Multiple sequence alignment - TraesCS5B01G241900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G241900 chr5B 100.000 2812 0 0 1 2812 421644483 421647294 0.000000e+00 5193.0
1 TraesCS5B01G241900 chr5B 88.321 137 15 1 2570 2705 334496152 334496016 2.240000e-36 163.0
2 TraesCS5B01G241900 chr5B 95.000 60 2 1 2191 2249 432174791 432174732 2.980000e-15 93.5
3 TraesCS5B01G241900 chr5B 91.379 58 5 0 2712 2769 421646944 421647001 2.320000e-11 80.5
4 TraesCS5B01G241900 chr5B 91.379 58 5 0 2462 2519 421647194 421647251 2.320000e-11 80.5
5 TraesCS5B01G241900 chr5A 87.867 1500 114 35 708 2168 458202461 458203931 0.000000e+00 1700.0
6 TraesCS5B01G241900 chr5A 93.057 1181 48 16 976 2149 456034326 456033173 0.000000e+00 1696.0
7 TraesCS5B01G241900 chr5A 91.096 438 20 11 202 628 456058431 456058002 2.430000e-160 575.0
8 TraesCS5B01G241900 chr5A 91.732 254 19 2 257 510 458202122 458202373 4.460000e-93 351.0
9 TraesCS5B01G241900 chr5A 90.000 250 16 4 3 243 458201662 458201911 5.850000e-82 315.0
10 TraesCS5B01G241900 chr5A 88.462 234 19 6 710 942 456057969 456057743 2.760000e-70 276.0
11 TraesCS5B01G241900 chr5A 98.667 75 1 0 24 98 456058555 456058481 1.760000e-27 134.0
12 TraesCS5B01G241900 chr5A 86.719 128 5 4 2392 2519 456033080 456032965 6.320000e-27 132.0
13 TraesCS5B01G241900 chr5A 83.333 138 19 4 2570 2705 667129068 667128933 1.060000e-24 124.0
14 TraesCS5B01G241900 chr5A 100.000 49 0 0 123 171 456058482 456058434 1.070000e-14 91.6
15 TraesCS5B01G241900 chr5D 87.082 1525 101 50 523 2011 356846073 356847537 0.000000e+00 1637.0
16 TraesCS5B01G241900 chr5D 87.429 525 41 15 1 524 356845086 356845586 5.220000e-162 580.0
17 TraesCS5B01G241900 chr5D 95.000 60 1 2 2195 2253 494220409 494220351 2.980000e-15 93.5
18 TraesCS5B01G241900 chr5D 96.875 32 1 0 225 256 70639900 70639869 1.000000e-03 54.7
19 TraesCS5B01G241900 chr3B 86.034 179 22 3 2528 2705 709293172 709293348 3.700000e-44 189.0
20 TraesCS5B01G241900 chr1A 87.857 140 15 2 2570 2708 251399161 251399023 2.240000e-36 163.0
21 TraesCS5B01G241900 chr1A 87.591 137 14 3 2570 2705 535406035 535405901 3.750000e-34 156.0
22 TraesCS5B01G241900 chr1A 92.105 76 4 2 2263 2337 133417527 133417453 3.830000e-19 106.0
23 TraesCS5B01G241900 chr1B 85.106 141 17 4 2571 2708 189703069 189702930 1.050000e-29 141.0
24 TraesCS5B01G241900 chr1B 83.594 128 18 3 2578 2704 146790542 146790667 1.770000e-22 117.0
25 TraesCS5B01G241900 chrUn 85.714 133 16 3 2576 2705 40961765 40961897 1.360000e-28 137.0
26 TraesCS5B01G241900 chrUn 85.714 133 16 3 2576 2705 326500902 326501034 1.360000e-28 137.0
27 TraesCS5B01G241900 chrUn 93.590 78 4 1 2263 2339 22143179 22143256 6.370000e-22 115.0
28 TraesCS5B01G241900 chr6B 95.588 68 3 0 2263 2330 12465783 12465850 2.960000e-20 110.0
29 TraesCS5B01G241900 chr6B 90.667 75 4 3 2182 2253 543217524 543217450 2.310000e-16 97.1
30 TraesCS5B01G241900 chr6B 93.651 63 2 2 2188 2249 398012667 398012728 2.980000e-15 93.5
31 TraesCS5B01G241900 chr6B 93.651 63 2 2 2188 2249 398248248 398248309 2.980000e-15 93.5
32 TraesCS5B01G241900 chr6B 93.651 63 2 2 2188 2249 398248583 398248644 2.980000e-15 93.5
33 TraesCS5B01G241900 chr2A 90.476 84 6 2 2263 2345 79164416 79164498 2.960000e-20 110.0
34 TraesCS5B01G241900 chr2A 93.333 75 3 2 2263 2336 686840844 686840771 2.960000e-20 110.0
35 TraesCS5B01G241900 chr2A 94.286 70 4 0 2263 2332 78805741 78805672 1.070000e-19 108.0
36 TraesCS5B01G241900 chr4A 89.412 85 6 2 2263 2344 616405331 616405415 1.380000e-18 104.0
37 TraesCS5B01G241900 chr6A 89.157 83 7 2 2246 2327 323818690 323818771 4.960000e-18 102.0
38 TraesCS5B01G241900 chr4D 92.188 64 3 2 2187 2249 99160560 99160622 3.860000e-14 89.8
39 TraesCS5B01G241900 chr1D 94.828 58 2 1 2193 2249 462461619 462461562 3.860000e-14 89.8
40 TraesCS5B01G241900 chr1D 90.909 66 5 1 2184 2249 236500785 236500721 1.390000e-13 87.9
41 TraesCS5B01G241900 chr7A 81.197 117 14 5 2263 2372 20732992 20732877 1.390000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G241900 chr5B 421644483 421647294 2811 False 1784.666667 5193 94.252667 1 2812 3 chr5B.!!$F1 2811
1 TraesCS5B01G241900 chr5A 456032965 456034326 1361 True 914.000000 1696 89.888000 976 2519 2 chr5A.!!$R2 1543
2 TraesCS5B01G241900 chr5A 458201662 458203931 2269 False 788.666667 1700 89.866333 3 2168 3 chr5A.!!$F1 2165
3 TraesCS5B01G241900 chr5A 456057743 456058555 812 True 269.150000 575 94.556250 24 942 4 chr5A.!!$R3 918
4 TraesCS5B01G241900 chr5D 356845086 356847537 2451 False 1108.500000 1637 87.255500 1 2011 2 chr5D.!!$F1 2010

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
956 1705 0.264359 CCTCCTCTCCTCTCCACCAT 59.736 60.0 0.0 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2168 2967 0.108019 AAAAAGCGGACGGAGGAAGT 59.892 50.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
113 114 5.687730 GCTTAAGGTGAGCTTTCTTTCAAAC 59.312 40.000 0.90 0.00 37.18 2.93
198 208 6.998074 TCCATTTTCGCTCCTGTCAATATAAT 59.002 34.615 0.00 0.00 0.00 1.28
243 253 5.705441 TGCAAATTACTCCCTCTGTAAACTG 59.295 40.000 0.00 0.00 34.20 3.16
283 490 1.926511 GCCCTTGTCGCCATGTCTTG 61.927 60.000 0.00 0.00 0.00 3.02
326 533 5.263599 TCATTGCAGTTCCATAACCTTCAT 58.736 37.500 0.00 0.00 36.15 2.57
359 566 3.137360 ACAGTTGGAAGAGCTCCTTTCTT 59.863 43.478 10.93 0.00 45.64 2.52
469 679 5.299279 TGTTGGAACCTCATTCTTGAAGTTC 59.701 40.000 8.33 8.33 46.09 3.01
539 1239 2.708051 ACAGCACCTCAGATGACATTG 58.292 47.619 0.00 0.00 0.00 2.82
542 1242 3.945921 CAGCACCTCAGATGACATTGATT 59.054 43.478 0.00 0.00 0.00 2.57
543 1243 4.398358 CAGCACCTCAGATGACATTGATTT 59.602 41.667 0.00 0.00 0.00 2.17
545 1245 6.262496 CAGCACCTCAGATGACATTGATTTAT 59.738 38.462 0.00 0.00 0.00 1.40
546 1246 6.485984 AGCACCTCAGATGACATTGATTTATC 59.514 38.462 0.00 0.00 0.00 1.75
547 1247 6.565435 GCACCTCAGATGACATTGATTTATCG 60.565 42.308 0.00 0.00 0.00 2.92
548 1248 6.703165 CACCTCAGATGACATTGATTTATCGA 59.297 38.462 0.00 0.00 0.00 3.59
549 1249 6.927936 ACCTCAGATGACATTGATTTATCGAG 59.072 38.462 0.00 0.00 0.00 4.04
550 1250 7.150640 CCTCAGATGACATTGATTTATCGAGA 58.849 38.462 0.00 0.00 0.00 4.04
551 1251 7.654923 CCTCAGATGACATTGATTTATCGAGAA 59.345 37.037 0.00 0.00 0.00 2.87
561 1261 4.092821 TGATTTATCGAGAAAAGTGGCGTG 59.907 41.667 9.57 0.00 0.00 5.34
574 1282 1.877443 GTGGCGTGTTTTGGTGATACT 59.123 47.619 0.00 0.00 0.00 2.12
577 1285 3.749088 TGGCGTGTTTTGGTGATACTAAG 59.251 43.478 0.00 0.00 0.00 2.18
579 1287 3.723835 GCGTGTTTTGGTGATACTAAGCG 60.724 47.826 0.00 0.00 0.00 4.68
595 1303 1.226295 GCGTAGATTTTGCACGGCC 60.226 57.895 0.00 0.00 36.23 6.13
614 1331 1.291184 CCGTGTGATGCGTGACATGT 61.291 55.000 15.33 0.00 39.84 3.21
615 1332 0.512518 CGTGTGATGCGTGACATGTT 59.487 50.000 9.34 0.00 39.84 2.71
616 1333 1.069973 CGTGTGATGCGTGACATGTTT 60.070 47.619 9.34 0.00 39.84 2.83
628 1345 4.394729 GTGACATGTTTTAGTCCCTGGAA 58.605 43.478 0.00 0.00 33.89 3.53
655 1372 2.253452 CACAACGCCAGCAGAAGC 59.747 61.111 0.00 0.00 42.56 3.86
672 1412 1.123077 AGCTGCATCCTCCATCGTTA 58.877 50.000 1.02 0.00 0.00 3.18
674 1414 2.092968 AGCTGCATCCTCCATCGTTAAA 60.093 45.455 1.02 0.00 0.00 1.52
675 1415 2.289002 GCTGCATCCTCCATCGTTAAAG 59.711 50.000 0.00 0.00 0.00 1.85
676 1416 3.535561 CTGCATCCTCCATCGTTAAAGT 58.464 45.455 0.00 0.00 0.00 2.66
677 1417 4.693283 CTGCATCCTCCATCGTTAAAGTA 58.307 43.478 0.00 0.00 0.00 2.24
678 1418 5.290493 TGCATCCTCCATCGTTAAAGTAT 57.710 39.130 0.00 0.00 0.00 2.12
679 1419 6.413783 TGCATCCTCCATCGTTAAAGTATA 57.586 37.500 0.00 0.00 0.00 1.47
680 1420 7.004555 TGCATCCTCCATCGTTAAAGTATAT 57.995 36.000 0.00 0.00 0.00 0.86
681 1421 8.129496 TGCATCCTCCATCGTTAAAGTATATA 57.871 34.615 0.00 0.00 0.00 0.86
682 1422 8.033038 TGCATCCTCCATCGTTAAAGTATATAC 58.967 37.037 4.60 4.60 0.00 1.47
683 1423 8.251721 GCATCCTCCATCGTTAAAGTATATACT 58.748 37.037 9.71 9.71 38.39 2.12
684 1424 9.790389 CATCCTCCATCGTTAAAGTATATACTC 57.210 37.037 15.72 2.86 34.99 2.59
685 1425 8.345724 TCCTCCATCGTTAAAGTATATACTCC 57.654 38.462 15.72 4.26 34.99 3.85
686 1426 7.120285 TCCTCCATCGTTAAAGTATATACTCCG 59.880 40.741 15.72 14.43 34.99 4.63
