 2.27
228 229 0.671251 TCGCCGTGCCAAATTTCTTT 59.329 45.000 0.00 0.00 0.00 2.52
229 230 0.671251 TTCGCCGTGCCAAATTTCTT 59.329 45.000 0.00 0.00 0.00 2.52
230 231 0.671251 TTTCGCCGTGCCAAATTTCT 59.329 45.000 0.00 0.00 0.00 2.52
231 232 1.191425 GTTTTCGCCGTGCCAAATTTC 59.809 47.619 0.00 0.00 0.00 2.17
232 233 1.202475 AGTTTTCGCCGTGCCAAATTT 60.202 42.857 0.00 0.00 0.00 1.82
233 234 0.387565 AGTTTTCGCCGTGCCAAATT 59.612 45.000 0.00 0.00 0.00 1.82
234 235 1.199097 CTAGTTTTCGCCGTGCCAAAT 59.801 47.619 0.00 0.00 0.00 2.32
235 236 0.589223 CTAGTTTTCGCCGTGCCAAA 59.411 50.000 0.00 0.00 0.00 3.28
236 237 1.231958 CCTAGTTTTCGCCGTGCCAA 61.232 55.000 0.00 0.00 0.00 4.52
237 238 1.669760 CCTAGTTTTCGCCGTGCCA 60.670 57.895 0.00 0.00 0.00 4.92
238 239 0.390209 TACCTAGTTTTCGCCGTGCC 60.390 55.000 0.00 0.00 0.00 5.01
239 240 1.648504 ATACCTAGTTTTCGCCGTGC 58.351 50.000 0.00 0.00 0.00 5.34
240 241 4.175516 TGTTATACCTAGTTTTCGCCGTG 58.824 43.478 0.00 0.00 0.00 4.94
241 242 4.427312 CTGTTATACCTAGTTTTCGCCGT 58.573 43.478 0.00 0.00 0.00 5.68
242 243 3.800506 CCTGTTATACCTAGTTTTCGCCG 59.199 47.826 0.00 0.00 0.00 6.46
243 244 5.014808 TCCTGTTATACCTAGTTTTCGCC 57.985 43.478 0.00 0.00 0.00 5.54
244 245 7.279313 TCAAATCCTGTTATACCTAGTTTTCGC 59.721 37.037 0.00 0.00 0.00 4.70
245 246 8.601476 GTCAAATCCTGTTATACCTAGTTTTCG 58.399 37.037 0.00 0.00 0.00 3.46
246 247 9.668497 AGTCAAATCCTGTTATACCTAGTTTTC 57.332 33.333 0.00 0.00 0.00 2.29
247 248 9.449719 CAGTCAAATCCTGTTATACCTAGTTTT 57.550 33.333 0.00 0.00 0.00 2.43
248 249 8.822805 TCAGTCAAATCCTGTTATACCTAGTTT 58.177 33.333 0.00 0.00 0.00 2.66
249 250 8.375493 TCAGTCAAATCCTGTTATACCTAGTT 57.625 34.615 0.00 0.00 0.00 2.24
250 251 7.973048 TCAGTCAAATCCTGTTATACCTAGT 57.027 36.000 0.00 0.00 0.00 2.57
251 252 9.667107 TTTTCAGTCAAATCCTGTTATACCTAG 57.333 33.333 0.00 0.00 0.00 3.02
252 253 9.444600 GTTTTCAGTCAAATCCTGTTATACCTA 57.555 33.333 0.00 0.00 0.00 3.08
253 254 8.164070 AGTTTTCAGTCAAATCCTGTTATACCT 58.836 33.333 0.00 0.00 0.00 3.08
254 255 8.336801 AGTTTTCAGTCAAATCCTGTTATACC 57.663 34.615 0.00 0.00 0.00 2.73
255 256 9.220767 AGAGTTTTCAGTCAAATCCTGTTATAC 57.779 33.333 0.00 0.00 0.00 1.47
256 257 9.793259 AAGAGTTTTCAGTCAAATCCTGTTATA 57.207 29.630 0.00 0.00 0.00 0.98
257 258 8.697507 AAGAGTTTTCAGTCAAATCCTGTTAT 57.302 30.769 0.00 0.00 0.00 1.89
