Multiple sequence alignment - TraesCS5B01G249000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G249000 chr5B 100.000 6332 0 0 1 6332 431079699 431073368 0.000000e+00 11694.0
1 TraesCS5B01G249000 chr5B 88.125 480 36 13 534 1005 431350133 431349667 9.280000e-153 551.0
2 TraesCS5B01G249000 chr5B 97.059 136 3 1 3026 3161 125256966 125257100 1.780000e-55 228.0
3 TraesCS5B01G249000 chr5B 88.172 186 15 6 2993 3176 263801696 263801516 1.380000e-51 215.0
4 TraesCS5B01G249000 chr5B 93.706 143 8 1 3025 3167 412178604 412178745 4.970000e-51 213.0
5 TraesCS5B01G249000 chr5B 100.000 78 0 0 5884 5961 431073741 431073664 1.840000e-30 145.0
6 TraesCS5B01G249000 chr5B 100.000 78 0 0 5959 6036 431073816 431073739 1.840000e-30 145.0
7 TraesCS5B01G249000 chr5D 93.955 2680 75 24 3158 5806 365127825 365125202 0.000000e+00 3971.0
8 TraesCS5B01G249000 chr5D 92.126 2883 95 48 214 3036 365130632 365127822 0.000000e+00 3945.0
9 TraesCS5B01G249000 chr5D 86.441 354 33 13 532 880 365212762 365212419 2.160000e-99 374.0
10 TraesCS5B01G249000 chr5D 93.056 216 13 2 7 221 365154591 365154377 1.330000e-81 315.0
11 TraesCS5B01G249000 chr5D 92.130 216 15 2 7 221 365154171 365153957 2.870000e-78 303.0
12 TraesCS5B01G249000 chr5D 95.597 159 5 2 5804 5961 365125162 365125005 2.930000e-63 254.0
13 TraesCS5B01G249000 chr5D 88.889 189 14 5 6121 6303 365124959 365124772 6.390000e-55 226.0
14 TraesCS5B01G249000 chr5D 97.015 134 3 1 3035 3168 361647942 361648074 2.300000e-54 224.0
15 TraesCS5B01G249000 chr5D 94.545 110 4 2 5959 6068 365125081 365124974 1.090000e-37 169.0
16 TraesCS5B01G249000 chr5D 92.941 85 5 1 6102 6185 507218617 507218701 8.620000e-24 122.0
17 TraesCS5B01G249000 chr5A 91.045 2546 109 57 532 3036 466618546 466616079 0.000000e+00 3328.0
18 TraesCS5B01G249000 chr5A 93.452 1802 63 22 3158 4938 466616082 466614315 0.000000e+00 2623.0
19 TraesCS5B01G249000 chr5A 91.053 760 45 8 4889 5637 466614316 466613569 0.000000e+00 1005.0
20 TraesCS5B01G249000 chr5A 91.083 157 12 2 3035 3191 652666179 652666025 1.790000e-50 211.0
21 TraesCS5B01G249000 chr1B 82.945 815 81 19 665 1475 50182652 50183412 0.000000e+00 682.0
22 TraesCS5B01G249000 chr1B 97.727 132 3 0 3030 3161 623731980 623732111 1.780000e-55 228.0
23 TraesCS5B01G249000 chr1D 98.462 130 2 0 3034 3163 43298887 43298758 4.940000e-56 230.0
24 TraesCS5B01G249000 chr1D 94.406 143 6 2 3035 3176 416095994 416095853 1.070000e-52 219.0
25 TraesCS5B01G249000 chr1D 93.103 145 8 2 3030 3173 312469424 312469281 1.790000e-50 211.0
26 TraesCS5B01G249000 chr1D 80.000 90 18 0 114 203 4038446 4038535 4.100000e-07 67.6
27 TraesCS5B01G249000 chr3D 96.403 139 4 1 3023 3161 614251081 614251218 1.780000e-55 228.0
28 TraesCS5B01G249000 chr2D 96.377 138 5 0 3027 3164 536091161 536091024 1.780000e-55 228.0
29 TraesCS5B01G249000 chr2D 93.878 147 6 3 3020 3165 234328734 234328878 1.070000e-52 219.0
30 TraesCS5B01G249000 chr7D 95.588 136 6 0 3033 3168 598598597 598598462 1.070000e-52 219.0
31 TraesCS5B01G249000 chr7D 95.522 134 6 0 3035 3168 154192997 154193130 1.380000e-51 215.0
32 TraesCS5B01G249000 chr7D 95.238 84 3 1 6103 6185 446216349 446216432 1.430000e-26 132.0
33 TraesCS5B01G249000 chr2B 96.241 133 4 1 3034 3166 61230466 61230335 3.840000e-52 217.0
34 TraesCS5B01G249000 chrUn 94.048 84 4 1 6103 6185 100214719 100214802 6.660000e-25 126.0
35 TraesCS5B01G249000 chr6A 94.048 84 4 1 6103 6185 222571368 222571285 6.660000e-25 126.0
36 TraesCS5B01G249000 chr4B 94.048 84 4 1 6103 6185 57532478 57532561 6.660000e-25 126.0
37 TraesCS5B01G249000 chr7B 93.976 83 4 1 6104 6185 639691211 639691293 2.400000e-24 124.0
38 TraesCS5B01G249000 chr3B 93.976 83 4 1 6104 6185 734662246 734662164 2.400000e-24 124.0
39 TraesCS5B01G249000 chr2A 93.976 83 4 1 6104 6185 143728653 143728735 2.400000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G249000 chr5B 431073368 431079699 6331 True 11694.000000 11694 100.0000 1 6332 1 chr5B.!!$R2 6331
1 TraesCS5B01G249000 chr5D 365124772 365130632 5860 True 1713.000000 3971 93.0224 214 6303 5 chr5D.!!$R2 6089
2 TraesCS5B01G249000 chr5D 365153957 365154591 634 True 309.000000 315 92.5930 7 221 2 chr5D.!!$R3 214
3 TraesCS5B01G249000 chr5A 466613569 466618546 4977 True 2318.666667 3328 91.8500 532 5637 3 chr5A.!!$R2 5105
4 TraesCS5B01G249000 chr1B 50182652 50183412 760 False 682.000000 682 82.9450 665 1475 1 chr1B.!!$F1 810

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 151 0.034756 TGAACGTGACCCTGTGGATG 59.965 55.0 0.0 0.0 34.81 3.51 F
151 152 0.034896 GAACGTGACCCTGTGGATGT 59.965 55.0 0.0 0.0 34.81 3.06 F
206 207 0.038526 GTCGGTGAACATGACCTCGT 60.039 55.0 0.0 0.0 0.00 4.18 F
2159 2248 0.242825 TTGCAGAGAAGGTACGGACG 59.757 55.0 0.0 0.0 0.00 4.79 F
3051 3185 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.0 0.0 0.0 0.00 3.28 F
3052 3186 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.0 0.0 0.0 0.00 2.44 F
4066 4211 0.179097 GCATCGAGGACTCAGGGAAC 60.179 60.0 0.0 0.0 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1311 1381 1.078918 TCGTCGTCTCGCCTCCTAA 60.079 57.895 0.00 0.00 0.00 2.69 R
1559 1641 2.495270 TGATGAGCAGAAGACTGACCTC 59.505 50.000 0.00 0.00 46.03 3.85 R
2177 2266 2.629137 TCCTCAAAACATGCAGCAACAT 59.371 40.909 0.00 0.00 0.00 2.71 R
3141 3275 0.032813 TACTCCCTCCGTCCCGAAAT 60.033 55.000 0.00 0.00 0.00 2.17 R
4051 4196 0.612174 TCTGGTTCCCTGAGTCCTCG 60.612 60.000 0.00 0.00 0.00 4.63 R
4350 4499 1.069204 GCTACCTCATCAATCGGCTCA 59.931 52.381 0.00 0.00 0.00 4.26 R
6015 6288 0.325296 TGATAGAACCGGGCTGTCCT 60.325 55.000 16.74 3.64 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 5.867903 ATTCTCCACATCCAAACAAACAA 57.132 34.783 0.00 0.00 0.00 2.83
53 54 5.667539 TTCTCCACATCCAAACAAACAAA 57.332 34.783 0.00 0.00 0.00 2.83
86 87 1.070105 TCGTAGGCAGTTGGCGTTT 59.930 52.632 0.00 0.00 46.16 3.60
89 90 0.517316 GTAGGCAGTTGGCGTTTGAG 59.483 55.000 0.00 0.00 46.16 3.02
93 94 0.598065 GCAGTTGGCGTTTGAGGAAT 59.402 50.000 0.00 0.00 0.00 3.01
111 112 1.307097 ATAGTACCTCAGTCGCGGTC 58.693 55.000 6.13 0.00 34.76 4.79
123 124 2.813908 GCGGTCGTAGGCTGTTGG 60.814 66.667 0.00 0.00 42.88 3.77
124 125 2.813908 CGGTCGTAGGCTGTTGGC 60.814 66.667 0.00 0.00 40.90 4.52
125 126 2.813908 GGTCGTAGGCTGTTGGCG 60.814 66.667 0.00 0.00 44.18 5.69
126 127 3.488090 GTCGTAGGCTGTTGGCGC 61.488 66.667 0.00 0.00 44.18 6.53
127 128 3.691342 TCGTAGGCTGTTGGCGCT 61.691 61.111 7.64 0.00 44.18 5.92
128 129 3.188786 CGTAGGCTGTTGGCGCTC 61.189 66.667 7.64 0.00 44.18 5.03
129 130 3.188786 GTAGGCTGTTGGCGCTCG 61.189 66.667 7.64 0.00 44.18 5.03
130 131 3.378602 TAGGCTGTTGGCGCTCGA 61.379 61.111 7.64 0.00 44.18 4.04
131 132 2.721167 TAGGCTGTTGGCGCTCGAT 61.721 57.895 7.64 0.00 44.18 3.59
132 133 2.906182 TAGGCTGTTGGCGCTCGATG 62.906 60.000 7.64 0.00 44.18 3.84
133 134 2.815211 GCTGTTGGCGCTCGATGA 60.815 61.111 7.64 0.00 0.00 2.92
134 135 2.390599 GCTGTTGGCGCTCGATGAA 61.391 57.895 7.64 0.00 0.00 2.57
135 136 1.421485 CTGTTGGCGCTCGATGAAC 59.579 57.895 7.64 1.91 0.00 3.18
136 137 2.283780 CTGTTGGCGCTCGATGAACG 62.284 60.000 7.64 0.00 44.09 3.95
137 138 2.048597 TTGGCGCTCGATGAACGT 60.049 55.556 7.64 0.00 43.13 3.99
138 139 2.379634 TTGGCGCTCGATGAACGTG 61.380 57.895 7.64 0.00 43.13 4.49
139 140 2.506217 GGCGCTCGATGAACGTGA 60.506 61.111 7.64 0.00 43.13 4.35
140 141 2.689766 GCGCTCGATGAACGTGAC 59.310 61.111 0.00 0.00 43.13 3.67
141 142 2.789203 GCGCTCGATGAACGTGACC 61.789 63.158 0.00 0.00 43.13 4.02
142 143 2.158959 CGCTCGATGAACGTGACCC 61.159 63.158 0.00 0.00 43.13 4.46
143 144 1.215647 GCTCGATGAACGTGACCCT 59.784 57.895 0.00 0.00 43.13 4.34
144 145 1.078759 GCTCGATGAACGTGACCCTG 61.079 60.000 0.00 0.00 43.13 4.45
145 146 0.243907 CTCGATGAACGTGACCCTGT 59.756 55.000 0.00 0.00 43.13 4.00
146 147 0.038618 TCGATGAACGTGACCCTGTG 60.039 55.000 0.00 0.00 43.13 3.66
147 148 1.014044 CGATGAACGTGACCCTGTGG 61.014 60.000 0.00 0.00 37.22 4.17
148 149 0.320374 GATGAACGTGACCCTGTGGA 59.680 55.000 0.00 0.00 34.81 4.02
149 150 0.984230 ATGAACGTGACCCTGTGGAT 59.016 50.000 0.00 0.00 34.81 3.41
150 151 0.034756 TGAACGTGACCCTGTGGATG 59.965 55.000 0.00 0.00 34.81 3.51
151 152 0.034896 GAACGTGACCCTGTGGATGT 59.965 55.000 0.00 0.00 34.81 3.06
152 153 0.472471 AACGTGACCCTGTGGATGTT 59.528 50.000 0.00 0.00 34.81 2.71