687 1427 6.615088 TCCATCGTTAAAGTATATACTCCGC 58.385 40.000 15.72 6.31 34.99 5.54
688 1428 6.207221 TCCATCGTTAAAGTATATACTCCGCA 59.793 38.462 15.72 7.12 34.99 5.69
689 1429 7.033791 CCATCGTTAAAGTATATACTCCGCAT 58.966 38.462 15.72 0.00 34.99 4.73
690 1430 7.220300 CCATCGTTAAAGTATATACTCCGCATC 59.780 40.741 15.72 4.76 34.99 3.91
691 1431 7.205737 TCGTTAAAGTATATACTCCGCATCA 57.794 36.000 15.72 0.00 34.99 3.07
692 1432 7.650890 TCGTTAAAGTATATACTCCGCATCAA 58.349 34.615 15.72 1.01 34.99 2.57
693 1433 8.301720 TCGTTAAAGTATATACTCCGCATCAAT 58.698 33.333 15.72 0.00 34.99 2.57
694 1434 8.922676 CGTTAAAGTATATACTCCGCATCAATT 58.077 33.333 15.72 5.98 34.99 2.32
696 1436 7.672983 AAAGTATATACTCCGCATCAATTGG 57.327 36.000 15.72 0.00 34.99 3.16
697 1437 5.734720 AGTATATACTCCGCATCAATTGGG 58.265 41.667 9.71 0.00 37.99 4.12
698 1438 4.640771 ATATACTCCGCATCAATTGGGT 57.359 40.909 5.42 0.00 36.57 4.51
699 1439 5.755409 ATATACTCCGCATCAATTGGGTA 57.245 39.130 5.42 0.00 36.57 3.69
700 1440 4.640771 ATACTCCGCATCAATTGGGTAT 57.359 40.909 5.42 0.00 36.57 2.73
701 1441 2.575532 ACTCCGCATCAATTGGGTATG 58.424 47.619 5.42 3.47 36.57 2.39
702 1442 2.172505 ACTCCGCATCAATTGGGTATGA 59.827 45.455 5.42 0.00 36.57 2.15
703 1443 2.810274 CTCCGCATCAATTGGGTATGAG 59.190 50.000 5.42 4.16 36.57 2.90
704 1444 2.172505 TCCGCATCAATTGGGTATGAGT 59.827 45.455 5.42 0.00 36.57 3.41
705 1445 3.389656 TCCGCATCAATTGGGTATGAGTA 59.610 43.478 5.42 0.00 36.57 2.59
706 1446 3.498397 CCGCATCAATTGGGTATGAGTAC 59.502 47.826 5.42 0.00 36.57 2.73
732 1472 1.112916 TCTTGTCTCACCGCTCCACA 61.113 55.000 0.00 0.00 0.00 4.17
739 1479 2.048023 CACCGCTCCACATGCCATT 61.048 57.895 0.00 0.00 0.00 3.16
888 1629 2.490509 CACCTCCAGTATCACACGTGTA 59.509 50.000 22.90 10.48 0.00 2.90
915 1660 1.283905 AGCCTACCCACGCCTTAAAAT 59.716 47.619 0.00 0.00 0.00 1.82
916 1661 2.097036 GCCTACCCACGCCTTAAAATT 58.903 47.619 0.00 0.00 0.00 1.82
929 1678 0.648441 TAAAATTAGCTGACGCCGCG 59.352 50.000 12.14 12.14 36.60 6.46
930 1679 1.296056 AAAATTAGCTGACGCCGCGT 61.296 50.000 20.31 20.31 45.10 6.01
952 1701 1.230650 TCCCCTCCTCTCCTCTCCA 60.231 63.158 0.00 0.00 0.00 3.86
953 1702 1.075600 CCCCTCCTCTCCTCTCCAC 60.076 68.421 0.00 0.00 0.00 4.02
955 1704 1.700368 CCTCCTCTCCTCTCCACCA 59.300 63.158 0.00 0.00 0.00 4.17
956 1705 0.264359 CCTCCTCTCCTCTCCACCAT 59.736 60.000 0.00 0.00 0.00 3.55
957 1706 1.501170 CCTCCTCTCCTCTCCACCATA 59.499 57.143 0.00 0.00 0.00 2.74
958 1707 2.593026 CTCCTCTCCTCTCCACCATAC 58.407 57.143 0.00 0.00 0.00 2.39
959 1708 2.176798 CTCCTCTCCTCTCCACCATACT 59.823 54.545 0.00 0.00 0.00 2.12
961 1710 2.176798 CCTCTCCTCTCCACCATACTCT 59.823 54.545 0.00 0.00 0.00 3.24
962 1711 3.396276 CCTCTCCTCTCCACCATACTCTA 59.604 52.174 0.00 0.00 0.00 2.43
963 1712 4.506625 CCTCTCCTCTCCACCATACTCTAG 60.507 54.167 0.00 0.00 0.00 2.43
965 1714 1.883275 CCTCTCCACCATACTCTAGCG 59.117 57.143 0.00 0.00 0.00 4.26
967 1716 1.133761 TCTCCACCATACTCTAGCGCT 60.134 52.381 17.26 17.26 0.00 5.92
969 1718 2.101582 CTCCACCATACTCTAGCGCTTT 59.898 50.000 18.68 0.00 0.00 3.51
970 1719 2.100916 TCCACCATACTCTAGCGCTTTC 59.899 50.000 18.68 0.00 0.00 2.62
971 1720 2.474816 CACCATACTCTAGCGCTTTCC 58.525 52.381 18.68 0.00 0.00 3.13
973 1722 1.603172 CCATACTCTAGCGCTTTCCCG 60.603 57.143 18.68 2.51 0.00 5.14
1277 2051 4.684265 CGAGTACATCGTCACCGG 57.316 61.111 0.00 0.00 46.62 5.28
1371 2145 3.197790 CTCTTCATGCCCGGCGTG 61.198 66.667 23.69 23.69 45.79 5.34
1568 2343 1.076332 CCGAGTTCACCGTGATTTCC 58.924 55.000 1.09 0.00 0.00 3.13
1572 2347 3.250040 CGAGTTCACCGTGATTTCCTTTT 59.750 43.478 1.09 0.00 0.00 2.27
1573 2348 4.261031 CGAGTTCACCGTGATTTCCTTTTT 60.261 41.667 1.09 0.00 0.00 1.94
1589 2364 3.862845 CCTTTTTGGTTTCTTGGTTCGTG 59.137 43.478 0.00 0.00 0.00 4.35
1605 2385 2.027024 TGCACCGAGTGTCGTGTC 59.973 61.111 6.02 0.00 38.40 3.67
1617 2397 1.269166 GTCGTGTCGGCTTACTGATG 58.731 55.000 0.00 0.00 32.57 3.07
1619 2399 1.749063 TCGTGTCGGCTTACTGATGAT 59.251 47.619 0.00 0.00 32.57 2.45
1621 2401 2.282555 CGTGTCGGCTTACTGATGATTG 59.717 50.000 0.00 0.00 32.57 2.67
1623 2403 4.430007 GTGTCGGCTTACTGATGATTGTA 58.570 43.478 0.00 0.00 32.57 2.41
1625 2405 4.868171 TGTCGGCTTACTGATGATTGTAAC 59.132 41.667 0.00 0.00 32.57 2.50
1667 2447 0.874607 AGTTCAGCGTGTCGTTCCAC 60.875 55.000 0.00 0.00 0.00 4.02
1683 2463 1.132849 TCCACAAGGAGAGGGAGAACA 60.133 52.381 0.00 0.00 39.61 3.18
1754 2534 0.401738 CTGGGAAGGGCTTGAAGACA 59.598 55.000 0.00 0.00 0.00 3.41
1864 2650 1.133294 TGGGTGTATGATAGCCGGAGA 60.133 52.381 5.05 0.00 38.52 3.71
1865 2651 2.180276 GGGTGTATGATAGCCGGAGAT 58.820 52.381 5.05 0.00 0.00 2.75
1866 2652 3.245479 TGGGTGTATGATAGCCGGAGATA 60.245 47.826 5.05 0.00 38.52 1.98
1867 2653 3.961408 GGGTGTATGATAGCCGGAGATAT 59.039 47.826 5.05 0.00 0.00 1.63
1945 2735 4.212214 GTGAGTGCTCGAAGAATTGACTTT 59.788 41.667 0.00 0.00 34.09 2.66
2018 2811 9.912634 TTAGAAGGAATCAAATGAATCAACAAC 57.087 29.630 1.29 0.00 0.00 3.32
2116 2915 0.317160 TCGGCGAGAACAACATCTGT 59.683 50.000 4.99 0.00 41.27 3.41
2157 2956 4.844884 AGCTGAAACTAATACAGAACCCC 58.155 43.478 0.00 0.00 34.07 4.95
2158 2957 3.621715 GCTGAAACTAATACAGAACCCCG 59.378 47.826 0.00 0.00 34.07 5.73
2159 2958 3.602483 TGAAACTAATACAGAACCCCGC 58.398 45.455 0.00 0.00 0.00 6.13
2161 2960 3.706600 AACTAATACAGAACCCCGCAA 57.293 42.857 0.00 0.00 0.00 4.85
2163 2962 3.340928 ACTAATACAGAACCCCGCAAAC 58.659 45.455 0.00 0.00 0.00 2.93
2165 2964 2.279935 ATACAGAACCCCGCAAACAA 57.720 45.000 0.00 0.00 0.00 2.83
2166 2965 2.054232 TACAGAACCCCGCAAACAAA 57.946 45.000 0.00 0.00 0.00 2.83
2167 2966 1.408969 ACAGAACCCCGCAAACAAAT 58.591 45.000 0.00 0.00 0.00 2.32
2168 2967 2.588620 ACAGAACCCCGCAAACAAATA 58.411 42.857 0.00 0.00 0.00 1.40
2171 2970 3.005367 CAGAACCCCGCAAACAAATACTT 59.995 43.478 0.00 0.00 0.00 2.24
2172 2971 3.254903 AGAACCCCGCAAACAAATACTTC 59.745 43.478 0.00 0.00 0.00 3.01
2173 2972 1.890489 ACCCCGCAAACAAATACTTCC 59.110 47.619 0.00 0.00 0.00 3.46
2175 2974 2.163613 CCCCGCAAACAAATACTTCCTC 59.836 50.000 0.00 0.00 0.00 3.71
2176 2975 2.163613 CCCGCAAACAAATACTTCCTCC 59.836 50.000 0.00 0.00 0.00 4.30
2179 2978 3.424433 CGCAAACAAATACTTCCTCCGTC 60.424 47.826 0.00 0.00 0.00 4.79
2181 2980 2.667473 ACAAATACTTCCTCCGTCCG 57.333 50.000 0.00 0.00 0.00 4.79
2182 2981 1.287425 CAAATACTTCCTCCGTCCGC 58.713 55.000 0.00 0.00 0.00 5.54
2183 2982 1.134788 CAAATACTTCCTCCGTCCGCT 60.135 52.381 0.00 0.00 0.00 5.52
2184 2983 1.192428 AATACTTCCTCCGTCCGCTT 58.808 50.000 0.00 0.00 0.00 4.68
2188 2987 0.517316 CTTCCTCCGTCCGCTTTTTG 59.483 55.000 0.00 0.00 0.00 2.44
2189 2988 0.107081 TTCCTCCGTCCGCTTTTTGA 59.893 50.000 0.00 0.00 0.00 2.69
2190 2989 0.601841 TCCTCCGTCCGCTTTTTGAC 60.602 55.000 0.00 0.00 0.00 3.18
2192 2991 1.156736 CTCCGTCCGCTTTTTGACAT 58.843 50.000 0.00 0.00 0.00 3.06
2194 2993 1.265635 TCCGTCCGCTTTTTGACATTG 59.734 47.619 0.00 0.00 0.00 2.82
2195 2994 1.001815 CCGTCCGCTTTTTGACATTGT 60.002 47.619 0.00 0.00 0.00 2.71
2197 2996 3.223157 CGTCCGCTTTTTGACATTGTAC 58.777 45.455 0.00 0.00 0.00 2.90
2198 2997 3.059188 CGTCCGCTTTTTGACATTGTACT 60.059 43.478 0.00 0.00 0.00 2.73
2199 2998 4.464112 GTCCGCTTTTTGACATTGTACTC 58.536 43.478 0.00 0.00 0.00 2.59
2200 2999 3.500680 TCCGCTTTTTGACATTGTACTCC 59.499 43.478 0.00 0.00 0.00 3.85
2202 3001 4.023193 CCGCTTTTTGACATTGTACTCCTT 60.023 41.667 0.00 0.00 0.00 3.36
2203 3002 5.147162 CGCTTTTTGACATTGTACTCCTTC 58.853 41.667 0.00 0.00 0.00 3.46
2204 3003 5.049405 CGCTTTTTGACATTGTACTCCTTCT 60.049 40.000 0.00 0.00 0.00 2.85
2205 3004 6.147164 CGCTTTTTGACATTGTACTCCTTCTA 59.853 38.462 0.00 0.00 0.00 2.10
2207 3006 9.162764 GCTTTTTGACATTGTACTCCTTCTATA 57.837 33.333 0.00 0.00 0.00 1.31
2281 3080 9.924650 AGTTTACATAAGAACGTTTAGATCACT 57.075 29.630 0.46 0.00 0.00 3.41
2286 3085 9.924650 ACATAAGAACGTTTAGATCACTAAAGT 57.075 29.630 0.46 0.00 45.42 2.66
2293 3092 9.631452 AACGTTTAGATCACTAAAGTAGTAACC 57.369 33.333 0.00 0.00 45.42 2.85
2294 3093 8.246871 ACGTTTAGATCACTAAAGTAGTAACCC 58.753 37.037 0.00 0.00 45.42 4.11
2295 3094 8.246180 CGTTTAGATCACTAAAGTAGTAACCCA 58.754 37.037 0.00 0.00 45.42 4.51