258 259 8.405531 CAAAGAGTTTTCAGTCAAATCCTGTTA 58.594 33.333 0.00 0.00 0.00 2.41
259 260 7.122650 TCAAAGAGTTTTCAGTCAAATCCTGTT 59.877 33.333 0.00 0.00 0.00 3.16
260 261 6.603201 TCAAAGAGTTTTCAGTCAAATCCTGT 59.397 34.615 0.00 0.00 0.00 4.00
261 262 7.031226 TCAAAGAGTTTTCAGTCAAATCCTG 57.969 36.000 0.00 0.00 0.00 3.86
262 263 7.645058 TTCAAAGAGTTTTCAGTCAAATCCT 57.355 32.000 0.00 0.00 0.00 3.24
263 264 8.758715 CAATTCAAAGAGTTTTCAGTCAAATCC 58.241 33.333 0.00 0.00 0.00 3.01
264 265 9.520204 TCAATTCAAAGAGTTTTCAGTCAAATC 57.480 29.630 0.00 0.00 0.00 2.17
265 266 9.305925 GTCAATTCAAAGAGTTTTCAGTCAAAT 57.694 29.630 0.00 0.00 0.00 2.32
266 267 7.484641 CGTCAATTCAAAGAGTTTTCAGTCAAA 59.515 33.333 0.00 0.00 0.00 2.69
267 268 6.966632 CGTCAATTCAAAGAGTTTTCAGTCAA 59.033 34.615 0.00 0.00 0.00 3.18
268 269 6.315144 TCGTCAATTCAAAGAGTTTTCAGTCA 59.685 34.615 0.00 0.00 0.00 3.41
269 270 6.715464 TCGTCAATTCAAAGAGTTTTCAGTC 58.285 36.000 0.00 0.00 0.00 3.51
270 271 6.677781 TCGTCAATTCAAAGAGTTTTCAGT 57.322 33.333 0.00 0.00 0.00 3.41
271 272 7.355017 TCATCGTCAATTCAAAGAGTTTTCAG 58.645 34.615 0.00 0.00 0.00 3.02
272 273 7.258022 TCATCGTCAATTCAAAGAGTTTTCA 57.742 32.000 0.00 0.00 0.00 2.69
273 274 8.560576 TTTCATCGTCAATTCAAAGAGTTTTC 57.439 30.769 0.00 0.00 0.00 2.29
274 275 8.925161 TTTTCATCGTCAATTCAAAGAGTTTT 57.075 26.923 0.00 0.00 0.00 2.43
275 276 8.925161 TTTTTCATCGTCAATTCAAAGAGTTT 57.075 26.923 0.00 0.00 0.00 2.66
297 298 2.296190 GCCTTCAATCGTGGGACTTTTT 59.704 45.455 0.00 0.00 0.00 1.94
298 299 1.886542 GCCTTCAATCGTGGGACTTTT 59.113 47.619 0.00 0.00 0.00 2.27
299 300 1.534729 GCCTTCAATCGTGGGACTTT 58.465 50.000 0.00 0.00 0.00 2.66
300 301 0.673644 CGCCTTCAATCGTGGGACTT 60.674 55.000 0.00 0.00 0.00 3.01
301 302 1.079127 CGCCTTCAATCGTGGGACT 60.079 57.895 0.00 0.00 0.00 3.85
302 303 0.108520 TACGCCTTCAATCGTGGGAC 60.109 55.000 0.00 0.00 39.46 4.46
303 304 0.828022 ATACGCCTTCAATCGTGGGA 59.172 50.000 0.00 0.00 39.46 4.37
304 305 1.217882 GATACGCCTTCAATCGTGGG 58.782 55.000 0.00 0.00 39.46 4.61
305 306 1.217882 GGATACGCCTTCAATCGTGG 58.782 55.000 0.00 0.00 39.46 4.94
325 326 0.037697 GAATTGGCCCGGTTTGAACC 60.038 55.000 0.00 2.75 45.76 3.62
326 327 0.966179 AGAATTGGCCCGGTTTGAAC 59.034 50.000 0.00 0.00 0.00 3.18
327 328 0.965439 CAGAATTGGCCCGGTTTGAA 59.035 50.000 0.00 0.00 0.00 2.69