153 154 0.250295 ACGTGACCCTGTGGATGTTG 60.250 55.000 0.00 0.00 34.81 3.33
154 155 0.250295 CGTGACCCTGTGGATGTTGT 60.250 55.000 0.00 0.00 34.81 3.32
155 156 1.813862 CGTGACCCTGTGGATGTTGTT 60.814 52.381 0.00 0.00 34.81 2.83
156 157 2.306847 GTGACCCTGTGGATGTTGTTT 58.693 47.619 0.00 0.00 34.81 2.83
157 158 2.293399 GTGACCCTGTGGATGTTGTTTC 59.707 50.000 0.00 0.00 34.81 2.78
158 159 1.535462 GACCCTGTGGATGTTGTTTCG 59.465 52.381 0.00 0.00 34.81 3.46
159 160 0.240945 CCCTGTGGATGTTGTTTCGC 59.759 55.000 0.00 0.00 0.00 4.70
160 161 0.110238 CCTGTGGATGTTGTTTCGCG 60.110 55.000 0.00 0.00 0.00 5.87
161 162 0.110238 CTGTGGATGTTGTTTCGCGG 60.110 55.000 6.13 0.00 0.00 6.46
162 163 0.816018 TGTGGATGTTGTTTCGCGGT 60.816 50.000 6.13 0.00 0.00 5.68
163 164 1.149987 GTGGATGTTGTTTCGCGGTA 58.850 50.000 6.13 0.00 0.00 4.02
164 165 1.735571 GTGGATGTTGTTTCGCGGTAT 59.264 47.619 6.13 0.00 0.00 2.73
165 166 1.735018 TGGATGTTGTTTCGCGGTATG 59.265 47.619 6.13 0.00 0.00 2.39
166 167 1.531058 GGATGTTGTTTCGCGGTATGC 60.531 52.381 6.13 0.00 41.47 3.14
167 168 0.450184 ATGTTGTTTCGCGGTATGCC 59.550 50.000 6.13 0.00 42.08 4.40
168 169 0.885150 TGTTGTTTCGCGGTATGCCA 60.885 50.000 6.13 0.00 42.08 4.92
169 170 0.450184 GTTGTTTCGCGGTATGCCAT 59.550 50.000 6.13 0.00 42.08 4.40
170 171 1.666700 GTTGTTTCGCGGTATGCCATA 59.333 47.619 6.13 0.00 42.08 2.74
171 172 1.292061 TGTTTCGCGGTATGCCATAC 58.708 50.000 6.13 6.29 42.08 2.39
179 180 3.329300 GTATGCCATACCCCAGCTG 57.671 57.895 6.78 6.78 0.00 4.24
180 181 0.250901 GTATGCCATACCCCAGCTGG 60.251 60.000 26.87 26.87 0.00 4.85
181 182 0.697511 TATGCCATACCCCAGCTGGT 60.698 55.000 30.63 16.39 42.62 4.00
182 183 1.583784 ATGCCATACCCCAGCTGGTT 61.584 55.000 30.63 19.46 39.91 3.67
183 184 1.754234 GCCATACCCCAGCTGGTTG 60.754 63.158 30.63 22.76 39.91 3.77
184 185 1.076777 CCATACCCCAGCTGGTTGG 60.077 63.158 30.63 26.29 39.91 3.77
190 191 4.722700 CCAGCTGGTTGGGGGTCG 62.723 72.222 25.53 0.00 34.46 4.79
191 192 4.722700 CAGCTGGTTGGGGGTCGG 62.723 72.222 5.57 0.00 0.00 4.79
194 195 3.246112 CTGGTTGGGGGTCGGTGA 61.246 66.667 0.00 0.00 0.00 4.02
195 196 2.773053 TGGTTGGGGGTCGGTGAA 60.773 61.111 0.00 0.00 0.00 3.18
196 197 2.281970 GGTTGGGGGTCGGTGAAC 60.282 66.667 0.00 0.00 0.00 3.18
197 198 2.511900 GTTGGGGGTCGGTGAACA 59.488 61.111 0.00 0.00 0.00 3.18
198 199 1.074248 GTTGGGGGTCGGTGAACAT 59.926 57.895 0.00 0.00 0.00 2.71
199 200 1.074072 TTGGGGGTCGGTGAACATG 59.926 57.895 0.00 0.00 0.00 3.21
200 201 1.419720 TTGGGGGTCGGTGAACATGA 61.420 55.000 0.00 0.00 0.00 3.07
201 202 1.376812 GGGGGTCGGTGAACATGAC 60.377 63.158 0.00 0.00 0.00 3.06
204 205 3.139029 GGTCGGTGAACATGACCTC 57.861 57.895 16.40 0.00 46.86 3.85
205 206 0.736325 GGTCGGTGAACATGACCTCG 60.736 60.000 16.40 0.00 46.86 4.63
206 207 0.038526 GTCGGTGAACATGACCTCGT 60.039 55.000 0.00 0.00 0.00 4.18
207 208 0.677288 TCGGTGAACATGACCTCGTT 59.323 50.000 0.00 0.00 0.00 3.85
208 209 0.790207 CGGTGAACATGACCTCGTTG 59.210 55.000 0.00 0.00 0.00 4.10
209 210 1.604438 CGGTGAACATGACCTCGTTGA 60.604 52.381 0.00 0.00 0.00 3.18
210 211 2.699954 GGTGAACATGACCTCGTTGAT 58.300 47.619 0.00 0.00 0.00 2.57
211 212 2.416547 GGTGAACATGACCTCGTTGATG 59.583 50.000 0.00 0.00 0.00 3.07
212 213 2.076100 TGAACATGACCTCGTTGATGC 58.924 47.619 0.00 0.00 0.00 3.91
226 227 2.043652 ATGCCATCCCACCACAGC 60.044 61.111 0.00 0.00 0.00 4.40
245 246 1.301244 CGGCTGGCGCTAGATGAAT 60.301 57.895 26.32 0.00 36.09 2.57
254 255 3.005897 GGCGCTAGATGAATAGAACCTCA 59.994 47.826 7.64 0.00 0.00 3.86
257 258 4.551388 GCTAGATGAATAGAACCTCACCG 58.449 47.826 0.00 0.00 0.00 4.94
260 261 1.568504 TGAATAGAACCTCACCGCCT 58.431 50.000 0.00 0.00 0.00 5.52
261 262 1.480954 TGAATAGAACCTCACCGCCTC 59.519 52.381 0.00 0.00 0.00 4.70
290 291 0.535102 CGAGAGAGGAGAGGGAGAGC 60.535 65.000 0.00 0.00 0.00 4.09
308 309 2.450243 GAGGGAGGGGAGTGACCA 59.550 66.667 0.00 0.00 41.20 4.02
336 346 2.674796 GACCCAGTCGCTTTAGACAT 57.325 50.000 0.00 0.00 43.24 3.06
340 350 2.431057 CCCAGTCGCTTTAGACATAGGT 59.569 50.000 0.00 0.00 43.24 3.08
352 362 0.803380 ACATAGGTCGTTAACGCCGC 60.803 55.000 22.96 14.38 39.38 6.53
355 365 1.640210 TAGGTCGTTAACGCCGCGTA 61.640 55.000 22.96 16.26 39.99 4.42
381 391 0.392998 GTTGTCGGCACATGAGGGAT 60.393 55.000 0.00 0.00 30.55 3.85
414 424 7.171848 TGTTAAAACGTGCTCAGAAAATAGCTA 59.828 33.333 0.00 0.00 39.53 3.32
461 471 1.822581 GATTCGGCGCAAAATACCAC 58.177 50.000 10.83 0.00 0.00 4.16
466 476 1.822581 GGCGCAAAATACCACGAATC 58.177 50.000 10.83 0.00 0.00 2.52
467 477 1.452717 GCGCAAAATACCACGAATCG 58.547 50.000 0.30 0.00 0.00 3.34
496 506 7.734924 ATTATGCTAATCGTGACATGAATGT 57.265 32.000 0.00 0.00 45.16 2.71
515 525 2.683362 TGTGACGGTTGTGTGCATTTTA 59.317 40.909 0.00 0.00 0.00 1.52
516 526 3.040099 GTGACGGTTGTGTGCATTTTAC 58.960 45.455 0.00 0.00 0.00 2.01
517 527 2.946329 TGACGGTTGTGTGCATTTTACT 59.054 40.909 0.00 0.00 0.00 2.24
519 529 3.959943 ACGGTTGTGTGCATTTTACTTC 58.040 40.909 0.00 0.00 0.00 3.01
520 530 3.378742 ACGGTTGTGTGCATTTTACTTCA 59.621 39.130 0.00 0.00 0.00 3.02
521 531 4.142359 ACGGTTGTGTGCATTTTACTTCAA 60.142 37.500 0.00 0.00 0.00 2.69
522 532 4.800993 CGGTTGTGTGCATTTTACTTCAAA 59.199 37.500 0.00 0.00 0.00 2.69
714 727 3.461773 CATCCACCGTCGGCTCCT 61.462 66.667 12.28 0.00 0.00 3.69
929 952 2.675075 CGCCGGAACCCAAACCAT 60.675 61.111 5.05 0.00 0.00 3.55
980 1024 4.097361 GACAAGACCCCGCCCCTC 62.097 72.222 0.00 0.00 0.00 4.30
1300 1369 3.118038 TCTGGTTGGATTTTAGATCCCGG 60.118 47.826 0.00 0.00 37.40 5.73
1301 1370 2.847449 TGGTTGGATTTTAGATCCCGGA 59.153 45.455 0.73 0.00 37.40 5.14
1302 1371 3.118038 TGGTTGGATTTTAGATCCCGGAG 60.118 47.826 0.73 0.00 37.40 4.63
1303 1372 2.879026 GTTGGATTTTAGATCCCGGAGC 59.121 50.000 0.73 0.00 37.40 4.70
1304 1373 2.123589 TGGATTTTAGATCCCGGAGCA 58.876 47.619 0.73 0.00 37.40 4.26
1305 1374 2.711009 TGGATTTTAGATCCCGGAGCAT 59.289 45.455 0.73 0.00 37.40 3.79
1311 1381 4.437682 TTAGATCCCGGAGCATTTGATT 57.562 40.909 0.73 0.00 0.00 2.57
1321 1391 3.206150 GAGCATTTGATTTAGGAGGCGA 58.794 45.455 0.00 0.00 0.00 5.54
1354 1424 1.022982 TTCTGGATTGCTGCGCTCTG 61.023 55.000 9.73 0.00 0.00 3.35
1432 1514 3.998341 GCCAATTCGTTTGTGAGTAGGTA 59.002 43.478 0.00 0.00 33.15 3.08
1434 1516 4.630069 CCAATTCGTTTGTGAGTAGGTAGG 59.370 45.833 1.37 0.00 33.15 3.18
1497 1579 4.096003 TCCTGCAGGTTAGCCGCC 62.096 66.667 31.58 0.00 40.50 6.13
1559 1641 0.250295 TGTTCCTTCGGGAGCTTGTG 60.250 55.000 0.00 0.00 45.95 3.33
1594 1676 8.599055 TTCTGCTCATCAAGATGTATGATAAC 57.401 34.615 9.66 0.00 39.72 1.89
1638 1726 3.133721 GCTGACTATCTGACCTGGACAAT 59.866 47.826 0.00 0.26 0.00 2.71
1642 1730 6.542821 TGACTATCTGACCTGGACAATTTTT 58.457 36.000 0.00 0.00 0.00 1.94
1804 1892 7.282450 TCACGTATGTTCTTCTCTATGAGCTTA 59.718 37.037 0.00 0.00 0.00 3.09
1839 1927 8.484641 TCATCAATTCTGATAGAAGTCACAAC 57.515 34.615 0.00 0.00 40.49 3.32
2155 2244 3.026630 TCTTGTTGCAGAGAAGGTACG 57.973 47.619 6.13 0.00 29.93 3.67
2156 2245 2.069273 CTTGTTGCAGAGAAGGTACGG 58.931 52.381 0.00 0.00 0.00 4.02
2157 2246 1.334160 TGTTGCAGAGAAGGTACGGA 58.666 50.000 0.00 0.00 0.00 4.69
2158 2247 1.000506 TGTTGCAGAGAAGGTACGGAC 59.999 52.381 0.00 0.00 0.00 4.79
2159 2248 0.242825 TTGCAGAGAAGGTACGGACG 59.757 55.000 0.00 0.00 0.00 4.79
2177 2266 4.159693 CGGACGGAATATCTATTGGATGGA 59.840 45.833 0.00 0.00 35.98 3.41
2824 2958 6.514870 GCATTTGGTTGTCACTGATCAAACTA 60.515 38.462 0.00 0.00 33.11 2.24
3037 3171 9.826574 TGTGAAACATGTCTTTACTTTAGTACT 57.173 29.630 0.00 0.00 45.67 2.73
3039 3173 9.485206 TGAAACATGTCTTTACTTTAGTACTCC 57.515 33.333 0.00 0.00 0.00 3.85
3040 3174 8.843885 AAACATGTCTTTACTTTAGTACTCCC 57.156 34.615 0.00 0.00 0.00 4.30
3041 3175 7.793948 ACATGTCTTTACTTTAGTACTCCCT 57.206 36.000 0.00 0.00 0.00 4.20
3042 3176 7.838884 ACATGTCTTTACTTTAGTACTCCCTC 58.161 38.462 0.00 0.00 0.00 4.30
3043 3177 6.847421 TGTCTTTACTTTAGTACTCCCTCC 57.153 41.667 0.00 0.00 0.00 4.30
3044 3178 5.416952 TGTCTTTACTTTAGTACTCCCTCCG 59.583 44.000 0.00 0.00 0.00 4.63
3045 3179 5.417266 GTCTTTACTTTAGTACTCCCTCCGT 59.583 44.000 0.00 0.00 0.00 4.69
3046 3180 5.649831 TCTTTACTTTAGTACTCCCTCCGTC 59.350 44.000 0.00 0.00 0.00 4.79
3047 3181 2.732763 ACTTTAGTACTCCCTCCGTCC 58.267 52.381 0.00 0.00 0.00 4.79
3048 3182 2.030371 CTTTAGTACTCCCTCCGTCCC 58.970 57.143 0.00 0.00 0.00 4.46
3049 3183 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
3050 3184 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
