Multiple sequence alignment - TraesCS5B01G241800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G241800 chr5B 100.000 5028 0 0 1 5028 421640550 421645577 0.000000e+00 9286.0
1 TraesCS5B01G241800 chr5A 91.561 1493 86 19 2416 3879 458199980 458201461 0.000000e+00 2023.0
2 TraesCS5B01G241800 chr5A 89.297 1635 87 34 2419 4031 456060049 456058481 0.000000e+00 1969.0
3 TraesCS5B01G241800 chr5A 89.450 1308 92 28 740 2033 456061876 456060601 0.000000e+00 1609.0
4 TraesCS5B01G241800 chr5A 91.437 689 35 8 740 1409 458197518 458198201 0.000000e+00 924.0
5 TraesCS5B01G241800 chr5A 91.096 438 20 11 4135 4561 456058431 456058002 4.370000e-160 575.0
6 TraesCS5B01G241800 chr5A 89.016 437 42 4 1292 1727 458198445 458198876 2.060000e-148 536.0
7 TraesCS5B01G241800 chr5A 91.392 395 18 9 2036 2419 458199517 458199906 1.240000e-145 527.0
8 TraesCS5B01G241800 chr5A 83.784 407 41 15 4641 5028 458202461 458202861 3.700000e-96 363.0
9 TraesCS5B01G241800 chr5A 91.732 254 19 2 4190 4443 458202122 458202373 8.010000e-93 351.0
10 TraesCS5B01G241800 chr5A 89.416 274 19 5 3912 4176 458201639 458201911 2.240000e-88 337.0
11 TraesCS5B01G241800 chr5A 88.462 234 19 6 4643 4875 456057969 456057743 4.960000e-70 276.0
12 TraesCS5B01G241800 chr5A 83.737 289 37 5 2 281 458195161 458195448 1.070000e-66 265.0
13 TraesCS5B01G241800 chr5A 97.297 148 1 2 1889 2035 458199315 458199460 1.080000e-61 248.0
14 TraesCS5B01G241800 chr5A 94.771 153 8 0 1731 1883 458199043 458199195 6.510000e-59 239.0
15 TraesCS5B01G241800 chr5A 98.333 120 2 0 4909 5028 456034326 456034207 1.420000e-50 211.0
16 TraesCS5B01G241800 chr5A 83.448 145 8 6 2262 2406 456060269 456060141 2.460000e-23 121.0
17 TraesCS5B01G241800 chr5A 100.000 49 0 0 4056 4104 456058482 456058434 1.930000e-14 91.6
18 TraesCS5B01G241800 chr5A 93.103 58 3 1 661 718 458197015 458197071 3.230000e-12 84.2
19 TraesCS5B01G241800 chr5D 86.818 1320 102 35 740 2033 356841776 356843049 0.000000e+00 1408.0
20 TraesCS5B01G241800 chr5D 89.448 815 70 13 2938 3743 356844106 356844913 0.000000e+00 1014.0
21 TraesCS5B01G241800 chr5D 85.833 720 55 28 3756 4457 356844896 356845586 0.000000e+00 721.0
22 TraesCS5B01G241800 chr5D 80.693 606 54 37 4456 5028 356846073 356846648 3.620000e-111 412.0
23 TraesCS5B01G241800 chr5D 89.200 250 23 4 2645 2892 356843863 356844110 4.890000e-80 309.0
24 TraesCS5B01G241800 chr5D 79.939 329 33 18 2118 2419 356843180 356843502 1.420000e-50 211.0
25 TraesCS5B01G241800 chr5D 83.401 247 16 8 2418 2647 356843567 356843805 6.600000e-49 206.0
26 TraesCS5B01G241800 chr5D 82.741 197 29 5 1 194 356840803 356840997 2.410000e-38 171.0
27 TraesCS5B01G241800 chr5D 91.071 56 2 3 1839 1892 211772076 211772130 6.980000e-09 73.1
28 TraesCS5B01G241800 chr5D 96.875 32 1 0 4158 4189 70639900 70639869 3.000000e-03 54.7
29 TraesCS5B01G241800 chr3D 78.417 139 21 7 53 190 543958825 543958955 1.160000e-11 82.4
30 TraesCS5B01G241800 chr3D 91.071 56 2 3 1839 1892 428058523 428058577 6.980000e-09 73.1
31 TraesCS5B01G241800 chr1D 95.918 49 2 0 1836 1884 53403099 53403147 4.170000e-11 80.5
32 TraesCS5B01G241800 chr1D 91.071 56 2 3 1839 1892 472748679 472748733 6.980000e-09 73.1
33 TraesCS5B01G241800 chr6D 91.071 56 2 3 1839 1892 93317818 93317764 6.980000e-09 73.1
34 TraesCS5B01G241800 chr6D 91.071 56 2 3 1839 1892 115754476 115754530 6.980000e-09 73.1
35 TraesCS5B01G241800 chr4D 91.071 56 2 3 1839 1892 50531450 50531396 6.980000e-09 73.1
36 TraesCS5B01G241800 chr4D 91.071 56 2 3 1839 1892 53611879 53611825 6.980000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G241800 chr5B 421640550 421645577 5027 False 9286.000000 9286 100.000000 1 5028 1 chr5B.!!$F1 5027
1 TraesCS5B01G241800 chr5A 456057743 456061876 4133 True 773.600000 1969 90.292167 740 4875 6 chr5A.!!$R2 4135
2 TraesCS5B01G241800 chr5A 458195161 458202861 7700 False 536.109091 2023 90.658727 2 5028 11 chr5A.!!$F1 5026
3 TraesCS5B01G241800 chr5D 356840803 356846648 5845 False 556.500000 1408 84.759125 1 5028 8 chr5D.!!$F2 5027

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
487 1142 0.035317 AACGAGCTCAGTGATTGGCA 59.965 50.0 15.40 0.0 0.0 4.92 F
1387 3070 0.037160 ACGGGGTTAATGCTCGGTTT 59.963 50.0 0.00 0.0 0.0 3.27 F
1388 3071 0.450184 CGGGGTTAATGCTCGGTTTG 59.550 55.0 0.00 0.0 0.0 2.93 F
2918 5529 0.456221 AATCTACAGCTCCACGACCG 59.544 55.0 0.00 0.0 0.0 4.79 F
3413 6034 0.321653 GACTGCCGGGATTGAACTGT 60.322 55.0 2.18 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2244 4649 0.041090 CCCCATGCACCCTTAACCTT 59.959 55.0 0.00 0.00 0.00 3.50 R
3005 5617 0.396435 TGAAGTGGATGCGGACAACT 59.604 50.0 0.00 0.00 0.00 3.16 R
3253 5874 1.747709 CTGGAATGGAGGTGCTTGAG 58.252 55.0 0.00 0.00 0.00 3.02 R
3939 6708 0.037160 TTGCCAGCTGAGATGAGCAA 59.963 50.0 17.39 17.84 41.83 3.91 R
4863 8375 0.047176 AGAGGAGAGGAGGGGAGAGA 59.953 60.0 0.00 0.00 0.00 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.192633 GGAACACAAAATATCGCAACCCT 59.807 43.478 0.00 0.00 0.00 4.34
24 25 4.434713 ACACAAAATATCGCAACCCTTC 57.565 40.909 0.00 0.00 0.00 3.46
25 26 3.119990 ACACAAAATATCGCAACCCTTCG 60.120 43.478 0.00 0.00 0.00 3.79
26 27 3.078837 ACAAAATATCGCAACCCTTCGT 58.921 40.909 0.00 0.00 0.00 3.85
28 29 2.981859 AATATCGCAACCCTTCGTCT 57.018 45.000 0.00 0.00 0.00 4.18
29 30 2.981859 ATATCGCAACCCTTCGTCTT 57.018 45.000 0.00 0.00 0.00 3.01
30 31 2.288961 TATCGCAACCCTTCGTCTTC 57.711 50.000 0.00 0.00 0.00 2.87
31 32 0.736325 ATCGCAACCCTTCGTCTTCG 60.736 55.000 0.00 0.00 38.55 3.79
32 33 2.861006 GCAACCCTTCGTCTTCGC 59.139 61.111 0.00 0.00 36.96 4.70
33 34 1.668151 GCAACCCTTCGTCTTCGCT 60.668 57.895 0.00 0.00 36.96 4.93
34 35 0.389426 GCAACCCTTCGTCTTCGCTA 60.389 55.000 0.00 0.00 36.96 4.26
51 53 2.146073 CTAAACCGGACGTCGTGGGT 62.146 60.000 24.16 20.26 37.11 4.51
91 93 2.802719 ACCTTATTCCAACACGCCATT 58.197 42.857 0.00 0.00 0.00 3.16
94 96 1.832883 TATTCCAACACGCCATTGCT 58.167 45.000 0.00 0.00 34.43 3.91
112 114 0.249120 CTGCCACCACCTTGTCGATA 59.751 55.000 0.00 0.00 0.00 2.92
115 117 1.139058 GCCACCACCTTGTCGATATCT 59.861 52.381 0.34 0.00 0.00 1.98