2296 3095 9.933723 GTTTAGATCACTAAAGTAGTAACCCAA 57.066 33.333 0.00 0.00 45.42 4.12
2298 3097 9.933723 TTAGATCACTAAAGTAGTAACCCAAAC 57.066 33.333 0.00 0.00 37.23 2.93
2299 3098 7.095270 AGATCACTAAAGTAGTAACCCAAACG 58.905 38.462 0.00 0.00 37.23 3.60
2300 3099 4.990426 TCACTAAAGTAGTAACCCAAACGC 59.010 41.667 0.00 0.00 37.23 4.84
2301 3100 4.992951 CACTAAAGTAGTAACCCAAACGCT 59.007 41.667 0.00 0.00 37.23 5.07
2302 3101 5.119743 CACTAAAGTAGTAACCCAAACGCTC 59.880 44.000 0.00 0.00 37.23 5.03
2303 3102 4.347360 AAAGTAGTAACCCAAACGCTCT 57.653 40.909 0.00 0.00 0.00 4.09
2304 3103 4.347360 AAGTAGTAACCCAAACGCTCTT 57.653 40.909 0.00 0.00 0.00 2.85
2305 3104 5.473066 AAGTAGTAACCCAAACGCTCTTA 57.527 39.130 0.00 0.00 0.00 2.10
2306 3105 5.672421 AGTAGTAACCCAAACGCTCTTAT 57.328 39.130 0.00 0.00 0.00 1.73
2307 3106 6.780457 AGTAGTAACCCAAACGCTCTTATA 57.220 37.500 0.00 0.00 0.00 0.98
2308 3107 7.357429 AGTAGTAACCCAAACGCTCTTATAT 57.643 36.000 0.00 0.00 0.00 0.86
2309 3108 7.789026 AGTAGTAACCCAAACGCTCTTATATT 58.211 34.615 0.00 0.00 0.00 1.28
2310 3109 8.917088 AGTAGTAACCCAAACGCTCTTATATTA 58.083 33.333 0.00 0.00 0.00 0.98
2311 3110 9.189723 GTAGTAACCCAAACGCTCTTATATTAG 57.810 37.037 0.00 0.00 0.00 1.73
2312 3111 7.789026 AGTAACCCAAACGCTCTTATATTAGT 58.211 34.615 0.00 0.00 0.00 2.24
2313 3112 8.262933 AGTAACCCAAACGCTCTTATATTAGTT 58.737 33.333 0.00 0.00 0.00 2.24
2314 3113 7.933215 AACCCAAACGCTCTTATATTAGTTT 57.067 32.000 0.00 0.00 32.82 2.66
2316 3115 8.429493 ACCCAAACGCTCTTATATTAGTTTAC 57.571 34.615 0.00 0.00 31.63 2.01
2317 3116 7.223387 ACCCAAACGCTCTTATATTAGTTTACG 59.777 37.037 0.00 0.00 31.63 3.18
2318 3117 7.306983 CCCAAACGCTCTTATATTAGTTTACGG 60.307 40.741 0.00 0.00 31.63 4.02
2319 3118 7.436080 CCAAACGCTCTTATATTAGTTTACGGA 59.564 37.037 0.00 0.00 31.63 4.69
2320 3119 8.477709 CAAACGCTCTTATATTAGTTTACGGAG 58.522 37.037 0.00 0.00 31.63 4.63
2321 3120 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
2322 3121 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
2330 3129 6.951062 ATTAGTTTACGGAGGGAGTACTAC 57.049 41.667 0.00 0.00 0.00 2.73
2333 3132 4.018960 AGTTTACGGAGGGAGTACTACTGA 60.019 45.833 4.77 0.00 0.00 3.41
2360 3159 9.915629 AAACAACAAATACTACTGAAAACAACA 57.084 25.926 0.00 0.00 0.00 3.33
2361 3160 9.915629 AACAACAAATACTACTGAAAACAACAA 57.084 25.926 0.00 0.00 0.00 2.83
2362 3161 9.915629 ACAACAAATACTACTGAAAACAACAAA 57.084 25.926 0.00 0.00 0.00 2.83
2371 3170 9.915629 ACTACTGAAAACAACAAATACAACAAA 57.084 25.926 0.00 0.00 0.00 2.83
2446 3245 8.439993 TGCACAACAATACTAGTGAAAACTAA 57.560 30.769 5.39 0.00 33.99 2.24
2457 3256 8.203681 ACTAGTGAAAACTAATACAGAACCCT 57.796 34.615 0.00 0.00 0.00 4.34
2469 3268 4.184649 ACAGAACCCTGGAAACAAATCT 57.815 40.909 0.00 0.00 44.60 2.40
2470 3269 4.546674 ACAGAACCCTGGAAACAAATCTT 58.453 39.130 0.00 0.00 44.60 2.40
2471 3270 4.584743 ACAGAACCCTGGAAACAAATCTTC 59.415 41.667 0.00 0.00 44.60 2.87
2488 3287 8.842280 ACAAATCTTCCGAAAACATGTACTTAA 58.158 29.630 0.00 0.00 0.00 1.85
2513 3312 7.151976 AGGAAACAACAAATAACCTTATGCAC 58.848 34.615 0.00 0.00 0.00 4.57
2514 3313 6.926272 GGAAACAACAAATAACCTTATGCACA 59.074 34.615 0.00 0.00 0.00 4.57
2519 3318 7.437862 ACAACAAATAACCTTATGCACAACAAG 59.562 33.333 0.00 0.00 0.00 3.16
2520 3319 6.454795 ACAAATAACCTTATGCACAACAAGG 58.545 36.000 13.80 13.80 43.73 3.61
2521 3320 6.266558 ACAAATAACCTTATGCACAACAAGGA 59.733 34.615 19.60 4.43 41.18 3.36
2522 3321 7.039082 ACAAATAACCTTATGCACAACAAGGAT 60.039 33.333 19.60 12.96 41.18 3.24
2523 3322 6.699575 ATAACCTTATGCACAACAAGGATC 57.300 37.500 19.60 0.00 41.18 3.36
2524 3323 3.356290 ACCTTATGCACAACAAGGATCC 58.644 45.455 19.60 2.48 41.18 3.36
2525 3324 2.355756 CCTTATGCACAACAAGGATCCG 59.644 50.000 5.98 0.00 41.18 4.18
2526 3325 2.036958 TATGCACAACAAGGATCCGG 57.963 50.000 5.98 5.45 0.00 5.14
2527 3326 1.315257 ATGCACAACAAGGATCCGGC 61.315 55.000 5.98 3.70 0.00 6.13
2528 3327 1.675641 GCACAACAAGGATCCGGCT 60.676 57.895 5.98 0.00 0.00 5.52
2529 3328 1.244019 GCACAACAAGGATCCGGCTT 61.244 55.000 5.98 0.00 0.00 4.35
2530 3329 0.523072 CACAACAAGGATCCGGCTTG 59.477 55.000 16.10 16.10 0.00 4.01
2531 3330 1.244019 ACAACAAGGATCCGGCTTGC 61.244 55.000 17.23 4.18 0.00 4.01
2532 3331 1.678970 AACAAGGATCCGGCTTGCC 60.679 57.895 17.23 0.75 0.00 4.52
2533 3332 2.142292 AACAAGGATCCGGCTTGCCT 62.142 55.000 17.23 8.86 0.00 4.75
2534 3333 2.117156 CAAGGATCCGGCTTGCCTG 61.117 63.158 5.98 3.29 0.00 4.85
2535 3334 4.496336 AGGATCCGGCTTGCCTGC 62.496 66.667 5.98 0.00 0.00 4.85
2536 3335 4.496336 GGATCCGGCTTGCCTGCT 62.496 66.667 10.12 0.00 0.00 4.24
2537 3336 2.439156 GATCCGGCTTGCCTGCTT 60.439 61.111 10.12 0.00 0.00 3.91
2538 3337 2.036256 ATCCGGCTTGCCTGCTTT 59.964 55.556 10.12 0.00 0.00 3.51
2539 3338 1.997928 GATCCGGCTTGCCTGCTTTC 61.998 60.000 10.12 0.00 0.00 2.62
2540 3339 2.769652 ATCCGGCTTGCCTGCTTTCA 62.770 55.000 10.12 0.00 0.00 2.69
2541 3340 2.345760 CCGGCTTGCCTGCTTTCAT 61.346 57.895 10.12 0.00 0.00 2.57
2542 3341 1.588082 CGGCTTGCCTGCTTTCATT 59.412 52.632 10.12 0.00 0.00 2.57
2543 3342 0.457337 CGGCTTGCCTGCTTTCATTC 60.457 55.000 10.12 0.00 0.00 2.67
2544 3343 0.457337 GGCTTGCCTGCTTTCATTCG 60.457 55.000 4.11 0.00 0.00 3.34
2545 3344 0.242017 GCTTGCCTGCTTTCATTCGT 59.758 50.000 0.00 0.00 0.00 3.85
2546 3345 1.468520 GCTTGCCTGCTTTCATTCGTA 59.531 47.619 0.00 0.00 0.00 3.43
2547 3346 2.098117 GCTTGCCTGCTTTCATTCGTAT 59.902 45.455 0.00 0.00 0.00 3.06
2548 3347 3.428045 GCTTGCCTGCTTTCATTCGTATT 60.428 43.478 0.00 0.00 0.00 1.89
2549 3348 4.346129 CTTGCCTGCTTTCATTCGTATTC 58.654 43.478 0.00 0.00 0.00 1.75
2550 3349 2.682856 TGCCTGCTTTCATTCGTATTCC 59.317 45.455 0.00 0.00 0.00 3.01
2551 3350 2.945668 GCCTGCTTTCATTCGTATTCCT 59.054 45.455 0.00 0.00 0.00 3.36
2552 3351 4.127171 GCCTGCTTTCATTCGTATTCCTA 58.873 43.478 0.00 0.00 0.00 2.94
2553 3352 4.024809 GCCTGCTTTCATTCGTATTCCTAC 60.025 45.833 0.00 0.00 0.00 3.18
2554 3353 5.360591 CCTGCTTTCATTCGTATTCCTACT 58.639 41.667 0.00 0.00 0.00 2.57
2555 3354 5.817816 CCTGCTTTCATTCGTATTCCTACTT 59.182 40.000 0.00 0.00 0.00 2.24
2556 3355 6.018669 CCTGCTTTCATTCGTATTCCTACTTC 60.019 42.308 0.00 0.00 0.00 3.01
2557 3356 6.403049 TGCTTTCATTCGTATTCCTACTTCA 58.597 36.000 0.00 0.00 0.00 3.02
2558 3357 7.047891 TGCTTTCATTCGTATTCCTACTTCAT 58.952 34.615 0.00 0.00 0.00 2.57
2559 3358 7.224753 TGCTTTCATTCGTATTCCTACTTCATC 59.775 37.037 0.00 0.00 0.00 2.92
2560 3359 7.307455 GCTTTCATTCGTATTCCTACTTCATCC 60.307 40.741 0.00 0.00 0.00 3.51
2561 3360 6.978674 TCATTCGTATTCCTACTTCATCCT 57.021 37.500 0.00 0.00 0.00 3.24
2562 3361 6.749139 TCATTCGTATTCCTACTTCATCCTG 58.251 40.000 0.00 0.00 0.00 3.86
2563 3362 6.323996 TCATTCGTATTCCTACTTCATCCTGT 59.676 38.462 0.00 0.00 0.00 4.00
2564 3363 5.515797 TCGTATTCCTACTTCATCCTGTG 57.484 43.478 0.00 0.00 0.00 3.66
2565 3364 5.198207 TCGTATTCCTACTTCATCCTGTGA 58.802 41.667 0.00 0.00 34.25 3.58
2566 3365 5.067413 TCGTATTCCTACTTCATCCTGTGAC 59.933 44.000 0.00 0.00 36.32 3.67
2567 3366 5.067936 CGTATTCCTACTTCATCCTGTGACT 59.932 44.000 0.00 0.00 36.32 3.41
2568 3367 4.808414 TTCCTACTTCATCCTGTGACTG 57.192 45.455 0.00 0.00 36.32 3.51
2569 3368 3.779444 TCCTACTTCATCCTGTGACTGT 58.221 45.455 0.00 0.00 36.32 3.55
2570 3369 3.764434 TCCTACTTCATCCTGTGACTGTC 59.236 47.826 0.00 0.00 36.32 3.51
2571 3370 3.766591 CCTACTTCATCCTGTGACTGTCT 59.233 47.826 9.51 0.00 36.32 3.41
2572 3371 4.221703 CCTACTTCATCCTGTGACTGTCTT 59.778 45.833 9.51 0.00 36.32 3.01
2573 3372 4.696479 ACTTCATCCTGTGACTGTCTTT 57.304 40.909 9.51 0.00 36.32 2.52
2574 3373 5.041191 ACTTCATCCTGTGACTGTCTTTT 57.959 39.130 9.51 0.00 36.32 2.27
2575 3374 5.440610 ACTTCATCCTGTGACTGTCTTTTT 58.559 37.500 9.51 0.00 36.32 1.94
2613 3412 7.944729 TCATCTTTCCTCTGATTTTAAAGGG 57.055 36.000 0.00 0.00 0.00 3.95
2614 3413 7.698912 TCATCTTTCCTCTGATTTTAAAGGGA 58.301 34.615 0.00 0.00 0.00 4.20
2615 3414 8.339247 TCATCTTTCCTCTGATTTTAAAGGGAT 58.661 33.333 0.00 0.00 0.00 3.85
2616 3415 7.944729 TCTTTCCTCTGATTTTAAAGGGATG 57.055 36.000 0.00 0.00 0.00 3.51
2617 3416 6.891908 TCTTTCCTCTGATTTTAAAGGGATGG 59.108 38.462 0.00 0.00 0.00 3.51
