Multiple sequence alignment - TraesCS5B01G251600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G251600 chr5B 100.000 2801 0 0 1 2801 434035776 434038576 0.000000e+00 5173
1 TraesCS5B01G251600 chr5D 90.194 2162 103 42 691 2801 366905870 366907973 0.000000e+00 2717
2 TraesCS5B01G251600 chr5D 81.942 659 65 28 66 695 366905209 366905842 2.490000e-140 508
3 TraesCS5B01G251600 chr5A 87.991 2140 109 53 691 2801 468931333 468933353 0.000000e+00 2392
4 TraesCS5B01G251600 chr5A 81.016 669 54 31 66 695 468930670 468931304 5.460000e-127 464
5 TraesCS5B01G251600 chr2D 79.356 838 133 28 983 1801 449510252 449509436 1.130000e-153 553
6 TraesCS5B01G251600 chr2B 79.187 836 138 24 983 1801 529110157 529110973 5.270000e-152 547
7 TraesCS5B01G251600 chr2A 81.548 672 100 16 1076 1741 593509195 593509848 1.480000e-147 532


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G251600 chr5B 434035776 434038576 2800 False 5173.0 5173 100.0000 1 2801 1 chr5B.!!$F1 2800
1 TraesCS5B01G251600 chr5D 366905209 366907973 2764 False 1612.5 2717 86.0680 66 2801 2 chr5D.!!$F1 2735
2 TraesCS5B01G251600 chr5A 468930670 468933353 2683 False 1428.0 2392 84.5035 66 2801 2 chr5A.!!$F1 2735
3 TraesCS5B01G251600 chr2D 449509436 449510252 816 True 553.0 553 79.3560 983 1801 1 chr2D.!!$R1 818
4 TraesCS5B01G251600 chr2B 529110157 529110973 816 False 547.0 547 79.1870 983 1801 1 chr2B.!!$F1 818
5 TraesCS5B01G251600 chr2A 593509195 593509848 653 False 532.0 532 81.5480 1076 1741 1 chr2A.!!$F1 665

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
178 179 0.034896 GGTTCCTTTCTGTCTCGGCA 59.965 55.0 0.0 0.0 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1981 2111 0.531532 ATGTAGCACGAGCAGATGCC 60.532 55.0 7.77 0.0 45.49 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.712179 AACGGTAAAATTAGTCCCAAAACA 57.288 33.333 0.00 0.00 0.00 2.83
26 27 6.712179 ACGGTAAAATTAGTCCCAAAACAA 57.288 33.333 0.00 0.00 0.00 2.83
27 28 7.110043 ACGGTAAAATTAGTCCCAAAACAAA 57.890 32.000 0.00 0.00 0.00 2.83
28 29 7.204604 ACGGTAAAATTAGTCCCAAAACAAAG 58.795 34.615 0.00 0.00 0.00 2.77
29 30 6.144886 CGGTAAAATTAGTCCCAAAACAAAGC 59.855 38.462 0.00 0.00 0.00 3.51
30 31 6.987404 GGTAAAATTAGTCCCAAAACAAAGCA 59.013 34.615 0.00 0.00 0.00 3.91
31 32 6.918892 AAAATTAGTCCCAAAACAAAGCAC 57.081 33.333 0.00 0.00 0.00 4.40
32 33 5.869649 AATTAGTCCCAAAACAAAGCACT 57.130 34.783 0.00 0.00 0.00 4.40
33 34 4.911514 TTAGTCCCAAAACAAAGCACTC 57.088 40.909 0.00 0.00 0.00 3.51
34 35 2.031870 AGTCCCAAAACAAAGCACTCC 58.968 47.619 0.00 0.00 0.00 3.85
35 36 1.028905 TCCCAAAACAAAGCACTCCG 58.971 50.000 0.00 0.00 0.00 4.63
36 37 1.028905 CCCAAAACAAAGCACTCCGA 58.971 50.000 0.00 0.00 0.00 4.55
37 38 1.407258 CCCAAAACAAAGCACTCCGAA 59.593 47.619 0.00 0.00 0.00 4.30
38 39 2.159170 CCCAAAACAAAGCACTCCGAAA 60.159 45.455 0.00 0.00 0.00 3.46
39 40 2.857748 CCAAAACAAAGCACTCCGAAAC 59.142 45.455 0.00 0.00 0.00 2.78
40 41 3.506810 CAAAACAAAGCACTCCGAAACA 58.493 40.909 0.00 0.00 0.00 2.83
41 42 3.420839 AAACAAAGCACTCCGAAACAG 57.579 42.857 0.00 0.00 0.00 3.16
42 43 0.663153 ACAAAGCACTCCGAAACAGC 59.337 50.000 0.00 0.00 0.00 4.40
43 44 0.040067 CAAAGCACTCCGAAACAGCC 60.040 55.000 0.00 0.00 0.00 4.85
44 45 0.465460 AAAGCACTCCGAAACAGCCA 60.465 50.000 0.00 0.00 0.00 4.75
45 46 0.886490 AAGCACTCCGAAACAGCCAG 60.886 55.000 0.00 0.00 0.00 4.85
46 47 1.598130 GCACTCCGAAACAGCCAGT 60.598 57.895 0.00 0.00 0.00 4.00
47 48 0.320421 GCACTCCGAAACAGCCAGTA 60.320 55.000 0.00 0.00 0.00 2.74
48 49 1.429463 CACTCCGAAACAGCCAGTAC 58.571 55.000 0.00 0.00 0.00 2.73