328 329 1.531739 GCAGAATTGGCCCGGTTTGA 61.532 55.000 0.00 0.00 0.00 2.69
329 330 1.079888 GCAGAATTGGCCCGGTTTG 60.080 57.895 0.00 0.00 0.00 2.93
330 331 2.635443 CGCAGAATTGGCCCGGTTT 61.635 57.895 0.00 0.00 0.00 3.27
331 332 3.061848 CGCAGAATTGGCCCGGTT 61.062 61.111 0.00 0.00 0.00 4.44
332 333 3.976701 CTCGCAGAATTGGCCCGGT 62.977 63.158 0.00 0.00 34.09 5.28
333 334 3.204827 CTCGCAGAATTGGCCCGG 61.205 66.667 0.00 0.00 34.09 5.73
334 335 2.436646 ACTCGCAGAATTGGCCCG 60.437 61.111 0.00 0.00 34.09 6.13
335 336 1.377202 TGACTCGCAGAATTGGCCC 60.377 57.895 0.00 0.00 34.09 5.80
336 337 4.301505 TGACTCGCAGAATTGGCC 57.698 55.556 0.00 0.00 34.09 5.36
344 345 3.385384 TCTGGGCCTGACTCGCAG 61.385 66.667 9.30 0.00 44.49 5.18
345 346 3.695606 GTCTGGGCCTGACTCGCA 61.696 66.667 29.85 0.00 31.22 5.10
346 347 4.803426 CGTCTGGGCCTGACTCGC 62.803 72.222 32.27 13.68 31.62 5.03
347 348 4.135153 CCGTCTGGGCCTGACTCG 62.135 72.222 32.27 23.34 31.62 4.18
348 349 1.255667 TAACCGTCTGGGCCTGACTC 61.256 60.000 32.27 14.63 40.62 3.36
349 350 0.834687 TTAACCGTCTGGGCCTGACT 60.835 55.000 32.27 20.75 40.62 3.41
350 351 0.035739 TTTAACCGTCTGGGCCTGAC 59.964 55.000 28.08 28.08 40.62 3.51
351 352 0.988832 ATTTAACCGTCTGGGCCTGA 59.011 50.000 9.30 9.30 40.62 3.86
352 353 2.285977 GTATTTAACCGTCTGGGCCTG 58.714 52.381 4.53 4.06 40.62 4.85
353 354 1.211212 GGTATTTAACCGTCTGGGCCT 59.789 52.381 4.53 0.00 38.88 5.19
354 355 1.671979 GGTATTTAACCGTCTGGGCC 58.328 55.000 0.00 0.00 38.88 5.80
406 408 6.346439 CGCGAGATGAGAGAAATAAAAGATGG 60.346 42.308 0.00 0.00 0.00 3.51
418 420 2.519541 CCCCCGCGAGATGAGAGA 60.520 66.667 8.23 0.00 0.00 3.10
419 421 4.292178 GCCCCCGCGAGATGAGAG 62.292 72.222 8.23 0.00 0.00 3.20
456 468 0.933097 CACGGGCGAATTCAGATGAG 59.067 55.000 6.22 0.00 0.00 2.90
491 510 2.039724 GTTAGGGGAGGGGAGGGG 60.040 72.222 0.00 0.00 0.00 4.79
492 511 1.074395 GAGTTAGGGGAGGGGAGGG 60.074 68.421 0.00 0.00 0.00 4.30
493 512 1.074395 GGAGTTAGGGGAGGGGAGG 60.074 68.421 0.00 0.00 0.00 4.30
494 513 1.457831 CGGAGTTAGGGGAGGGGAG 60.458 68.421 0.00 0.00 0.00 4.30
495 514 2.694305 CGGAGTTAGGGGAGGGGA 59.306 66.667 0.00 0.00 0.00 4.81
496 515 2.327958 ATCCGGAGTTAGGGGAGGGG 62.328 65.000 11.34 0.00 32.43 4.79
497 516 0.832559 GATCCGGAGTTAGGGGAGGG 60.833 65.000 11.34 0.00 32.43 4.30