2618 3417 5.129368 TCCTCTGATTTTAAAGGGATGGG 57.871 43.478 0.00 0.00 0.00 4.00
2619 3418 4.079212 TCCTCTGATTTTAAAGGGATGGGG 60.079 45.833 0.00 0.00 0.00 4.96
2620 3419 4.326132 CCTCTGATTTTAAAGGGATGGGGT 60.326 45.833 0.00 0.00 0.00 4.95
2621 3420 4.867086 TCTGATTTTAAAGGGATGGGGTC 58.133 43.478 0.00 0.00 0.00 4.46
2622 3421 3.626930 TGATTTTAAAGGGATGGGGTCG 58.373 45.455 0.00 0.00 0.00 4.79
2623 3422 2.517998 TTTTAAAGGGATGGGGTCGG 57.482 50.000 0.00 0.00 0.00 4.79
2624 3423 1.671293 TTTAAAGGGATGGGGTCGGA 58.329 50.000 0.00 0.00 0.00 4.55
2625 3424 0.913924 TTAAAGGGATGGGGTCGGAC 59.086 55.000 0.00 0.00 0.00 4.79
2626 3425 0.984432 TAAAGGGATGGGGTCGGACC 60.984 60.000 19.06 19.06 37.60 4.46
2627 3426 2.782997 AAAGGGATGGGGTCGGACCT 62.783 60.000 25.39 7.14 38.64 3.85
2628 3427 2.691252 GGGATGGGGTCGGACCTT 60.691 66.667 25.39 11.68 38.64 3.50
2629 3428 1.383525 GGGATGGGGTCGGACCTTA 60.384 63.158 25.39 15.34 38.64 2.69
2630 3429 0.767060 GGGATGGGGTCGGACCTTAT 60.767 60.000 25.39 18.98 38.64 1.73
2631 3430 1.137697 GGATGGGGTCGGACCTTATT 58.862 55.000 25.39 9.28 38.64 1.40
2632 3431 1.493446 GGATGGGGTCGGACCTTATTT 59.507 52.381 25.39 7.60 38.64 1.40
2633 3432 2.092049 GGATGGGGTCGGACCTTATTTT 60.092 50.000 25.39 6.27 38.64 1.82
2634 3433 2.500392 TGGGGTCGGACCTTATTTTG 57.500 50.000 25.39 0.00 38.64 2.44
2635 3434 1.706305 TGGGGTCGGACCTTATTTTGT 59.294 47.619 25.39 0.00 38.64 2.83
2636 3435 2.108601 TGGGGTCGGACCTTATTTTGTT 59.891 45.455 25.39 0.00 38.64 2.83
2637 3436 3.159472 GGGGTCGGACCTTATTTTGTTT 58.841 45.455 25.39 0.00 38.64 2.83
2638 3437 3.192001 GGGGTCGGACCTTATTTTGTTTC 59.808 47.826 25.39 5.24 38.64 2.78
2639 3438 3.822167 GGGTCGGACCTTATTTTGTTTCA 59.178 43.478 25.39 0.00 38.64 2.69
2640 3439 4.278919 GGGTCGGACCTTATTTTGTTTCAA 59.721 41.667 25.39 0.00 38.64 2.69
2641 3440 5.047590 GGGTCGGACCTTATTTTGTTTCAAT 60.048 40.000 25.39 0.00 38.64 2.57
2642 3441 6.090783 GGTCGGACCTTATTTTGTTTCAATC 58.909 40.000 19.92 0.00 34.73 2.67
2643 3442 6.294286 GGTCGGACCTTATTTTGTTTCAATCA 60.294 38.462 19.92 0.00 34.73 2.57
2644 3443 7.142680 GTCGGACCTTATTTTGTTTCAATCAA 58.857 34.615 0.00 0.00 0.00 2.57
2645 3444 7.650104 GTCGGACCTTATTTTGTTTCAATCAAA 59.350 33.333 0.00 0.00 33.76 2.69
2646 3445 8.198109 TCGGACCTTATTTTGTTTCAATCAAAA 58.802 29.630 8.47 8.47 44.83 2.44
2647 3446 8.272866 CGGACCTTATTTTGTTTCAATCAAAAC 58.727 33.333 8.26 0.00 44.00 2.43
2648 3447 9.103861 GGACCTTATTTTGTTTCAATCAAAACA 57.896 29.630 8.26 0.00 44.98 2.83
2658 3457 8.755696 TGTTTCAATCAAAACAAGCCATATAC 57.244 30.769 0.01 0.00 44.02 1.47
2659 3458 7.540400 TGTTTCAATCAAAACAAGCCATATACG 59.460 33.333 0.01 0.00 44.02 3.06
2660 3459 5.577835 TCAATCAAAACAAGCCATATACGC 58.422 37.500 0.00 0.00 0.00 4.42
2661 3460 3.666883 TCAAAACAAGCCATATACGCG 57.333 42.857 3.53 3.53 0.00 6.01
2662 3461 2.353269 TCAAAACAAGCCATATACGCGG 59.647 45.455 12.47 0.00 0.00 6.46
2663 3462 2.319136 AAACAAGCCATATACGCGGA 57.681 45.000 12.47 0.00 0.00 5.54
2664 3463 2.319136 AACAAGCCATATACGCGGAA 57.681 45.000 12.47 0.00 0.00 4.30
2665 3464 1.865865 ACAAGCCATATACGCGGAAG 58.134 50.000 12.47 0.00 0.00 3.46
2666 3465 1.138266 ACAAGCCATATACGCGGAAGT 59.862 47.619 12.47 0.00 0.00 3.01
2667 3466 2.363038 ACAAGCCATATACGCGGAAGTA 59.637 45.455 12.47 0.00 0.00 2.24
2668 3467 2.719426 AGCCATATACGCGGAAGTAC 57.281 50.000 12.47 0.00 0.00 2.73
2669 3468 1.958579 AGCCATATACGCGGAAGTACA 59.041 47.619 12.47 0.00 0.00 2.90
2670 3469 2.030185 AGCCATATACGCGGAAGTACAG 60.030 50.000 12.47 0.00 0.00 2.74
2671 3470 2.030540 GCCATATACGCGGAAGTACAGA 60.031 50.000 12.47 0.00 0.00 3.41
2672 3471 3.367087 GCCATATACGCGGAAGTACAGAT 60.367 47.826 12.47 0.00 0.00 2.90
2673 3472 4.166523 CCATATACGCGGAAGTACAGATG 58.833 47.826 12.47 0.00 0.00 2.90
2674 3473 2.795175 ATACGCGGAAGTACAGATGG 57.205 50.000 12.47 0.00 0.00 3.51
2675 3474 0.742505 TACGCGGAAGTACAGATGGG 59.257 55.000 12.47 0.00 0.00 4.00
2676 3475 1.883084 CGCGGAAGTACAGATGGGC 60.883 63.158 0.00 0.00 0.00 5.36
2677 3476 1.220749 GCGGAAGTACAGATGGGCA 59.779 57.895 0.00 0.00 0.00 5.36
2678 3477 1.090052 GCGGAAGTACAGATGGGCAC 61.090 60.000 0.00 0.00 0.00 5.01
2679 3478 0.249120 CGGAAGTACAGATGGGCACA 59.751 55.000 0.00 0.00 0.00 4.57
2680 3479 1.739067 GGAAGTACAGATGGGCACAC 58.261 55.000 0.00 0.00 0.00 3.82
2681 3480 1.359848 GAAGTACAGATGGGCACACG 58.640 55.000 0.00 0.00 0.00 4.49
2682 3481 0.673644 AAGTACAGATGGGCACACGC 60.674 55.000 0.00 0.00 37.44 5.34
2683 3482 1.375396 GTACAGATGGGCACACGCA 60.375 57.895 0.00 0.00 43.66 5.24
2684 3483 0.953471 GTACAGATGGGCACACGCAA 60.953 55.000 0.00 0.00 42.66 4.85
2685 3484 0.673333 TACAGATGGGCACACGCAAG 60.673 55.000 0.00 0.00 42.66 4.01
2686 3485 2.360350 AGATGGGCACACGCAAGG 60.360 61.111 0.00 0.00 42.66 3.61
2698 3497 3.066814 GCAAGGGGAGCAGGCAAG 61.067 66.667 0.00 0.00 0.00 4.01
2699 3498 2.437897 CAAGGGGAGCAGGCAAGT 59.562 61.111 0.00 0.00 0.00 3.16
2700 3499 1.676967 CAAGGGGAGCAGGCAAGTC 60.677 63.158 0.00 0.00 0.00 3.01
2701 3500 1.849823 AAGGGGAGCAGGCAAGTCT 60.850 57.895 0.00 0.00 0.00 3.24
2702 3501 1.846712 AAGGGGAGCAGGCAAGTCTC 61.847 60.000 0.00 0.00 0.00 3.36
2703 3502 2.125350 GGGAGCAGGCAAGTCTCG 60.125 66.667 0.00 0.00 0.00 4.04
2704 3503 2.659610 GGAGCAGGCAAGTCTCGT 59.340 61.111 0.00 0.00 0.00 4.18
2705 3504 1.004440 GGAGCAGGCAAGTCTCGTT 60.004 57.895 0.00 0.00 0.00 3.85
2706 3505 1.016653 GGAGCAGGCAAGTCTCGTTC 61.017 60.000 0.00 0.00 0.00 3.95
2707 3506 0.319900 GAGCAGGCAAGTCTCGTTCA 60.320 55.000 0.00 0.00 0.00 3.18
2708 3507 0.601311 AGCAGGCAAGTCTCGTTCAC 60.601 55.000 0.00 0.00 0.00 3.18
2709 3508 0.880278 GCAGGCAAGTCTCGTTCACA 60.880 55.000 0.00 0.00 0.00 3.58
2710 3509 0.861837 CAGGCAAGTCTCGTTCACAC 59.138 55.000 0.00 0.00 0.00 3.82
2711 3510 0.464036 AGGCAAGTCTCGTTCACACA 59.536 50.000 0.00 0.00 0.00 3.72
2712 3511 1.134521 AGGCAAGTCTCGTTCACACAA 60.135 47.619 0.00 0.00 0.00 3.33
2713 3512 1.003866 GGCAAGTCTCGTTCACACAAC 60.004 52.381 0.00 0.00 0.00 3.32
2714 3513 1.663643 GCAAGTCTCGTTCACACAACA 59.336 47.619 0.00 0.00 0.00 3.33
2715 3514 2.095213 GCAAGTCTCGTTCACACAACAA 59.905 45.455 0.00 0.00 0.00 2.83
2716 3515 3.242739 GCAAGTCTCGTTCACACAACAAT 60.243 43.478 0.00 0.00 0.00 2.71
2717 3516 4.025229 GCAAGTCTCGTTCACACAACAATA 60.025 41.667 0.00 0.00 0.00 1.90
2718 3517 5.432157 CAAGTCTCGTTCACACAACAATAC 58.568 41.667 0.00 0.00 0.00 1.89
2719 3518 4.945246 AGTCTCGTTCACACAACAATACT 58.055 39.130 0.00 0.00 0.00 2.12
2720 3519 6.080648 AGTCTCGTTCACACAACAATACTA 57.919 37.500 0.00 0.00 0.00 1.82
2721 3520 5.919141 AGTCTCGTTCACACAACAATACTAC 59.081 40.000 0.00 0.00 0.00 2.73
2722 3521 5.919141 GTCTCGTTCACACAACAATACTACT 59.081 40.000 0.00 0.00 0.00 2.57
2723 3522 5.918576 TCTCGTTCACACAACAATACTACTG 59.081 40.000 0.00 0.00 0.00 2.74
2724 3523 5.834169 TCGTTCACACAACAATACTACTGA 58.166 37.500 0.00 0.00 0.00 3.41
2725 3524 6.274579 TCGTTCACACAACAATACTACTGAA 58.725 36.000 0.00 0.00 0.00 3.02
2726 3525 6.757478 TCGTTCACACAACAATACTACTGAAA 59.243 34.615 0.00 0.00 0.00 2.69
2727 3526 7.278203 TCGTTCACACAACAATACTACTGAAAA 59.722 33.333 0.00 0.00 0.00 2.29
2728 3527 7.372396 CGTTCACACAACAATACTACTGAAAAC 59.628 37.037 0.00 0.00 0.00 2.43
2729 3528 7.851387 TCACACAACAATACTACTGAAAACA 57.149 32.000 0.00 0.00 0.00 2.83
2730 3529 8.445275 TCACACAACAATACTACTGAAAACAT 57.555 30.769 0.00 0.00 0.00 2.71
2731 3530 8.341903 TCACACAACAATACTACTGAAAACATG 58.658 33.333 0.00 0.00 0.00 3.21
2732 3531 8.128582 CACACAACAATACTACTGAAAACATGT 58.871 33.333 0.00 0.00 0.00 3.21
2733 3532 9.332502 ACACAACAATACTACTGAAAACATGTA 57.667 29.630 0.00 0.00 0.00 2.29
2734 3533 9.594038 CACAACAATACTACTGAAAACATGTAC 57.406 33.333 0.00 0.00 0.00 2.90
2735 3534 9.555727 ACAACAATACTACTGAAAACATGTACT 57.444 29.630 0.00 0.00 0.00 2.73
2743 3542 9.841295 ACTACTGAAAACATGTACTTAAGGAAA 57.159 29.630 7.53 0.00 0.00 3.13
2745 3544 8.514330 ACTGAAAACATGTACTTAAGGAAACA 57.486 30.769 7.53 8.53 0.00 2.83
2746 3545 8.962679 ACTGAAAACATGTACTTAAGGAAACAA 58.037 29.630 7.53 0.00 0.00 2.83
2747 3546 9.233232 CTGAAAACATGTACTTAAGGAAACAAC 57.767 33.333 7.53 0.00 0.00 3.32