49 50 1.000955 CACTCCGAAACAGCCAGTACT 59.999 52.381 0.00 0.00 0.00 2.73
50 51 2.230508 CACTCCGAAACAGCCAGTACTA 59.769 50.000 0.00 0.00 0.00 1.82
51 52 2.230750 ACTCCGAAACAGCCAGTACTAC 59.769 50.000 0.00 0.00 0.00 2.73
52 53 2.492484 CTCCGAAACAGCCAGTACTACT 59.508 50.000 0.00 0.00 0.00 2.57
53 54 2.490903 TCCGAAACAGCCAGTACTACTC 59.509 50.000 0.00 0.00 0.00 2.59
54 55 2.416972 CCGAAACAGCCAGTACTACTCC 60.417 54.545 0.00 0.00 0.00 3.85
55 56 2.492484 CGAAACAGCCAGTACTACTCCT 59.508 50.000 0.00 0.00 0.00 3.69
56 57 3.693085 CGAAACAGCCAGTACTACTCCTA 59.307 47.826 0.00 0.00 0.00 2.94
57 58 4.438472 CGAAACAGCCAGTACTACTCCTAC 60.438 50.000 0.00 0.00 0.00 3.18
58 59 4.319037 AACAGCCAGTACTACTCCTACT 57.681 45.455 0.00 0.00 0.00 2.57
59 60 5.447778 AACAGCCAGTACTACTCCTACTA 57.552 43.478 0.00 0.00 0.00 1.82
60 61 4.779696 ACAGCCAGTACTACTCCTACTAC 58.220 47.826 0.00 0.00 0.00 2.73
61 62 4.136051 CAGCCAGTACTACTCCTACTACC 58.864 52.174 0.00 0.00 0.00 3.18
62 63 3.784763 AGCCAGTACTACTCCTACTACCA 59.215 47.826 0.00 0.00 0.00 3.25
63 64 4.136051 GCCAGTACTACTCCTACTACCAG 58.864 52.174 0.00 0.00 0.00 4.00
64 65 4.385088 GCCAGTACTACTCCTACTACCAGT 60.385 50.000 0.00 0.00 0.00 4.00
74 75 3.022406 CCTACTACCAGTGTACCACTCC 58.978 54.545 0.00 0.00 43.43 3.85
107 108 1.529865 GCAGAACACAAGTAACCGACC 59.470 52.381 0.00 0.00 0.00 4.79
147 148 3.127533 CGCCCAGCTACCAGCAAC 61.128 66.667 0.38 0.00 45.56 4.17
148 149 2.034066 GCCCAGCTACCAGCAACA 59.966 61.111 0.38 0.00 45.56 3.33
149 150 2.042831 GCCCAGCTACCAGCAACAG 61.043 63.158 0.38 0.00 45.56 3.16
150 151 1.377725 CCCAGCTACCAGCAACAGG 60.378 63.158 0.38 0.00 45.56 4.00
151 152 2.042831 CCAGCTACCAGCAACAGGC 61.043 63.158 0.38 0.00 45.56 4.85
152 153 1.302752 CAGCTACCAGCAACAGGCA 60.303 57.895 0.38 0.00 45.56 4.75
153 154 1.002868 AGCTACCAGCAACAGGCAG 60.003 57.895 0.38 0.00 45.56 4.85
160 161 4.052229 GCAACAGGCAGCAGCAGG 62.052 66.667 2.65 0.00 44.61 4.85
161 162 2.596631 CAACAGGCAGCAGCAGGT 60.597 61.111 2.65 0.00 44.61 4.00
162 163 2.196776 AACAGGCAGCAGCAGGTT 59.803 55.556 2.65 3.57 44.61 3.50
163 164 1.900498 AACAGGCAGCAGCAGGTTC 60.900 57.895 2.65 0.00 44.61 3.62
164 165 3.060615 CAGGCAGCAGCAGGTTCC 61.061 66.667 2.65 0.00 44.61 3.62
165 166 3.255397 AGGCAGCAGCAGGTTCCT 61.255 61.111 2.65 0.00 44.61 3.36
166 167 2.282745 GGCAGCAGCAGGTTCCTT 60.283 61.111 2.65 0.00 44.61 3.36
167 168 1.905354 GGCAGCAGCAGGTTCCTTT 60.905 57.895 2.65 0.00 44.61 3.11
168 169 1.583477 GCAGCAGCAGGTTCCTTTC 59.417 57.895 0.00 0.00 41.58 2.62
169 170 0.892814 GCAGCAGCAGGTTCCTTTCT 60.893 55.000 0.00 0.00 41.58 2.52
170 171 0.879765 CAGCAGCAGGTTCCTTTCTG 59.120 55.000 0.00 11.24 0.00 3.02
171 172 0.475906 AGCAGCAGGTTCCTTTCTGT 59.524 50.000 14.80 4.65 33.81 3.41
172 173 0.877743 GCAGCAGGTTCCTTTCTGTC 59.122 55.000 14.80 7.54 33.81 3.51
173 174 1.544314 GCAGCAGGTTCCTTTCTGTCT 60.544 52.381 14.80 0.00 33.81 3.41
174 175 2.421619 CAGCAGGTTCCTTTCTGTCTC 58.578 52.381 8.70 0.00 33.81 3.36
175 176 1.001406 AGCAGGTTCCTTTCTGTCTCG 59.999 52.381 0.00 0.00 33.81 4.04
176 177 1.941668 GCAGGTTCCTTTCTGTCTCGG 60.942 57.143 0.00 0.00 33.81 4.63
177 178 0.321996 AGGTTCCTTTCTGTCTCGGC 59.678 55.000 0.00 0.00 0.00 5.54
178 179 0.034896 GGTTCCTTTCTGTCTCGGCA 59.965 55.000 0.00 0.00 0.00 5.69
179 180 1.339151 GGTTCCTTTCTGTCTCGGCAT 60.339 52.381 0.00 0.00 0.00 4.40
180 181 2.093658 GGTTCCTTTCTGTCTCGGCATA 60.094 50.000 0.00 0.00 0.00 3.14
181 182 3.190874 GTTCCTTTCTGTCTCGGCATAG 58.809 50.000 0.00 0.00 0.00 2.23
196 197 5.129634 TCGGCATAGGAAAATCATTAGCAA 58.870 37.500 0.00 0.00 0.00 3.91