3051 3185 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3052 3186 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3053 3187 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
3054 3188 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
3055 3189 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
3056 3190 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3057 3191 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3058 3192 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3059 3193 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3060 3194 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3061 3195 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3062 3196 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
3063 3197 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3064 3198 4.758165 TCCGTCCCAAAATTCTTGTCTTAC 59.242 41.667 0.00 0.00 0.00 2.34
3065 3199 4.517453 CCGTCCCAAAATTCTTGTCTTACA 59.483 41.667 0.00 0.00 0.00 2.41
3066 3200 5.183140 CCGTCCCAAAATTCTTGTCTTACAT 59.817 40.000 0.00 0.00 0.00 2.29
3067 3201 6.294508 CCGTCCCAAAATTCTTGTCTTACATT 60.295 38.462 0.00 0.00 0.00 2.71
3068 3202 7.145323 CGTCCCAAAATTCTTGTCTTACATTT 58.855 34.615 0.00 0.00 0.00 2.32
3069 3203 7.114811 CGTCCCAAAATTCTTGTCTTACATTTG 59.885 37.037 0.00 0.00 0.00 2.32
3070 3204 7.926018 GTCCCAAAATTCTTGTCTTACATTTGT 59.074 33.333 0.00 0.00 27.14 2.83
3071 3205 8.141268 TCCCAAAATTCTTGTCTTACATTTGTC 58.859 33.333 0.00 0.00 27.14 3.18
3072 3206 8.143835 CCCAAAATTCTTGTCTTACATTTGTCT 58.856 33.333 0.00 0.00 27.14 3.41
3079 3213 9.569167 TTCTTGTCTTACATTTGTCTAGATACG 57.431 33.333 0.00 0.00 0.00 3.06
3080 3214 8.188799 TCTTGTCTTACATTTGTCTAGATACGG 58.811 37.037 0.00 0.00 0.00 4.02
3081 3215 7.634671 TGTCTTACATTTGTCTAGATACGGA 57.365 36.000 0.00 0.00 0.00 4.69
3082 3216 8.234136 TGTCTTACATTTGTCTAGATACGGAT 57.766 34.615 0.00 0.00 0.00 4.18
3083 3217 8.135529 TGTCTTACATTTGTCTAGATACGGATG 58.864 37.037 0.00 0.85 0.00 3.51
3084 3218 8.136165 GTCTTACATTTGTCTAGATACGGATGT 58.864 37.037 13.29 13.29 34.19 3.06
3085 3219 9.346005 TCTTACATTTGTCTAGATACGGATGTA 57.654 33.333 11.94 11.94 32.86 2.29
3102 3236 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
3103 3237 8.623903 ACGGATGTATCTAATACTAAAACGTGA 58.376 33.333 0.00 0.00 36.70 4.35
3104 3238 8.899776 CGGATGTATCTAATACTAAAACGTGAC 58.100 37.037 0.00 0.00 36.70 3.67
3105 3239 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
3115 3249 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
3116 3250 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
3117 3251 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
3118 3252 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
3119 3253 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
3135 3269 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
3136 3270 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
3137 3271 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
3138 3272 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
3139 3273 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
3140 3274 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
3147 3281 8.034058 AGACAAATCTAAGACAAGAATTTCGG 57.966 34.615 0.00 0.00 31.46 4.30
3148 3282 7.119846 AGACAAATCTAAGACAAGAATTTCGGG 59.880 37.037 0.00 0.00 31.46 5.14
3149 3283 6.940298 ACAAATCTAAGACAAGAATTTCGGGA 59.060 34.615 0.00 0.00 0.00 5.14
3150 3284 6.986904 AATCTAAGACAAGAATTTCGGGAC 57.013 37.500 0.00 0.00 0.00 4.46
3171 3305 3.117776 ACGGAGGGAGTAGTTTGGTTTTT 60.118 43.478 0.00 0.00 0.00 1.94
3355 3491 3.780054 CGAACACTTCCGAAACTAAACG 58.220 45.455 0.00 0.00 0.00 3.60
3380 3516 6.920758 GTCTGTTATGTTAATGCACACCAAAA 59.079 34.615 0.00 0.00 0.00 2.44
3648 3792 2.419667 GGCCGCTGAACTTTAGTGTTA 58.580 47.619 0.00 0.00 0.00 2.41
3934 4079 7.456902 AGGATAACAAGGAGGTAAGAGTTAACA 59.543 37.037 8.61 0.00 0.00 2.41
3955 4100 3.914426 TCCTCTTATTCCCAAGCTGTC 57.086 47.619 0.00 0.00 0.00 3.51
3956 4101 3.181329 TCCTCTTATTCCCAAGCTGTCA 58.819 45.455 0.00 0.00 0.00 3.58
4051 4196 7.017055 GCAAATTTATGAAACTTGGTTGCATC 58.983 34.615 7.10 0.00 40.57 3.91
4063 4208 0.460987 GTTGCATCGAGGACTCAGGG 60.461 60.000 0.00 0.00 0.00 4.45
4066 4211 0.179097 GCATCGAGGACTCAGGGAAC 60.179 60.000 0.00 0.00 0.00 3.62
4105 4250 1.459450 TGCTGCGGTTTTATTCCTCC 58.541 50.000 0.00 0.00 0.00 4.30
4305 4454 5.820131 TGATTTTCTGTTGTGCTACAGTTG 58.180 37.500 12.05 0.00 44.62 3.16
4316 4465 2.224523 TGCTACAGTTGGCTTAAGCTGT 60.225 45.455 25.88 22.55 43.55 4.40
4693 4849 2.945668 GGCTAACATGGAAAGGTAGCTG 59.054 50.000 9.75 0.00 0.00 4.24
4703 4859 3.561313 GGAAAGGTAGCTGGATGGTTCAA 60.561 47.826 0.00 0.00 0.00 2.69
4752 4908 2.680841 GTGCAGTTGTTGTCCTAACACA 59.319 45.455 0.00 0.00 34.35 3.72
4753 4909 2.680841 TGCAGTTGTTGTCCTAACACAC 59.319 45.455 0.00 0.00 34.35 3.82
4754 4910 2.032924 GCAGTTGTTGTCCTAACACACC 59.967 50.000 0.00 0.00 34.35 4.16
4756 4912 3.560068 CAGTTGTTGTCCTAACACACCTC 59.440 47.826 0.00 0.00 34.35 3.85
4757 4913 3.454812 AGTTGTTGTCCTAACACACCTCT 59.545 43.478 0.00 0.00 34.35 3.69
4758 4914 4.080526 AGTTGTTGTCCTAACACACCTCTT 60.081 41.667 0.00 0.00 34.35 2.85
4759 4915 4.067972 TGTTGTCCTAACACACCTCTTC 57.932 45.455 0.00 0.00 34.35 2.87
4760 4916 3.452990 TGTTGTCCTAACACACCTCTTCA 59.547 43.478 0.00 0.00 34.35 3.02
4761 4917 4.080807 TGTTGTCCTAACACACCTCTTCAA 60.081 41.667 0.00 0.00 34.35 2.69
4762 4918 4.067972 TGTCCTAACACACCTCTTCAAC 57.932 45.455 0.00 0.00 0.00 3.18
4763 4919 3.709653 TGTCCTAACACACCTCTTCAACT 59.290 43.478 0.00 0.00 0.00 3.16
4764 4920 4.163458 TGTCCTAACACACCTCTTCAACTT 59.837 41.667 0.00 0.00 0.00 2.66
4765 4921 4.511826 GTCCTAACACACCTCTTCAACTTG 59.488 45.833 0.00 0.00 0.00 3.16
4766 4922 4.407621 TCCTAACACACCTCTTCAACTTGA 59.592 41.667 0.00 0.00 0.00 3.02
4767 4923 5.071788 TCCTAACACACCTCTTCAACTTGAT 59.928 40.000 0.00 0.00 0.00 2.57
4768 4924 6.269077 TCCTAACACACCTCTTCAACTTGATA 59.731 38.462 0.00 0.00 0.00 2.15
4891 5047 5.187186 TCAAGGACTTGAGTGTAAGATACCC 59.813 44.000 10.52 0.00 43.90 3.69
4982 5196 1.509644 CTGCTTGCAAGAACGAGCCA 61.510 55.000 30.39 14.66 45.08 4.75
5048 5262 2.264455 GCCCTGATCTCCAGTGGATAT 58.736 52.381 13.56 11.44 41.33 1.63
5077 5292 9.809395 TGTAAGTACAAGATACCTATATGCTCT 57.191 33.333 0.00 0.00 32.40 4.09
5092 5307 3.057969 TGCTCTCGTTCATGGTCAATT 57.942 42.857 0.00 0.00 0.00 2.32
5133 5352 4.176271 GGCCTAATGATTGTTGCTTTGTC 58.824 43.478 0.00 0.00 0.00 3.18
5223 5442 2.416260 GGTAGATCCGGCACCGAC 59.584 66.667 11.42 0.00 42.83 4.79
5338 5557 7.130099 TGACCCATGGAGAGATTAGTTAGTTA 58.870 38.462 15.22 0.00 0.00 2.24
5481 5702 6.715280 TGAGCTCCAGAATCTTTTGTTATCT 58.285 36.000 12.15 0.00 0.00 1.98
5501 5722 8.914011 GTTATCTCCCAAGGCTAAATTTTGTAT 58.086 33.333 0.00 0.00 0.00 2.29
5502 5723 7.978099 ATCTCCCAAGGCTAAATTTTGTATT 57.022 32.000 0.00 0.00 0.00 1.89
5503 5724 7.169158 TCTCCCAAGGCTAAATTTTGTATTG 57.831 36.000 0.00 4.30 0.00 1.90
5583 5804 4.981806 TTCATGCATTTTACCTGCCTAC 57.018 40.909 0.00 0.00 38.89 3.18
5638 5859 6.647481 TGATGCGTAGTGTATACAAAAACTGT 59.353 34.615 7.25 0.00 42.47 3.55
5639 5860 6.456447 TGCGTAGTGTATACAAAAACTGTC 57.544 37.500 7.25 0.00 39.64 3.51
5641 5862 6.647481 TGCGTAGTGTATACAAAAACTGTCAT 59.353 34.615 7.25 0.00 39.64 3.06
5642 5863 6.953743 GCGTAGTGTATACAAAAACTGTCATG 59.046 38.462 7.25 0.00 39.64 3.07
5643 5864 7.453034 CGTAGTGTATACAAAAACTGTCATGG 58.547 38.462 7.25 0.00 39.64 3.66
5645 5866 6.003950 AGTGTATACAAAAACTGTCATGGCT 58.996 36.000 7.25 0.00 39.64 4.75
5646 5867 7.165485 AGTGTATACAAAAACTGTCATGGCTA 58.835 34.615 7.25 0.00 39.64 3.93
5647 5868 7.829211 AGTGTATACAAAAACTGTCATGGCTAT 59.171 33.333 7.25 0.00 39.64 2.97
5700 5930 3.536956 TCTTCGTGAACTCCAGTTTGT 57.463 42.857 0.00 0.00 38.56 2.83
5701 5931 4.659111 TCTTCGTGAACTCCAGTTTGTA 57.341 40.909 0.00 0.00 38.56 2.41
5702 5932 4.365723 TCTTCGTGAACTCCAGTTTGTAC 58.634 43.478 0.00 0.00 38.56 2.90
5703 5933 4.098960 TCTTCGTGAACTCCAGTTTGTACT 59.901 41.667 0.00 0.00 38.56 2.73
5711 5941 3.299050 CAGTTTGTACTGCACGGGA 57.701 52.632 0.00 0.00 44.81 5.14
5712 5942 1.148310 CAGTTTGTACTGCACGGGAG 58.852 55.000 0.00 0.00 44.81 4.30
5713 5943 0.602905 AGTTTGTACTGCACGGGAGC 60.603 55.000 0.00 0.00 31.99 4.70
5714 5944 1.302192 TTTGTACTGCACGGGAGCC 60.302 57.895 0.00 0.00 0.00 4.70