117 119 2.224066 CCACCACCTTGTCGATATCTCC 60.224 54.545 0.34 0.00 0.00 3.71
118 120 1.681793 ACCACCTTGTCGATATCTCCG 59.318 52.381 0.34 0.00 0.00 4.63
120 122 1.954382 CACCTTGTCGATATCTCCGGA 59.046 52.381 2.93 2.93 0.00 5.14
140 142 6.999871 TCCGGAGAAACAAAAACCTAATAAGT 59.000 34.615 0.00 0.00 0.00 2.24
164 166 5.859205 ATAACAAAATGAGAAGGATGGGC 57.141 39.130 0.00 0.00 0.00 5.36
166 168 2.225343 ACAAAATGAGAAGGATGGGCCA 60.225 45.455 9.61 9.61 40.02 5.36
185 187 3.123620 CACTCCTCTTGCTGCCGC 61.124 66.667 0.00 0.00 0.00 6.53
219 222 2.266055 GCAAGAGGAGTGGGACCG 59.734 66.667 0.00 0.00 0.00 4.79
224 227 3.966930 GAGGAGTGGGACCGAGGCT 62.967 68.421 0.00 0.00 0.00 4.58
225 228 3.462678 GGAGTGGGACCGAGGCTC 61.463 72.222 3.87 3.87 0.00 4.70
226 229 3.827898 GAGTGGGACCGAGGCTCG 61.828 72.222 29.16 29.16 40.07 5.03
239 242 3.793144 GCTCGGCGTGCAGGAAAG 61.793 66.667 26.79 6.34 0.00 2.62
240 243 3.793144 CTCGGCGTGCAGGAAAGC 61.793 66.667 11.29 0.00 0.00 3.51
241 244 4.314440 TCGGCGTGCAGGAAAGCT 62.314 61.111 11.29 0.00 34.99 3.74
245 255 1.654220 GCGTGCAGGAAAGCTTTGA 59.346 52.632 18.30 0.00 34.99 2.69
255 265 0.400594 AAAGCTTTGACGGCTAGGGT 59.599 50.000 11.80 0.00 39.30 4.34
281 291 2.660572 ACCTTATGCACCACACACAAA 58.339 42.857 0.00 0.00 0.00 2.83
282 292 3.027412 ACCTTATGCACCACACACAAAA 58.973 40.909 0.00 0.00 0.00 2.44
285 295 1.189752 ATGCACCACACACAAAACCA 58.810 45.000 0.00 0.00 0.00 3.67
286 296 1.189752 TGCACCACACACAAAACCAT 58.810 45.000 0.00 0.00 0.00 3.55
290 300 4.141846 TGCACCACACACAAAACCATAAAT 60.142 37.500 0.00 0.00 0.00 1.40
291 301 4.447389 GCACCACACACAAAACCATAAATC 59.553 41.667 0.00 0.00 0.00 2.17
292 302 5.738783 GCACCACACACAAAACCATAAATCT 60.739 40.000 0.00 0.00 0.00 2.40
293 303 5.920273 CACCACACACAAAACCATAAATCTC 59.080 40.000 0.00 0.00 0.00 2.75
294 304 5.833131 ACCACACACAAAACCATAAATCTCT 59.167 36.000 0.00 0.00 0.00 3.10
295 305 6.016276 ACCACACACAAAACCATAAATCTCTC 60.016 38.462 0.00 0.00 0.00 3.20
296 306 6.381801 CACACACAAAACCATAAATCTCTCC 58.618 40.000 0.00 0.00 0.00 3.71
297 307 6.207417 CACACACAAAACCATAAATCTCTCCT 59.793 38.462 0.00 0.00 0.00 3.69
298 308 6.431234 ACACACAAAACCATAAATCTCTCCTC 59.569 38.462 0.00 0.00 0.00 3.71
299 309 5.946377 ACACAAAACCATAAATCTCTCCTCC 59.054 40.000 0.00 0.00 0.00 4.30
300 310 5.358160 CACAAAACCATAAATCTCTCCTCCC 59.642 44.000 0.00 0.00 0.00 4.30
301 311 4.797912 AAACCATAAATCTCTCCTCCCC 57.202 45.455 0.00 0.00 0.00 4.81
302 312 3.734344 ACCATAAATCTCTCCTCCCCT 57.266 47.619 0.00 0.00 0.00 4.79
303 313 4.027782 ACCATAAATCTCTCCTCCCCTT 57.972 45.455 0.00 0.00 0.00 3.95
304 314 3.718956 ACCATAAATCTCTCCTCCCCTTG 59.281 47.826 0.00 0.00 0.00 3.61
305 315 3.976654 CCATAAATCTCTCCTCCCCTTGA 59.023 47.826 0.00 0.00 0.00 3.02
306 316 4.413520 CCATAAATCTCTCCTCCCCTTGAA 59.586 45.833 0.00 0.00 0.00 2.69
307 317 5.103940 CCATAAATCTCTCCTCCCCTTGAAA 60.104 44.000 0.00 0.00 0.00 2.69
308 318 6.411320 CCATAAATCTCTCCTCCCCTTGAAAT 60.411 42.308 0.00 0.00 0.00 2.17
309 319 5.542848 AAATCTCTCCTCCCCTTGAAATT 57.457 39.130 0.00 0.00 0.00 1.82
310 320 5.542848 AATCTCTCCTCCCCTTGAAATTT 57.457 39.130 0.00 0.00 0.00 1.82
311 321 6.658555 AATCTCTCCTCCCCTTGAAATTTA 57.341 37.500 0.00 0.00 0.00 1.40
312 322 5.437191 TCTCTCCTCCCCTTGAAATTTAC 57.563 43.478 0.00 0.00 0.00 2.01
313 323 4.227527 TCTCTCCTCCCCTTGAAATTTACC 59.772 45.833 0.00 0.00 0.00 2.85
314 324 3.054655 TCTCCTCCCCTTGAAATTTACCG 60.055 47.826 0.00 0.00 0.00 4.02
315 325 2.645797 TCCTCCCCTTGAAATTTACCGT 59.354 45.455 0.00 0.00 0.00 4.83
316 326 3.014623 CCTCCCCTTGAAATTTACCGTC 58.985 50.000 0.00 0.00 0.00 4.79
317 327 2.676342 CTCCCCTTGAAATTTACCGTCG 59.324 50.000 0.00 0.00 0.00 5.12
318 328 2.038820 TCCCCTTGAAATTTACCGTCGT 59.961 45.455 0.00 0.00 0.00 4.34
319 329 2.160813 CCCCTTGAAATTTACCGTCGTG 59.839 50.000 0.00 0.00 0.00 4.35
320 330 2.160813 CCCTTGAAATTTACCGTCGTGG 59.839 50.000 0.00 0.00 46.41 4.94
335 345 4.484386 TGGTACCCACCCGCTAAT 57.516 55.556 10.07 0.00 45.11 1.73
336 346 2.214235 TGGTACCCACCCGCTAATC 58.786 57.895 10.07 0.00 45.11 1.75
337 347 0.325860 TGGTACCCACCCGCTAATCT 60.326 55.000 10.07 0.00 45.11 2.40
338 348 0.835276 GGTACCCACCCGCTAATCTT 59.165 55.000 0.00 0.00 39.11 2.40
339 349 2.041701 GGTACCCACCCGCTAATCTTA 58.958 52.381 0.00 0.00 39.11 2.10
340 350 2.435437 GGTACCCACCCGCTAATCTTAA 59.565 50.000 0.00 0.00 39.11 1.85
341 351 3.118298 GGTACCCACCCGCTAATCTTAAA 60.118 47.826 0.00 0.00 39.11 1.52
342 352 3.945640 ACCCACCCGCTAATCTTAAAT 57.054 42.857 0.00 0.00 0.00 1.40
343 353 3.816994 ACCCACCCGCTAATCTTAAATC 58.183 45.455 0.00 0.00 0.00 2.17
344 354 3.201266 ACCCACCCGCTAATCTTAAATCA 59.799 43.478 0.00 0.00 0.00 2.57
345 355 4.204012 CCCACCCGCTAATCTTAAATCAA 58.796 43.478 0.00 0.00 0.00 2.57
346 356 4.827284 CCCACCCGCTAATCTTAAATCAAT 59.173 41.667 0.00 0.00 0.00 2.57
347 357 6.001460 CCCACCCGCTAATCTTAAATCAATA 58.999 40.000 0.00 0.00 0.00 1.90
348 358 6.149474 CCCACCCGCTAATCTTAAATCAATAG 59.851 42.308 0.00 0.00 0.00 1.73
349 359 6.934645 CCACCCGCTAATCTTAAATCAATAGA 59.065 38.462 0.00 0.00 0.00 1.98
350 360 7.607991 CCACCCGCTAATCTTAAATCAATAGAT 59.392 37.037 0.00 0.00 35.53 1.98
351 361 9.003658 CACCCGCTAATCTTAAATCAATAGATT 57.996 33.333 0.00 0.00 46.20 2.40
362 372 5.741388 AATCAATAGATTTGCTCCACGTC 57.259 39.130 0.00 0.00 41.64 4.34
363 373 4.200838 TCAATAGATTTGCTCCACGTCA 57.799 40.909 0.00 0.00 0.00 4.35
364 374 4.183865 TCAATAGATTTGCTCCACGTCAG 58.816 43.478 0.00 0.00 0.00 3.51
365 375 2.010145 TAGATTTGCTCCACGTCAGC 57.990 50.000 8.80 8.80 37.40 4.26
366 376 0.674895 AGATTTGCTCCACGTCAGCC 60.675 55.000 12.45 0.00 35.89 4.85
367 377 1.648467 GATTTGCTCCACGTCAGCCC 61.648 60.000 12.45 0.00 35.89 5.19
368 378 2.410322 ATTTGCTCCACGTCAGCCCA 62.410 55.000 12.45 1.18 35.89 5.36
369 379 2.410322 TTTGCTCCACGTCAGCCCAT 62.410 55.000 12.45 0.00 35.89 4.00
370 380 1.549243 TTGCTCCACGTCAGCCCATA 61.549 55.000 12.45 0.00 35.89 2.74
371 381 1.337384 TGCTCCACGTCAGCCCATAT 61.337 55.000 12.45 0.00 35.89 1.78
372 382 0.882042 GCTCCACGTCAGCCCATATG 60.882 60.000 4.88 0.00 0.00 1.78
373 383 0.752658 CTCCACGTCAGCCCATATGA 59.247 55.000 3.65 0.00 0.00 2.15