201 202 4.989279 AGGAAAATCATTAGCAACGCAT 57.011 36.364 0.00 0.00 0.00 4.73
202 203 7.584108 CATAGGAAAATCATTAGCAACGCATA 58.416 34.615 0.00 0.00 0.00 3.14
203 204 6.639632 AGGAAAATCATTAGCAACGCATAT 57.360 33.333 0.00 0.00 0.00 1.78
205 206 5.630680 GGAAAATCATTAGCAACGCATATGG 59.369 40.000 4.56 0.00 0.00 2.74
206 207 5.772825 AAATCATTAGCAACGCATATGGT 57.227 34.783 4.56 0.00 0.00 3.55
207 208 5.772825 AATCATTAGCAACGCATATGGTT 57.227 34.783 4.56 4.43 0.00 3.67
209 210 5.922739 TCATTAGCAACGCATATGGTTAG 57.077 39.130 4.56 4.22 0.00 2.34
210 211 5.606505 TCATTAGCAACGCATATGGTTAGA 58.393 37.500 4.56 0.00 0.00 2.10
212 213 2.838736 AGCAACGCATATGGTTAGAGG 58.161 47.619 4.56 0.00 0.00 3.69
213 214 2.170607 AGCAACGCATATGGTTAGAGGT 59.829 45.455 4.56 0.00 0.00 3.85
218 242 6.509656 CAACGCATATGGTTAGAGGTAAGTA 58.490 40.000 4.56 0.00 0.00 2.24
219 243 6.328641 ACGCATATGGTTAGAGGTAAGTAG 57.671 41.667 4.56 0.00 0.00 2.57
220 244 5.832060 ACGCATATGGTTAGAGGTAAGTAGT 59.168 40.000 4.56 0.00 0.00 2.73
221 245 7.000472 ACGCATATGGTTAGAGGTAAGTAGTA 59.000 38.462 4.56 0.00 0.00 1.82
222 246 7.668886 ACGCATATGGTTAGAGGTAAGTAGTAT 59.331 37.037 4.56 0.00 0.00 2.12
241 265 9.257651 AGTAGTATTAACGGTTTCATGATTAGC 57.742 33.333 0.00 0.00 0.00 3.09
247 271 1.456732 GTTTCATGATTAGCGTGCGC 58.543 50.000 8.67 8.67 42.33 6.09
283 308 0.462047 GGCCGGACACAATCAGTAGG 60.462 60.000 5.05 0.00 0.00 3.18
286 311 0.108804 CGGACACAATCAGTAGGCGT 60.109 55.000 0.00 0.00 0.00 5.68
309 334 4.667262 TGCGTTTGGATAAATGGATTTCG 58.333 39.130 0.00 0.00 34.16 3.46
315 340 5.756195 TGGATAAATGGATTTCGCTTGAG 57.244 39.130 0.00 0.00 0.00 3.02
380 405 2.046892 CCTGTTCCTGCCCACTCG 60.047 66.667 0.00 0.00 0.00 4.18
410 442 1.009078 TGCGCCATGATTTCTCTTCG 58.991 50.000 4.18 0.00 0.00 3.79
444 476 1.205064 CACGCACGCTCCAAAAGAG 59.795 57.895 0.00 0.00 46.29 2.85
445 477 1.961277 ACGCACGCTCCAAAAGAGG 60.961 57.895 0.00 0.00 43.46 3.69
446 478 1.667830 CGCACGCTCCAAAAGAGGA 60.668 57.895 0.00 0.00 43.46 3.71
467 499 0.248215 CAACTTGCCGATCGAATGCC 60.248 55.000 18.66 0.00 0.00 4.40
473 505 0.232303 GCCGATCGAATGCCTAAACG 59.768 55.000 18.66 0.00 0.00 3.60
474 506 0.232303 CCGATCGAATGCCTAAACGC 59.768 55.000 18.66 0.00 0.00 4.84
501 556 4.035792 CAGTGCTGCTATTACTACTCGTCT 59.964 45.833 0.00 0.00 0.00 4.18
502 557 4.035792 AGTGCTGCTATTACTACTCGTCTG 59.964 45.833 0.00 0.00 0.00 3.51
503 558 3.243101 TGCTGCTATTACTACTCGTCTGC 60.243 47.826 0.00 0.00 0.00 4.26
509 564 1.366679 TACTACTCGTCTGCGGAGTG 58.633 55.000 3.10 0.00 38.89 3.51
525 580 2.477754 GGAGTGGTTCGTAGTTTTTCCG 59.522 50.000 0.00 0.00 0.00 4.30
540 595 4.272100 CCGTTTCGGGTTCGTCAT 57.728 55.556 0.00 0.00 44.15 3.06
621 676 3.873883 GATCGACCGACCGAGCGT 61.874 66.667 0.00 0.00 42.21 5.07
715 807 1.743772 GCTACATCCAACGCCACAGAT 60.744 52.381 0.00 0.00 0.00 2.90
789 883 4.748277 AAGCTACTATTACGCCAGGAAA 57.252 40.909 0.00 0.00 0.00 3.13
803 897 3.366781 GCCAGGAAATGAGAGAAAGCAAC 60.367 47.826 0.00 0.00 0.00 4.17
804 898 3.822735 CCAGGAAATGAGAGAAAGCAACA 59.177 43.478 0.00 0.00 0.00 3.33
805 899 4.279169 CCAGGAAATGAGAGAAAGCAACAA 59.721 41.667 0.00 0.00 0.00 2.83
806 900 5.218139 CAGGAAATGAGAGAAAGCAACAAC 58.782 41.667 0.00 0.00 0.00 3.32
832 926 0.968405 AGGCGTTGGAAAATGCATGT 59.032 45.000 0.00 0.00 31.71 3.21
845 939 1.136147 GCATGTCGAGCTTTGCCAG 59.864 57.895 0.00 0.00 0.00 4.85
884 983 0.325602 TACCTTAAACCCCCAGTGCG 59.674 55.000 0.00 0.00 0.00 5.34
887 986 1.586154 CTTAAACCCCCAGTGCGCAG 61.586 60.000 12.22 0.00 0.00 5.18
888 987 2.058125 TTAAACCCCCAGTGCGCAGA 62.058 55.000 12.22 0.00 0.00 4.26