2748 3547 8.740906 TGAAAACATGTACTTAAGGAAACAACA 58.259 29.630 7.53 2.05 0.00 3.33
2749 3548 9.575783 GAAAACATGTACTTAAGGAAACAACAA 57.424 29.630 7.53 0.00 0.00 2.83
2750 3549 9.930693 AAAACATGTACTTAAGGAAACAACAAA 57.069 25.926 7.53 0.00 0.00 2.83
2763 3562 8.587952 AGGAAACAACAAATAACTTTATGCAC 57.412 30.769 0.00 0.00 0.00 4.57
2764 3563 8.200792 AGGAAACAACAAATAACTTTATGCACA 58.799 29.630 0.00 0.00 0.00 4.57
2765 3564 8.821894 GGAAACAACAAATAACTTTATGCACAA 58.178 29.630 0.00 0.00 0.00 3.33
2766 3565 9.631639 GAAACAACAAATAACTTTATGCACAAC 57.368 29.630 0.00 0.00 0.00 3.32
2767 3566 8.709386 AACAACAAATAACTTTATGCACAACA 57.291 26.923 0.00 0.00 0.00 3.33
2768 3567 8.709386 ACAACAAATAACTTTATGCACAACAA 57.291 26.923 0.00 0.00 0.00 2.83
2769 3568 9.323985 ACAACAAATAACTTTATGCACAACAAT 57.676 25.926 0.00 0.00 0.00 2.71
2777 3576 8.615878 AACTTTATGCACAACAATACTACTGA 57.384 30.769 0.00 0.00 0.00 3.41
2778 3577 8.029642 ACTTTATGCACAACAATACTACTGAC 57.970 34.615 0.00 0.00 0.00 3.51
2779 3578 7.659799 ACTTTATGCACAACAATACTACTGACA 59.340 33.333 0.00 0.00 0.00 3.58
2780 3579 7.971183 TTATGCACAACAATACTACTGACAA 57.029 32.000 0.00 0.00 0.00 3.18
2781 3580 8.560355 TTATGCACAACAATACTACTGACAAT 57.440 30.769 0.00 0.00 0.00 2.71
2782 3581 9.660180 TTATGCACAACAATACTACTGACAATA 57.340 29.630 0.00 0.00 0.00 1.90
2783 3582 7.971183 TGCACAACAATACTACTGACAATAA 57.029 32.000 0.00 0.00 0.00 1.40
2784 3583 8.384607 TGCACAACAATACTACTGACAATAAA 57.615 30.769 0.00 0.00 0.00 1.40
2785 3584 9.008965 TGCACAACAATACTACTGACAATAAAT 57.991 29.630 0.00 0.00 0.00 1.40
2799 3598 9.574516 ACTGACAATAAATACAGAAACCTTCTT 57.425 29.630 0.00 0.00 38.11 2.52
2801 3600 9.567776 TGACAATAAATACAGAAACCTTCTTCA 57.432 29.630 0.00 0.00 38.11 3.02
2802 3601 9.827411 GACAATAAATACAGAAACCTTCTTCAC 57.173 33.333 0.00 0.00 38.11 3.18
2803 3602 9.349713 ACAATAAATACAGAAACCTTCTTCACA 57.650 29.630 0.00 0.00 38.11 3.58
2807 3606 7.881775 AATACAGAAACCTTCTTCACAAAGT 57.118 32.000 0.00 0.00 38.11 2.66
2808 3607 5.567138 ACAGAAACCTTCTTCACAAAGTG 57.433 39.130 0.00 0.00 38.11 3.16
2809 3608 5.253330 ACAGAAACCTTCTTCACAAAGTGA 58.747 37.500 0.00 0.00 41.09 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.037160 TTGCCAGCTGAGATGAGCAA 59.963 50.000 17.39 17.84 41.83 3.91
113 114 6.790285 AAAAATGCAGCAAACTAAAGATGG 57.210 33.333 0.00 0.00 0.00 3.51
179 181 4.447724 GCGAATTATATTGACAGGAGCGAA 59.552 41.667 0.00 0.00 0.00 4.70
198 208 1.031571 GCAATGGAGTGGATGGCGAA 61.032 55.000 0.00 0.00 0.00 4.70
243 253 6.283161 GGCACCACTAAAACGTCTTATATC 57.717 41.667 0.00 0.00 0.00 1.63
283 490 1.692411 ACAAGAGCCCCAAACAAGTC 58.308 50.000 0.00 0.00 0.00 3.01
326 533 2.594303 CAACTGTGGCCCAAGCGA 60.594 61.111 0.00 0.00 41.24 4.93
359 566 1.607178 CCATGCCCAACAGCCAGAA 60.607 57.895 0.00 0.00 0.00 3.02
434 644 8.421249 AATGAGGTTCCAACAATATGAAAGAA 57.579 30.769 0.00 0.00 0.00 2.52
435 645 7.890127 AGAATGAGGTTCCAACAATATGAAAGA 59.110 33.333 0.00 0.00 37.56 2.52
444 654 5.200483 ACTTCAAGAATGAGGTTCCAACAA 58.800 37.500 0.00 0.00 42.67 2.83
469 679 4.066490 TGAATACAACCCCTTACACGTTG 58.934 43.478 0.00 0.00 42.05 4.10
539 1239 4.092968 ACACGCCACTTTTCTCGATAAATC 59.907 41.667 0.00 0.00 0.00 2.17
542 1242 3.034721 ACACGCCACTTTTCTCGATAA 57.965 42.857 0.00 0.00 0.00 1.75
543 1243 2.736144 ACACGCCACTTTTCTCGATA 57.264 45.000 0.00 0.00 0.00 2.92
545 1245 1.658994 AAACACGCCACTTTTCTCGA 58.341 45.000 0.00 0.00 0.00 4.04
546 1246 2.108700 CAAAACACGCCACTTTTCTCG 58.891 47.619 0.00 0.00 0.00 4.04
547 1247 2.159296 ACCAAAACACGCCACTTTTCTC 60.159 45.455 0.00 0.00 0.00 2.87
548 1248 1.822371 ACCAAAACACGCCACTTTTCT 59.178 42.857 0.00 0.00 0.00 2.52
549 1249 1.923864 CACCAAAACACGCCACTTTTC 59.076 47.619 0.00 0.00 0.00 2.29
550 1250 1.546476 TCACCAAAACACGCCACTTTT 59.454 42.857 0.00 0.00 0.00 2.27
551 1251 1.178276 TCACCAAAACACGCCACTTT 58.822 45.000 0.00 0.00 0.00 2.66
561 1261 7.535489 AATCTACGCTTAGTATCACCAAAAC 57.465 36.000 0.00 0.00 34.34 2.43
574 1282 1.395608 GCCGTGCAAAATCTACGCTTA 59.604 47.619 0.00 0.00 36.56 3.09
577 1285 1.226295 GGCCGTGCAAAATCTACGC 60.226 57.895 0.00 0.00 36.56 4.42
579 1287 1.303091 ACGGGCCGTGCAAAATCTAC 61.303 55.000 33.71 0.00 39.18 2.59
595 1303 1.291184 ACATGTCACGCATCACACGG 61.291 55.000 0.00 0.00 35.19 4.94
628 1345 1.517475 GGCGTTGTGTGCGGTTTTT 60.517 52.632 0.00 0.00 0.00 1.94
634 1351 4.671549 CTGCTGGCGTTGTGTGCG 62.672 66.667 0.00 0.00 0.00 5.34
649 1366 1.595466 GATGGAGGATGCAGCTTCTG 58.405 55.000 14.08 0.00 42.42 3.02
655 1372 3.535561 ACTTTAACGATGGAGGATGCAG 58.464 45.455 0.00 0.00 42.42 4.41
657 1374 8.251721 AGTATATACTTTAACGATGGAGGATGC 58.748 37.037 9.71 0.00 31.13 3.91
661 1393 7.249147 CGGAGTATATACTTTAACGATGGAGG 58.751 42.308 16.46 0.00 36.50 4.30
672 1412 6.655003 CCCAATTGATGCGGAGTATATACTTT 59.345 38.462 16.46 1.34 36.50 2.66
674 1414 5.248477 ACCCAATTGATGCGGAGTATATACT 59.752 40.000 15.37 15.37 39.71 2.12
675 1415 5.488341 ACCCAATTGATGCGGAGTATATAC 58.512 41.667 7.12 4.60 28.93 1.47
676 1416 5.755409 ACCCAATTGATGCGGAGTATATA 57.245 39.130 7.12 0.00 28.93 0.86
677 1417 4.640771 ACCCAATTGATGCGGAGTATAT 57.359 40.909 7.12 0.00 28.93 0.86
678 1418 5.247337 TCATACCCAATTGATGCGGAGTATA 59.753 40.000 7.12 0.00 28.93 1.47
679 1419 4.041567 TCATACCCAATTGATGCGGAGTAT 59.958 41.667 7.12 0.28 33.83 2.12
680 1420 3.389656 TCATACCCAATTGATGCGGAGTA 59.610 43.478 7.12 0.00 0.00 2.59
681 1421 2.172505 TCATACCCAATTGATGCGGAGT 59.827 45.455 7.12 0.00 0.00 3.85
682 1422 2.810274 CTCATACCCAATTGATGCGGAG 59.190 50.000 7.12 4.67 0.00 4.63
683 1423 2.172505 ACTCATACCCAATTGATGCGGA 59.827 45.455 7.12 0.00 0.00 5.54
684 1424 2.575532 ACTCATACCCAATTGATGCGG 58.424 47.619 7.12 1.64 0.00 5.69
685 1425 4.024893 GTGTACTCATACCCAATTGATGCG 60.025 45.833 7.12 0.60 0.00 4.73
686 1426 5.008019 CAGTGTACTCATACCCAATTGATGC 59.992 44.000 7.12 0.00 0.00 3.91
687 1427 5.008019 GCAGTGTACTCATACCCAATTGATG 59.992 44.000 7.12 3.07 0.00 3.07
688 1428 5.126067 GCAGTGTACTCATACCCAATTGAT 58.874 41.667 7.12 0.00 0.00 2.57
689 1429 4.019771 TGCAGTGTACTCATACCCAATTGA 60.020 41.667 7.12 0.00 0.00 2.57
690 1430 4.260985 TGCAGTGTACTCATACCCAATTG 58.739 43.478 0.00 0.00 0.00 2.32
691 1431 4.568072 TGCAGTGTACTCATACCCAATT 57.432 40.909 0.00 0.00 0.00 2.32
692 1432 4.410228 AGATGCAGTGTACTCATACCCAAT 59.590 41.667 0.00 0.00 0.00 3.16
693 1433 3.774766 AGATGCAGTGTACTCATACCCAA 59.225 43.478 0.00 0.00 0.00 4.12
694 1434 3.374764 AGATGCAGTGTACTCATACCCA 58.625 45.455 0.00 0.00 0.00 4.51
695 1435 4.122776 CAAGATGCAGTGTACTCATACCC 58.877 47.826 0.00 0.00 0.00 3.69
696 1436 4.759782 ACAAGATGCAGTGTACTCATACC 58.240 43.478 0.00 0.00 0.00 2.73
697 1437 5.655488 AGACAAGATGCAGTGTACTCATAC 58.345 41.667 0.00 0.00 0.00 2.39
698 1438 5.418840 TGAGACAAGATGCAGTGTACTCATA 59.581 40.000 16.81 5.55 32.22 2.15
699 1439 4.221482 TGAGACAAGATGCAGTGTACTCAT 59.779 41.667 16.81 0.00 32.22 2.90
700 1440 3.573967 TGAGACAAGATGCAGTGTACTCA 59.426 43.478 16.81 16.81 33.48 3.41
701 1441 3.923461 GTGAGACAAGATGCAGTGTACTC 59.077 47.826 0.00 6.53 0.00 2.59
702 1442 3.306364 GGTGAGACAAGATGCAGTGTACT 60.306 47.826 0.00 0.00 0.00 2.73
703 1443 2.996621 GGTGAGACAAGATGCAGTGTAC 59.003 50.000 0.00 0.00 0.00 2.90
704 1444 2.352715 CGGTGAGACAAGATGCAGTGTA 60.353 50.000 0.00 0.00 0.00 2.90
705 1445 1.606480 CGGTGAGACAAGATGCAGTGT 60.606 52.381 0.00 0.00 0.00 3.55
706 1446 1.073964 CGGTGAGACAAGATGCAGTG 58.926 55.000 0.00 0.00 0.00 3.66
732 1472 1.599071 CTAACGCACGATGAATGGCAT 59.401 47.619 0.00 0.00 40.77 4.40
876 1617 3.123050 GCTCATGCATACACGTGTGATA 58.877 45.455 30.83 12.08 39.41 2.15
888 1629 1.146930 CGTGGGTAGGCTCATGCAT 59.853 57.895 0.00 0.00 41.91 3.96
929 1678 0.185175 GAGGAGAGGAGGGGAGAGAC 59.815 65.000 0.00 0.00 0.00 3.36
930 1679 0.047176 AGAGGAGAGGAGGGGAGAGA 59.953 60.000 0.00 0.00 0.00 3.10
931 1680 0.478507 GAGAGGAGAGGAGGGGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
932 1681 0.996762 GGAGAGGAGAGGAGGGGAGA 60.997 65.000 0.00 0.00 0.00 3.71
933 1682 1.292941 TGGAGAGGAGAGGAGGGGAG 61.293 65.000 0.00 0.00 0.00 4.30
934 1683 1.230650 TGGAGAGGAGAGGAGGGGA 60.231 63.158 0.00 0.00 0.00 4.81