374 384 1.345741 CTCCACGTCAGCCCATATGAT 59.654 52.381 3.65 0.00 0.00 2.45
375 385 1.070601 TCCACGTCAGCCCATATGATG 59.929 52.381 3.65 0.28 39.19 3.07
376 386 1.070601 CCACGTCAGCCCATATGATGA 59.929 52.381 3.65 2.82 37.18 2.92
377 387 2.485302 CCACGTCAGCCCATATGATGAA 60.485 50.000 3.65 0.00 37.18 2.57
378 388 3.405831 CACGTCAGCCCATATGATGAAT 58.594 45.455 3.65 0.00 37.18 2.57
379 389 3.434641 CACGTCAGCCCATATGATGAATC 59.565 47.826 3.65 0.00 37.18 2.52
380 390 3.071457 ACGTCAGCCCATATGATGAATCA 59.929 43.478 3.65 0.00 41.70 2.57
381 391 3.434641 CGTCAGCCCATATGATGAATCAC 59.565 47.826 3.65 0.00 40.03 3.06
382 392 3.434641 GTCAGCCCATATGATGAATCACG 59.565 47.826 3.65 0.00 40.03 4.35
383 393 3.071457 TCAGCCCATATGATGAATCACGT 59.929 43.478 3.65 0.00 40.03 4.49
384 394 4.283212 TCAGCCCATATGATGAATCACGTA 59.717 41.667 3.65 0.00 40.03 3.57
385 395 4.996758 CAGCCCATATGATGAATCACGTAA 59.003 41.667 3.65 0.00 40.03 3.18
386 396 5.469760 CAGCCCATATGATGAATCACGTAAA 59.530 40.000 3.65 0.00 40.03 2.01
387 397 6.017192 CAGCCCATATGATGAATCACGTAAAA 60.017 38.462 3.65 0.00 40.03 1.52
388 398 6.545666 AGCCCATATGATGAATCACGTAAAAA 59.454 34.615 3.65 0.00 40.03 1.94
389 399 6.636850 GCCCATATGATGAATCACGTAAAAAC 59.363 38.462 3.65 0.00 40.03 2.43
390 400 7.468631 GCCCATATGATGAATCACGTAAAAACT 60.469 37.037 3.65 0.00 40.03 2.66
391 401 7.857389 CCCATATGATGAATCACGTAAAAACTG 59.143 37.037 3.65 0.00 40.03 3.16
392 402 8.611757 CCATATGATGAATCACGTAAAAACTGA 58.388 33.333 3.65 0.00 40.03 3.41
393 403 9.425893 CATATGATGAATCACGTAAAAACTGAC 57.574 33.333 0.00 0.00 40.03 3.51
394 404 6.236017 TGATGAATCACGTAAAAACTGACC 57.764 37.500 0.00 0.00 0.00 4.02
395 405 5.995282 TGATGAATCACGTAAAAACTGACCT 59.005 36.000 0.00 0.00 0.00 3.85
396 406 6.485313 TGATGAATCACGTAAAAACTGACCTT 59.515 34.615 0.00 0.00 0.00 3.50
397 407 6.055231 TGAATCACGTAAAAACTGACCTTG 57.945 37.500 0.00 0.00 0.00 3.61
398 408 5.008217 TGAATCACGTAAAAACTGACCTTGG 59.992 40.000 0.00 0.00 0.00 3.61
399 409 2.614983 TCACGTAAAAACTGACCTTGGC 59.385 45.455 0.00 0.00 0.00 4.52
400 410 2.616842 CACGTAAAAACTGACCTTGGCT 59.383 45.455 0.00 0.00 0.00 4.75
401 411 2.876550 ACGTAAAAACTGACCTTGGCTC 59.123 45.455 0.00 0.00 0.00 4.70
402 412 3.139077 CGTAAAAACTGACCTTGGCTCT 58.861 45.455 0.00 0.00 0.00 4.09
403 413 4.202284 ACGTAAAAACTGACCTTGGCTCTA 60.202 41.667 0.00 0.00 0.00 2.43
404 414 4.389077 CGTAAAAACTGACCTTGGCTCTAG 59.611 45.833 0.00 0.00 0.00 2.43
405 415 2.481289 AAACTGACCTTGGCTCTAGC 57.519 50.000 0.00 0.00 41.14 3.42
406 416 1.352083 AACTGACCTTGGCTCTAGCA 58.648 50.000 4.07 0.00 44.36 3.49
407 417 1.352083 ACTGACCTTGGCTCTAGCAA 58.648 50.000 4.07 0.00 44.36 3.91
408 418 1.912043 ACTGACCTTGGCTCTAGCAAT 59.088 47.619 4.07 0.00 44.36 3.56
409 419 3.107601 ACTGACCTTGGCTCTAGCAATA 58.892 45.455 4.07 0.00 44.36 1.90
410 420 3.118592 ACTGACCTTGGCTCTAGCAATAC 60.119 47.826 4.07 0.00 44.36 1.89
411 421 3.107601 TGACCTTGGCTCTAGCAATACT 58.892 45.455 4.07 0.00 44.36 2.12
412 422 3.133003 TGACCTTGGCTCTAGCAATACTC 59.867 47.826 4.07 0.00 44.36 2.59
413 423 3.107601 ACCTTGGCTCTAGCAATACTCA 58.892 45.455 4.07 0.00 44.36 3.41
414 424 3.133721 ACCTTGGCTCTAGCAATACTCAG 59.866 47.826 4.07 0.00 44.36 3.35
415 425 2.898729 TGGCTCTAGCAATACTCAGC 57.101 50.000 4.07 0.00 44.36 4.26
416 426 2.392662 TGGCTCTAGCAATACTCAGCT 58.607 47.619 4.07 0.00 44.36 4.24
417 427 2.363680 TGGCTCTAGCAATACTCAGCTC 59.636 50.000 4.07 0.00 44.36 4.09
418 428 2.606795 GGCTCTAGCAATACTCAGCTCG 60.607 54.545 4.07 0.00 44.36 5.03
419 429 2.606795 GCTCTAGCAATACTCAGCTCGG 60.607 54.545 0.00 0.00 42.05 4.63
420 430 1.338337 TCTAGCAATACTCAGCTCGGC 59.662 52.381 0.00 0.00 42.05 5.54
421 431 1.339610 CTAGCAATACTCAGCTCGGCT 59.660 52.381 0.00 0.00 42.05 5.52
422 432 0.539051 AGCAATACTCAGCTCGGCTT 59.461 50.000 0.00 0.00 36.40 4.35
423 433 0.654683 GCAATACTCAGCTCGGCTTG 59.345 55.000 0.00 0.00 36.40 4.01
424 434 2.009042 GCAATACTCAGCTCGGCTTGT 61.009 52.381 0.00 2.13 36.40 3.16
425 435 2.350522 CAATACTCAGCTCGGCTTGTT 58.649 47.619 0.00 0.00 36.40 2.83
426 436 2.744202 CAATACTCAGCTCGGCTTGTTT 59.256 45.455 0.00 0.00 36.40 2.83
427 437 3.887621 ATACTCAGCTCGGCTTGTTTA 57.112 42.857 0.00 0.00 36.40 2.01
428 438 2.543777 ACTCAGCTCGGCTTGTTTAA 57.456 45.000 0.00 0.00 36.40 1.52
429 439 2.846193 ACTCAGCTCGGCTTGTTTAAA 58.154 42.857 0.00 0.00 36.40 1.52
430 440 3.211045 ACTCAGCTCGGCTTGTTTAAAA 58.789 40.909 0.00 0.00 36.40 1.52
431 441 3.630312 ACTCAGCTCGGCTTGTTTAAAAA 59.370 39.130 0.00 0.00 36.40 1.94
432 442 3.959943 TCAGCTCGGCTTGTTTAAAAAC 58.040 40.909 0.00 0.00 36.40 2.43
433 443 3.378742 TCAGCTCGGCTTGTTTAAAAACA 59.621 39.130 4.19 4.19 46.35 2.83
478 1133 3.951979 AAAAGAACACAACGAGCTCAG 57.048 42.857 15.40 9.21 0.00 3.35
480 1135 1.858091 AGAACACAACGAGCTCAGTG 58.142 50.000 22.22 22.22 37.95 3.66
481 1136 1.409064 AGAACACAACGAGCTCAGTGA 59.591 47.619 27.60 0.00 35.97 3.41
484 1139 2.138320 ACACAACGAGCTCAGTGATTG 58.862 47.619 27.60 18.50 35.97 2.67
485 1140 1.462283 CACAACGAGCTCAGTGATTGG 59.538 52.381 20.33 2.78 33.99 3.16
487 1142 0.035317 AACGAGCTCAGTGATTGGCA 59.965 50.000 15.40 0.00 0.00 4.92
488 1143 0.390866 ACGAGCTCAGTGATTGGCAG 60.391 55.000 15.40 0.00 0.00 4.85
489 1144 0.108472 CGAGCTCAGTGATTGGCAGA 60.108 55.000 15.40 0.00 0.00 4.26
490 1145 1.673923 CGAGCTCAGTGATTGGCAGAA 60.674 52.381 15.40 0.00 0.00 3.02
491 1146 1.736681 GAGCTCAGTGATTGGCAGAAC 59.263 52.381 9.40 0.00 0.00 3.01
492 1147 0.807496 GCTCAGTGATTGGCAGAACC 59.193 55.000 0.00 0.00 39.84 3.62
500 1155 3.811702 TGGCAGAACCAGAGGAGG 58.188 61.111 0.00 0.00 46.36 4.30
501 1156 1.920325 TGGCAGAACCAGAGGAGGG 60.920 63.158 0.00 0.00 46.36 4.30
502 1157 1.613630 GGCAGAACCAGAGGAGGGA 60.614 63.158 0.00 0.00 38.86 4.20
503 1158 0.985490 GGCAGAACCAGAGGAGGGAT 60.985 60.000 0.00 0.00 38.86 3.85
504 1159 1.692762 GGCAGAACCAGAGGAGGGATA 60.693 57.143 0.00 0.00 38.86 2.59
505 1160 2.334023 GCAGAACCAGAGGAGGGATAT 58.666 52.381 0.00 0.00 0.00 1.63
506 1161 2.301583 GCAGAACCAGAGGAGGGATATC 59.698 54.545 0.00 0.00 0.00 1.63
507 1162 2.560542 CAGAACCAGAGGAGGGATATCG 59.439 54.545 0.00 0.00 0.00 2.92