893 992 4.790962 CCCAGTGCGCAGAGGCAT 62.791 66.667 12.22 0.00 45.99 4.40
894 993 2.187685 CCAGTGCGCAGAGGCATA 59.812 61.111 12.22 0.00 45.99 3.14
955 1065 2.874010 CTAGGTGCACGCCACTCTCG 62.874 65.000 11.45 0.00 44.08 4.04
967 1077 1.972223 ACTCTCGGTCCACACTCCG 60.972 63.158 0.00 0.00 46.93 4.63
980 1090 4.803426 CTCCGCTCACGCCCAGAC 62.803 72.222 0.00 0.00 38.22 3.51
983 1093 4.662961 CGCTCACGCCCAGACACA 62.663 66.667 0.00 0.00 0.00 3.72
984 1094 3.044305 GCTCACGCCCAGACACAC 61.044 66.667 0.00 0.00 0.00 3.82
985 1095 2.734723 CTCACGCCCAGACACACG 60.735 66.667 0.00 0.00 0.00 4.49
986 1096 4.961511 TCACGCCCAGACACACGC 62.962 66.667 0.00 0.00 0.00 5.34
1014 1124 3.367743 ACAATGCGGTGCCTGCAG 61.368 61.111 6.78 6.78 46.98 4.41
1275 1397 1.376812 GCCCCGGTACAAGAACCTG 60.377 63.158 0.00 0.00 37.39 4.00
1371 1493 1.206578 CAACGGCGTCATGAACACC 59.793 57.895 15.17 0.00 0.00 4.16
1523 1645 2.174107 CGTCTACGCCGTCGACAA 59.826 61.111 19.84 0.00 39.41 3.18
1847 1969 0.532640 TGATCCATTGGCGTGATCGG 60.533 55.000 0.00 0.00 38.15 4.18
1878 2000 2.092882 GGCGTTCTCGTGTAGTGCC 61.093 63.158 0.00 0.00 39.49 5.01
1879 2001 2.092882 GCGTTCTCGTGTAGTGCCC 61.093 63.158 0.00 0.00 39.49 5.36
1880 2002 1.445582 CGTTCTCGTGTAGTGCCCC 60.446 63.158 0.00 0.00 0.00 5.80
1881 2003 1.874345 CGTTCTCGTGTAGTGCCCCT 61.874 60.000 0.00 0.00 0.00 4.79
1882 2004 0.389948 GTTCTCGTGTAGTGCCCCTG 60.390 60.000 0.00 0.00 0.00 4.45
1883 2005 2.125512 CTCGTGTAGTGCCCCTGC 60.126 66.667 0.00 0.00 38.26 4.85
1884 2006 3.989698 CTCGTGTAGTGCCCCTGCG 62.990 68.421 0.00 0.00 41.78 5.18
1932 2057 4.154195 ACATAGTTGTGTGCTCGATTTTCC 59.846 41.667 0.00 0.00 33.85 3.13
1937 2062 1.734465 GTGTGCTCGATTTTCCTCTGG 59.266 52.381 0.00 0.00 0.00 3.86
1949 2076 6.874134 CGATTTTCCTCTGGTTTCTTCTTCTA 59.126 38.462 0.00 0.00 0.00 2.10
1958 2085 8.723942 TCTGGTTTCTTCTTCTATTTAGATGC 57.276 34.615 0.00 0.00 31.40 3.91
1979 2109 2.877168 CTCTTCTCTGTTTGTTGCTGCT 59.123 45.455 0.00 0.00 0.00 4.24
1980 2110 3.282021 TCTTCTCTGTTTGTTGCTGCTT 58.718 40.909 0.00 0.00 0.00 3.91
1981 2111 3.065786 TCTTCTCTGTTTGTTGCTGCTTG 59.934 43.478 0.00 0.00 0.00 4.01
1983 2113 0.102844 TCTGTTTGTTGCTGCTTGGC 59.897 50.000 0.00 0.00 0.00 4.52
1984 2114 0.179105 CTGTTTGTTGCTGCTTGGCA 60.179 50.000 0.00 0.00 40.74 4.92
2033 2184 2.762887 TGGTATCTTGAGCTCACCAGAG 59.237 50.000 18.03 11.54 44.96 3.35
2056 2207 6.176183 AGATTGATGTTCTTTTGGTCGATCT 58.824 36.000 0.00 0.00 35.97 2.75
2086 2238 1.801178 GAGTGAAACCTTGGAGCGAAG 59.199 52.381 0.00 0.00 37.80 3.79
2142 2294 2.734606 TGCGAATTTTCTCGTCGACAAT 59.265 40.909 17.16 4.26 40.99 2.71
2168 2320 6.119536 TGTTTTGAGTGACATGTTCCTAGTT 58.880 36.000 0.00 0.00 0.00 2.24
2190 2342 7.931275 AGTTCTACAAAGTCAATTTCTGGTTC 58.069 34.615 0.00 0.00 0.00 3.62
2219 2371 5.551760 AGTCTCAAATTTTCTATGGCGTG 57.448 39.130 0.00 0.00 0.00 5.34
2332 2486 1.475034 GGTGGATGCTTTGCTATCCGA 60.475 52.381 12.60 4.33 44.66 4.55
2338 2492 3.052455 TGCTTTGCTATCCGACTCAAA 57.948 42.857 0.00 0.00 0.00 2.69
2340 2494 2.222819 GCTTTGCTATCCGACTCAAACG 60.223 50.000 0.00 0.00 0.00 3.60
2368 2522 4.734398 ACAACACAAACCACACATGAAT 57.266 36.364 0.00 0.00 0.00 2.57
2370 2524 4.159321 ACAACACAAACCACACATGAATGA 59.841 37.500 0.00 0.00 0.00 2.57
2373 2527 5.350633 ACACAAACCACACATGAATGAAAG 58.649 37.500 0.00 0.00 0.00 2.62
2374 2528 5.105392 ACACAAACCACACATGAATGAAAGT 60.105 36.000 0.00 0.00 0.00 2.66
2375 2529 6.096141 ACACAAACCACACATGAATGAAAGTA 59.904 34.615 0.00 0.00 0.00 2.24
2376 2530 6.638063 CACAAACCACACATGAATGAAAGTAG 59.362 38.462 0.00 0.00 0.00 2.57