5715 5945 1.764571 TTTGTACTGCACGGGAGCCT 61.765 55.000 0.00 0.00 0.00 4.58
5716 5946 0.901114 TTGTACTGCACGGGAGCCTA 60.901 55.000 0.00 0.00 0.00 3.93
5717 5947 1.141234 GTACTGCACGGGAGCCTAC 59.859 63.158 0.00 0.00 0.00 3.18
5718 5948 1.000019 TACTGCACGGGAGCCTACT 60.000 57.895 0.00 0.00 0.00 2.57
5719 5949 0.613853 TACTGCACGGGAGCCTACTT 60.614 55.000 0.00 0.00 0.00 2.24
5720 5950 1.448540 CTGCACGGGAGCCTACTTG 60.449 63.158 0.00 0.00 0.00 3.16
5721 5951 2.172483 CTGCACGGGAGCCTACTTGT 62.172 60.000 0.00 0.00 0.00 3.16
5786 6016 1.505898 GTATTTGTTGTACGTGCGCG 58.494 50.000 19.78 19.78 44.93 6.86
5814 6086 5.278957 GCACTCCTGTGGATTGTTAACAAAT 60.279 40.000 23.97 12.91 43.97 2.32
5841 6113 6.623486 TCTGAACAATTGCCATGAAATACTG 58.377 36.000 5.05 0.00 0.00 2.74
5845 6117 5.957798 ACAATTGCCATGAAATACTGACTG 58.042 37.500 5.05 0.00 0.00 3.51
5859 6131 2.874701 ACTGACTGTGATCACTTGCAAC 59.125 45.455 25.55 11.78 0.00 4.17
5914 6187 5.276461 AGTGACACAGTTCATAACAGACA 57.724 39.130 8.59 0.00 0.00 3.41
5951 6224 3.211288 CTGAGTAGGACAGCCCGG 58.789 66.667 0.00 0.00 40.87 5.73
5952 6225 1.682684 CTGAGTAGGACAGCCCGGT 60.683 63.158 0.00 0.00 40.87 5.28
5953 6226 1.229082 TGAGTAGGACAGCCCGGTT 60.229 57.895 0.00 0.00 40.87 4.44
5954 6227 1.255667 TGAGTAGGACAGCCCGGTTC 61.256 60.000 0.00 0.00 40.87 3.62
5955 6228 0.971447 GAGTAGGACAGCCCGGTTCT 60.971 60.000 0.00 0.00 40.87 3.01
5956 6229 0.333993 AGTAGGACAGCCCGGTTCTA 59.666 55.000 0.00 0.00 40.87 2.10
5957 6230 1.063114 AGTAGGACAGCCCGGTTCTAT 60.063 52.381 0.00 0.00 40.87 1.98
5958 6231 1.340568 GTAGGACAGCCCGGTTCTATC 59.659 57.143 0.00 0.00 40.87 2.08
5959 6232 0.325296 AGGACAGCCCGGTTCTATCA 60.325 55.000 0.00 0.00 40.87 2.15
5960 6233 0.759346 GGACAGCCCGGTTCTATCAT 59.241 55.000 0.00 0.00 0.00 2.45
5961 6234 1.541233 GGACAGCCCGGTTCTATCATG 60.541 57.143 0.00 0.00 0.00 3.07
5962 6235 1.412710 GACAGCCCGGTTCTATCATGA 59.587 52.381 0.00 0.00 0.00 3.07
5963 6236 1.139058 ACAGCCCGGTTCTATCATGAC 59.861 52.381 0.00 0.00 0.00 3.06
5964 6237 1.138859 CAGCCCGGTTCTATCATGACA 59.861 52.381 0.00 0.00 0.00 3.58
5965 6238 1.414181 AGCCCGGTTCTATCATGACAG 59.586 52.381 0.00 0.00 0.00 3.51
5966 6239 1.412710 GCCCGGTTCTATCATGACAGA 59.587 52.381 0.00 0.00 0.00 3.41
5967 6240 2.158957 GCCCGGTTCTATCATGACAGAA 60.159 50.000 12.42 12.42 0.00 3.02
5968 6241 3.722147 CCCGGTTCTATCATGACAGAAG 58.278 50.000 16.65 6.36 31.62 2.85
5969 6242 3.133003 CCCGGTTCTATCATGACAGAAGT 59.867 47.826 16.65 0.00 31.62 3.01
5970 6243 4.115516 CCGGTTCTATCATGACAGAAGTG 58.884 47.826 16.65 11.55 31.62 3.16
5971 6244 4.142160 CCGGTTCTATCATGACAGAAGTGA 60.142 45.833 16.65 0.00 31.62 3.41
5972 6245 4.800993 CGGTTCTATCATGACAGAAGTGAC 59.199 45.833 16.65 5.88 31.62 3.67
5973 6246 5.622233 CGGTTCTATCATGACAGAAGTGACA 60.622 44.000 16.65 0.00 31.62 3.58
5974 6247 5.578727 GGTTCTATCATGACAGAAGTGACAC 59.421 44.000 16.65 4.80 31.62 3.67
5975 6248 5.982890 TCTATCATGACAGAAGTGACACA 57.017 39.130 0.00 0.00 30.95 3.72
5976 6249 5.958955 TCTATCATGACAGAAGTGACACAG 58.041 41.667 0.00 0.00 30.95 3.66
5977 6250 4.613925 ATCATGACAGAAGTGACACAGT 57.386 40.909 8.59 0.56 30.95 3.55
5978 6251 4.406648 TCATGACAGAAGTGACACAGTT 57.593 40.909 8.59 0.00 30.95 3.16
5979 6252 4.371786 TCATGACAGAAGTGACACAGTTC 58.628 43.478 8.59 10.24 42.27 3.01
5980 6253 3.885724 TGACAGAAGTGACACAGTTCA 57.114 42.857 17.61 0.24 43.80 3.18
5981 6254 4.406648 TGACAGAAGTGACACAGTTCAT 57.593 40.909 17.61 8.30 43.80 2.57
5982 6255 5.529581 TGACAGAAGTGACACAGTTCATA 57.470 39.130 17.61 2.97 43.80 2.15
5983 6256 5.912892 TGACAGAAGTGACACAGTTCATAA 58.087 37.500 17.61 1.20 43.80 1.90
5984 6257 5.753438 TGACAGAAGTGACACAGTTCATAAC 59.247 40.000 17.61 9.08 43.80 1.89
5985 6258 5.670485 ACAGAAGTGACACAGTTCATAACA 58.330 37.500 17.61 0.00 43.80 2.41
5986 6259 5.755375 ACAGAAGTGACACAGTTCATAACAG 59.245 40.000 17.61 6.36 43.80 3.16
5987 6260 5.985530 CAGAAGTGACACAGTTCATAACAGA 59.014 40.000 17.61 0.00 43.80 3.41
5988 6261 5.986135 AGAAGTGACACAGTTCATAACAGAC 59.014 40.000 17.61 0.00 43.80 3.51
5989 6262 5.276461 AGTGACACAGTTCATAACAGACA 57.724 39.130 8.59 0.00 0.00 3.41
5990 6263 5.670485 AGTGACACAGTTCATAACAGACAA 58.330 37.500 8.59 0.00 0.00 3.18
5991 6264 6.112734 AGTGACACAGTTCATAACAGACAAA 58.887 36.000 8.59 0.00 0.00 2.83
5992 6265 6.037172 AGTGACACAGTTCATAACAGACAAAC 59.963 38.462 8.59 0.00 0.00 2.93
5993 6266 5.877564 TGACACAGTTCATAACAGACAAACA 59.122 36.000 0.00 0.00 0.00 2.83
5994 6267 6.372937 TGACACAGTTCATAACAGACAAACAA 59.627 34.615 0.00 0.00 0.00 2.83
5995 6268 7.094592 TGACACAGTTCATAACAGACAAACAAA 60.095 33.333 0.00 0.00 0.00 2.83
5996 6269 7.250569 ACACAGTTCATAACAGACAAACAAAG 58.749 34.615 0.00 0.00 0.00 2.77
5997 6270 7.120579 ACACAGTTCATAACAGACAAACAAAGA 59.879 33.333 0.00 0.00 0.00 2.52
5998 6271 8.131100 CACAGTTCATAACAGACAAACAAAGAT 58.869 33.333 0.00 0.00 0.00 2.40
5999 6272 8.131100 ACAGTTCATAACAGACAAACAAAGATG 58.869 33.333 0.00 0.00 0.00 2.90
6000 6273 8.344831 CAGTTCATAACAGACAAACAAAGATGA 58.655 33.333 0.00 0.00 0.00 2.92
6001 6274 9.071276 AGTTCATAACAGACAAACAAAGATGAT 57.929 29.630 0.00 0.00 0.00 2.45
6002 6275 9.121517 GTTCATAACAGACAAACAAAGATGATG 57.878 33.333 0.00 0.00 0.00 3.07
6003 6276 7.307694 TCATAACAGACAAACAAAGATGATGC 58.692 34.615 0.00 0.00 0.00 3.91
6004 6277 5.779529 AACAGACAAACAAAGATGATGCT 57.220 34.783 0.00 0.00 0.00 3.79
6005 6278 6.882610 AACAGACAAACAAAGATGATGCTA 57.117 33.333 0.00 0.00 0.00 3.49
6006 6279 6.882610 ACAGACAAACAAAGATGATGCTAA 57.117 33.333 0.00 0.00 0.00 3.09
6007 6280 7.275888 ACAGACAAACAAAGATGATGCTAAA 57.724 32.000 0.00 0.00 0.00 1.85
6008 6281 7.365741 ACAGACAAACAAAGATGATGCTAAAG 58.634 34.615 0.00 0.00 0.00 1.85
6009 6282 6.307318 CAGACAAACAAAGATGATGCTAAAGC 59.693 38.462 0.00 0.00 42.50 3.51
6010 6283 6.208204 AGACAAACAAAGATGATGCTAAAGCT 59.792 34.615 3.26 0.00 42.66 3.74
6011 6284 6.154445 ACAAACAAAGATGATGCTAAAGCTG 58.846 36.000 3.26 0.00 42.66 4.24
6012 6285 6.016024 ACAAACAAAGATGATGCTAAAGCTGA 60.016 34.615 3.26 0.00 42.66 4.26
6013 6286 5.814764 ACAAAGATGATGCTAAAGCTGAG 57.185 39.130 3.26 0.00 42.66 3.35
6014 6287 5.251764 ACAAAGATGATGCTAAAGCTGAGT 58.748 37.500 3.26 0.00 42.66 3.41
6015 6288 6.409704 ACAAAGATGATGCTAAAGCTGAGTA 58.590 36.000 3.26 0.00 42.66 2.59
6016 6289 6.538021 ACAAAGATGATGCTAAAGCTGAGTAG 59.462 38.462 3.26 0.00 42.66 2.57
6017 6290 5.212532 AGATGATGCTAAAGCTGAGTAGG 57.787 43.478 3.26 0.00 42.66 3.18
6018 6291 4.898265 AGATGATGCTAAAGCTGAGTAGGA 59.102 41.667 3.26 0.00 42.66 2.94
6019 6292 4.392921 TGATGCTAAAGCTGAGTAGGAC 57.607 45.455 3.26 0.00 42.66 3.85
6020 6293 3.769300 TGATGCTAAAGCTGAGTAGGACA 59.231 43.478 3.26 0.00 42.66 4.02
6021 6294 3.876274 TGCTAAAGCTGAGTAGGACAG 57.124 47.619 3.26 0.00 42.66 3.51
6044 6317 4.350245 CCCGGTTCTATCATATACTCCCA 58.650 47.826 0.00 0.00 0.00 4.37
6051 6324 7.259161 GTTCTATCATATACTCCCATCCGTTC 58.741 42.308 0.00 0.00 0.00 3.95
6055 6328 5.262009 TCATATACTCCCATCCGTTCCTAG 58.738 45.833 0.00 0.00 0.00 3.02
6062 6335 5.607171 ACTCCCATCCGTTCCTAGATATTTT 59.393 40.000 0.00 0.00 0.00 1.82
6068 6341 8.560374 CCATCCGTTCCTAGATATTTTTCTTTC 58.440 37.037 0.00 0.00 0.00 2.62
6069 6342 9.331282 CATCCGTTCCTAGATATTTTTCTTTCT 57.669 33.333 0.00 0.00 0.00 2.52
6070 6343 8.943909 TCCGTTCCTAGATATTTTTCTTTCTC 57.056 34.615 0.00 0.00 0.00 2.87
6086 6359 9.840427 TTTTCTTTCTCGATAATCCATTTGAAC 57.160 29.630 0.00 0.00 0.00 3.18
6087 6360 8.560355 TTCTTTCTCGATAATCCATTTGAACA 57.440 30.769 0.00 0.00 0.00 3.18
6088 6361 7.974675 TCTTTCTCGATAATCCATTTGAACAC 58.025 34.615 0.00 0.00 0.00 3.32
6089 6362 7.824289 TCTTTCTCGATAATCCATTTGAACACT 59.176 33.333 0.00 0.00 0.00 3.55
6090 6363 7.539712 TTCTCGATAATCCATTTGAACACTC 57.460 36.000 0.00 0.00 0.00 3.51
6091 6364 6.878317 TCTCGATAATCCATTTGAACACTCT 58.122 36.000 0.00 0.00 0.00 3.24
6092 6365 6.980978 TCTCGATAATCCATTTGAACACTCTC 59.019 38.462 0.00 0.00 0.00 3.20
6093 6366 6.639563 TCGATAATCCATTTGAACACTCTCA 58.360 36.000 0.00 0.00 0.00 3.27
6094 6367 6.535150 TCGATAATCCATTTGAACACTCTCAC 59.465 38.462 0.00 0.00 0.00 3.51
6095 6368 6.313658 CGATAATCCATTTGAACACTCTCACA 59.686 38.462 0.00 0.00 0.00 3.58
6096 6369 5.695851 AATCCATTTGAACACTCTCACAC 57.304 39.130 0.00 0.00 0.00 3.82
6097 6370 4.149511 TCCATTTGAACACTCTCACACA 57.850 40.909 0.00 0.00 0.00 3.72
6098 6371 3.876914 TCCATTTGAACACTCTCACACAC 59.123 43.478 0.00 0.00 0.00 3.82