508 1163 1.273886 GAACCAGAGGAGGGATATCGC 59.726 57.143 11.69 11.69 0.00 4.58
509 1164 0.188587 ACCAGAGGAGGGATATCGCA 59.811 55.000 20.64 0.00 0.00 5.10
510 1165 1.203237 ACCAGAGGAGGGATATCGCAT 60.203 52.381 20.64 7.14 0.00 4.73
511 1166 1.206610 CCAGAGGAGGGATATCGCATG 59.793 57.143 20.64 10.87 0.00 4.06
513 1168 0.610174 GAGGAGGGATATCGCATGCA 59.390 55.000 19.57 5.34 0.00 3.96
515 1170 1.065636 AGGAGGGATATCGCATGCATG 60.066 52.381 22.70 22.70 0.00 4.06
523 1178 2.243056 TCGCATGCATGTGAAACGT 58.757 47.368 34.56 0.00 43.60 3.99
525 1180 0.166597 CGCATGCATGTGAAACGTCT 59.833 50.000 31.87 0.00 42.39 4.18
526 1181 1.393196 CGCATGCATGTGAAACGTCTA 59.607 47.619 31.87 0.00 42.39 2.59
532 1187 4.225984 TGCATGTGAAACGTCTATTTTGC 58.774 39.130 0.00 0.00 42.39 3.68
534 1189 3.907894 TGTGAAACGTCTATTTTGCCC 57.092 42.857 0.00 0.00 42.39 5.36
535 1190 3.482436 TGTGAAACGTCTATTTTGCCCT 58.518 40.909 0.00 0.00 42.39 5.19
539 1194 3.994931 AACGTCTATTTTGCCCTAGGT 57.005 42.857 8.29 0.00 0.00 3.08
540 1195 3.994931 ACGTCTATTTTGCCCTAGGTT 57.005 42.857 8.29 0.00 0.00 3.50
542 1197 3.262405 ACGTCTATTTTGCCCTAGGTTGA 59.738 43.478 8.29 0.00 0.00 3.18
547 1202 7.066525 CGTCTATTTTGCCCTAGGTTGAATAAA 59.933 37.037 8.29 0.17 0.00 1.40
548 1203 8.188799 GTCTATTTTGCCCTAGGTTGAATAAAC 58.811 37.037 8.29 0.96 38.12 2.01
564 1219 7.928307 TGAATAAACCAGATTCTCTCAAAGG 57.072 36.000 0.00 0.00 34.88 3.11
566 1221 8.331740 TGAATAAACCAGATTCTCTCAAAGGAT 58.668 33.333 0.00 0.00 34.88 3.24
568 1223 6.830873 AAACCAGATTCTCTCAAAGGATTG 57.169 37.500 0.00 0.00 37.92 2.67
570 1225 5.885465 ACCAGATTCTCTCAAAGGATTGTT 58.115 37.500 0.00 0.00 37.79 2.83
571 1226 5.709164 ACCAGATTCTCTCAAAGGATTGTTG 59.291 40.000 0.00 0.00 37.79 3.33
572 1227 5.942236 CCAGATTCTCTCAAAGGATTGTTGA 59.058 40.000 0.00 0.00 37.79 3.18
573 1228 6.602406 CCAGATTCTCTCAAAGGATTGTTGAT 59.398 38.462 0.00 0.00 37.79 2.57
574 1229 7.415318 CCAGATTCTCTCAAAGGATTGTTGATG 60.415 40.741 0.00 0.00 37.79 3.07
575 1230 5.633830 TTCTCTCAAAGGATTGTTGATGC 57.366 39.130 0.00 0.00 37.79 3.91
576 1231 4.654915 TCTCTCAAAGGATTGTTGATGCA 58.345 39.130 0.00 0.00 37.79 3.96
577 1232 5.258841 TCTCTCAAAGGATTGTTGATGCAT 58.741 37.500 0.00 0.00 37.79 3.96
578 1233 5.713389 TCTCTCAAAGGATTGTTGATGCATT 59.287 36.000 0.00 0.00 37.79 3.56
579 1234 5.957798 TCTCAAAGGATTGTTGATGCATTC 58.042 37.500 0.00 0.00 37.79 2.67
580 1235 5.477637 TCTCAAAGGATTGTTGATGCATTCA 59.522 36.000 0.00 0.00 37.79 2.57
581 1236 6.153851 TCTCAAAGGATTGTTGATGCATTCAT 59.846 34.615 0.00 0.00 37.79 2.57
582 1237 7.339976 TCTCAAAGGATTGTTGATGCATTCATA 59.660 33.333 0.00 0.00 37.79 2.15
583 1238 8.014070 TCAAAGGATTGTTGATGCATTCATAT 57.986 30.769 0.00 0.00 37.79 1.78
584 1239 7.923878 TCAAAGGATTGTTGATGCATTCATATG 59.076 33.333 0.00 0.00 37.79 1.78
598 1253 6.615264 CATTCATATGCTGACAGCTTAGTT 57.385 37.500 26.94 9.42 42.97 2.24
599 1254 7.024340 CATTCATATGCTGACAGCTTAGTTT 57.976 36.000 26.94 8.75 42.97 2.66
600 1255 6.668541 TTCATATGCTGACAGCTTAGTTTC 57.331 37.500 26.94 0.00 42.97 2.78
601 1256 5.118990 TCATATGCTGACAGCTTAGTTTCC 58.881 41.667 26.94 0.00 42.97 3.13
603 1258 3.423539 TGCTGACAGCTTAGTTTCCAT 57.576 42.857 26.94 0.00 42.97 3.41
606 1261 3.126000 GCTGACAGCTTAGTTTCCATGAC 59.874 47.826 20.41 0.00 38.45 3.06
607 1262 4.573900 CTGACAGCTTAGTTTCCATGACT 58.426 43.478 0.00 0.00 0.00 3.41
608 1263 5.724328 CTGACAGCTTAGTTTCCATGACTA 58.276 41.667 0.00 0.00 0.00 2.59
609 1264 6.299805 TGACAGCTTAGTTTCCATGACTAT 57.700 37.500 0.00 0.00 30.30 2.12
610 1265 6.711277 TGACAGCTTAGTTTCCATGACTATT 58.289 36.000 0.00 0.00 30.30 1.73
611 1266 7.168219 TGACAGCTTAGTTTCCATGACTATTT 58.832 34.615 0.00 0.00 30.30 1.40
612 1267 7.665559 TGACAGCTTAGTTTCCATGACTATTTT 59.334 33.333 0.00 0.00 30.30 1.82
613 1268 8.045176 ACAGCTTAGTTTCCATGACTATTTTC 57.955 34.615 0.00 0.00 30.30 2.29
615 1270 8.680903 CAGCTTAGTTTCCATGACTATTTTCAT 58.319 33.333 0.00 0.00 36.62 2.57
616 1271 9.905713 AGCTTAGTTTCCATGACTATTTTCATA 57.094 29.630 0.00 0.00 34.29 2.15
624 1279 9.547753 TTCCATGACTATTTTCATAAGTAGAGC 57.452 33.333 0.00 0.00 34.29 4.09
625 1280 8.704668 TCCATGACTATTTTCATAAGTAGAGCA 58.295 33.333 0.00 0.00 34.29 4.26
626 1281 9.499479 CCATGACTATTTTCATAAGTAGAGCAT 57.501 33.333 0.00 0.00 34.29 3.79
643 1298 9.456147 AGTAGAGCATGTATATACAAGTCTAGG 57.544 37.037 19.11 5.14 39.99 3.02
644 1299 9.451002 GTAGAGCATGTATATACAAGTCTAGGA 57.549 37.037 19.11 4.97 39.99 2.94
645 1300 8.343168 AGAGCATGTATATACAAGTCTAGGAC 57.657 38.462 19.11 1.36 39.99 3.85
646 1301 8.167392 AGAGCATGTATATACAAGTCTAGGACT 58.833 37.037 19.11 5.88 45.64 3.85
659 1314 6.739331 AGTCTAGGACTTAAATCCAGATGG 57.261 41.667 5.63 0.00 40.28 3.51
660 1315 6.206042 AGTCTAGGACTTAAATCCAGATGGT 58.794 40.000 5.63 0.00 40.28 3.55
661 1316 6.674419 AGTCTAGGACTTAAATCCAGATGGTT 59.326 38.462 5.63 0.00 40.28 3.67
662 1317 7.844779 AGTCTAGGACTTAAATCCAGATGGTTA 59.155 37.037 5.63 0.00 40.28 2.85
664 1319 6.253946 AGGACTTAAATCCAGATGGTTAGG 57.746 41.667 5.63 0.00 41.73 2.69
665 1320 5.970640 AGGACTTAAATCCAGATGGTTAGGA 59.029 40.000 5.63 0.00 41.73 2.94
681 1913 5.251932 TGGTTAGGACCTCCAAATACAATGA 59.748 40.000 0.00 0.00 46.66 2.57
710 1942 6.387041 ACAAGTGGTAGTTTTTCCTTAAGC 57.613 37.500 0.00 0.00 0.00 3.09
718 1950 6.655425 GGTAGTTTTTCCTTAAGCAGATGACT 59.345 38.462 0.00 0.00 0.00 3.41
720 1952 9.216117 GTAGTTTTTCCTTAAGCAGATGACTTA 57.784 33.333 0.00 0.00 0.00 2.24
722 1954 8.157476 AGTTTTTCCTTAAGCAGATGACTTAGA 58.843 33.333 0.00 0.00 31.56 2.10
723 1955 8.951243 GTTTTTCCTTAAGCAGATGACTTAGAT 58.049 33.333 0.00 0.00 31.56 1.98
724 1956 9.520515 TTTTTCCTTAAGCAGATGACTTAGATT 57.479 29.630 0.00 0.00 31.56 2.40
727 1959 7.851228 TCCTTAAGCAGATGACTTAGATTCAA 58.149 34.615 0.00 0.00 31.56 2.69
729 1961 8.557864 CCTTAAGCAGATGACTTAGATTCAATG 58.442 37.037 0.00 0.00 31.56 2.82
730 1962 9.322773 CTTAAGCAGATGACTTAGATTCAATGA 57.677 33.333 0.00 0.00 31.56 2.57
732 1964 8.749026 AAGCAGATGACTTAGATTCAATGATT 57.251 30.769 0.00 0.00 0.00 2.57
735 1967 9.049523 GCAGATGACTTAGATTCAATGATTGTA 57.950 33.333 4.93 0.00 0.00 2.41
744 2401 9.958180 TTAGATTCAATGATTGTAACAGAGGAA 57.042 29.630 4.93 0.00 0.00 3.36