2433 2595 1.692411 AGGAGCGGTGAAAAAGCTTT 58.308 45.000 5.69 5.69 41.84 3.51
2463 2627 0.109735 GATGCATGCATGGCGATCAG 60.110 55.000 36.73 0.11 36.70 2.90
2514 2678 2.046285 CCATTTCGGGCTTTCGGCT 61.046 57.895 0.00 0.00 41.46 5.52
2515 2679 1.429423 CATTTCGGGCTTTCGGCTC 59.571 57.895 0.00 0.00 41.46 4.70
2532 2696 1.134560 GCTCGGCCTAACTATATCCCG 59.865 57.143 0.00 0.00 37.21 5.14
2546 2710 2.321263 ATCCCGCACATGGAGAGCTG 62.321 60.000 0.00 0.00 34.80 4.24
2560 2724 4.069869 GCTGAAGCTTGGCAGTGA 57.930 55.556 2.10 0.00 38.21 3.41
2561 2725 2.334307 GCTGAAGCTTGGCAGTGAA 58.666 52.632 2.10 0.00 38.21 3.18
2564 2728 1.952296 CTGAAGCTTGGCAGTGAAAGT 59.048 47.619 2.10 0.00 0.00 2.66
2739 2903 4.794439 TCATGTGTCGGCCGAGCG 62.794 66.667 31.97 15.26 0.00 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.554211 TGTTTTGGGACTAATTTTACCGTTTT 58.446 30.769 0.00 0.00 0.00 2.43
2 3 6.712179 TGTTTTGGGACTAATTTTACCGTT 57.288 33.333 0.00 0.00 0.00 4.44
3 4 6.712179 TTGTTTTGGGACTAATTTTACCGT 57.288 33.333 0.00 0.00 0.00 4.83
5 6 6.987404 TGCTTTGTTTTGGGACTAATTTTACC 59.013 34.615 0.00 0.00 0.00 2.85
7 8 7.787028 AGTGCTTTGTTTTGGGACTAATTTTA 58.213 30.769 0.00 0.00 30.28 1.52
8 9 6.649155 AGTGCTTTGTTTTGGGACTAATTTT 58.351 32.000 0.00 0.00 30.28 1.82
10 11 5.221441 GGAGTGCTTTGTTTTGGGACTAATT 60.221 40.000 0.00 0.00 32.12 1.40
11 12 4.280929 GGAGTGCTTTGTTTTGGGACTAAT 59.719 41.667 0.00 0.00 32.12 1.73
12 13 3.634910 GGAGTGCTTTGTTTTGGGACTAA 59.365 43.478 0.00 0.00 32.12 2.24
13 14 3.219281 GGAGTGCTTTGTTTTGGGACTA 58.781 45.455 0.00 0.00 32.12 2.59
14 15 2.031870 GGAGTGCTTTGTTTTGGGACT 58.968 47.619 0.00 0.00 34.52 3.85
15 16 1.269051 CGGAGTGCTTTGTTTTGGGAC 60.269 52.381 0.00 0.00 0.00 4.46
16 17 1.028905 CGGAGTGCTTTGTTTTGGGA 58.971 50.000 0.00 0.00 0.00 4.37
17 18 1.028905 TCGGAGTGCTTTGTTTTGGG 58.971 50.000 0.00 0.00 0.00 4.12
18 19 2.857748 GTTTCGGAGTGCTTTGTTTTGG 59.142 45.455 0.00 0.00 0.00 3.28
19 20 3.506810 TGTTTCGGAGTGCTTTGTTTTG 58.493 40.909 0.00 0.00 0.00 2.44
20 21 3.769536 CTGTTTCGGAGTGCTTTGTTTT 58.230 40.909 0.00 0.00 0.00 2.43
21 22 2.479560 GCTGTTTCGGAGTGCTTTGTTT 60.480 45.455 0.00 0.00 0.00 2.83
22 23 1.065551 GCTGTTTCGGAGTGCTTTGTT 59.934 47.619 0.00 0.00 0.00 2.83
23 24 0.663153 GCTGTTTCGGAGTGCTTTGT 59.337 50.000 0.00 0.00 0.00 2.83
24 25 0.040067 GGCTGTTTCGGAGTGCTTTG 60.040 55.000 0.00 0.00 0.00 2.77
25 26 0.465460 TGGCTGTTTCGGAGTGCTTT 60.465 50.000 0.00 0.00 0.00 3.51
26 27 0.886490 CTGGCTGTTTCGGAGTGCTT 60.886 55.000 0.00 0.00 0.00 3.91
27 28 1.302033 CTGGCTGTTTCGGAGTGCT 60.302 57.895 0.00 0.00 0.00 4.40
28 29 0.320421 TACTGGCTGTTTCGGAGTGC 60.320 55.000 1.31 0.00 0.00 4.40
29 30 1.000955 AGTACTGGCTGTTTCGGAGTG 59.999 52.381 1.31 0.00 0.00 3.51
30 31 1.339097 AGTACTGGCTGTTTCGGAGT 58.661 50.000 1.31 0.00 0.00 3.85
31 32 2.492484 AGTAGTACTGGCTGTTTCGGAG 59.508 50.000 5.39 0.00 0.00 4.63
32 33 2.490903 GAGTAGTACTGGCTGTTTCGGA 59.509 50.000 7.76 0.00 0.00 4.55
33 34 2.416972 GGAGTAGTACTGGCTGTTTCGG 60.417 54.545 7.76 0.00 0.00 4.30
34 35 2.492484 AGGAGTAGTACTGGCTGTTTCG 59.508 50.000 7.76 0.00 0.00 3.46
35 36 4.705991 AGTAGGAGTAGTACTGGCTGTTTC 59.294 45.833 7.76 0.00 29.24 2.78
36 37 4.675038 AGTAGGAGTAGTACTGGCTGTTT 58.325 43.478 7.76 0.00 29.24 2.83
37 38 4.319037 AGTAGGAGTAGTACTGGCTGTT 57.681 45.455 7.76 0.00 29.24 3.16
38 39 4.385088 GGTAGTAGGAGTAGTACTGGCTGT 60.385 50.000 7.76 1.74 35.92 4.40
39 40 4.136051 GGTAGTAGGAGTAGTACTGGCTG 58.864 52.174 7.76 0.00 35.92 4.85
40 41 3.784763 TGGTAGTAGGAGTAGTACTGGCT 59.215 47.826 7.76 3.42 35.92 4.75