6099 6372 3.627123 CCATTTGAACACTCTCACACACA 59.373 43.478 0.00 0.00 0.00 3.72
6100 6373 4.096231 CCATTTGAACACTCTCACACACAA 59.904 41.667 0.00 0.00 0.00 3.33
6101 6374 4.678509 TTTGAACACTCTCACACACAAC 57.321 40.909 0.00 0.00 0.00 3.32
6102 6375 2.627945 TGAACACTCTCACACACAACC 58.372 47.619 0.00 0.00 0.00 3.77
6103 6376 2.027653 TGAACACTCTCACACACAACCA 60.028 45.455 0.00 0.00 0.00 3.67
6104 6377 2.779755 ACACTCTCACACACAACCAA 57.220 45.000 0.00 0.00 0.00 3.67
6105 6378 2.356135 ACACTCTCACACACAACCAAC 58.644 47.619 0.00 0.00 0.00 3.77
6106 6379 2.290008 ACACTCTCACACACAACCAACA 60.290 45.455 0.00 0.00 0.00 3.33
6107 6380 2.746904 CACTCTCACACACAACCAACAA 59.253 45.455 0.00 0.00 0.00 2.83
6108 6381 3.190327 CACTCTCACACACAACCAACAAA 59.810 43.478 0.00 0.00 0.00 2.83
6109 6382 4.016444 ACTCTCACACACAACCAACAAAT 58.984 39.130 0.00 0.00 0.00 2.32
6110 6383 4.142403 ACTCTCACACACAACCAACAAATG 60.142 41.667 0.00 0.00 0.00 2.32
6111 6384 4.013050 TCTCACACACAACCAACAAATGA 58.987 39.130 0.00 0.00 0.00 2.57
6112 6385 4.103365 TCACACACAACCAACAAATGAC 57.897 40.909 0.00 0.00 0.00 3.06
6113 6386 3.761218 TCACACACAACCAACAAATGACT 59.239 39.130 0.00 0.00 0.00 3.41
6114 6387 4.944317 TCACACACAACCAACAAATGACTA 59.056 37.500 0.00 0.00 0.00 2.59
6115 6388 5.416013 TCACACACAACCAACAAATGACTAA 59.584 36.000 0.00 0.00 0.00 2.24
6116 6389 6.071896 TCACACACAACCAACAAATGACTAAA 60.072 34.615 0.00 0.00 0.00 1.85
6117 6390 6.756074 CACACACAACCAACAAATGACTAAAT 59.244 34.615 0.00 0.00 0.00 1.40
6118 6391 7.918033 CACACACAACCAACAAATGACTAAATA 59.082 33.333 0.00 0.00 0.00 1.40
6119 6392 7.918562 ACACACAACCAACAAATGACTAAATAC 59.081 33.333 0.00 0.00 0.00 1.89
6185 6458 6.833041 ACATCCGTATGTGGTAATCCATTTA 58.167 36.000 0.00 0.00 44.79 1.40
6186 6459 6.934645 ACATCCGTATGTGGTAATCCATTTAG 59.065 38.462 0.00 0.00 44.79 1.85
6191 6464 6.759356 CGTATGTGGTAATCCATTTAGACACA 59.241 38.462 0.00 0.00 46.20 3.72
6238 6515 1.576421 CTCGGGCACAAAAGCACTC 59.424 57.895 0.00 0.00 35.21 3.51
6241 6518 1.447317 CGGGCACAAAAGCACTCTGT 61.447 55.000 0.00 0.00 35.21 3.41
6245 6522 2.454055 GCACAAAAGCACTCTGTTCAC 58.546 47.619 0.00 0.00 0.00 3.18
6247 6524 3.428045 GCACAAAAGCACTCTGTTCACTT 60.428 43.478 0.00 0.00 0.00 3.16
6262 6540 5.741011 TGTTCACTTACACAAGGATATCCC 58.259 41.667 18.56 0.54 35.97 3.85
6303 6581 6.209391 GGATTGGGGATTACACATCTTATTGG 59.791 42.308 0.00 0.00 0.00 3.16
6304 6582 4.469657 TGGGGATTACACATCTTATTGGC 58.530 43.478 0.00 0.00 0.00 4.52
6305 6583 4.167892 TGGGGATTACACATCTTATTGGCT 59.832 41.667 0.00 0.00 0.00 4.75
6306 6584 4.520492 GGGGATTACACATCTTATTGGCTG 59.480 45.833 0.00 0.00 0.00 4.85
6307 6585 4.520492 GGGATTACACATCTTATTGGCTGG 59.480 45.833 0.00 0.00 0.00 4.85
6308 6586 4.520492 GGATTACACATCTTATTGGCTGGG 59.480 45.833 0.00 0.00 0.00 4.45
6309 6587 4.584638 TTACACATCTTATTGGCTGGGT 57.415 40.909 0.00 0.00 0.00 4.51
6310 6588 5.702065 TTACACATCTTATTGGCTGGGTA 57.298 39.130 0.00 0.00 0.00 3.69
6311 6589 3.886123 ACACATCTTATTGGCTGGGTAC 58.114 45.455 0.00 0.00 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.923121 TGTGGAGAATTAGATGCCAGC 58.077 47.619 0.00 0.00 0.00 4.85
20 21 4.070716 GGATGTGGAGAATTAGATGCCAG 58.929 47.826 0.00 0.00 0.00 4.85
52 53 1.262640 ACGACCGTAATGGCCTCCTT 61.263 55.000 3.32 0.00 43.94 3.36
53 54 0.396139 TACGACCGTAATGGCCTCCT 60.396 55.000 3.32 0.00 43.94 3.69
89 90 1.001597 CCGCGACTGAGGTACTATTCC 60.002 57.143 8.23 0.00 41.55 3.01
102 103 3.812019 CAGCCTACGACCGCGACT 61.812 66.667 8.23 0.00 41.64 4.18
111 112 3.188786 GAGCGCCAACAGCCTACG 61.189 66.667 2.29 0.00 38.78 3.51
123 124 2.689766 GTCACGTTCATCGAGCGC 59.310 61.111 0.00 0.00 39.75 5.92
124 125 2.158959 GGGTCACGTTCATCGAGCG 61.159 63.158 0.00 0.00 41.73 5.03
125 126 1.078759 CAGGGTCACGTTCATCGAGC 61.079 60.000 0.00 0.00 42.86 5.03
126 127 0.243907 ACAGGGTCACGTTCATCGAG 59.756 55.000 0.00 0.00 42.86 4.04
127 128 0.038618 CACAGGGTCACGTTCATCGA 60.039 55.000 0.00 0.00 42.86 3.59
128 129 1.014044 CCACAGGGTCACGTTCATCG 61.014 60.000 0.00 0.00 46.00 3.84
129 130 0.320374 TCCACAGGGTCACGTTCATC 59.680 55.000 0.00 0.00 34.93 2.92
130 131 0.984230 ATCCACAGGGTCACGTTCAT 59.016 50.000 0.00 0.00 34.93 2.57
131 132 0.034756 CATCCACAGGGTCACGTTCA 59.965 55.000 0.00 0.00 34.93 3.18
132 133 0.034896 ACATCCACAGGGTCACGTTC 59.965 55.000 0.00 0.00 34.93 3.95
133 134 0.472471 AACATCCACAGGGTCACGTT 59.528 50.000 0.00 0.00 34.93 3.99
134 135 0.250295 CAACATCCACAGGGTCACGT 60.250 55.000 0.00 0.00 34.93 4.49
135 136 0.250295 ACAACATCCACAGGGTCACG 60.250 55.000 0.00 0.00 34.93 4.35
136 137 1.981256 AACAACATCCACAGGGTCAC 58.019 50.000 0.00 0.00 34.93 3.67
137 138 2.582052 GAAACAACATCCACAGGGTCA 58.418 47.619 0.00 0.00 34.93 4.02
138 139 1.535462 CGAAACAACATCCACAGGGTC 59.465 52.381 0.00 0.00 34.93 4.46
139 140 1.604604 CGAAACAACATCCACAGGGT 58.395 50.000 0.00 0.00 34.93 4.34
140 141 0.240945 GCGAAACAACATCCACAGGG 59.759 55.000 0.00 0.00 0.00 4.45
141 142 0.110238 CGCGAAACAACATCCACAGG 60.110 55.000 0.00 0.00 0.00 4.00
142 143 0.110238 CCGCGAAACAACATCCACAG 60.110 55.000 8.23 0.00 0.00 3.66
143 144 0.816018 ACCGCGAAACAACATCCACA 60.816 50.000 8.23 0.00 0.00 4.17
144 145 1.149987 TACCGCGAAACAACATCCAC 58.850 50.000 8.23 0.00 0.00 4.02
145 146 1.735018 CATACCGCGAAACAACATCCA 59.265 47.619 8.23 0.00 0.00 3.41
146 147 1.531058 GCATACCGCGAAACAACATCC 60.531 52.381 8.23 0.00 0.00 3.51
147 148 1.531058 GGCATACCGCGAAACAACATC 60.531 52.381 8.23 0.00 43.84 3.06
148 149 0.450184 GGCATACCGCGAAACAACAT 59.550 50.000 8.23 0.00 43.84 2.71
149 150 0.885150 TGGCATACCGCGAAACAACA 60.885 50.000 8.23 0.00 43.84 3.33
150 151 0.450184 ATGGCATACCGCGAAACAAC 59.550 50.000 8.23 0.00 43.84 3.32
151 152 1.666700 GTATGGCATACCGCGAAACAA 59.333 47.619 24.03 0.00 43.84 2.83
152 153 1.292061 GTATGGCATACCGCGAAACA 58.708 50.000 24.03 0.00 43.84 2.83
153 154 0.584876 GGTATGGCATACCGCGAAAC 59.415 55.000 34.14 14.76 45.20 2.78
154 155 2.994990 GGTATGGCATACCGCGAAA 58.005 52.632 34.14 0.00 45.20 3.46
155 156 4.762825 GGTATGGCATACCGCGAA 57.237 55.556 34.14 0.00 45.20 4.70
161 162 0.250901 CCAGCTGGGGTATGGCATAC 60.251 60.000 26.14 25.92 35.00 2.39
162 163 0.697511 ACCAGCTGGGGTATGGCATA 60.698 55.000 35.42 2.32 40.07 3.14
163 164 1.583784 AACCAGCTGGGGTATGGCAT 61.584 55.000 35.42 9.41 41.32 4.40
164 165 2.237965 AACCAGCTGGGGTATGGCA 61.238 57.895 35.42 0.00 41.32 4.92
165 166 1.754234 CAACCAGCTGGGGTATGGC 60.754 63.158 35.42 0.00 41.32 4.40
166 167 1.076777 CCAACCAGCTGGGGTATGG 60.077 63.158 35.42 29.45 41.32 2.74
167 168 4.664062 CCAACCAGCTGGGGTATG 57.336 61.111 35.42 25.46 41.32 2.39
173 174 4.722700 CGACCCCCAACCAGCTGG 62.723 72.222 31.60 31.60 42.17 4.85
174 175 4.722700 CCGACCCCCAACCAGCTG 62.723 72.222 6.78 6.78 0.00 4.24
177 178 2.824880 TTCACCGACCCCCAACCAG 61.825 63.158 0.00 0.00 0.00 4.00
178 179 2.773053 TTCACCGACCCCCAACCA 60.773 61.111 0.00 0.00 0.00 3.67
179 180 2.281970 GTTCACCGACCCCCAACC 60.282 66.667 0.00 0.00 0.00 3.77
180 181 1.074248 ATGTTCACCGACCCCCAAC 59.926 57.895 0.00 0.00 0.00 3.77
181 182 1.074072 CATGTTCACCGACCCCCAA 59.926 57.895 0.00 0.00 0.00 4.12
182 183 1.843832 TCATGTTCACCGACCCCCA 60.844 57.895 0.00 0.00 0.00 4.96
183 184 1.376812 GTCATGTTCACCGACCCCC 60.377 63.158 0.00 0.00 0.00 5.40
184 185 1.376812 GGTCATGTTCACCGACCCC 60.377 63.158 10.39 0.00 42.87 4.95
185 186 4.296265 GGTCATGTTCACCGACCC 57.704 61.111 10.39 0.00 42.87 4.46
187 188 0.038526 ACGAGGTCATGTTCACCGAC 60.039 55.000 0.00 0.00 39.13 4.79
188 189 0.677288 AACGAGGTCATGTTCACCGA 59.323 50.000 0.00 0.00 39.13 4.69
189 190 0.790207 CAACGAGGTCATGTTCACCG 59.210 55.000 0.00 0.00 39.13 4.94
190 191 2.163818 TCAACGAGGTCATGTTCACC 57.836 50.000 0.00 0.00 0.00 4.02
191 192 2.159653 GCATCAACGAGGTCATGTTCAC 60.160 50.000 0.00 0.00 0.00 3.18
192 193 2.076100 GCATCAACGAGGTCATGTTCA 58.924 47.619 0.00 0.00 0.00 3.18
193 194 1.398390 GGCATCAACGAGGTCATGTTC 59.602 52.381 0.00 0.00 0.00 3.18
194 195 1.271325 TGGCATCAACGAGGTCATGTT 60.271 47.619 0.00 0.00 0.00 2.71
195 196 0.324614 TGGCATCAACGAGGTCATGT 59.675 50.000 0.00 0.00 0.00 3.21
196 197 1.600957 GATGGCATCAACGAGGTCATG 59.399 52.381 22.23 0.00 38.78 3.07
197 198 1.475751 GGATGGCATCAACGAGGTCAT 60.476 52.381 27.39 0.00 41.36 3.06
198 199 0.107703 GGATGGCATCAACGAGGTCA 60.108 55.000 27.39 0.00 31.24 4.02
199 200 0.815615 GGGATGGCATCAACGAGGTC 60.816 60.000 27.39 8.49 0.00 3.85