498 517 0.188834 AGATCCGGAGTTAGGGGAGG 59.811 60.000 11.34 0.00 32.43 4.30
499 518 1.623163 GAGATCCGGAGTTAGGGGAG 58.377 60.000 11.34 0.00 32.43 4.30
500 519 0.178998 CGAGATCCGGAGTTAGGGGA 60.179 60.000 11.34 0.00 33.91 4.81
501 520 0.467659 ACGAGATCCGGAGTTAGGGG 60.468 60.000 11.34 0.00 43.93 4.79
502 521 1.400737 AACGAGATCCGGAGTTAGGG 58.599 55.000 11.34 0.00 43.93 3.53
503 522 3.445857 GAAAACGAGATCCGGAGTTAGG 58.554 50.000 11.34 0.10 43.93 2.69
504 523 3.445857 GGAAAACGAGATCCGGAGTTAG 58.554 50.000 11.34 4.15 43.93 2.34
505 524 2.167075 GGGAAAACGAGATCCGGAGTTA 59.833 50.000 11.34 0.00 43.93 2.24
638 662 6.510157 CGTGCTGGACTGAATTTCATACATAC 60.510 42.308 0.00 2.53 0.00 2.39
639 663 5.523552 CGTGCTGGACTGAATTTCATACATA 59.476 40.000 0.00 0.00 0.00 2.29
688 741 5.435686 AAGAAATGGATGTACTGCTACCA 57.564 39.130 0.00 0.00 35.09 3.25
801 985 1.570813 TCGCCATATGCTCTCAAACG 58.429 50.000 0.00 0.00 38.05 3.60
805 989 3.758755 AGAAATCGCCATATGCTCTCA 57.241 42.857 0.00 0.00 38.05 3.27
806 990 4.060900 TGAAGAAATCGCCATATGCTCTC 58.939 43.478 0.00 0.00 38.05 3.20
807 991 4.063689 CTGAAGAAATCGCCATATGCTCT 58.936 43.478 0.00 0.00 38.05 4.09
809 993 2.551459 GCTGAAGAAATCGCCATATGCT 59.449 45.455 0.00 0.00 38.05 3.79
810 994 2.551459 AGCTGAAGAAATCGCCATATGC 59.449 45.455 0.00 0.00 0.00 3.14
811 995 3.188048 GGAGCTGAAGAAATCGCCATATG 59.812 47.826 0.00 0.00 0.00 1.78
812 996 3.072184 AGGAGCTGAAGAAATCGCCATAT 59.928 43.478 0.00 0.00 0.00 1.78
813 997 2.435805 AGGAGCTGAAGAAATCGCCATA 59.564 45.455 0.00 0.00 0.00 2.74
831 1017 2.918934 TCATGGGATCAAAACAGGAGGA 59.081 45.455 0.00 0.00 0.00 3.71
832 1018 3.370840 TCATGGGATCAAAACAGGAGG 57.629 47.619 0.00 0.00 0.00 4.30
833 1019 4.275810 ACATCATGGGATCAAAACAGGAG 58.724 43.478 0.00 0.00 0.00 3.69
865 1051 5.357314 ACATGAAAGCAAGATCATTCAGAGG 59.643 40.000 0.00 0.00 35.47 3.69
867 1053 8.515695 AATACATGAAAGCAAGATCATTCAGA 57.484 30.769 0.00 0.00 35.47 3.27
908 1095 2.412089 GTCAAACGAATTCGGAGACTGG 59.588 50.000 29.79 12.76 44.95 4.00
948 1135 3.618351 ACCAGATCCTTCTGCAATCAAG 58.382 45.455 0.00 0.00 46.76 3.02
972 1159 1.005748 CGAAGCCACAGTGAGAGCA 60.006 57.895 0.62 0.00 0.00 4.26
973 1160 1.011451 GTCGAAGCCACAGTGAGAGC 61.011 60.000 0.62 0.00 0.00 4.09
993 1180 1.063006 CTGCATCGCCATGGTTTCG 59.937 57.895 14.67 8.84 0.00 3.46