41 42 4.136051 CTGGTAGTAGGAGTAGTACTGGC 58.864 52.174 7.76 0.00 35.92 4.85
42 43 5.124645 CACTGGTAGTAGGAGTAGTACTGG 58.875 50.000 7.76 0.00 35.92 4.00
43 44 5.743117 ACACTGGTAGTAGGAGTAGTACTG 58.257 45.833 7.76 0.00 35.92 2.74
44 45 6.126911 GGTACACTGGTAGTAGGAGTAGTACT 60.127 46.154 1.37 1.37 35.92 2.73
45 46 6.052360 GGTACACTGGTAGTAGGAGTAGTAC 58.948 48.000 0.00 0.00 35.16 2.73
46 47 5.726308 TGGTACACTGGTAGTAGGAGTAGTA 59.274 44.000 0.00 0.00 0.00 1.82
47 48 4.537688 TGGTACACTGGTAGTAGGAGTAGT 59.462 45.833 0.00 0.00 0.00 2.73
48 49 5.108187 TGGTACACTGGTAGTAGGAGTAG 57.892 47.826 0.00 0.00 0.00 2.57
64 65 2.280552 GGCCTCGTGGAGTGGTACA 61.281 63.158 7.92 0.00 35.96 2.90
124 125 3.211963 GGTAGCTGGGCGCAATGG 61.212 66.667 10.83 0.00 42.61 3.16
135 136 1.002868 CTGCCTGTTGCTGGTAGCT 60.003 57.895 2.24 0.00 42.97 3.32
140 141 4.052229 GCTGCTGCCTGTTGCTGG 62.052 66.667 3.85 0.00 42.00 4.85
145 146 1.900498 GAACCTGCTGCTGCCTGTT 60.900 57.895 13.47 15.05 38.71 3.16
146 147 2.282040 GAACCTGCTGCTGCCTGT 60.282 61.111 13.47 7.17 38.71 4.00
147 148 3.060615 GGAACCTGCTGCTGCCTG 61.061 66.667 13.47 6.51 38.71 4.85
148 149 2.363292 AAAGGAACCTGCTGCTGCCT 62.363 55.000 13.47 0.00 38.71 4.75
149 150 1.871126 GAAAGGAACCTGCTGCTGCC 61.871 60.000 13.47 0.00 38.71 4.85
150 151 0.892814 AGAAAGGAACCTGCTGCTGC 60.893 55.000 8.89 8.89 40.20 5.25
151 152 0.879765 CAGAAAGGAACCTGCTGCTG 59.120 55.000 0.00 0.00 0.00 4.41
152 153 0.475906 ACAGAAAGGAACCTGCTGCT 59.524 50.000 17.77 7.84 34.61 4.24
153 154 0.877743 GACAGAAAGGAACCTGCTGC 59.122 55.000 17.77 0.00 34.61 5.25
154 155 2.421619 GAGACAGAAAGGAACCTGCTG 58.578 52.381 16.83 16.83 36.21 4.41
155 156 1.001406 CGAGACAGAAAGGAACCTGCT 59.999 52.381 0.00 0.00 33.90 4.24
156 157 1.433534 CGAGACAGAAAGGAACCTGC 58.566 55.000 0.00 0.00 33.90 4.85
157 158 1.941668 GCCGAGACAGAAAGGAACCTG 60.942 57.143 0.00 0.00 36.53 4.00
159 160 0.034896 TGCCGAGACAGAAAGGAACC 59.965 55.000 0.00 0.00 0.00 3.62
160 161 2.100605 ATGCCGAGACAGAAAGGAAC 57.899 50.000 0.00 0.00 0.00 3.62
161 162 2.168521 CCTATGCCGAGACAGAAAGGAA 59.831 50.000 0.00 0.00 0.00 3.36
162 163 1.757118 CCTATGCCGAGACAGAAAGGA 59.243 52.381 0.00 0.00 0.00 3.36
163 164 1.757118 TCCTATGCCGAGACAGAAAGG 59.243 52.381 0.00 0.00 0.00 3.11
164 165 3.526931 TTCCTATGCCGAGACAGAAAG 57.473 47.619 0.00 0.00 0.00 2.62
165 166 3.973206 TTTCCTATGCCGAGACAGAAA 57.027 42.857 0.00 0.00 0.00 2.52
166 167 3.973206 TTTTCCTATGCCGAGACAGAA 57.027 42.857 0.00 0.00 0.00 3.02
167 168 3.450817 TGATTTTCCTATGCCGAGACAGA 59.549 43.478 0.00 0.00 0.00 3.41
168 169 3.797039 TGATTTTCCTATGCCGAGACAG 58.203 45.455 0.00 0.00 0.00 3.51
169 170 3.904800 TGATTTTCCTATGCCGAGACA 57.095 42.857 0.00 0.00 0.00 3.41
170 171 5.106908 GCTAATGATTTTCCTATGCCGAGAC 60.107 44.000 0.00 0.00 0.00 3.36
171 172 4.997395 GCTAATGATTTTCCTATGCCGAGA 59.003 41.667 0.00 0.00 0.00 4.04
172 173 4.756642 TGCTAATGATTTTCCTATGCCGAG 59.243 41.667 0.00 0.00 0.00 4.63
173 174 4.713553 TGCTAATGATTTTCCTATGCCGA 58.286 39.130 0.00 0.00 0.00 5.54
174 175 5.215160 GTTGCTAATGATTTTCCTATGCCG 58.785 41.667 0.00 0.00 0.00 5.69
175 176 5.215160 CGTTGCTAATGATTTTCCTATGCC 58.785 41.667 0.00 0.00 0.00 4.40
176 177 4.676924 GCGTTGCTAATGATTTTCCTATGC 59.323 41.667 0.00 0.00 0.00 3.14
177 178 5.820131 TGCGTTGCTAATGATTTTCCTATG 58.180 37.500 0.00 0.00 0.00 2.23
178 179 6.639632 ATGCGTTGCTAATGATTTTCCTAT 57.360 33.333 0.00 0.00 0.00 2.57
179 180 7.308529 CCATATGCGTTGCTAATGATTTTCCTA 60.309 37.037 0.00 0.00 0.00 2.94
180 181 4.989279 ATGCGTTGCTAATGATTTTCCT 57.011 36.364 0.00 0.00 0.00 3.36