766 2423 7.843760 AGGAATGGTGGTAATTGAATCCAAATA 59.156 33.333 0.00 0.00 35.67 1.40
787 2453 8.591312 CAAATAAAAATTTCAACACGTGTCTGT 58.409 29.630 23.61 3.04 0.00 3.41
802 2469 2.228103 TGTCTGTCGAACGAGCAGTAAT 59.772 45.455 18.16 0.00 0.00 1.89
805 2472 2.592194 TGTCGAACGAGCAGTAATCAC 58.408 47.619 0.00 0.00 0.00 3.06
941 2609 0.472734 ATCCATCCCTTCCTCCTCCG 60.473 60.000 0.00 0.00 0.00 4.63
1183 2851 4.738998 TTCCCCACAGGCATGCCG 62.739 66.667 30.50 25.58 41.95 5.69
1303 2975 5.599999 TCTAGAGCTTCAGTGAATTACCC 57.400 43.478 5.91 0.00 0.00 3.69
1308 2989 2.290960 GCTTCAGTGAATTACCCACCCT 60.291 50.000 5.91 0.00 35.23 4.34
1331 3012 6.461110 TTCTTACTGGATTTAGGAGTACCG 57.539 41.667 0.00 0.00 41.83 4.02
1345 3026 3.647590 GGAGTACCGGGTTATGGGAATTA 59.352 47.826 4.31 0.00 0.00 1.40
1372 3055 4.155826 TCTTATGATTGCTGTTTGAACGGG 59.844 41.667 4.97 0.00 35.81 5.28
1387 3070 0.037160 ACGGGGTTAATGCTCGGTTT 59.963 50.000 0.00 0.00 0.00 3.27
1388 3071 0.450184 CGGGGTTAATGCTCGGTTTG 59.550 55.000 0.00 0.00 0.00 2.93
1389 3072 1.828979 GGGGTTAATGCTCGGTTTGA 58.171 50.000 0.00 0.00 0.00 2.69
1390 3073 2.375146 GGGGTTAATGCTCGGTTTGAT 58.625 47.619 0.00 0.00 0.00 2.57
1391 3074 2.099098 GGGGTTAATGCTCGGTTTGATG 59.901 50.000 0.00 0.00 0.00 3.07
1392 3075 2.752903 GGGTTAATGCTCGGTTTGATGT 59.247 45.455 0.00 0.00 0.00 3.06
1415 3251 2.037381 TGTAACGTATTGTGCTGGTGGA 59.963 45.455 0.00 0.00 0.00 4.02
1470 3517 6.978674 TGAAGGTACCTTTATGATCGATCT 57.021 37.500 27.72 13.51 36.26 2.75
1506 3553 9.519191 TGGAAAGATTATCTGAATTGTGAAAGA 57.481 29.630 0.00 0.00 0.00 2.52
1587 3638 5.489997 ACAGATGCCATATCTCCATTGGATA 59.510 40.000 5.70 0.00 31.94 2.59
1632 3683 5.505159 GGTCTTTTCCTCGATCAAACGTTTT 60.505 40.000 11.66 0.00 34.70 2.43
1633 3684 5.620011 GTCTTTTCCTCGATCAAACGTTTTC 59.380 40.000 11.66 6.73 34.70 2.29
1645 3696 4.761227 TCAAACGTTTTCCCCTGGTTATAC 59.239 41.667 11.66 0.00 0.00 1.47
1657 3708 8.258850 TCCCCTGGTTATACTAGTAAATTGAG 57.741 38.462 6.70 1.21 0.00 3.02
1684 3735 5.299531 CCCTTAACCTTAGCTTCTTTATGCC 59.700 44.000 0.00 0.00 0.00 4.40
1703 3754 3.488467 GAGCCTAGCCATGCCCCAG 62.488 68.421 0.00 0.00 0.00 4.45
1727 3778 9.973450 CAGCTAGTTCTTGCTATCTTTATCTTA 57.027 33.333 8.23 0.00 37.81 2.10
1792 4006 7.011499 ACTTGGACACAGGTGTTATAATACA 57.989 36.000 13.55 0.00 45.05 2.29
1867 4113 5.600749 ACTCCCTCCGTCCCATAATATAAT 58.399 41.667 0.00 0.00 0.00 1.28
2053 4441 5.437263 TCGCGTTTTTAGTGAAGTTTGATC 58.563 37.500 5.77 0.00 0.00 2.92
2136 4539 4.756642 TCTGACTGGTTTAAACTGCAGATG 59.243 41.667 23.35 15.02 0.00 2.90
2138 4541 3.821033 GACTGGTTTAAACTGCAGATGGT 59.179 43.478 23.35 4.57 0.00 3.55
2139 4542 4.980573 ACTGGTTTAAACTGCAGATGGTA 58.019 39.130 23.35 3.53 0.00 3.25
2163 4566 9.433153 GTATATGGGACCTAATTTTGTACTAGC 57.567 37.037 0.00 0.00 0.00 3.42
2233 4638 5.957771 TCTTGCCATAGTTCCTTATGTCT 57.042 39.130 0.00 0.00 30.65 3.41
2369 4814 3.785486 AGGAAAACAGCAAAGTTGAAGC 58.215 40.909 0.00 0.00 0.00 3.86
2407 4852 7.889589 TCGTGCTCATAAATATGTAAGATGG 57.110 36.000 0.68 0.00 35.26 3.51
2442 4970 5.418524 TCTGCTGCCAAATTTATTAAGCTGA 59.581 36.000 14.39 14.39 35.61 4.26
2474 5002 6.509418 TTTAATTCAGCAGCCGAGTTAAAT 57.491 33.333 12.67 0.00 32.74 1.40
2557 5086 7.183580 GTGTATCTAATGCACCATTCTCTTC 57.816 40.000 0.00 0.00 39.56 2.87
2558 5087 6.763135 GTGTATCTAATGCACCATTCTCTTCA 59.237 38.462 0.00 0.00 39.56 3.02
2671 5281 5.053811 TGTATAATACCATGCACTTCACCG 58.946 41.667 0.00 0.00 0.00 4.94
2798 5409 2.955660 ACAAGGTGTGTTTGGTATGGTG 59.044 45.455 0.00 0.00 37.01 4.17
2815 5426 2.116238 GGTGTACCTATTCCTCTGGCA 58.884 52.381 0.00 0.00 0.00 4.92
2904 5515 4.119862 GCGTTCTCAAGGTGCATAATCTA 58.880 43.478 0.00 0.00 0.00 1.98
2914 5525 2.797156 GTGCATAATCTACAGCTCCACG 59.203 50.000 0.00 0.00 0.00 4.94
2918 5529 0.456221 AATCTACAGCTCCACGACCG 59.544 55.000 0.00 0.00 0.00 4.79
2992 5603 2.282040 GCTCAAGTGCACTGGGCT 60.282 61.111 22.49 0.38 45.15 5.19
3005 5617 2.237143 CACTGGGCTCATAGTTCCTCAA 59.763 50.000 0.00 0.00 0.00 3.02
3113 5728 1.952296 CTGTTGAACTTGCTGAGGCTT 59.048 47.619 0.00 0.00 39.59 4.35
3198 5814 6.799827 ACTGGATGCTCTCTAATCCTATAGT 58.200 40.000 0.00 0.00 42.51 2.12
3234 5854 1.340017 ACACCATGTGCCCATACACTC 60.340 52.381 0.00 0.00 41.30 3.51
3253 5874 4.026475 CACTCGTCTTTGTCTTCAACACTC 60.026 45.833 0.00 0.00 37.70 3.51
3399 6020 5.725362 AGTAGTGAGGTTATTCTTGACTGC 58.275 41.667 0.00 0.00 0.00 4.40
3413 6034 0.321653 GACTGCCGGGATTGAACTGT 60.322 55.000 2.18 0.00 0.00 3.55
3426 6047 7.521423 CGGGATTGAACTGTTGAGTATTCAAAA 60.521 37.037 1.77 0.00 44.49 2.44
3486 6107 6.384258 TTGTGTTATTGACTAGCAAAAGCA 57.616 33.333 4.14 2.00 40.48 3.91
3516 6137 3.074538 ACCTGGAATTATGGGATAGGCAC 59.925 47.826 0.00 0.00 0.00 5.01
3615 6236 4.319405 CGGCATTTTGTCAAAATTTCCACC 60.319 41.667 24.60 17.95 38.97 4.61
3893 6530 6.712547 GGATTTTCTGTATATTCCTGGACCTG 59.287 42.308 0.00 0.00 0.00 4.00
3896 6533 3.643320 TCTGTATATTCCTGGACCTGCTG 59.357 47.826 0.00 0.00 0.00 4.41
3923 6692 9.581289 TTTCCAAATCCTTTATAACTGTCTTGA 57.419 29.630 0.00 0.00 0.00 3.02
4046 6815 5.687730 GCTTAAGGTGAGCTTTCTTTCAAAC 59.312 40.000 0.90 0.00 37.18 2.93
4131 6909 6.998074 TCCATTTTCGCTCCTGTCAATATAAT 59.002 34.615 0.00 0.00 0.00 1.28
4176 6954 5.705441 TGCAAATTACTCCCTCTGTAAACTG 59.295 40.000 0.00 0.00 34.20 3.16
4216 7191 1.926511 GCCCTTGTCGCCATGTCTTG 61.927 60.000 0.00 0.00 0.00 3.02
4259 7234 5.263599 TCATTGCAGTTCCATAACCTTCAT 58.736 37.500 0.00 0.00 36.15 2.57
4292 7267 3.137360 ACAGTTGGAAGAGCTCCTTTCTT 59.863 43.478 10.93 0.00 45.64 2.52
4402 7379 5.299279 TGTTGGAACCTCATTCTTGAAGTTC 59.701 40.000 8.33 8.33 46.09 3.01
4472 7939 2.708051 ACAGCACCTCAGATGACATTG 58.292 47.619 0.00 0.00 0.00 2.82
4475 7942 3.945921 CAGCACCTCAGATGACATTGATT 59.054 43.478 0.00 0.00 0.00 2.57
4476 7943 4.398358 CAGCACCTCAGATGACATTGATTT 59.602 41.667 0.00 0.00 0.00 2.17
4478 7945 6.262496 CAGCACCTCAGATGACATTGATTTAT 59.738 38.462 0.00 0.00 0.00 1.40
4479 7946 6.485984 AGCACCTCAGATGACATTGATTTATC 59.514 38.462 0.00 0.00 0.00 1.75
4480 7947 6.565435 GCACCTCAGATGACATTGATTTATCG 60.565 42.308 0.00 0.00 0.00 2.92
4481 7948 6.703165 CACCTCAGATGACATTGATTTATCGA 59.297 38.462 0.00 0.00 0.00 3.59