1051 1238 4.289342 CTCACAAGTATCAGCTCGATGAG 58.711 47.826 8.40 4.30 35.39 2.90
1059 1246 2.284190 GGAAGCCTCACAAGTATCAGC 58.716 52.381 0.00 0.00 0.00 4.26
1087 1274 0.743701 CCACAGCACCTCAGCAGATC 60.744 60.000 0.00 0.00 36.85 2.75
1102 1289 1.096967 CACTGCTTGCAGACACCACA 61.097 55.000 26.71 0.00 0.00 4.17
1106 1293 0.607489 ATCCCACTGCTTGCAGACAC 60.607 55.000 26.71 0.00 0.00 3.67
1299 1486 0.163788 ACGAAGCGCACAAGAAATCG 59.836 50.000 11.47 8.58 35.16 3.34
1420 1607 6.802608 TGTAGAACGAAGATTGATATTCCGT 58.197 36.000 0.00 0.00 0.00 4.69
1423 1610 7.938563 AGCTGTAGAACGAAGATTGATATTC 57.061 36.000 0.00 0.00 0.00 1.75
1426 1613 6.535150 CCAAAGCTGTAGAACGAAGATTGATA 59.465 38.462 0.00 0.00 0.00 2.15
1512 1705 1.059584 TGAAGGAACCACCAGCAGGA 61.060 55.000 0.35 0.00 42.04 3.86
1794 1987 4.098654 ACAGACACCTTGGAATCTATCTCG 59.901 45.833 0.00 0.00 0.00 4.04
1964 2160 8.072321 ACGACTATGCATGATAATCTTATCCT 57.928 34.615 10.16 0.00 38.98 3.24
2170 2369 6.136155 TCTTCAATTTCCAACCCTCTTTTCT 58.864 36.000 0.00 0.00 0.00 2.52
2763 2998 1.590932 CGCTGGGATCATCTTCTTGG 58.409 55.000 0.00 0.00 0.00 3.61
2903 3139 6.274157 ACTGATATACCCGAATAGCAAGAG 57.726 41.667 0.00 0.00 28.05 2.85
2904 3140 7.614192 TCATACTGATATACCCGAATAGCAAGA 59.386 37.037 0.00 0.00 28.05 3.02
2911 3147 6.098409 GTCCCATCATACTGATATACCCGAAT 59.902 42.308 0.00 0.00 34.28 3.34
2942 3179 4.273005 ACTGAAAAGCACGTGTTACAAG 57.727 40.909 18.38 10.54 0.00 3.16
3149 3428 8.259049 ACAATCTTGTAAAATGGCATGATTTG 57.741 30.769 0.00 2.46 40.16 2.32
3293 3630 1.002011 GGGCTTCCTCTTCCGCTTT 60.002 57.895 0.00 0.00 0.00 3.51
3427 3764 4.481463 AGATTTTTAAAATGCCCGTGACG 58.519 39.130 7.72 0.00 0.00 4.35
3429 3766 4.688413 GCAAGATTTTTAAAATGCCCGTGA 59.312 37.500 7.72 0.00 0.00 4.35
3466 3803 8.328758 ACCTCATATTCTTTTAGTGGAACATGA 58.671 33.333 0.00 0.00 44.52 3.07
3517 3854 5.105473 ACGTGCACACTTACTAGTATCCATT 60.105 40.000 18.64 0.00 31.96 3.16
3542 3879 3.092854 CGTTAAAAGAAACGTGCGTTGT 58.907 40.909 10.81 1.85 45.46 3.32
3645 3984 2.645838 ATGGCAGGTACACCATCATC 57.354 50.000 8.15 0.00 42.69 2.92
3656 3995 4.392940 GTCTATATTGCAAGATGGCAGGT 58.607 43.478 16.68 0.00 45.88 4.00
3735 4074 1.153997 GAACGAGAGAGGTGTCGGC 60.154 63.158 0.00 0.00 43.63 5.54
4255 5317 9.243637 GTTTTACAAGTATTTGCATCTGAACAA 57.756 29.630 0.00 0.00 37.85 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.