181 182 5.630680 CCATATGCGTTGCTAATGATTTTCC 59.369 40.000 0.00 0.00 0.00 3.13
196 197 5.832060 ACTACTTACCTCTAACCATATGCGT 59.168 40.000 0.00 0.00 0.00 5.24
202 203 8.854117 CCGTTAATACTACTTACCTCTAACCAT 58.146 37.037 0.00 0.00 0.00 3.55
203 204 7.834181 ACCGTTAATACTACTTACCTCTAACCA 59.166 37.037 0.00 0.00 0.00 3.67
207 208 9.461312 TGAAACCGTTAATACTACTTACCTCTA 57.539 33.333 0.00 0.00 0.00 2.43
209 210 9.028185 CATGAAACCGTTAATACTACTTACCTC 57.972 37.037 0.00 0.00 0.00 3.85
210 211 8.752187 TCATGAAACCGTTAATACTACTTACCT 58.248 33.333 0.00 0.00 0.00 3.08
218 242 6.759827 ACGCTAATCATGAAACCGTTAATACT 59.240 34.615 0.00 0.00 0.00 2.12
219 243 6.844279 CACGCTAATCATGAAACCGTTAATAC 59.156 38.462 0.00 0.00 0.00 1.89
220 244 6.510478 GCACGCTAATCATGAAACCGTTAATA 60.510 38.462 0.00 0.00 0.00 0.98
221 245 5.729454 GCACGCTAATCATGAAACCGTTAAT 60.729 40.000 0.00 0.00 0.00 1.40
222 246 4.436317 GCACGCTAATCATGAAACCGTTAA 60.436 41.667 0.00 0.00 0.00 2.01
227 251 1.856014 GCGCACGCTAATCATGAAACC 60.856 52.381 7.96 0.00 38.26 3.27
283 308 1.917303 CCATTTATCCAAACGCAACGC 59.083 47.619 0.00 0.00 0.00 4.84
286 311 5.098893 CGAAATCCATTTATCCAAACGCAA 58.901 37.500 0.00 0.00 0.00 4.85
309 334 1.905922 GCGACAGGCTGAACTCAAGC 61.906 60.000 23.66 11.03 39.11 4.01
410 442 2.359850 TGGAGCAATCACGGTGGC 60.360 61.111 8.50 4.00 0.00 5.01
444 476 1.019278 TTCGATCGGCAAGTTGCTCC 61.019 55.000 26.16 10.65 44.28 4.70
445 477 1.009829 ATTCGATCGGCAAGTTGCTC 58.990 50.000 26.16 15.44 44.28 4.26
446 478 0.729116 CATTCGATCGGCAAGTTGCT 59.271 50.000 26.16 7.84 44.28 3.91
451 483 1.581934 TTAGGCATTCGATCGGCAAG 58.418 50.000 16.41 4.41 0.00 4.01
474 506 5.853810 CGAGTAGTAATAGCAGCACTGTATG 59.146 44.000 0.00 0.00 0.00 2.39
476 508 4.880120 ACGAGTAGTAATAGCAGCACTGTA 59.120 41.667 0.00 0.00 0.00 2.74
477 509 3.695060 ACGAGTAGTAATAGCAGCACTGT 59.305 43.478 0.00 0.00 0.00 3.55
480 512 4.283678 CAGACGAGTAGTAATAGCAGCAC 58.716 47.826 0.00 0.00 0.00 4.40
482 514 3.301706 GCAGACGAGTAGTAATAGCAGC 58.698 50.000 0.00 0.00 0.00 5.25
501 556 0.390124 AAACTACGAACCACTCCGCA 59.610 50.000 0.00 0.00 0.00 5.69
502 557 1.505425 AAAACTACGAACCACTCCGC 58.495 50.000 0.00 0.00 0.00 5.54
503 558 2.477754 GGAAAAACTACGAACCACTCCG 59.522 50.000 0.00 0.00 0.00 4.63
509 564 3.534889 CGAAACGGAAAAACTACGAACC 58.465 45.455 0.00 0.00 0.00 3.62
525 580 3.891056 AAAAGATGACGAACCCGAAAC 57.109 42.857 0.00 0.00 39.50 2.78
621 676 1.757682 AGCCACTTTGTTCGTTTCCA 58.242 45.000 0.00 0.00 0.00 3.53
655 710 1.068250 GGAGCTATCGTGCACTCCC 59.932 63.158 16.19 1.61 42.44 4.30
669 724 4.037684 AGAAAATTAGCATCAGCATGGAGC 59.962 41.667 0.00 0.00 45.49 4.70
715 807 2.438021 CCTCCCATCTTCGGTTTGGATA 59.562 50.000 0.00 0.00 31.94 2.59
774 868 5.201713 TCTCTCATTTCCTGGCGTAATAG 57.798 43.478 0.00 0.00 0.00 1.73
814 908 1.349234 GACATGCATTTTCCAACGCC 58.651 50.000 0.00 0.00 0.00 5.68
955 1065 2.048127 GTGAGCGGAGTGTGGACC 60.048 66.667 0.00 0.00 0.00 4.46
1221 1343 3.379445 TCGTCGGAGGGGCAGAAC 61.379 66.667 0.00 0.00 0.00 3.01
1523 1645 4.052229 CGACGGGCTCGAACACCT 62.052 66.667 15.95 0.00 46.14 4.00
1810 1932 1.420138 TCAGACACCAGGGAGGAAAAC 59.580 52.381 0.00 0.00 41.22 2.43
1854 1976 2.769000 TACACGAGAACGCCGTCACG 62.769 60.000 0.00 0.00 43.96 4.35
1865 1987 2.646175 GCAGGGGCACTACACGAGA 61.646 63.158 0.00 0.00 40.72 4.04
1884 2006 1.067582 CGGAAGTAGCACGGATCCC 59.932 63.158 6.06 0.00 0.00 3.85
1885 2007 1.591863 GCGGAAGTAGCACGGATCC 60.592 63.158 0.00 0.00 34.19 3.36
1886 2008 1.944676 CGCGGAAGTAGCACGGATC 60.945 63.158 0.00 0.00 34.19 3.36