200 201 1.224592 GGGATGGCATCAACGAGGT 59.775 57.895 27.39 0.00 0.00 3.85
201 202 1.097547 GTGGGATGGCATCAACGAGG 61.098 60.000 27.39 0.00 0.00 4.63
202 203 1.097547 GGTGGGATGGCATCAACGAG 61.098 60.000 27.39 0.00 0.00 4.18
203 204 1.077787 GGTGGGATGGCATCAACGA 60.078 57.895 27.39 7.05 0.00 3.85
204 205 1.378382 TGGTGGGATGGCATCAACG 60.378 57.895 27.39 0.00 0.00 4.10
205 206 0.611618 TGTGGTGGGATGGCATCAAC 60.612 55.000 27.39 22.72 0.00 3.18
206 207 0.323633 CTGTGGTGGGATGGCATCAA 60.324 55.000 27.39 13.33 0.00 2.57
207 208 1.303948 CTGTGGTGGGATGGCATCA 59.696 57.895 27.39 7.30 0.00 3.07
208 209 2.123428 GCTGTGGTGGGATGGCATC 61.123 63.158 19.23 19.23 0.00 3.91
209 210 2.043652 GCTGTGGTGGGATGGCAT 60.044 61.111 0.00 0.00 0.00 4.40
210 211 4.365111 GGCTGTGGTGGGATGGCA 62.365 66.667 0.00 0.00 0.00 4.92
212 213 4.802051 CCGGCTGTGGTGGGATGG 62.802 72.222 0.00 0.00 0.00 3.51
226 227 2.721971 ATTCATCTAGCGCCAGCCGG 62.722 60.000 2.29 0.00 46.67 6.13
238 239 2.103263 GGCGGTGAGGTTCTATTCATCT 59.897 50.000 0.00 0.00 0.00 2.90
245 246 0.325296 ATGGAGGCGGTGAGGTTCTA 60.325 55.000 0.00 0.00 0.00 2.10
261 262 4.598894 CTCTCTCGCGGGGCATGG 62.599 72.222 5.94 0.00 0.00 3.66
290 291 2.760385 GGTCACTCCCCTCCCTCG 60.760 72.222 0.00 0.00 0.00 4.63
330 340 2.032054 CGGCGTTAACGACCTATGTCTA 59.968 50.000 31.03 0.00 46.52 2.59
331 341 1.202222 CGGCGTTAACGACCTATGTCT 60.202 52.381 31.03 0.00 46.52 3.41
336 346 1.640210 TACGCGGCGTTAACGACCTA 61.640 55.000 33.98 13.54 46.52 3.08
340 350 1.511887 GACTACGCGGCGTTAACGA 60.512 57.895 33.98 14.20 41.54 3.85
373 383 7.065803 CACGTTTTAACATGACTAATCCCTCAT 59.934 37.037 0.00 0.00 0.00 2.90
381 391 5.986741 TCTGAGCACGTTTTAACATGACTAA 59.013 36.000 0.00 0.00 0.00 2.24
391 401 7.623506 GCTTAGCTATTTTCTGAGCACGTTTTA 60.624 37.037 6.48 0.00 41.22 1.52
449 459 2.798834 ACGATTCGTGGTATTTTGCG 57.201 45.000 11.56 0.00 39.18 4.85
457 467 7.542534 TTAGCATAATTTTACGATTCGTGGT 57.457 32.000 21.40 9.93 41.39 4.16
461 471 8.211838 TCACGATTAGCATAATTTTACGATTCG 58.788 33.333 4.14 4.14 0.00 3.34
466 476 8.272866 TCATGTCACGATTAGCATAATTTTACG 58.727 33.333 0.00 0.00 0.00 3.18
467 477 9.929722 TTCATGTCACGATTAGCATAATTTTAC 57.070 29.630 0.00 0.00 0.00 2.01
496 506 2.946329 AGTAAAATGCACACAACCGTCA 59.054 40.909 0.00 0.00 0.00 4.35
655 668 2.665185 AGGCTGTTTGTCCGACGC 60.665 61.111 0.00 0.00 0.00 5.19
774 787 1.534203 GGGAGGATTCTGGAAGGGC 59.466 63.158 0.00 0.00 0.00 5.19
826 844 1.138228 GTGGAGGGTGGGTTTAGGGT 61.138 60.000 0.00 0.00 0.00 4.34
926 949 0.107897 TTGGTCGTTCGGATGGATGG 60.108 55.000 0.00 0.00 0.00 3.51
927 950 1.006832 GTTGGTCGTTCGGATGGATG 58.993 55.000 0.00 0.00 0.00 3.51
928 951 0.107848 GGTTGGTCGTTCGGATGGAT 60.108 55.000 0.00 0.00 0.00 3.41
929 952 1.294138 GGTTGGTCGTTCGGATGGA 59.706 57.895 0.00 0.00 0.00 3.41
978 1022 4.838486 GAGGCAGACGGCGTCGAG 62.838 72.222 31.59 27.60 46.17 4.04
984 1028 3.474570 ATGGGAGAGGCAGACGGC 61.475 66.667 0.00 0.00 43.74 5.68
985 1029 2.503061 CATGGGAGAGGCAGACGG 59.497 66.667 0.00 0.00 0.00 4.79
986 1030 2.503061 CCATGGGAGAGGCAGACG 59.497 66.667 2.85 0.00 0.00 4.18
1262 1330 5.512404 CCAACCAGATGTTACACAAGGACTA 60.512 44.000 5.92 0.00 34.69 2.59
1300 1369 3.206150 TCGCCTCCTAAATCAAATGCTC 58.794 45.455 0.00 0.00 0.00 4.26
1301 1370 3.118261 TCTCGCCTCCTAAATCAAATGCT 60.118 43.478 0.00 0.00 0.00 3.79
1302 1371 3.002759 GTCTCGCCTCCTAAATCAAATGC 59.997 47.826 0.00 0.00 0.00 3.56
1303 1372 3.246226 CGTCTCGCCTCCTAAATCAAATG 59.754 47.826 0.00 0.00 0.00 2.32
1304 1373 3.132289 TCGTCTCGCCTCCTAAATCAAAT 59.868 43.478 0.00 0.00 0.00 2.32
1305 1374 2.494471 TCGTCTCGCCTCCTAAATCAAA 59.506 45.455 0.00 0.00 0.00 2.69
1311 1381 1.078918 TCGTCGTCTCGCCTCCTAA 60.079 57.895 0.00 0.00 0.00 2.69
1432 1514 3.884037 ATCCTGGAACTGTCAAAACCT 57.116 42.857 0.00 0.00 0.00 3.50
1434 1516 4.243007 CCAATCCTGGAACTGTCAAAAC 57.757 45.455 0.00 0.00 46.92 2.43
1497 1579 5.100259 GCTGTGAACAATCAAATCCATCAG 58.900 41.667 0.00 0.00 37.30 2.90
1559 1641 2.495270 TGATGAGCAGAAGACTGACCTC 59.505 50.000 0.00 0.00 46.03 3.85
1594 1676 7.930325 TCAGCAGAGATTCTAATAATGGTTCAG 59.070 37.037 0.00 0.00 0.00 3.02
1642 1730 3.215151 TCGCATTACTGGGTGAAAACAA 58.785 40.909 0.00 0.00 36.72 2.83
1798 1886 5.808042 TTGATGATTGAACTGCTAAGCTC 57.192 39.130 0.00 0.00 0.00 4.09
1804 1892 7.991460 TCTATCAGAATTGATGATTGAACTGCT 59.009 33.333 7.79 0.00 43.76 4.24
1839 1927 5.641209 CCAAAACAATAGGTCTGAGACTGAG 59.359 44.000 12.92 1.57 32.47 3.35
2155 2244 5.677319 TCCATCCAATAGATATTCCGTCC 57.323 43.478 0.00 0.00 32.37 4.79
2156 2245 6.644347 ACATCCATCCAATAGATATTCCGTC 58.356 40.000 0.00 0.00 32.37 4.79
2157 2246 6.627087 ACATCCATCCAATAGATATTCCGT 57.373 37.500 0.00 0.00 32.37 4.69
2158 2247 6.183360 GCAACATCCATCCAATAGATATTCCG 60.183 42.308 0.00 0.00 32.37 4.30
2159 2248 6.888632 AGCAACATCCATCCAATAGATATTCC 59.111 38.462 0.00 0.00 32.37 3.01
2177 2266 2.629137 TCCTCAAAACATGCAGCAACAT 59.371 40.909 0.00 0.00 0.00 2.71
2215 2336 2.031245 TGGCTTGCAAAACAGATGTACG 60.031 45.455 0.00 0.00 0.00 3.67
2462 2585 9.482175 AGTCATGTTAGGACTTATCTTACTCTT 57.518 33.333 0.00 0.00 42.77 2.85
2464 2587 9.127277 AGAGTCATGTTAGGACTTATCTTACTC 57.873 37.037 0.00 0.00 45.21 2.59
2465 2588 9.482175 AAGAGTCATGTTAGGACTTATCTTACT 57.518 33.333 0.00 0.00 45.21 2.24
2469 2592 9.482175 AGTTAAGAGTCATGTTAGGACTTATCT 57.518 33.333 0.00 0.00 45.21 1.98
3032 3166 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
3033 3167 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
3034 3168 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3035 3169 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
3036 3170 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
3037 3171 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
3038 3172 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
3039 3173 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
3040 3174 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
3041 3175 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
3042 3176 4.517453 TGTAAGACAAGAATTTTGGGACGG 59.483 41.667 0.00 0.00 0.00 4.79
3043 3177 5.682943 TGTAAGACAAGAATTTTGGGACG 57.317 39.130 5.68 0.00 0.00 4.79
3044 3178 7.926018 ACAAATGTAAGACAAGAATTTTGGGAC 59.074 33.333 7.26 0.00 31.16 4.46
3045 3179 8.017418 ACAAATGTAAGACAAGAATTTTGGGA 57.983 30.769 7.26 0.00 31.16 4.37
3046 3180 8.143835 AGACAAATGTAAGACAAGAATTTTGGG 58.856 33.333 7.26 0.00 31.16 4.12
3053 3187 9.569167 CGTATCTAGACAAATGTAAGACAAGAA 57.431 33.333 0.00 0.00 0.00 2.52
3054 3188 8.188799 CCGTATCTAGACAAATGTAAGACAAGA 58.811 37.037 0.00 0.00 0.00 3.02
3055 3189 8.188799 TCCGTATCTAGACAAATGTAAGACAAG 58.811 37.037 0.00 0.00 0.00 3.16
3056 3190 8.058667 TCCGTATCTAGACAAATGTAAGACAA 57.941 34.615 0.00 0.00 0.00 3.18
3057 3191 7.634671 TCCGTATCTAGACAAATGTAAGACA 57.365 36.000 0.00 0.00 0.00 3.41
3058 3192 8.136165 ACATCCGTATCTAGACAAATGTAAGAC 58.864 37.037 0.00 0.00 0.00 3.01
3059 3193 8.234136 ACATCCGTATCTAGACAAATGTAAGA 57.766 34.615 0.00 1.82 0.00 2.10
3076 3210 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
3077 3211 8.623903 TCACGTTTTAGTATTAGATACATCCGT 58.376 33.333 0.00 0.00 38.21 4.69
3078 3212 8.899776 GTCACGTTTTAGTATTAGATACATCCG 58.100 37.037 0.00 0.00 38.21 4.18
3079 3213 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
3089 3223 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
3090 3224 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
3091 3225 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
3092 3226 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
3093 3227 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
3094 3228 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
3095 3229 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
3096 3230 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
3097 3231 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
3098 3232 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
3109 3243 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
3110 3244 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
3111 3245 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
3112 3246 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
3113 3247 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
3114 3248 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