935 1684 1.075600 GTGGAGAGGAGAGGAGGGG 60.076 68.421 0.00 0.00 0.00 4.79
936 1685 1.075600 GGTGGAGAGGAGAGGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
937 1686 0.264359 ATGGTGGAGAGGAGAGGAGG 59.736 60.000 0.00 0.00 0.00 4.30
938 1687 2.176798 AGTATGGTGGAGAGGAGAGGAG 59.823 54.545 0.00 0.00 0.00 3.69
939 1688 2.175931 GAGTATGGTGGAGAGGAGAGGA 59.824 54.545 0.00 0.00 0.00 3.71
952 1701 1.413077 GGGAAAGCGCTAGAGTATGGT 59.587 52.381 12.05 0.00 0.00 3.55
953 1702 1.603172 CGGGAAAGCGCTAGAGTATGG 60.603 57.143 12.05 0.00 0.00 2.74
955 1704 1.688772 TCGGGAAAGCGCTAGAGTAT 58.311 50.000 12.05 0.00 0.00 2.12
956 1705 1.133790 GTTCGGGAAAGCGCTAGAGTA 59.866 52.381 12.05 0.00 0.00 2.59
957 1706 0.108756 GTTCGGGAAAGCGCTAGAGT 60.109 55.000 12.05 0.00 0.00 3.24
958 1707 0.108804 TGTTCGGGAAAGCGCTAGAG 60.109 55.000 12.05 0.56 0.00 2.43
959 1708 0.389426 GTGTTCGGGAAAGCGCTAGA 60.389 55.000 12.05 2.56 0.00 2.43
961 1710 0.249953 TTGTGTTCGGGAAAGCGCTA 60.250 50.000 12.05 0.00 0.00 4.26
962 1711 1.098712 TTTGTGTTCGGGAAAGCGCT 61.099 50.000 2.64 2.64 0.00 5.92
963 1712 0.248702 TTTTGTGTTCGGGAAAGCGC 60.249 50.000 0.00 0.00 0.00 5.92
965 1714 2.727777 GAGTTTTGTGTTCGGGAAAGC 58.272 47.619 0.00 0.00 0.00 3.51
967 1716 1.064357 GCGAGTTTTGTGTTCGGGAAA 59.936 47.619 0.00 0.00 35.05 3.13
969 1718 0.462225 TGCGAGTTTTGTGTTCGGGA 60.462 50.000 0.00 0.00 35.05 5.14
970 1719 0.316689 GTGCGAGTTTTGTGTTCGGG 60.317 55.000 0.00 0.00 35.05 5.14
971 1720 0.375454 TGTGCGAGTTTTGTGTTCGG 59.625 50.000 0.00 0.00 35.05 4.30
973 1722 1.202132 TGCTGTGCGAGTTTTGTGTTC 60.202 47.619 0.00 0.00 0.00 3.18
1277 2051 2.435059 GCGTGAGGAACAGCTCCC 60.435 66.667 0.00 0.00 46.81 4.30
1568 2343 3.305897 GCACGAACCAAGAAACCAAAAAG 59.694 43.478 0.00 0.00 0.00 2.27
1572 2347 1.133407 GTGCACGAACCAAGAAACCAA 59.867 47.619 0.00 0.00 0.00 3.67
1573 2348 0.736053 GTGCACGAACCAAGAAACCA 59.264 50.000 0.00 0.00 0.00 3.67
1589 2364 3.097728 CGACACGACACTCGGTGC 61.098 66.667 4.23 0.00 45.59 5.01
1605 2385 3.863424 ACGTTACAATCATCAGTAAGCCG 59.137 43.478 0.00 0.00 31.45 5.52
1617 2397 0.802494 CCTGCACCCACGTTACAATC 59.198 55.000 0.00 0.00 0.00 2.67
1619 2399 0.816018 CACCTGCACCCACGTTACAA 60.816 55.000 0.00 0.00 0.00 2.41
1621 2401 1.227734 ACACCTGCACCCACGTTAC 60.228 57.895 0.00 0.00 0.00 2.50
1623 2403 2.515991 CACACCTGCACCCACGTT 60.516 61.111 0.00 0.00 0.00 3.99
1625 2405 4.248842 TCCACACCTGCACCCACG 62.249 66.667 0.00 0.00 0.00 4.94
1667 2447 0.908198 CCCTGTTCTCCCTCTCCTTG 59.092 60.000 0.00 0.00 0.00 3.61
1683 2463 4.530857 GCCGCTCATGTACGCCCT 62.531 66.667 4.87 0.00 0.00 5.19
1754 2534 1.228003 ATCGACCTCGCGGATCTCT 60.228 57.895 6.13 0.00 39.60 3.10
1945 2735 4.250464 CCACTGCCTATACTGTTTTTCGA 58.750 43.478 0.00 0.00 0.00 3.71
2081 2880 2.222819 CGCCGAGTGCTTGTTTATCTTC 60.223 50.000 0.00 0.00 38.05 2.87
2129 2928 9.384764 GGTTCTGTATTAGTTTCAGCTTCTTAT 57.615 33.333 0.00 0.00 0.00 1.73
2130 2929 7.822822 GGGTTCTGTATTAGTTTCAGCTTCTTA 59.177 37.037 0.00 0.00 0.00 2.10
2149 2948 2.556622 AGTATTTGTTTGCGGGGTTCTG 59.443 45.455 0.00 0.00 0.00 3.02
2150 2949 2.871453 AGTATTTGTTTGCGGGGTTCT 58.129 42.857 0.00 0.00 0.00 3.01
2151 2950 3.571571 GAAGTATTTGTTTGCGGGGTTC 58.428 45.455 0.00 0.00 0.00 3.62
2152 2951 2.297880 GGAAGTATTTGTTTGCGGGGTT 59.702 45.455 0.00 0.00 0.00 4.11
2153 2952 1.890489 GGAAGTATTTGTTTGCGGGGT 59.110 47.619 0.00 0.00 0.00 4.95
2154 2953 2.163613 GAGGAAGTATTTGTTTGCGGGG 59.836 50.000 0.00 0.00 0.00 5.73
2157 2956 2.482721 ACGGAGGAAGTATTTGTTTGCG 59.517 45.455 0.00 0.00 0.00 4.85
2158 2957 3.119955 GGACGGAGGAAGTATTTGTTTGC 60.120 47.826 0.00 0.00 0.00 3.68
2159 2958 3.124636 CGGACGGAGGAAGTATTTGTTTG 59.875 47.826 0.00 0.00 0.00 2.93
2161 2960 2.933928 GCGGACGGAGGAAGTATTTGTT 60.934 50.000 0.00 0.00 0.00 2.83
2163 2962 1.134788 AGCGGACGGAGGAAGTATTTG 60.135 52.381 0.00 0.00 0.00 2.32
2165 2964 1.192428 AAGCGGACGGAGGAAGTATT 58.808 50.000 0.00 0.00 0.00 1.89
2166 2965 1.192428 AAAGCGGACGGAGGAAGTAT 58.808 50.000 0.00 0.00 0.00 2.12
2167 2966 0.971386 AAAAGCGGACGGAGGAAGTA 59.029 50.000 0.00 0.00 0.00 2.24
2168 2967 0.108019 AAAAAGCGGACGGAGGAAGT 59.892 50.000 0.00 0.00 0.00 3.01
2171 2970 0.601841 GTCAAAAAGCGGACGGAGGA 60.602 55.000 0.00 0.00 0.00 3.71
2172 2971 0.882927 TGTCAAAAAGCGGACGGAGG 60.883 55.000 0.00 0.00 36.83 4.30
2173 2972 1.156736 ATGTCAAAAAGCGGACGGAG 58.843 50.000 0.00 0.00 36.83 4.63
2175 2974 1.001815 ACAATGTCAAAAAGCGGACGG 60.002 47.619 0.00 0.00 36.83 4.79
2176 2975 2.399396 ACAATGTCAAAAAGCGGACG 57.601 45.000 0.00 0.00 36.83 4.79
2179 2978 3.502211 AGGAGTACAATGTCAAAAAGCGG 59.498 43.478 0.00 0.00 0.00 5.52
2181 2980 6.319141 AGAAGGAGTACAATGTCAAAAAGC 57.681 37.500 0.00 0.00 0.00 3.51
2255 3054 9.924650 AGTGATCTAAACGTTCTTATGTAAACT 57.075 29.630 0.00 0.00 0.00 2.66
2260 3059 9.924650 ACTTTAGTGATCTAAACGTTCTTATGT 57.075 29.630 0.00 0.00 40.05 2.29
2267 3066 9.631452 GGTTACTACTTTAGTGATCTAAACGTT 57.369 33.333 0.00 0.00 40.05 3.99
2268 3067 8.246871 GGGTTACTACTTTAGTGATCTAAACGT 58.753 37.037 0.00 0.00 40.05 3.99
2269 3068 8.246180 TGGGTTACTACTTTAGTGATCTAAACG 58.754 37.037 0.00 0.00 40.05 3.60
2270 3069 9.933723 TTGGGTTACTACTTTAGTGATCTAAAC 57.066 33.333 0.00 0.00 40.05 2.01
2272 3071 9.933723 GTTTGGGTTACTACTTTAGTGATCTAA 57.066 33.333 0.00 0.00 39.81 2.10
2273 3072 8.246180 CGTTTGGGTTACTACTTTAGTGATCTA 58.754 37.037 0.00 0.00 39.81 1.98
2274 3073 7.095270 CGTTTGGGTTACTACTTTAGTGATCT 58.905 38.462 0.00 0.00 39.81 2.75
2275 3074 6.183360 GCGTTTGGGTTACTACTTTAGTGATC 60.183 42.308 0.00 0.00 39.81 2.92
2276 3075 5.640783 GCGTTTGGGTTACTACTTTAGTGAT 59.359 40.000 0.00 0.00 39.81 3.06
2277 3076 4.990426 GCGTTTGGGTTACTACTTTAGTGA 59.010 41.667 0.00 0.00 39.81 3.41
2278 3077 4.992951 AGCGTTTGGGTTACTACTTTAGTG 59.007 41.667 0.00 0.00 39.81 2.74
2279 3078 5.011431 AGAGCGTTTGGGTTACTACTTTAGT 59.989 40.000 0.00 0.00 42.68 2.24
2280 3079 5.476614 AGAGCGTTTGGGTTACTACTTTAG 58.523 41.667 0.00 0.00 0.00 1.85
2281 3080 5.473066 AGAGCGTTTGGGTTACTACTTTA 57.527 39.130 0.00 0.00 0.00 1.85
2282 3081 4.347360 AGAGCGTTTGGGTTACTACTTT 57.653 40.909 0.00 0.00 0.00 2.66
2283 3082 4.347360 AAGAGCGTTTGGGTTACTACTT 57.653 40.909 0.00 0.00 0.00 2.24
2284 3083 5.672421 ATAAGAGCGTTTGGGTTACTACT 57.328 39.130 0.00 0.00 0.00 2.57
2285 3084 9.189723 CTAATATAAGAGCGTTTGGGTTACTAC 57.810 37.037 0.00 0.00 0.00 2.73
2286 3085 8.917088 ACTAATATAAGAGCGTTTGGGTTACTA 58.083 33.333 0.00 0.00 0.00 1.82
2287 3086 7.789026 ACTAATATAAGAGCGTTTGGGTTACT 58.211 34.615 0.00 0.00 0.00 2.24
2288 3087 8.429493 AACTAATATAAGAGCGTTTGGGTTAC 57.571 34.615 0.00 0.00 0.00 2.50
2290 3089 7.933215 AAACTAATATAAGAGCGTTTGGGTT 57.067 32.000 0.00 0.00 0.00 4.11
2291 3090 7.223387 CGTAAACTAATATAAGAGCGTTTGGGT 59.777 37.037 0.00 0.00 0.00 4.51
2292 3091 7.306983 CCGTAAACTAATATAAGAGCGTTTGGG 60.307 40.741 0.00 0.00 0.00 4.12
2293 3092 7.436080 TCCGTAAACTAATATAAGAGCGTTTGG 59.564 37.037 0.00 0.00 0.00 3.28
2294 3093 8.343974 TCCGTAAACTAATATAAGAGCGTTTG 57.656 34.615 0.00 0.00 0.00 2.93
2295 3094 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
2296 3095 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
2297 3096 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
2298 3097 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
2299 3098 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2300 3099 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2301 3100 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
2302 3101 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
2304 3103 9.726438 GTAGTACTCCCTCCGTAAACTAATATA 57.274 37.037 0.00 0.00 0.00 0.86
2305 3104 8.443979 AGTAGTACTCCCTCCGTAAACTAATAT 58.556 37.037 0.00 0.00 0.00 1.28
2306 3105 7.716998 CAGTAGTACTCCCTCCGTAAACTAATA 59.283 40.741 0.00 0.00 0.00 0.98
2307 3106 6.545298 CAGTAGTACTCCCTCCGTAAACTAAT 59.455 42.308 0.00 0.00 0.00 1.73
2308 3107 5.882557 CAGTAGTACTCCCTCCGTAAACTAA 59.117 44.000 0.00 0.00 0.00 2.24
2309 3108 5.189736 TCAGTAGTACTCCCTCCGTAAACTA 59.810 44.000 0.00 0.00 0.00 2.24
2310 3109 4.018960 TCAGTAGTACTCCCTCCGTAAACT 60.019 45.833 0.00 0.00 0.00 2.66