1887 2009 2.104331 CGCGGAAGTAGCACGGAT 59.896 61.111 0.00 0.00 34.19 4.18
1888 2010 4.124351 CCGCGGAAGTAGCACGGA 62.124 66.667 24.07 0.00 46.71 4.69
1889 2011 3.636313 TTCCGCGGAAGTAGCACGG 62.636 63.158 35.81 0.00 45.15 4.94
1890 2012 2.126228 TTCCGCGGAAGTAGCACG 60.126 61.111 35.81 0.13 34.19 5.34
1891 2013 3.782042 CTTCCGCGGAAGTAGCAC 58.218 61.111 45.22 0.00 44.65 4.40
1932 2057 8.825745 GCATCTAAATAGAAGAAGAAACCAGAG 58.174 37.037 0.00 0.00 35.69 3.35
1958 2085 2.877168 AGCAGCAACAAACAGAGAAGAG 59.123 45.455 0.00 0.00 0.00 2.85
1979 2109 0.740868 GTAGCACGAGCAGATGCCAA 60.741 55.000 7.77 0.00 45.49 4.52
1980 2110 1.153568 GTAGCACGAGCAGATGCCA 60.154 57.895 7.77 0.00 45.49 4.92
1981 2111 0.531532 ATGTAGCACGAGCAGATGCC 60.532 55.000 7.77 0.00 45.49 4.40
1983 2113 2.125685 CTCATGTAGCACGAGCAGATG 58.874 52.381 7.77 7.67 45.49 2.90
1984 2114 2.027385 TCTCATGTAGCACGAGCAGAT 58.973 47.619 7.77 0.00 45.49 2.90
2015 2166 4.958581 TCAATCTCTGGTGAGCTCAAGATA 59.041 41.667 22.81 14.84 40.03 1.98
2033 2184 6.253746 CAGATCGACCAAAAGAACATCAATC 58.746 40.000 0.00 0.00 0.00 2.67
2056 2207 4.243008 TTTCACTCACCGGCGCCA 62.243 61.111 28.98 5.45 0.00 5.69
2127 2279 7.042321 ACTCAAAACATATTGTCGACGAGAAAA 60.042 33.333 11.74 0.00 0.00 2.29
2128 2280 6.422701 ACTCAAAACATATTGTCGACGAGAAA 59.577 34.615 11.74 3.47 0.00 2.52
2142 2294 7.450074 ACTAGGAACATGTCACTCAAAACATA 58.550 34.615 0.00 0.00 34.42 2.29
2168 2320 6.285224 TCGAACCAGAAATTGACTTTGTAGA 58.715 36.000 0.00 0.00 0.00 2.59
2190 2342 4.756084 AGAAAATTTGAGACTTGGCTCG 57.244 40.909 0.00 0.00 37.73 5.03
2219 2371 6.623743 GCATTTGTTTATACGATCTGACGAAC 59.376 38.462 0.00 0.00 37.03 3.95
2282 2434 6.579666 TGAAGTCCCAAGAAATGAATGAAG 57.420 37.500 0.00 0.00 0.00 3.02
2332 2486 2.162809 GTGTTGTTTGACCCGTTTGAGT 59.837 45.455 0.00 0.00 0.00 3.41
2338 2492 1.202817 GGTTTGTGTTGTTTGACCCGT 59.797 47.619 0.00 0.00 0.00 5.28
2340 2494 2.028930 TGTGGTTTGTGTTGTTTGACCC 60.029 45.455 0.00 0.00 0.00 4.46
2368 2522 4.022242 GTCACCTGCACTACTCTACTTTCA 60.022 45.833 0.00 0.00 0.00 2.69
2370 2524 3.895656 TGTCACCTGCACTACTCTACTTT 59.104 43.478 0.00 0.00 0.00 2.66
2373 2527 3.256136 ACTTGTCACCTGCACTACTCTAC 59.744 47.826 0.00 0.00 0.00 2.59
2374 2528 3.497332 ACTTGTCACCTGCACTACTCTA 58.503 45.455 0.00 0.00 0.00 2.43
2375 2529 2.320781 ACTTGTCACCTGCACTACTCT 58.679 47.619 0.00 0.00 0.00 3.24
2376 2530 2.821991 ACTTGTCACCTGCACTACTC 57.178 50.000 0.00 0.00 0.00 2.59
2463 2627 3.063485 ACTTCTCTTCTTCTTTCGCTGC 58.937 45.455 0.00 0.00 0.00 5.25
2514 2678 1.180029 GCGGGATATAGTTAGGCCGA 58.820 55.000 0.00 0.00 0.00 5.54
2515 2679 0.892755 TGCGGGATATAGTTAGGCCG 59.107 55.000 0.00 0.00 0.00 6.13
2516 2680 1.621814 TGTGCGGGATATAGTTAGGCC 59.378 52.381 0.00 0.00 0.00 5.19
2517 2681 3.262420 CATGTGCGGGATATAGTTAGGC 58.738 50.000 0.00 0.00 0.00 3.93
2518 2682 3.513912 TCCATGTGCGGGATATAGTTAGG 59.486 47.826 0.00 0.00 0.00 2.69
2523 2687 2.417924 GCTCTCCATGTGCGGGATATAG 60.418 54.545 0.00 0.00 33.04 1.31
2532 2696 2.096596 GCTTCAGCTCTCCATGTGC 58.903 57.895 0.00 0.00 38.21 4.57
2546 2710 1.678101 ACACTTTCACTGCCAAGCTTC 59.322 47.619 0.00 0.00 0.00 3.86
2553 2717 1.732259 CGGTATCACACTTTCACTGCC 59.268 52.381 0.00 0.00 0.00 4.85
2560 2724 1.296056 GCGTGCCGGTATCACACTTT 61.296 55.000 1.90 0.00 34.27 2.66
2561 2725 1.740296 GCGTGCCGGTATCACACTT 60.740 57.895 1.90 0.00 34.27 3.16
2564 2728 2.125713 CAGCGTGCCGGTATCACA 60.126 61.111 1.90 0.00 35.27 3.58
2594 2758 3.849951 TAGTGGGCTAGCGGCAGC 61.850 66.667 9.00 13.64 44.01 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.