4482 7949 6.927936 ACCTCAGATGACATTGATTTATCGAG 59.072 38.462 0.00 0.00 0.00 4.04
4483 7950 7.150640 CCTCAGATGACATTGATTTATCGAGA 58.849 38.462 0.00 0.00 0.00 4.04
4484 7951 7.654923 CCTCAGATGACATTGATTTATCGAGAA 59.345 37.037 0.00 0.00 0.00 2.87
4494 7961 4.092821 TGATTTATCGAGAAAAGTGGCGTG 59.907 41.667 9.57 0.00 0.00 5.34
4507 7982 1.877443 GTGGCGTGTTTTGGTGATACT 59.123 47.619 0.00 0.00 0.00 2.12
4510 7985 3.749088 TGGCGTGTTTTGGTGATACTAAG 59.251 43.478 0.00 0.00 0.00 2.18
4512 7987 3.723835 GCGTGTTTTGGTGATACTAAGCG 60.724 47.826 0.00 0.00 0.00 4.68
4528 8003 1.226295 GCGTAGATTTTGCACGGCC 60.226 57.895 0.00 0.00 36.23 6.13
4547 8031 1.291184 CCGTGTGATGCGTGACATGT 61.291 55.000 15.33 0.00 39.84 3.21
4548 8032 0.512518 CGTGTGATGCGTGACATGTT 59.487 50.000 9.34 0.00 39.84 2.71
4549 8033 1.069973 CGTGTGATGCGTGACATGTTT 60.070 47.619 9.34 0.00 39.84 2.83
4561 8045 4.394729 GTGACATGTTTTAGTCCCTGGAA 58.605 43.478 0.00 0.00 33.89 3.53
4588 8072 2.253452 CACAACGCCAGCAGAAGC 59.747 61.111 0.00 0.00 42.56 3.86
4605 8112 1.123077 AGCTGCATCCTCCATCGTTA 58.877 50.000 1.02 0.00 0.00 3.18
4607 8114 2.092968 AGCTGCATCCTCCATCGTTAAA 60.093 45.455 1.02 0.00 0.00 1.52
4608 8115 2.289002 GCTGCATCCTCCATCGTTAAAG 59.711 50.000 0.00 0.00 0.00 1.85
4609 8116 3.535561 CTGCATCCTCCATCGTTAAAGT 58.464 45.455 0.00 0.00 0.00 2.66
4610 8117 4.693283 CTGCATCCTCCATCGTTAAAGTA 58.307 43.478 0.00 0.00 0.00 2.24
4611 8118 5.290493 TGCATCCTCCATCGTTAAAGTAT 57.710 39.130 0.00 0.00 0.00 2.12
4612 8119 6.413783 TGCATCCTCCATCGTTAAAGTATA 57.586 37.500 0.00 0.00 0.00 1.47
4613 8120 7.004555 TGCATCCTCCATCGTTAAAGTATAT 57.995 36.000 0.00 0.00 0.00 0.86
4614 8121 8.129496 TGCATCCTCCATCGTTAAAGTATATA 57.871 34.615 0.00 0.00 0.00 0.86
4615 8122 8.033038 TGCATCCTCCATCGTTAAAGTATATAC 58.967 37.037 4.60 4.60 0.00 1.47
4616 8123 8.251721 GCATCCTCCATCGTTAAAGTATATACT 58.748 37.037 9.71 9.71 38.39 2.12
4617 8124 9.790389 CATCCTCCATCGTTAAAGTATATACTC 57.210 37.037 15.72 2.86 34.99 2.59
4618 8125 8.345724 TCCTCCATCGTTAAAGTATATACTCC 57.654 38.462 15.72 4.26 34.99 3.85
4619 8126 7.120285 TCCTCCATCGTTAAAGTATATACTCCG 59.880 40.741 15.72 14.43 34.99 4.63
4620 8127 6.615088 TCCATCGTTAAAGTATATACTCCGC 58.385 40.000 15.72 6.31 34.99 5.54
4621 8128 6.207221 TCCATCGTTAAAGTATATACTCCGCA 59.793 38.462 15.72 7.12 34.99 5.69
4622 8129 7.033791 CCATCGTTAAAGTATATACTCCGCAT 58.966 38.462 15.72 0.00 34.99 4.73
4623 8130 7.220300 CCATCGTTAAAGTATATACTCCGCATC 59.780 40.741 15.72 4.76 34.99 3.91
4624 8131 7.205737 TCGTTAAAGTATATACTCCGCATCA 57.794 36.000 15.72 0.00 34.99 3.07
4625 8132 7.650890 TCGTTAAAGTATATACTCCGCATCAA 58.349 34.615 15.72 1.01 34.99 2.57
4626 8133 8.301720 TCGTTAAAGTATATACTCCGCATCAAT 58.698 33.333 15.72 0.00 34.99 2.57
4627 8134 8.922676 CGTTAAAGTATATACTCCGCATCAATT 58.077 33.333 15.72 5.98 34.99 2.32
4629 8136 7.672983 AAAGTATATACTCCGCATCAATTGG 57.327 36.000 15.72 0.00 34.99 3.16
4630 8137 5.734720 AGTATATACTCCGCATCAATTGGG 58.265 41.667 9.71 0.00 37.99 4.12
4631 8138 4.640771 ATATACTCCGCATCAATTGGGT 57.359 40.909 5.42 0.00 36.57 4.51
4632 8139 5.755409 ATATACTCCGCATCAATTGGGTA 57.245 39.130 5.42 0.00 36.57 3.69
4633 8140 4.640771 ATACTCCGCATCAATTGGGTAT 57.359 40.909 5.42 0.00 36.57 2.73
4634 8141 2.575532 ACTCCGCATCAATTGGGTATG 58.424 47.619 5.42 3.47 36.57 2.39
4635 8142 2.172505 ACTCCGCATCAATTGGGTATGA 59.827 45.455 5.42 0.00 36.57 2.15
4636 8143 2.810274 CTCCGCATCAATTGGGTATGAG 59.190 50.000 5.42 4.16 36.57 2.90
4637 8144 2.172505 TCCGCATCAATTGGGTATGAGT 59.827 45.455 5.42 0.00 36.57 3.41
4638 8145 3.389656 TCCGCATCAATTGGGTATGAGTA 59.610 43.478 5.42 0.00 36.57 2.59
4639 8146 3.498397 CCGCATCAATTGGGTATGAGTAC 59.502 47.826 5.42 0.00 36.57 2.73
4665 8172 1.112916 TCTTGTCTCACCGCTCCACA 61.113 55.000 0.00 0.00 0.00 4.17
4672 8179 2.048023 CACCGCTCCACATGCCATT 61.048 57.895 0.00 0.00 0.00 3.16
4821 8329 2.490509 CACCTCCAGTATCACACGTGTA 59.509 50.000 22.90 10.48 0.00 2.90
4848 8360 1.283905 AGCCTACCCACGCCTTAAAAT 59.716 47.619 0.00 0.00 0.00 1.82
4849 8361 2.097036 GCCTACCCACGCCTTAAAATT 58.903 47.619 0.00 0.00 0.00 1.82
4862 8374 0.648441 TAAAATTAGCTGACGCCGCG 59.352 50.000 12.14 12.14 36.60 6.46
4863 8375 1.296056 AAAATTAGCTGACGCCGCGT 61.296 50.000 20.31 20.31 45.10 6.01
4886 8398 1.075600 CCCCTCCTCTCCTCTCCAC 60.076 68.421 0.00 0.00 0.00 4.02
4889 8401 0.264359 CCTCCTCTCCTCTCCACCAT 59.736 60.000 0.00 0.00 0.00 3.55
4890 8402 1.501170 CCTCCTCTCCTCTCCACCATA 59.499 57.143 0.00 0.00 0.00 2.74
4892 8404 2.176798 CTCCTCTCCTCTCCACCATACT 59.823 54.545 0.00 0.00 0.00 2.12
4894 8406 2.176798 CCTCTCCTCTCCACCATACTCT 59.823 54.545 0.00 0.00 0.00 3.24
4895 8407 3.396276 CCTCTCCTCTCCACCATACTCTA 59.604 52.174 0.00 0.00 0.00 2.43
4897 8409 3.153919 CTCCTCTCCACCATACTCTAGC 58.846 54.545 0.00 0.00 0.00 3.42
4900 8412 1.133761 TCTCCACCATACTCTAGCGCT 60.134 52.381 17.26 17.26 0.00 5.92
4901 8413 1.683917 CTCCACCATACTCTAGCGCTT 59.316 52.381 18.68 0.00 0.00 4.68
4902 8414 2.101582 CTCCACCATACTCTAGCGCTTT 59.898 50.000 18.68 0.00 0.00 3.51
4904 8416 2.474816 CACCATACTCTAGCGCTTTCC 58.525 52.381 18.68 0.00 0.00 3.13
4905 8417 1.413077 ACCATACTCTAGCGCTTTCCC 59.587 52.381 18.68 0.00 0.00 3.97
4906 8418 1.603172 CCATACTCTAGCGCTTTCCCG 60.603 57.143 18.68 2.51 0.00 5.14
4907 8419 1.337071 CATACTCTAGCGCTTTCCCGA 59.663 52.381 18.68 4.02 0.00 5.14
4918 8445 2.727777 GCTTTCCCGAACACAAAACTC 58.272 47.619 0.00 0.00 0.00 3.01
4925 8456 1.466855 GAACACAAAACTCGCACAGC 58.533 50.000 0.00 0.00 0.00 4.40
4941 8472 3.654020 GCATCGAAGATGGCGGCC 61.654 66.667 13.32 13.32 45.12 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 0.736325 CGAAGACGAAGGGTTGCGAT 60.736 55.000 0.00 0.00 42.66 4.58
15 16 0.389426 TAGCGAAGACGAAGGGTTGC 60.389 55.000 0.00 0.00 42.66 4.17
19 20 1.356938 GGTTTAGCGAAGACGAAGGG 58.643 55.000 0.00 0.00 42.66 3.95
22 23 0.597568 TCCGGTTTAGCGAAGACGAA 59.402 50.000 0.00 0.00 42.66 3.85
24 25 1.400990 CGTCCGGTTTAGCGAAGACG 61.401 60.000 14.86 14.86 40.76 4.18
25 26 0.387750 ACGTCCGGTTTAGCGAAGAC 60.388 55.000 0.00 2.29 0.00 3.01
26 27 0.109597 GACGTCCGGTTTAGCGAAGA 60.110 55.000 3.51 0.00 0.00 2.87