2311 3110 4.265073 TCAGTAGTACTCCCTCCGTAAAC 58.735 47.826 0.00 0.00 0.00 2.01
2312 3111 4.574674 TCAGTAGTACTCCCTCCGTAAA 57.425 45.455 0.00 0.00 0.00 2.01
2313 3112 4.574674 TTCAGTAGTACTCCCTCCGTAA 57.425 45.455 0.00 0.00 0.00 3.18
2314 3113 4.574674 TTTCAGTAGTACTCCCTCCGTA 57.425 45.455 0.00 0.00 0.00 4.02
2315 3114 3.446442 TTTCAGTAGTACTCCCTCCGT 57.554 47.619 0.00 0.00 0.00 4.69
2316 3115 3.508793 TGTTTTCAGTAGTACTCCCTCCG 59.491 47.826 0.00 0.00 0.00 4.63
2317 3116 5.221581 TGTTGTTTTCAGTAGTACTCCCTCC 60.222 44.000 0.00 0.00 0.00 4.30
2318 3117 5.850614 TGTTGTTTTCAGTAGTACTCCCTC 58.149 41.667 0.00 0.00 0.00 4.30
2319 3118 5.881923 TGTTGTTTTCAGTAGTACTCCCT 57.118 39.130 0.00 0.00 0.00 4.20
2320 3119 6.930667 TTTGTTGTTTTCAGTAGTACTCCC 57.069 37.500 0.00 0.00 0.00 4.30
2321 3120 9.269453 AGTATTTGTTGTTTTCAGTAGTACTCC 57.731 33.333 0.00 0.00 0.00 3.85
2397 3196 9.294030 GCAGAAGGTTTATGTATTCATTTTCAG 57.706 33.333 0.00 0.00 35.70 3.02
2398 3197 8.801299 TGCAGAAGGTTTATGTATTCATTTTCA 58.199 29.630 0.00 0.00 35.70 2.69
2399 3198 9.076596 GTGCAGAAGGTTTATGTATTCATTTTC 57.923 33.333 0.00 0.00 35.70 2.29
2400 3199 8.584157 TGTGCAGAAGGTTTATGTATTCATTTT 58.416 29.630 0.00 0.00 35.70 1.82
2401 3200 8.121305 TGTGCAGAAGGTTTATGTATTCATTT 57.879 30.769 0.00 0.00 35.70 2.32
2402 3201 7.701539 TGTGCAGAAGGTTTATGTATTCATT 57.298 32.000 0.00 0.00 35.70 2.57
2403 3202 7.176515 TGTTGTGCAGAAGGTTTATGTATTCAT 59.823 33.333 0.00 0.00 38.00 2.57
2404 3203 6.488344 TGTTGTGCAGAAGGTTTATGTATTCA 59.512 34.615 0.00 0.00 0.00 2.57
2409 3208 5.789643 ATTGTTGTGCAGAAGGTTTATGT 57.210 34.783 0.00 0.00 0.00 2.29
2446 3245 5.892348 AGATTTGTTTCCAGGGTTCTGTAT 58.108 37.500 0.00 0.00 39.31 2.29
2452 3251 2.890945 CGGAAGATTTGTTTCCAGGGTT 59.109 45.455 5.03 0.00 43.46 4.11
2457 3256 5.584253 TGTTTTCGGAAGATTTGTTTCCA 57.416 34.783 5.03 0.00 43.46 3.53
2469 3268 7.282675 TGTTTCCTTAAGTACATGTTTTCGGAA 59.717 33.333 2.30 11.67 0.00 4.30
2470 3269 6.766944 TGTTTCCTTAAGTACATGTTTTCGGA 59.233 34.615 2.30 6.65 0.00 4.55
2471 3270 6.961576 TGTTTCCTTAAGTACATGTTTTCGG 58.038 36.000 2.30 4.50 0.00 4.30
2488 3287 7.151976 GTGCATAAGGTTATTTGTTGTTTCCT 58.848 34.615 0.00 0.00 0.00 3.36
2513 3312 1.508088 GCAAGCCGGATCCTTGTTG 59.492 57.895 18.01 10.82 41.27 3.33
2514 3313 1.678970 GGCAAGCCGGATCCTTGTT 60.679 57.895 18.01 0.00 41.27 2.83
2519 3318 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
2520 3319 1.997928 GAAAGCAGGCAAGCCGGATC 61.998 60.000 15.46 5.98 41.95 3.36
2521 3320 2.036256 AAAGCAGGCAAGCCGGAT 59.964 55.556 15.46 5.71 41.95 4.18
2522 3321 2.672996 GAAAGCAGGCAAGCCGGA 60.673 61.111 15.46 0.00 41.95 5.14
2523 3322 1.880819 AATGAAAGCAGGCAAGCCGG 61.881 55.000 6.88 6.88 41.95 6.13
2524 3323 0.457337 GAATGAAAGCAGGCAAGCCG 60.457 55.000 5.28 2.12 41.95 5.52
2525 3324 0.457337 CGAATGAAAGCAGGCAAGCC 60.457 55.000 2.02 2.02 34.23 4.35
2526 3325 0.242017 ACGAATGAAAGCAGGCAAGC 59.758 50.000 0.00 0.00 0.00 4.01
2527 3326 4.346129 GAATACGAATGAAAGCAGGCAAG 58.654 43.478 0.00 0.00 0.00 4.01
2528 3327 3.128589 GGAATACGAATGAAAGCAGGCAA 59.871 43.478 0.00 0.00 0.00 4.52
2529 3328 2.682856 GGAATACGAATGAAAGCAGGCA 59.317 45.455 0.00 0.00 0.00 4.75
2530 3329 2.945668 AGGAATACGAATGAAAGCAGGC 59.054 45.455 0.00 0.00 0.00 4.85
2531 3330 5.360591 AGTAGGAATACGAATGAAAGCAGG 58.639 41.667 0.00 0.00 0.00 4.85
2532 3331 6.535150 TGAAGTAGGAATACGAATGAAAGCAG 59.465 38.462 0.00 0.00 0.00 4.24
2533 3332 6.403049 TGAAGTAGGAATACGAATGAAAGCA 58.597 36.000 0.00 0.00 0.00 3.91
2534 3333 6.903883 TGAAGTAGGAATACGAATGAAAGC 57.096 37.500 0.00 0.00 0.00 3.51
2535 3334 7.928706 AGGATGAAGTAGGAATACGAATGAAAG 59.071 37.037 0.00 0.00 0.00 2.62
2536 3335 7.710907 CAGGATGAAGTAGGAATACGAATGAAA 59.289 37.037 0.00 0.00 39.69 2.69
2537 3336 7.147724 ACAGGATGAAGTAGGAATACGAATGAA 60.148 37.037 0.00 0.00 39.69 2.57
2538 3337 6.323996 ACAGGATGAAGTAGGAATACGAATGA 59.676 38.462 0.00 0.00 39.69 2.57
2539 3338 6.422100 CACAGGATGAAGTAGGAATACGAATG 59.578 42.308 0.00 0.00 39.69 2.67
2540 3339 6.323996 TCACAGGATGAAGTAGGAATACGAAT 59.676 38.462 0.00 0.00 39.69 3.34
2541 3340 5.655090 TCACAGGATGAAGTAGGAATACGAA 59.345 40.000 0.00 0.00 39.69 3.85
2542 3341 5.067413 GTCACAGGATGAAGTAGGAATACGA 59.933 44.000 0.00 0.00 39.72 3.43
2543 3342 5.067936 AGTCACAGGATGAAGTAGGAATACG 59.932 44.000 0.00 0.00 39.72 3.06
2544 3343 6.127310 ACAGTCACAGGATGAAGTAGGAATAC 60.127 42.308 0.00 0.00 39.72 1.89
2545 3344 5.958380 ACAGTCACAGGATGAAGTAGGAATA 59.042 40.000 0.00 0.00 39.72 1.75
2546 3345 4.780021 ACAGTCACAGGATGAAGTAGGAAT 59.220 41.667 0.00 0.00 39.72 3.01
2547 3346 4.160329 ACAGTCACAGGATGAAGTAGGAA 58.840 43.478 0.00 0.00 39.72 3.36
2548 3347 3.764434 GACAGTCACAGGATGAAGTAGGA 59.236 47.826 0.00 0.00 39.72 2.94
2549 3348 3.766591 AGACAGTCACAGGATGAAGTAGG 59.233 47.826 2.66 0.00 39.72 3.18
2550 3349 5.398603 AAGACAGTCACAGGATGAAGTAG 57.601 43.478 2.66 0.00 39.72 2.57
2551 3350 5.808366 AAAGACAGTCACAGGATGAAGTA 57.192 39.130 2.66 0.00 39.72 2.24
2552 3351 4.696479 AAAGACAGTCACAGGATGAAGT 57.304 40.909 2.66 0.00 39.72 3.01
2587 3386 8.975295 CCCTTTAAAATCAGAGGAAAGATGATT 58.025 33.333 0.00 0.00 43.64 2.57
2588 3387 8.339247 TCCCTTTAAAATCAGAGGAAAGATGAT 58.661 33.333 0.00 0.00 35.21 2.45
2589 3388 7.698912 TCCCTTTAAAATCAGAGGAAAGATGA 58.301 34.615 0.00 0.00 30.29 2.92
2590 3389 7.944729 TCCCTTTAAAATCAGAGGAAAGATG 57.055 36.000 0.00 0.00 30.29 2.90
2591 3390 7.562821 CCATCCCTTTAAAATCAGAGGAAAGAT 59.437 37.037 0.00 0.00 30.29 2.40
2592 3391 6.891908 CCATCCCTTTAAAATCAGAGGAAAGA 59.108 38.462 0.00 0.00 30.29 2.52
2593 3392 6.097412 CCCATCCCTTTAAAATCAGAGGAAAG 59.903 42.308 0.00 0.00 0.00 2.62
2594 3393 5.957774 CCCATCCCTTTAAAATCAGAGGAAA 59.042 40.000 0.00 0.00 0.00 3.13
2595 3394 5.518865 CCCATCCCTTTAAAATCAGAGGAA 58.481 41.667 0.00 0.00 0.00 3.36
2596 3395 4.079212 CCCCATCCCTTTAAAATCAGAGGA 60.079 45.833 0.00 0.00 0.00 3.71
2597 3396 4.218312 CCCCATCCCTTTAAAATCAGAGG 58.782 47.826 0.00 0.00 0.00 3.69
2598 3397 4.871822 ACCCCATCCCTTTAAAATCAGAG 58.128 43.478 0.00 0.00 0.00 3.35
2599 3398 4.627741 CGACCCCATCCCTTTAAAATCAGA 60.628 45.833 0.00 0.00 0.00 3.27
2600 3399 3.632145 CGACCCCATCCCTTTAAAATCAG 59.368 47.826 0.00 0.00 0.00 2.90
2601 3400 3.626222 CCGACCCCATCCCTTTAAAATCA 60.626 47.826 0.00 0.00 0.00 2.57
2602 3401 2.956333 CCGACCCCATCCCTTTAAAATC 59.044 50.000 0.00 0.00 0.00 2.17
2603 3402 2.583566 TCCGACCCCATCCCTTTAAAAT 59.416 45.455 0.00 0.00 0.00 1.82
2604 3403 1.994047 TCCGACCCCATCCCTTTAAAA 59.006 47.619 0.00 0.00 0.00 1.52
2605 3404 1.282738 GTCCGACCCCATCCCTTTAAA 59.717 52.381 0.00 0.00 0.00 1.52
2606 3405 0.913924 GTCCGACCCCATCCCTTTAA 59.086 55.000 0.00 0.00 0.00 1.52
2607 3406 0.984432 GGTCCGACCCCATCCCTTTA 60.984 60.000 6.25 0.00 30.04 1.85
2608 3407 2.306384 GGTCCGACCCCATCCCTTT 61.306 63.158 6.25 0.00 30.04 3.11
2609 3408 2.691252 GGTCCGACCCCATCCCTT 60.691 66.667 6.25 0.00 30.04 3.95
2610 3409 1.893588 TAAGGTCCGACCCCATCCCT 61.894 60.000 14.32 0.00 39.75 4.20
2611 3410 0.767060 ATAAGGTCCGACCCCATCCC 60.767 60.000 14.32 0.00 39.75 3.85
2612 3411 1.137697 AATAAGGTCCGACCCCATCC 58.862 55.000 14.32 0.00 39.75 3.51
2613 3412 2.949644 CAAAATAAGGTCCGACCCCATC 59.050 50.000 14.32 0.00 39.75 3.51
2614 3413 2.310647 ACAAAATAAGGTCCGACCCCAT 59.689 45.455 14.32 4.88 39.75 4.00
2615 3414 1.706305 ACAAAATAAGGTCCGACCCCA 59.294 47.619 14.32 2.49 39.75 4.96
2616 3415 2.502142 ACAAAATAAGGTCCGACCCC 57.498 50.000 14.32 0.00 39.75 4.95
2617 3416 3.822167 TGAAACAAAATAAGGTCCGACCC 59.178 43.478 14.32 0.00 39.75 4.46
2618 3417 5.441709 TTGAAACAAAATAAGGTCCGACC 57.558 39.130 9.81 9.81 38.99 4.79
2619 3418 6.674066 TGATTGAAACAAAATAAGGTCCGAC 58.326 36.000 0.00 0.00 0.00 4.79
2620 3419 6.885952 TGATTGAAACAAAATAAGGTCCGA 57.114 33.333 0.00 0.00 0.00 4.55
2621 3420 7.938563 TTTGATTGAAACAAAATAAGGTCCG 57.061 32.000 0.00 0.00 34.89 4.79
2622 3421 9.103861 TGTTTTGATTGAAACAAAATAAGGTCC 57.896 29.630 14.83 3.37 44.13 4.46
2633 3432 7.540400 CGTATATGGCTTGTTTTGATTGAAACA 59.460 33.333 0.00 0.00 45.07 2.83
2634 3433 7.462724 GCGTATATGGCTTGTTTTGATTGAAAC 60.463 37.037 0.00 0.00 39.41 2.78