3121 3255 9.151471 CCGAAATTCTTGTCTTAGATTTGTCTA 57.849 33.333 0.00 0.00 0.00 2.59
3122 3256 7.119846 CCCGAAATTCTTGTCTTAGATTTGTCT 59.880 37.037 0.00 0.00 0.00 3.41
3123 3257 7.119262 TCCCGAAATTCTTGTCTTAGATTTGTC 59.881 37.037 0.00 0.00 0.00 3.18
3124 3258 6.940298 TCCCGAAATTCTTGTCTTAGATTTGT 59.060 34.615 0.00 0.00 0.00 2.83
3125 3259 7.244192 GTCCCGAAATTCTTGTCTTAGATTTG 58.756 38.462 0.00 0.00 0.00 2.32
3126 3260 6.092259 CGTCCCGAAATTCTTGTCTTAGATTT 59.908 38.462 0.00 0.00 0.00 2.17
3127 3261 5.581085 CGTCCCGAAATTCTTGTCTTAGATT 59.419 40.000 0.00 0.00 0.00 2.40
3128 3262 5.109903 CGTCCCGAAATTCTTGTCTTAGAT 58.890 41.667 0.00 0.00 0.00 1.98
3129 3263 4.491676 CGTCCCGAAATTCTTGTCTTAGA 58.508 43.478 0.00 0.00 0.00 2.10
3130 3264 3.617263 CCGTCCCGAAATTCTTGTCTTAG 59.383 47.826 0.00 0.00 0.00 2.18
3131 3265 3.258872 TCCGTCCCGAAATTCTTGTCTTA 59.741 43.478 0.00 0.00 0.00 2.10
3132 3266 2.038033 TCCGTCCCGAAATTCTTGTCTT 59.962 45.455 0.00 0.00 0.00 3.01
3133 3267 1.621814 TCCGTCCCGAAATTCTTGTCT 59.378 47.619 0.00 0.00 0.00 3.41
3134 3268 2.000447 CTCCGTCCCGAAATTCTTGTC 59.000 52.381 0.00 0.00 0.00 3.18
3135 3269 1.338769 CCTCCGTCCCGAAATTCTTGT 60.339 52.381 0.00 0.00 0.00 3.16
3136 3270 1.369625 CCTCCGTCCCGAAATTCTTG 58.630 55.000 0.00 0.00 0.00 3.02
3137 3271 0.252197 CCCTCCGTCCCGAAATTCTT 59.748 55.000 0.00 0.00 0.00 2.52
3138 3272 0.616679 TCCCTCCGTCCCGAAATTCT 60.617 55.000 0.00 0.00 0.00 2.40
3139 3273 0.179081 CTCCCTCCGTCCCGAAATTC 60.179 60.000 0.00 0.00 0.00 2.17
3140 3274 0.908180 ACTCCCTCCGTCCCGAAATT 60.908 55.000 0.00 0.00 0.00 1.82
3141 3275 0.032813 TACTCCCTCCGTCCCGAAAT 60.033 55.000 0.00 0.00 0.00 2.17
3142 3276 0.682209 CTACTCCCTCCGTCCCGAAA 60.682 60.000 0.00 0.00 0.00 3.46
3143 3277 1.077212 CTACTCCCTCCGTCCCGAA 60.077 63.158 0.00 0.00 0.00 4.30
3144 3278 1.856539 AACTACTCCCTCCGTCCCGA 61.857 60.000 0.00 0.00 0.00 5.14
3145 3279 0.969409 AAACTACTCCCTCCGTCCCG 60.969 60.000 0.00 0.00 0.00 5.14
3146 3280 0.535797 CAAACTACTCCCTCCGTCCC 59.464 60.000 0.00 0.00 0.00 4.46
3147 3281 0.535797 CCAAACTACTCCCTCCGTCC 59.464 60.000 0.00 0.00 0.00 4.79
3148 3282 1.264295 ACCAAACTACTCCCTCCGTC 58.736 55.000 0.00 0.00 0.00 4.79
3149 3283 1.725803 AACCAAACTACTCCCTCCGT 58.274 50.000 0.00 0.00 0.00 4.69
3150 3284 2.853235 AAACCAAACTACTCCCTCCG 57.147 50.000 0.00 0.00 0.00 4.63
3355 3491 5.621197 TGGTGTGCATTAACATAACAGAC 57.379 39.130 0.00 0.00 31.49 3.51
3380 3516 4.635324 CCCTGTTTGCAACAAAAGTCAATT 59.365 37.500 0.00 0.00 41.61 2.32
3491 3635 5.836024 AAACCCTCTTGACATACAACCTA 57.164 39.130 0.00 0.00 34.56 3.08
3648 3792 0.548682 ACCTGGGGAACTGCAGAGAT 60.549 55.000 23.35 5.87 0.00 2.75
3934 4079 3.782523 TGACAGCTTGGGAATAAGAGGAT 59.217 43.478 0.00 0.00 0.00 3.24
3955 4100 2.749076 TCAAGACAAGCCCGATGAAATG 59.251 45.455 0.00 0.00 0.00 2.32
3956 4101 3.071874 TCAAGACAAGCCCGATGAAAT 57.928 42.857 0.00 0.00 0.00 2.17
4051 4196 0.612174 TCTGGTTCCCTGAGTCCTCG 60.612 60.000 0.00 0.00 0.00 4.63
4063 4208 2.563427 GCAAGGCGCTTCTGGTTC 59.437 61.111 7.64 0.00 37.77 3.62
4105 4250 9.410556 AGACTTATCAAATCCGTTTCATTTTTG 57.589 29.630 0.00 0.00 0.00 2.44
4305 4454 6.442513 AATGAAATAGTGACAGCTTAAGCC 57.557 37.500 23.71 9.44 43.38 4.35
4341 4490 5.541845 TCATCAATCGGCTCAATAAGGTAG 58.458 41.667 0.00 0.00 0.00 3.18
4350 4499 1.069204 GCTACCTCATCAATCGGCTCA 59.931 52.381 0.00 0.00 0.00 4.26
4693 4849 3.963129 TGGGTAAGTGATTGAACCATCC 58.037 45.455 0.00 0.00 33.46 3.51
4725 4881 1.069906 GGACAACAACTGCACGCTTAG 60.070 52.381 0.00 0.00 0.00 2.18
4752 4908 6.328672 AGCCTATCATATCAAGTTGAAGAGGT 59.671 38.462 10.14 1.46 34.15 3.85
4753 4909 6.767456 AGCCTATCATATCAAGTTGAAGAGG 58.233 40.000 10.14 10.29 34.49 3.69
4754 4910 9.941325 ATAAGCCTATCATATCAAGTTGAAGAG 57.059 33.333 10.14 0.00 0.00 2.85
4756 4912 9.716531 TCATAAGCCTATCATATCAAGTTGAAG 57.283 33.333 10.14 1.29 0.00 3.02
4790 4946 1.195448 CTTGATGTGTCACCAAGCGTC 59.805 52.381 8.47 0.00 33.11 5.19
4982 5196 1.188219 TCTTGGCTTCGGTGCTCTCT 61.188 55.000 1.12 0.00 0.00 3.10
5077 5292 9.942850 ATATGTATCATAATTGACCATGAACGA 57.057 29.630 0.00 0.00 34.96 3.85
5092 5307 3.181490 GGCCACGAGCGATATGTATCATA 60.181 47.826 0.00 0.00 45.17 2.15
5133 5352 1.732917 CGCTGGACTCTCAGGCTAG 59.267 63.158 0.00 0.00 34.53 3.42
5190 5409 4.883354 CCCCATCTCCCGCCAAGC 62.883 72.222 0.00 0.00 0.00 4.01
5223 5442 1.817099 GGCATTGGTCTCAGCCTCG 60.817 63.158 0.00 0.00 43.70 4.63
5256 5475 1.071228 ACCTCCGTTACAACACCTTCC 59.929 52.381 0.00 0.00 0.00 3.46
5481 5702 6.019748 TCCAATACAAAATTTAGCCTTGGGA 58.980 36.000 16.34 6.83 34.14 4.37
5543 5764 9.620660 TGCATGAAACATACGTATATAGTACAG 57.379 33.333 7.96 0.00 0.00 2.74
5638 5859 6.324770 TGACACAAGATAGAGAATAGCCATGA 59.675 38.462 0.00 0.00 0.00 3.07
5639 5860 6.519382 TGACACAAGATAGAGAATAGCCATG 58.481 40.000 0.00 0.00 0.00 3.66
5641 5862 6.544928 TTGACACAAGATAGAGAATAGCCA 57.455 37.500 0.00 0.00 0.00 4.75
5642 5863 7.497249 ACAATTGACACAAGATAGAGAATAGCC 59.503 37.037 13.59 0.00 0.00 3.93
5643 5864 8.430801 ACAATTGACACAAGATAGAGAATAGC 57.569 34.615 13.59 0.00 0.00 2.97
5646 5867 8.890718 CATGACAATTGACACAAGATAGAGAAT 58.109 33.333 13.59 0.00 0.00 2.40
5647 5868 7.335171 CCATGACAATTGACACAAGATAGAGAA 59.665 37.037 13.59 0.00 0.00 2.87
5695 5925 1.574702 GGCTCCCGTGCAGTACAAAC 61.575 60.000 0.00 0.00 34.04 2.93
5696 5926 1.302192 GGCTCCCGTGCAGTACAAA 60.302 57.895 0.00 0.00 34.04 2.83
5697 5927 0.901114 TAGGCTCCCGTGCAGTACAA 60.901 55.000 0.00 0.00 34.04 2.41
5698 5928 1.304630 TAGGCTCCCGTGCAGTACA 60.305 57.895 0.00 0.00 34.04 2.90
5699 5929 1.141234 GTAGGCTCCCGTGCAGTAC 59.859 63.158 0.00 0.00 34.04 2.73
5700 5930 0.613853 AAGTAGGCTCCCGTGCAGTA 60.614 55.000 0.00 0.00 34.04 2.74
5701 5931 1.913762 AAGTAGGCTCCCGTGCAGT 60.914 57.895 0.00 0.00 34.04 4.40
5702 5932 1.448540 CAAGTAGGCTCCCGTGCAG 60.449 63.158 0.00 0.00 34.04 4.41
5703 5933 2.214216 ACAAGTAGGCTCCCGTGCA 61.214 57.895 0.00 0.00 34.04 4.57
5704 5934 1.741770 CACAAGTAGGCTCCCGTGC 60.742 63.158 0.00 0.00 0.00 5.34
5705 5935 0.670546 CACACAAGTAGGCTCCCGTG 60.671 60.000 0.00 0.00 0.00 4.94
5706 5936 1.671742 CACACAAGTAGGCTCCCGT 59.328 57.895 0.00 0.00 0.00 5.28
5707 5937 1.741770 GCACACAAGTAGGCTCCCG 60.742 63.158 0.00 0.00 0.00 5.14
5708 5938 1.741770 CGCACACAAGTAGGCTCCC 60.742 63.158 0.00 0.00 0.00 4.30
5709 5939 2.391389 GCGCACACAAGTAGGCTCC 61.391 63.158 0.30 0.00 0.00 4.70
5710 5940 1.374758 AGCGCACACAAGTAGGCTC 60.375 57.895 11.47 0.00 32.04 4.70
5711 5941 1.669115 CAGCGCACACAAGTAGGCT 60.669 57.895 11.47 0.00 36.31 4.58
5712 5942 2.680913 CCAGCGCACACAAGTAGGC 61.681 63.158 11.47 0.00 0.00 3.93
5713 5943 2.034879 CCCAGCGCACACAAGTAGG 61.035 63.158 11.47 0.00 0.00 3.18
5714 5944 2.680913 GCCCAGCGCACACAAGTAG 61.681 63.158 11.47 0.00 37.47 2.57
5715 5945 2.668212 GCCCAGCGCACACAAGTA 60.668 61.111 11.47 0.00 37.47 2.24
5767 5997 1.505898 CGCGCACGTACAACAAATAC 58.494 50.000 8.75 0.00 33.53 1.89
5786 6016 1.661341 CAATCCACAGGAGTGCTAGC 58.339 55.000 8.10 8.10 40.84 3.42
5814 6086 8.149647 AGTATTTCATGGCAATTGTTCAGAAAA 58.850 29.630 7.40 10.30 0.00 2.29
5841 6113 1.537202 GGGTTGCAAGTGATCACAGTC 59.463 52.381 27.02 14.89 0.00 3.51
5845 6117 1.541588 GAAGGGGTTGCAAGTGATCAC 59.458 52.381 18.47 18.47 0.00 3.06
5859 6131 2.081462 GTTGTCCGTAACATGAAGGGG 58.919 52.381 0.00 0.00 37.82 4.79
5914 6187 6.208204 ACTCAGCTTTAGCATCATCTTTGTTT 59.792 34.615 4.33 0.00 45.16 2.83
5947 6220 3.133003 ACTTCTGTCATGATAGAACCGGG 59.867 47.826 25.79 19.37 34.33 5.73
5948 6221 4.115516 CACTTCTGTCATGATAGAACCGG 58.884 47.826 25.79 19.66 34.33 5.28
5949 6222 4.800993 GTCACTTCTGTCATGATAGAACCG 59.199 45.833 25.79 20.23 34.33 4.44
5950 6223 5.578727 GTGTCACTTCTGTCATGATAGAACC 59.421 44.000 25.79 15.92 34.33 3.62
5951 6224 6.159293 TGTGTCACTTCTGTCATGATAGAAC 58.841 40.000 25.79 18.81 34.33 3.01
5952 6225 6.015095 ACTGTGTCACTTCTGTCATGATAGAA 60.015 38.462 27.11 27.11 36.42 2.10
5953 6226 5.478332 ACTGTGTCACTTCTGTCATGATAGA 59.522 40.000 17.34 17.34 0.00 1.98
5954 6227 5.718146 ACTGTGTCACTTCTGTCATGATAG 58.282 41.667 12.97 12.97 0.00 2.08
5955 6228 5.728637 ACTGTGTCACTTCTGTCATGATA 57.271 39.130 0.00 0.00 0.00 2.15
5956 6229 4.613925 ACTGTGTCACTTCTGTCATGAT 57.386 40.909 0.00 0.00 0.00 2.45
5957 6230 4.141959 TGAACTGTGTCACTTCTGTCATGA 60.142 41.667 4.27 0.00 0.00 3.07
5958 6231 4.122046 TGAACTGTGTCACTTCTGTCATG 58.878 43.478 4.27 0.00 0.00 3.07