28 29 1.442520 CGACGTCCGGTTTAGCGAA 60.443 57.895 10.58 0.00 33.91 4.70
29 30 2.176546 CGACGTCCGGTTTAGCGA 59.823 61.111 10.58 0.00 33.91 4.93
30 31 2.126734 ACGACGTCCGGTTTAGCG 60.127 61.111 10.58 3.05 43.93 4.26
31 32 2.090524 CCACGACGTCCGGTTTAGC 61.091 63.158 10.58 0.00 43.93 3.09
32 33 1.444895 CCCACGACGTCCGGTTTAG 60.445 63.158 10.58 0.00 43.93 1.85
33 34 2.199652 ACCCACGACGTCCGGTTTA 61.200 57.895 10.58 0.00 43.93 2.01
34 35 3.539791 ACCCACGACGTCCGGTTT 61.540 61.111 10.58 0.00 43.93 3.27
51 53 4.417183 AGGTATCTCTGGTCTCTCCATACA 59.583 45.833 0.00 0.00 46.12 2.29
91 93 2.203337 GACAAGGTGGTGGCAGCA 60.203 61.111 16.56 16.56 0.00 4.41
94 96 0.908910 ATATCGACAAGGTGGTGGCA 59.091 50.000 0.00 0.00 0.00 4.92
112 114 4.100279 AGGTTTTTGTTTCTCCGGAGAT 57.900 40.909 33.97 12.95 37.29 2.75
115 117 6.999871 ACTTATTAGGTTTTTGTTTCTCCGGA 59.000 34.615 2.93 2.93 0.00 5.14
140 142 6.323739 GGCCCATCCTTCTCATTTTGTTATTA 59.676 38.462 0.00 0.00 0.00 0.98
194 196 0.036577 CACTCCTCTTGCCTGTCCAG 60.037 60.000 0.00 0.00 0.00 3.86
195 197 1.483595 CCACTCCTCTTGCCTGTCCA 61.484 60.000 0.00 0.00 0.00 4.02
203 206 1.608717 CCTCGGTCCCACTCCTCTTG 61.609 65.000 0.00 0.00 0.00 3.02
224 227 3.825160 AAGCTTTCCTGCACGCCGA 62.825 57.895 0.00 0.00 34.99 5.54
225 228 2.908073 AAAGCTTTCCTGCACGCCG 61.908 57.895 5.69 0.00 34.99 6.46
226 229 1.372128 CAAAGCTTTCCTGCACGCC 60.372 57.895 9.23 0.00 34.99 5.68
227 230 0.661483 GTCAAAGCTTTCCTGCACGC 60.661 55.000 9.23 0.00 34.99 5.34
228 231 0.384725 CGTCAAAGCTTTCCTGCACG 60.385 55.000 9.23 8.93 34.99 5.34
229 232 0.040067 CCGTCAAAGCTTTCCTGCAC 60.040 55.000 9.23 0.62 34.99 4.57
230 233 1.795170 GCCGTCAAAGCTTTCCTGCA 61.795 55.000 9.23 0.00 34.99 4.41
231 234 1.081175 GCCGTCAAAGCTTTCCTGC 60.081 57.895 9.23 7.33 0.00 4.85
232 235 1.734465 CTAGCCGTCAAAGCTTTCCTG 59.266 52.381 9.23 0.00 41.83 3.86
233 236 1.339151 CCTAGCCGTCAAAGCTTTCCT 60.339 52.381 9.23 3.71 41.83 3.36
234 237 1.087501 CCTAGCCGTCAAAGCTTTCC 58.912 55.000 9.23 1.88 41.83 3.13
236 239 0.400594 ACCCTAGCCGTCAAAGCTTT 59.599 50.000 5.69 5.69 41.83 3.51
239 242 1.305930 CCAACCCTAGCCGTCAAAGC 61.306 60.000 0.00 0.00 0.00 3.51
240 243 0.676782 CCCAACCCTAGCCGTCAAAG 60.677 60.000 0.00 0.00 0.00 2.77
241 244 1.128809 TCCCAACCCTAGCCGTCAAA 61.129 55.000 0.00 0.00 0.00 2.69
245 255 2.599757 GGTTCCCAACCCTAGCCGT 61.600 63.158 0.00 0.00 46.12 5.68
255 265 1.145945 TGTGGTGCATAAGGTTCCCAA 59.854 47.619 0.00 0.00 0.00 4.12
263 273 3.181482 TGGTTTTGTGTGTGGTGCATAAG 60.181 43.478 0.00 0.00 0.00 1.73
281 291 4.027782 AGGGGAGGAGAGATTTATGGTT 57.972 45.455 0.00 0.00 0.00 3.67
282 292 3.718956 CAAGGGGAGGAGAGATTTATGGT 59.281 47.826 0.00 0.00 0.00 3.55
285 295 6.855375 ATTTCAAGGGGAGGAGAGATTTAT 57.145 37.500 0.00 0.00 0.00 1.40
286 296 6.658555 AATTTCAAGGGGAGGAGAGATTTA 57.341 37.500 0.00 0.00 0.00 1.40
290 300 4.227527 GGTAAATTTCAAGGGGAGGAGAGA 59.772 45.833 0.00 0.00 0.00 3.10
291 301 4.527944 GGTAAATTTCAAGGGGAGGAGAG 58.472 47.826 0.00 0.00 0.00 3.20
292 302 3.054655 CGGTAAATTTCAAGGGGAGGAGA 60.055 47.826 0.00 0.00 0.00 3.71
293 303 3.279434 CGGTAAATTTCAAGGGGAGGAG 58.721 50.000 0.00 0.00 0.00 3.69
294 304 2.645797 ACGGTAAATTTCAAGGGGAGGA 59.354 45.455 0.00 0.00 0.00 3.71
295 305 3.014623 GACGGTAAATTTCAAGGGGAGG 58.985 50.000 0.00 0.00 0.00 4.30
296 306 2.676342 CGACGGTAAATTTCAAGGGGAG 59.324 50.000 0.00 0.00 0.00 4.30
297 307 2.038820 ACGACGGTAAATTTCAAGGGGA 59.961 45.455 0.00 0.00 0.00 4.81
298 308 2.160813 CACGACGGTAAATTTCAAGGGG 59.839 50.000 0.00 0.00 0.00 4.79
299 309 2.160813 CCACGACGGTAAATTTCAAGGG 59.839 50.000 0.00 0.00 0.00 3.95
300 310 3.465122 CCACGACGGTAAATTTCAAGG 57.535 47.619 0.00 0.00 0.00 3.61
320 330 3.825143 TTAAGATTAGCGGGTGGGTAC 57.175 47.619 0.00 0.00 0.00 3.34
321 331 4.409574 TGATTTAAGATTAGCGGGTGGGTA 59.590 41.667 0.00 0.00 0.00 3.69
322 332 3.201266 TGATTTAAGATTAGCGGGTGGGT 59.799 43.478 0.00 0.00 0.00 4.51
323 333 3.815809 TGATTTAAGATTAGCGGGTGGG 58.184 45.455 0.00 0.00 0.00 4.61
324 334 6.934645 TCTATTGATTTAAGATTAGCGGGTGG 59.065 38.462 0.00 0.00 0.00 4.61
325 335 7.962964 TCTATTGATTTAAGATTAGCGGGTG 57.037 36.000 0.00 0.00 0.00 4.61
340 350 5.185454 TGACGTGGAGCAAATCTATTGATT 58.815 37.500 0.00 0.00 44.08 2.57
341 351 4.769688 TGACGTGGAGCAAATCTATTGAT 58.230 39.130 0.00 0.00 33.70 2.57
342 352 4.183865 CTGACGTGGAGCAAATCTATTGA 58.816 43.478 0.00 0.00 0.00 2.57
343 353 3.242543 GCTGACGTGGAGCAAATCTATTG 60.243 47.826 10.60 0.00 36.40 1.90
344 354 2.939103 GCTGACGTGGAGCAAATCTATT 59.061 45.455 10.60 0.00 36.40 1.73
345 355 2.555199 GCTGACGTGGAGCAAATCTAT 58.445 47.619 10.60 0.00 36.40 1.98
346 356 1.405526 GGCTGACGTGGAGCAAATCTA 60.406 52.381 16.00 0.00 38.27 1.98
347 357 0.674895 GGCTGACGTGGAGCAAATCT 60.675 55.000 16.00 0.00 38.27 2.40
348 358 1.648467 GGGCTGACGTGGAGCAAATC 61.648 60.000 16.00 1.33 38.27 2.17
349 359 1.675641 GGGCTGACGTGGAGCAAAT 60.676 57.895 16.00 0.00 38.27 2.32
350 360 2.281484 GGGCTGACGTGGAGCAAA 60.281 61.111 16.00 0.00 38.27 3.68
351 361 1.549243 TATGGGCTGACGTGGAGCAA 61.549 55.000 16.00 6.03 38.27 3.91
352 362 1.337384 ATATGGGCTGACGTGGAGCA 61.337 55.000 16.00 0.00 38.27 4.26
353 363 0.882042 CATATGGGCTGACGTGGAGC 60.882 60.000 7.50 7.50 35.57 4.70
354 364 0.752658 TCATATGGGCTGACGTGGAG 59.247 55.000 2.13 0.00 0.00 3.86
355 365 1.070601 CATCATATGGGCTGACGTGGA 59.929 52.381 2.13 0.00 0.00 4.02
356 366 1.070601 TCATCATATGGGCTGACGTGG 59.929 52.381 2.13 0.00 0.00 4.94
357 367 2.531522 TCATCATATGGGCTGACGTG 57.468 50.000 2.13 0.00 0.00 4.49
358 368 3.071457 TGATTCATCATATGGGCTGACGT 59.929 43.478 2.13 0.00 0.00 4.34
359 369 3.434641 GTGATTCATCATATGGGCTGACG 59.565 47.826 2.13 0.00 39.30 4.35
360 370 3.434641 CGTGATTCATCATATGGGCTGAC 59.565 47.826 2.13 0.00 39.30 3.51
361 371 3.071457 ACGTGATTCATCATATGGGCTGA 59.929 43.478 2.13 1.48 39.30 4.26
362 372 3.405831 ACGTGATTCATCATATGGGCTG 58.594 45.455 2.13 0.00 39.30 4.85
363 373 3.777106 ACGTGATTCATCATATGGGCT 57.223 42.857 2.13 0.00 39.30 5.19
364 374 5.940192 TTTACGTGATTCATCATATGGGC 57.060 39.130 2.13 0.00 39.30 5.36
365 375 7.857389 CAGTTTTTACGTGATTCATCATATGGG 59.143 37.037 2.13 0.00 39.30 4.00