2635 3434 6.529829 GCGTATATGGCTTGTTTTGATTGAAA 59.470 34.615 0.00 0.00 0.00 2.69
2636 3435 6.033341 GCGTATATGGCTTGTTTTGATTGAA 58.967 36.000 0.00 0.00 0.00 2.69
2637 3436 5.577835 GCGTATATGGCTTGTTTTGATTGA 58.422 37.500 0.00 0.00 0.00 2.57
2638 3437 4.437495 CGCGTATATGGCTTGTTTTGATTG 59.563 41.667 0.00 0.00 0.00 2.67
2639 3438 4.497340 CCGCGTATATGGCTTGTTTTGATT 60.497 41.667 4.92 0.00 0.00 2.57
2640 3439 3.003275 CCGCGTATATGGCTTGTTTTGAT 59.997 43.478 4.92 0.00 0.00 2.57
2641 3440 2.353269 CCGCGTATATGGCTTGTTTTGA 59.647 45.455 4.92 0.00 0.00 2.69
2642 3441 2.353269 TCCGCGTATATGGCTTGTTTTG 59.647 45.455 4.92 0.00 0.00 2.44
2643 3442 2.634600 TCCGCGTATATGGCTTGTTTT 58.365 42.857 4.92 0.00 0.00 2.43
2644 3443 2.319136 TCCGCGTATATGGCTTGTTT 57.681 45.000 4.92 0.00 0.00 2.83
2645 3444 2.210116 CTTCCGCGTATATGGCTTGTT 58.790 47.619 4.92 0.00 0.00 2.83
2646 3445 1.138266 ACTTCCGCGTATATGGCTTGT 59.862 47.619 4.92 0.00 0.00 3.16
2647 3446 1.865865 ACTTCCGCGTATATGGCTTG 58.134 50.000 4.92 0.00 0.00 4.01
2648 3447 2.363038 TGTACTTCCGCGTATATGGCTT 59.637 45.455 4.92 0.00 0.00 4.35
2649 3448 1.958579 TGTACTTCCGCGTATATGGCT 59.041 47.619 4.92 0.00 0.00 4.75
2650 3449 2.030540 TCTGTACTTCCGCGTATATGGC 60.031 50.000 4.92 0.00 0.00 4.40
2651 3450 3.909776 TCTGTACTTCCGCGTATATGG 57.090 47.619 4.92 0.00 0.00 2.74
2652 3451 4.166523 CCATCTGTACTTCCGCGTATATG 58.833 47.826 4.92 0.00 0.00 1.78
2653 3452 3.192844 CCCATCTGTACTTCCGCGTATAT 59.807 47.826 4.92 0.00 0.00 0.86
2654 3453 2.555325 CCCATCTGTACTTCCGCGTATA 59.445 50.000 4.92 0.00 0.00 1.47
2655 3454 1.340248 CCCATCTGTACTTCCGCGTAT 59.660 52.381 4.92 0.00 0.00 3.06
2656 3455 0.742505 CCCATCTGTACTTCCGCGTA 59.257 55.000 4.92 0.00 0.00 4.42
2657 3456 1.515954 CCCATCTGTACTTCCGCGT 59.484 57.895 4.92 0.00 0.00 6.01
2658 3457 1.883084 GCCCATCTGTACTTCCGCG 60.883 63.158 0.00 0.00 0.00 6.46
2659 3458 1.090052 GTGCCCATCTGTACTTCCGC 61.090 60.000 0.00 0.00 0.00 5.54
2660 3459 0.249120 TGTGCCCATCTGTACTTCCG 59.751 55.000 0.00 0.00 0.00 4.30
2661 3460 1.739067 GTGTGCCCATCTGTACTTCC 58.261 55.000 0.00 0.00 0.00 3.46
2662 3461 1.359848 CGTGTGCCCATCTGTACTTC 58.640 55.000 0.00 0.00 0.00 3.01
2663 3462 0.673644 GCGTGTGCCCATCTGTACTT 60.674 55.000 0.00 0.00 33.98 2.24
2664 3463 1.079127 GCGTGTGCCCATCTGTACT 60.079 57.895 0.00 0.00 33.98 2.73
2665 3464 0.953471 TTGCGTGTGCCCATCTGTAC 60.953 55.000 0.00 0.00 41.78 2.90
2666 3465 0.673333 CTTGCGTGTGCCCATCTGTA 60.673 55.000 0.00 0.00 41.78 2.74
2667 3466 1.968017 CTTGCGTGTGCCCATCTGT 60.968 57.895 0.00 0.00 41.78 3.41
2668 3467 2.693762 CCTTGCGTGTGCCCATCTG 61.694 63.158 0.00 0.00 41.78 2.90
2669 3468 2.360350 CCTTGCGTGTGCCCATCT 60.360 61.111 0.00 0.00 41.78 2.90
2670 3469 3.443045 CCCTTGCGTGTGCCCATC 61.443 66.667 0.00 0.00 41.78 3.51
2676 3475 3.052082 CTGCTCCCCTTGCGTGTG 61.052 66.667 0.00 0.00 0.00 3.82
2677 3476 4.335647 CCTGCTCCCCTTGCGTGT 62.336 66.667 0.00 0.00 0.00 4.49
2681 3480 3.066814 CTTGCCTGCTCCCCTTGC 61.067 66.667 0.00 0.00 0.00 4.01
2682 3481 1.676967 GACTTGCCTGCTCCCCTTG 60.677 63.158 0.00 0.00 0.00 3.61
2683 3482 1.846712 GAGACTTGCCTGCTCCCCTT 61.847 60.000 0.00 0.00 0.00 3.95
2684 3483 2.204059 AGACTTGCCTGCTCCCCT 60.204 61.111 0.00 0.00 0.00 4.79
2685 3484 2.270527 GAGACTTGCCTGCTCCCC 59.729 66.667 0.00 0.00 0.00 4.81
2686 3485 2.125350 CGAGACTTGCCTGCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
2687 3486 1.004440 AACGAGACTTGCCTGCTCC 60.004 57.895 0.00 0.00 0.00 4.70
2688 3487 0.319900 TGAACGAGACTTGCCTGCTC 60.320 55.000 0.00 0.00 0.00 4.26
2689 3488 0.601311 GTGAACGAGACTTGCCTGCT 60.601 55.000 0.00 0.00 0.00 4.24
2690 3489 0.880278 TGTGAACGAGACTTGCCTGC 60.880 55.000 0.00 0.00 0.00 4.85
2691 3490 0.861837 GTGTGAACGAGACTTGCCTG 59.138 55.000 0.00 0.00 0.00 4.85
2692 3491 0.464036 TGTGTGAACGAGACTTGCCT 59.536 50.000 0.00 0.00 0.00 4.75
2693 3492 1.003866 GTTGTGTGAACGAGACTTGCC 60.004 52.381 0.00 0.00 0.00 4.52
2694 3493 1.663643 TGTTGTGTGAACGAGACTTGC 59.336 47.619 0.00 0.00 0.00 4.01
2695 3494 4.536364 ATTGTTGTGTGAACGAGACTTG 57.464 40.909 0.00 0.00 0.00 3.16
2696 3495 5.357257 AGTATTGTTGTGTGAACGAGACTT 58.643 37.500 0.00 0.00 33.62 3.01
2697 3496 4.945246 AGTATTGTTGTGTGAACGAGACT 58.055 39.130 0.00 0.00 32.81 3.24
2698 3497 5.919141 AGTAGTATTGTTGTGTGAACGAGAC 59.081 40.000 0.00 0.00 0.00 3.36
2699 3498 5.918576 CAGTAGTATTGTTGTGTGAACGAGA 59.081 40.000 0.00 0.00 0.00 4.04
2700 3499 5.918576 TCAGTAGTATTGTTGTGTGAACGAG 59.081 40.000 0.00 0.00 0.00 4.18
2701 3500 5.834169 TCAGTAGTATTGTTGTGTGAACGA 58.166 37.500 0.00 0.00 0.00 3.85
2702 3501 6.519353 TTCAGTAGTATTGTTGTGTGAACG 57.481 37.500 0.00 0.00 0.00 3.95
2703 3502 8.178964 TGTTTTCAGTAGTATTGTTGTGTGAAC 58.821 33.333 0.00 0.00 0.00 3.18
2704 3503 8.270080 TGTTTTCAGTAGTATTGTTGTGTGAA 57.730 30.769 0.00 0.00 0.00 3.18
2705 3504 7.851387 TGTTTTCAGTAGTATTGTTGTGTGA 57.149 32.000 0.00 0.00 0.00 3.58
2706 3505 8.128582 ACATGTTTTCAGTAGTATTGTTGTGTG 58.871 33.333 0.00 0.00 0.00 3.82
2707 3506 8.220755 ACATGTTTTCAGTAGTATTGTTGTGT 57.779 30.769 0.00 0.00 0.00 3.72
2708 3507 9.594038 GTACATGTTTTCAGTAGTATTGTTGTG 57.406 33.333 2.30 0.00 0.00 3.33
2709 3508 9.555727 AGTACATGTTTTCAGTAGTATTGTTGT 57.444 29.630 2.30 0.00 0.00 3.32
2717 3516 9.841295 TTTCCTTAAGTACATGTTTTCAGTAGT 57.159 29.630 2.30 0.00 0.00 2.73
2719 3518 9.616156 TGTTTCCTTAAGTACATGTTTTCAGTA 57.384 29.630 2.30 0.00 0.00 2.74
2720 3519 8.514330 TGTTTCCTTAAGTACATGTTTTCAGT 57.486 30.769 2.30 0.00 0.00 3.41
2721 3520 9.233232 GTTGTTTCCTTAAGTACATGTTTTCAG 57.767 33.333 2.30 0.55 0.00 3.02
2722 3521 8.740906 TGTTGTTTCCTTAAGTACATGTTTTCA 58.259 29.630 2.30 0.00 0.00 2.69
2723 3522 9.575783 TTGTTGTTTCCTTAAGTACATGTTTTC 57.424 29.630 2.30 0.00 0.00 2.29
2724 3523 9.930693 TTTGTTGTTTCCTTAAGTACATGTTTT 57.069 25.926 2.30 1.85 0.00 2.43
2737 3536 9.040939 GTGCATAAAGTTATTTGTTGTTTCCTT 57.959 29.630 0.00 0.00 0.00 3.36
2738 3537 8.200792 TGTGCATAAAGTTATTTGTTGTTTCCT 58.799 29.630 0.00 0.00 0.00 3.36
2739 3538 8.359060 TGTGCATAAAGTTATTTGTTGTTTCC 57.641 30.769 0.00 0.00 0.00 3.13
2740 3539 9.631639 GTTGTGCATAAAGTTATTTGTTGTTTC 57.368 29.630 0.00 0.00 0.00 2.78
2741 3540 9.155975 TGTTGTGCATAAAGTTATTTGTTGTTT 57.844 25.926 0.00 0.00 0.00 2.83
2742 3541 8.709386 TGTTGTGCATAAAGTTATTTGTTGTT 57.291 26.923 0.00 0.00 0.00 2.83
2743 3542 8.709386 TTGTTGTGCATAAAGTTATTTGTTGT 57.291 26.923 0.00 0.00 0.00 3.32
2751 3550 9.713713 TCAGTAGTATTGTTGTGCATAAAGTTA 57.286 29.630 0.00 0.00 0.00 2.24
2752 3551 8.504005 GTCAGTAGTATTGTTGTGCATAAAGTT 58.496 33.333 0.00 0.00 0.00 2.66
2753 3552 7.659799 TGTCAGTAGTATTGTTGTGCATAAAGT 59.340 33.333 0.00 0.00 0.00 2.66
2754 3553 8.028540 TGTCAGTAGTATTGTTGTGCATAAAG 57.971 34.615 0.00 0.00 0.00 1.85
2755 3554 7.971183 TGTCAGTAGTATTGTTGTGCATAAA 57.029 32.000 0.00 0.00 0.00 1.40
2756 3555 7.971183 TTGTCAGTAGTATTGTTGTGCATAA 57.029 32.000 0.00 0.00 0.00 1.90
2757 3556 9.660180 TTATTGTCAGTAGTATTGTTGTGCATA 57.340 29.630 0.00 0.00 0.00 3.14
2758 3557 8.560355 TTATTGTCAGTAGTATTGTTGTGCAT 57.440 30.769 0.00 0.00 0.00 3.96
2759 3558 7.971183 TTATTGTCAGTAGTATTGTTGTGCA 57.029 32.000 0.00 0.00 0.00 4.57
2773 3572 9.574516 AAGAAGGTTTCTGTATTTATTGTCAGT 57.425 29.630 0.00 0.00 40.59 3.41
2775 3574 9.567776 TGAAGAAGGTTTCTGTATTTATTGTCA 57.432 29.630 0.00 0.00 40.59 3.58
2776 3575 9.827411 GTGAAGAAGGTTTCTGTATTTATTGTC 57.173 33.333 0.00 0.00 40.59 3.18
2777 3576 9.349713 TGTGAAGAAGGTTTCTGTATTTATTGT 57.650 29.630 0.00 0.00 40.59 2.71
2781 3580 9.403583 ACTTTGTGAAGAAGGTTTCTGTATTTA 57.596 29.630 0.00 0.00 40.59 1.40
2782 3581 8.190784 CACTTTGTGAAGAAGGTTTCTGTATTT 58.809 33.333 0.00 0.00 40.59 1.40
2783 3582 7.556275 TCACTTTGTGAAGAAGGTTTCTGTATT 59.444 33.333 0.00 0.00 39.78 1.89
2784 3583 7.054124 TCACTTTGTGAAGAAGGTTTCTGTAT 58.946 34.615 0.00 0.00 39.78 2.29
2785 3584 6.411376 TCACTTTGTGAAGAAGGTTTCTGTA 58.589 36.000 0.00 0.00 39.78 2.74
2786 3585 5.253330 TCACTTTGTGAAGAAGGTTTCTGT 58.747 37.500 0.00 0.00 39.78 3.41
2787 3586 5.818136 TCACTTTGTGAAGAAGGTTTCTG 57.182 39.130 0.00 0.00 39.78 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.