5959 6232 4.406648 TGAACTGTGTCACTTCTGTCAT 57.593 40.909 4.27 0.00 0.00 3.06
5960 6233 3.885724 TGAACTGTGTCACTTCTGTCA 57.114 42.857 4.27 0.00 0.00 3.58
5961 6234 5.753438 TGTTATGAACTGTGTCACTTCTGTC 59.247 40.000 4.27 0.00 0.00 3.51
5962 6235 5.670485 TGTTATGAACTGTGTCACTTCTGT 58.330 37.500 4.27 0.00 0.00 3.41
5963 6236 5.985530 TCTGTTATGAACTGTGTCACTTCTG 59.014 40.000 4.27 0.00 0.00 3.02
5964 6237 5.986135 GTCTGTTATGAACTGTGTCACTTCT 59.014 40.000 4.27 0.00 0.00 2.85
5965 6238 5.753438 TGTCTGTTATGAACTGTGTCACTTC 59.247 40.000 4.27 1.44 0.00 3.01
5966 6239 5.670485 TGTCTGTTATGAACTGTGTCACTT 58.330 37.500 4.27 0.00 0.00 3.16
5967 6240 5.276461 TGTCTGTTATGAACTGTGTCACT 57.724 39.130 4.27 0.00 0.00 3.41
5968 6241 5.984233 TTGTCTGTTATGAACTGTGTCAC 57.016 39.130 0.00 0.00 0.00 3.67
5969 6242 5.877564 TGTTTGTCTGTTATGAACTGTGTCA 59.122 36.000 0.00 0.00 0.00 3.58
5970 6243 6.358118 TGTTTGTCTGTTATGAACTGTGTC 57.642 37.500 0.00 0.00 0.00 3.67
5971 6244 6.751514 TTGTTTGTCTGTTATGAACTGTGT 57.248 33.333 0.00 0.00 0.00 3.72
5972 6245 7.471721 TCTTTGTTTGTCTGTTATGAACTGTG 58.528 34.615 0.00 0.00 0.00 3.66
5973 6246 7.624360 TCTTTGTTTGTCTGTTATGAACTGT 57.376 32.000 0.00 0.00 0.00 3.55
5974 6247 8.344831 TCATCTTTGTTTGTCTGTTATGAACTG 58.655 33.333 0.00 0.00 0.00 3.16
5975 6248 8.450578 TCATCTTTGTTTGTCTGTTATGAACT 57.549 30.769 0.00 0.00 0.00 3.01
5976 6249 9.121517 CATCATCTTTGTTTGTCTGTTATGAAC 57.878 33.333 0.00 0.00 0.00 3.18
5977 6250 7.809331 GCATCATCTTTGTTTGTCTGTTATGAA 59.191 33.333 0.00 0.00 0.00 2.57
5978 6251 7.175467 AGCATCATCTTTGTTTGTCTGTTATGA 59.825 33.333 0.00 0.00 0.00 2.15
5979 6252 7.310664 AGCATCATCTTTGTTTGTCTGTTATG 58.689 34.615 0.00 0.00 0.00 1.90
5980 6253 7.458409 AGCATCATCTTTGTTTGTCTGTTAT 57.542 32.000 0.00 0.00 0.00 1.89
5981 6254 6.882610 AGCATCATCTTTGTTTGTCTGTTA 57.117 33.333 0.00 0.00 0.00 2.41
5982 6255 5.779529 AGCATCATCTTTGTTTGTCTGTT 57.220 34.783 0.00 0.00 0.00 3.16
5983 6256 6.882610 TTAGCATCATCTTTGTTTGTCTGT 57.117 33.333 0.00 0.00 0.00 3.41
5984 6257 6.307318 GCTTTAGCATCATCTTTGTTTGTCTG 59.693 38.462 0.00 0.00 41.59 3.51
5985 6258 6.208204 AGCTTTAGCATCATCTTTGTTTGTCT 59.792 34.615 4.33 0.00 45.16 3.41
5986 6259 6.307318 CAGCTTTAGCATCATCTTTGTTTGTC 59.693 38.462 4.33 0.00 45.16 3.18
5987 6260 6.016024 TCAGCTTTAGCATCATCTTTGTTTGT 60.016 34.615 4.33 0.00 45.16 2.83
5988 6261 6.384224 TCAGCTTTAGCATCATCTTTGTTTG 58.616 36.000 4.33 0.00 45.16 2.93
5989 6262 6.208204 ACTCAGCTTTAGCATCATCTTTGTTT 59.792 34.615 4.33 0.00 45.16 2.83
5990 6263 5.709164 ACTCAGCTTTAGCATCATCTTTGTT 59.291 36.000 4.33 0.00 45.16 2.83
5991 6264 5.251764 ACTCAGCTTTAGCATCATCTTTGT 58.748 37.500 4.33 0.00 45.16 2.83
5992 6265 5.814764 ACTCAGCTTTAGCATCATCTTTG 57.185 39.130 4.33 0.00 45.16 2.77
5993 6266 6.054295 CCTACTCAGCTTTAGCATCATCTTT 58.946 40.000 4.33 0.00 45.16 2.52
5994 6267 5.365025 TCCTACTCAGCTTTAGCATCATCTT 59.635 40.000 4.33 0.00 45.16 2.40
5995 6268 4.898265 TCCTACTCAGCTTTAGCATCATCT 59.102 41.667 4.33 0.00 45.16 2.90
5996 6269 4.987912 GTCCTACTCAGCTTTAGCATCATC 59.012 45.833 4.33 0.00 45.16 2.92
5997 6270 4.406972 TGTCCTACTCAGCTTTAGCATCAT 59.593 41.667 4.33 0.00 45.16 2.45
5998 6271 3.769300 TGTCCTACTCAGCTTTAGCATCA 59.231 43.478 4.33 0.00 45.16 3.07
5999 6272 4.367450 CTGTCCTACTCAGCTTTAGCATC 58.633 47.826 4.33 0.00 45.16 3.91
6000 6273 4.399004 CTGTCCTACTCAGCTTTAGCAT 57.601 45.455 4.33 0.00 45.16 3.79
6001 6274 3.876274 CTGTCCTACTCAGCTTTAGCA 57.124 47.619 4.33 0.00 45.16 3.49
6009 6282 1.258445 AACCGGGCTGTCCTACTCAG 61.258 60.000 6.32 0.00 36.18 3.35
6010 6283 1.229082 AACCGGGCTGTCCTACTCA 60.229 57.895 6.32 0.00 0.00 3.41
6011 6284 0.971447 AGAACCGGGCTGTCCTACTC 60.971 60.000 6.32 0.00 0.00 2.59
6012 6285 0.333993 TAGAACCGGGCTGTCCTACT 59.666 55.000 6.32 0.00 0.00 2.57
6013 6286 1.340568 GATAGAACCGGGCTGTCCTAC 59.659 57.143 6.32 0.00 0.00 3.18
6014 6287 1.063492 TGATAGAACCGGGCTGTCCTA 60.063 52.381 16.74 5.42 0.00 2.94
6015 6288 0.325296 TGATAGAACCGGGCTGTCCT 60.325 55.000 16.74 3.64 0.00 3.85
6016 6289 0.759346 ATGATAGAACCGGGCTGTCC 59.241 55.000 16.74 0.00 0.00 4.02
6017 6290 3.963428 ATATGATAGAACCGGGCTGTC 57.037 47.619 6.32 11.27 0.00 3.51
6018 6291 4.417437 AGTATATGATAGAACCGGGCTGT 58.583 43.478 6.32 0.00 0.00 4.40
6019 6292 4.142138 GGAGTATATGATAGAACCGGGCTG 60.142 50.000 6.32 0.00 0.00 4.85
6020 6293 4.024670 GGAGTATATGATAGAACCGGGCT 58.975 47.826 6.32 5.20 0.00 5.19
6021 6294 3.132467 GGGAGTATATGATAGAACCGGGC 59.868 52.174 6.32 0.00 0.00 6.13
6022 6295 4.350245 TGGGAGTATATGATAGAACCGGG 58.650 47.826 6.32 0.00 0.00 5.73
6044 6317 9.549078 GAGAAAGAAAAATATCTAGGAACGGAT 57.451 33.333 0.00 0.00 0.00 4.18
6062 6335 8.450964 GTGTTCAAATGGATTATCGAGAAAGAA 58.549 33.333 0.00 0.00 0.00 2.52
6068 6341 6.758416 TGAGAGTGTTCAAATGGATTATCGAG 59.242 38.462 0.00 0.00 0.00 4.04
6069 6342 6.535150 GTGAGAGTGTTCAAATGGATTATCGA 59.465 38.462 0.00 0.00 0.00 3.59
6070 6343 6.313658 TGTGAGAGTGTTCAAATGGATTATCG 59.686 38.462 0.00 0.00 0.00 2.92
6074 6347 5.009010 GTGTGTGAGAGTGTTCAAATGGATT 59.991 40.000 0.00 0.00 0.00 3.01
6075 6348 4.516698 GTGTGTGAGAGTGTTCAAATGGAT 59.483 41.667 0.00 0.00 0.00 3.41
6076 6349 3.876914 GTGTGTGAGAGTGTTCAAATGGA 59.123 43.478 0.00 0.00 0.00 3.41
6077 6350 3.627123 TGTGTGTGAGAGTGTTCAAATGG 59.373 43.478 0.00 0.00 0.00 3.16
6078 6351 4.880886 TGTGTGTGAGAGTGTTCAAATG 57.119 40.909 0.00 0.00 0.00 2.32
6079 6352 4.096382 GGTTGTGTGTGAGAGTGTTCAAAT 59.904 41.667 0.00 0.00 0.00 2.32
6080 6353 3.438781 GGTTGTGTGTGAGAGTGTTCAAA 59.561 43.478 0.00 0.00 0.00 2.69
6081 6354 3.006940 GGTTGTGTGTGAGAGTGTTCAA 58.993 45.455 0.00 0.00 0.00 2.69
6082 6355 2.027653 TGGTTGTGTGTGAGAGTGTTCA 60.028 45.455 0.00 0.00 0.00 3.18
6083 6356 2.627945 TGGTTGTGTGTGAGAGTGTTC 58.372 47.619 0.00 0.00 0.00 3.18
6084 6357 2.747446 GTTGGTTGTGTGTGAGAGTGTT 59.253 45.455 0.00 0.00 0.00 3.32
6085 6358 2.290008 TGTTGGTTGTGTGTGAGAGTGT 60.290 45.455 0.00 0.00 0.00 3.55
6086 6359 2.355197 TGTTGGTTGTGTGTGAGAGTG 58.645 47.619 0.00 0.00 0.00 3.51
6087 6360 2.779755 TGTTGGTTGTGTGTGAGAGT 57.220 45.000 0.00 0.00 0.00 3.24
6088 6361 4.096231 TCATTTGTTGGTTGTGTGTGAGAG 59.904 41.667 0.00 0.00 0.00 3.20
6089 6362 4.013050 TCATTTGTTGGTTGTGTGTGAGA 58.987 39.130 0.00 0.00 0.00 3.27
6090 6363 4.104776 GTCATTTGTTGGTTGTGTGTGAG 58.895 43.478 0.00 0.00 0.00 3.51
6091 6364 3.761218 AGTCATTTGTTGGTTGTGTGTGA 59.239 39.130 0.00 0.00 0.00 3.58
6092 6365 4.108699 AGTCATTTGTTGGTTGTGTGTG 57.891 40.909 0.00 0.00 0.00 3.82
6093 6366 5.906113 TTAGTCATTTGTTGGTTGTGTGT 57.094 34.783 0.00 0.00 0.00 3.72
6094 6367 7.112844 CGTATTTAGTCATTTGTTGGTTGTGTG 59.887 37.037 0.00 0.00 0.00 3.82
6095 6368 7.012515 TCGTATTTAGTCATTTGTTGGTTGTGT 59.987 33.333 0.00 0.00 0.00 3.72
6096 6369 7.356540 TCGTATTTAGTCATTTGTTGGTTGTG 58.643 34.615 0.00 0.00 0.00 3.33
6097 6370 7.499321 TCGTATTTAGTCATTTGTTGGTTGT 57.501 32.000 0.00 0.00 0.00 3.32
6098 6371 7.060633 GCTTCGTATTTAGTCATTTGTTGGTTG 59.939 37.037 0.00 0.00 0.00 3.77
6099 6372 7.081976 GCTTCGTATTTAGTCATTTGTTGGTT 58.918 34.615 0.00 0.00 0.00 3.67
6100 6373 6.205853 TGCTTCGTATTTAGTCATTTGTTGGT 59.794 34.615 0.00 0.00 0.00 3.67
6101 6374 6.607689 TGCTTCGTATTTAGTCATTTGTTGG 58.392 36.000 0.00 0.00 0.00 3.77
6102 6375 8.500837 TTTGCTTCGTATTTAGTCATTTGTTG 57.499 30.769 0.00 0.00 0.00 3.33
6103 6376 9.691362 ATTTTGCTTCGTATTTAGTCATTTGTT 57.309 25.926 0.00 0.00 0.00 2.83
6118 6391 9.216117 AGTGTAGATTTACTTATTTTGCTTCGT 57.784 29.630 0.00 0.00 0.00 3.85
6119 6392 9.690434 GAGTGTAGATTTACTTATTTTGCTTCG 57.310 33.333 0.00 0.00 0.00 3.79
6156 6429 8.826293 TGGATTACCACATACGGATGTATATA 57.174 34.615 14.23 3.33 44.82 0.86
6157 6430 7.727578 TGGATTACCACATACGGATGTATAT 57.272 36.000 14.23 4.37 44.82 0.86
6174 6447 9.906660 TTTTGATTGTGTGTCTAAATGGATTAC 57.093 29.630 0.00 0.00 0.00 1.89
6209 6486 4.615815 GCCCGAGCGCCTGATCAT 62.616 66.667 2.29 0.00 0.00 2.45
6238 6515 5.817816 GGGATATCCTTGTGTAAGTGAACAG 59.182 44.000 21.18 0.00 35.95 3.16
6241 6518 4.165372 GGGGGATATCCTTGTGTAAGTGAA 59.835 45.833 21.18 0.00 35.95 3.18
6245 6522 2.038557 CCGGGGGATATCCTTGTGTAAG 59.961 54.545 21.18 4.97 35.95 2.34
6247 6524 1.061967 ACCGGGGGATATCCTTGTGTA 60.062 52.381 21.18 0.00 35.95 2.90
6262 6540 2.687935 CAATCCACCTTTCAATACCGGG 59.312 50.000 6.32 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.