366 376 8.611757 TCAGTTTTTACGTGATTCATCATATGG 58.388 33.333 2.13 0.00 39.30 2.74
367 377 9.425893 GTCAGTTTTTACGTGATTCATCATATG 57.574 33.333 0.00 0.00 39.30 1.78
368 378 8.612619 GGTCAGTTTTTACGTGATTCATCATAT 58.387 33.333 0.00 0.00 39.30 1.78
369 379 7.822334 AGGTCAGTTTTTACGTGATTCATCATA 59.178 33.333 0.00 0.00 39.30 2.15
370 380 6.655003 AGGTCAGTTTTTACGTGATTCATCAT 59.345 34.615 0.00 0.00 39.30 2.45
371 381 5.995282 AGGTCAGTTTTTACGTGATTCATCA 59.005 36.000 0.00 0.00 0.00 3.07
372 382 6.481954 AGGTCAGTTTTTACGTGATTCATC 57.518 37.500 0.00 0.00 0.00 2.92
373 383 6.293955 CCAAGGTCAGTTTTTACGTGATTCAT 60.294 38.462 0.00 0.00 0.00 2.57
374 384 5.008217 CCAAGGTCAGTTTTTACGTGATTCA 59.992 40.000 0.00 0.00 0.00 2.57
375 385 5.449304 CCAAGGTCAGTTTTTACGTGATTC 58.551 41.667 0.00 0.00 0.00 2.52
376 386 4.261447 GCCAAGGTCAGTTTTTACGTGATT 60.261 41.667 0.00 0.00 0.00 2.57
377 387 3.252458 GCCAAGGTCAGTTTTTACGTGAT 59.748 43.478 0.00 0.00 0.00 3.06
378 388 2.614983 GCCAAGGTCAGTTTTTACGTGA 59.385 45.455 0.00 0.00 0.00 4.35
379 389 2.616842 AGCCAAGGTCAGTTTTTACGTG 59.383 45.455 0.00 0.00 0.00 4.49
380 390 2.876550 GAGCCAAGGTCAGTTTTTACGT 59.123 45.455 0.00 0.00 0.00 3.57
381 391 3.139077 AGAGCCAAGGTCAGTTTTTACG 58.861 45.455 0.00 0.00 31.89 3.18
382 392 4.154375 GCTAGAGCCAAGGTCAGTTTTTAC 59.846 45.833 0.00 0.00 34.31 2.01
383 393 4.202419 TGCTAGAGCCAAGGTCAGTTTTTA 60.202 41.667 0.00 0.00 41.18 1.52
384 394 3.149981 GCTAGAGCCAAGGTCAGTTTTT 58.850 45.455 0.00 0.00 34.31 1.94
385 395 2.106511 TGCTAGAGCCAAGGTCAGTTTT 59.893 45.455 0.00 0.00 41.18 2.43
386 396 1.699634 TGCTAGAGCCAAGGTCAGTTT 59.300 47.619 0.00 0.00 41.18 2.66
387 397 1.352083 TGCTAGAGCCAAGGTCAGTT 58.648 50.000 0.00 0.00 41.18 3.16
388 398 1.352083 TTGCTAGAGCCAAGGTCAGT 58.648 50.000 0.00 0.00 41.18 3.41
389 399 2.706339 ATTGCTAGAGCCAAGGTCAG 57.294 50.000 0.00 0.00 41.18 3.51
390 400 3.107601 AGTATTGCTAGAGCCAAGGTCA 58.892 45.455 0.00 0.00 41.18 4.02
391 401 3.133003 TGAGTATTGCTAGAGCCAAGGTC 59.867 47.826 0.00 0.00 41.18 3.85
392 402 3.107601 TGAGTATTGCTAGAGCCAAGGT 58.892 45.455 0.00 0.00 41.18 3.50
393 403 3.726607 CTGAGTATTGCTAGAGCCAAGG 58.273 50.000 0.00 0.00 41.18 3.61
394 404 3.129871 GCTGAGTATTGCTAGAGCCAAG 58.870 50.000 0.00 0.00 41.18 3.61
395 405 2.768527 AGCTGAGTATTGCTAGAGCCAA 59.231 45.455 0.00 0.00 41.18 4.52
396 406 2.363680 GAGCTGAGTATTGCTAGAGCCA 59.636 50.000 0.00 0.00 39.91 4.75
397 407 2.606795 CGAGCTGAGTATTGCTAGAGCC 60.607 54.545 0.00 0.00 39.91 4.70
398 408 2.606795 CCGAGCTGAGTATTGCTAGAGC 60.607 54.545 0.00 0.00 39.91 4.09
399 409 2.606795 GCCGAGCTGAGTATTGCTAGAG 60.607 54.545 0.00 0.00 39.91 2.43
400 410 1.338337 GCCGAGCTGAGTATTGCTAGA 59.662 52.381 0.00 0.00 39.91 2.43
401 411 1.339610 AGCCGAGCTGAGTATTGCTAG 59.660 52.381 0.00 0.00 39.91 3.42
402 412 1.403814 AGCCGAGCTGAGTATTGCTA 58.596 50.000 0.00 0.00 39.91 3.49
403 413 0.539051 AAGCCGAGCTGAGTATTGCT 59.461 50.000 0.00 0.00 39.62 3.91
404 414 0.654683 CAAGCCGAGCTGAGTATTGC 59.345 55.000 0.00 0.00 39.62 3.56
405 415 2.015736 ACAAGCCGAGCTGAGTATTG 57.984 50.000 0.00 0.00 39.62 1.90
406 416 2.770164 AACAAGCCGAGCTGAGTATT 57.230 45.000 0.00 0.00 39.62 1.89
407 417 2.770164 AAACAAGCCGAGCTGAGTAT 57.230 45.000 0.00 0.00 39.62 2.12
408 418 3.671008 TTAAACAAGCCGAGCTGAGTA 57.329 42.857 0.00 0.00 39.62 2.59
409 419 2.543777 TTAAACAAGCCGAGCTGAGT 57.456 45.000 0.00 0.00 39.62 3.41
410 420 3.896648 TTTTAAACAAGCCGAGCTGAG 57.103 42.857 0.00 0.00 39.62 3.35
411 421 3.378742 TGTTTTTAAACAAGCCGAGCTGA 59.621 39.130 5.61 0.00 45.17 4.26
412 422 3.701241 TGTTTTTAAACAAGCCGAGCTG 58.299 40.909 5.61 0.00 45.17 4.24
465 1120 1.462283 CCAATCACTGAGCTCGTTGTG 59.538 52.381 20.99 20.99 0.00 3.33
466 1121 1.800805 CCAATCACTGAGCTCGTTGT 58.199 50.000 9.64 5.13 0.00 3.32
467 1122 0.445436 GCCAATCACTGAGCTCGTTG 59.555 55.000 9.64 8.63 0.00 4.10
469 1124 0.390866 CTGCCAATCACTGAGCTCGT 60.391 55.000 9.64 7.31 0.00 4.18
471 1126 1.736681 GTTCTGCCAATCACTGAGCTC 59.263 52.381 6.82 6.82 0.00 4.09
472 1127 1.612726 GGTTCTGCCAATCACTGAGCT 60.613 52.381 0.00 0.00 37.17 4.09
473 1128 0.807496 GGTTCTGCCAATCACTGAGC 59.193 55.000 0.00 0.00 37.17 4.26
474 1129 2.189594 TGGTTCTGCCAATCACTGAG 57.810 50.000 0.00 0.00 45.94 3.35
484 1139 0.985490 ATCCCTCCTCTGGTTCTGCC 60.985 60.000 0.00 0.00 37.90 4.85
485 1140 1.794714 TATCCCTCCTCTGGTTCTGC 58.205 55.000 0.00 0.00 0.00 4.26
487 1142 2.883026 CGATATCCCTCCTCTGGTTCT 58.117 52.381 0.00 0.00 0.00 3.01
488 1143 1.273886 GCGATATCCCTCCTCTGGTTC 59.726 57.143 0.00 0.00 0.00 3.62
489 1144 1.343069 GCGATATCCCTCCTCTGGTT 58.657 55.000 0.00 0.00 0.00 3.67
490 1145 0.188587 TGCGATATCCCTCCTCTGGT 59.811 55.000 0.00 0.00 0.00 4.00
491 1146 1.206610 CATGCGATATCCCTCCTCTGG 59.793 57.143 0.00 0.00 0.00 3.86
492 1147 1.405256 GCATGCGATATCCCTCCTCTG 60.405 57.143 0.00 0.00 0.00 3.35
493 1148 0.901124 GCATGCGATATCCCTCCTCT 59.099 55.000 0.00 0.00 0.00 3.69
494 1149 0.610174 TGCATGCGATATCCCTCCTC 59.390 55.000 14.09 0.00 0.00 3.71
495 1150 1.065636 CATGCATGCGATATCCCTCCT 60.066 52.381 14.93 0.00 0.00 3.69
496 1151 1.339438 ACATGCATGCGATATCCCTCC 60.339 52.381 26.53 0.00 0.00 4.30
497 1152 1.736126 CACATGCATGCGATATCCCTC 59.264 52.381 26.53 0.00 0.00 4.30
498 1153 1.348696 TCACATGCATGCGATATCCCT 59.651 47.619 26.53 0.28 0.00 4.20
499 1154 1.812235 TCACATGCATGCGATATCCC 58.188 50.000 26.53 0.00 0.00 3.85
500 1155 3.558505 GTTTCACATGCATGCGATATCC 58.441 45.455 26.53 7.06 0.00 2.59
501 1156 3.220773 CGTTTCACATGCATGCGATATC 58.779 45.455 26.53 13.60 0.00 1.63
502 1157 2.613595 ACGTTTCACATGCATGCGATAT 59.386 40.909 26.53 3.52 0.00 1.63
503 1158 2.006169 ACGTTTCACATGCATGCGATA 58.994 42.857 26.53 14.72 0.00 2.92
504 1159 0.804364 ACGTTTCACATGCATGCGAT 59.196 45.000 26.53 4.35 0.00 4.58
505 1160 0.165727 GACGTTTCACATGCATGCGA 59.834 50.000 26.53 19.93 0.00 5.10
506 1161 0.166597 AGACGTTTCACATGCATGCG 59.833 50.000 26.53 21.78 0.00 4.73
507 1162 3.680642 ATAGACGTTTCACATGCATGC 57.319 42.857 26.53 11.82 0.00 4.06
508 1163 5.220080 GCAAAATAGACGTTTCACATGCATG 60.220 40.000 25.09 25.09 0.00 4.06
509 1164 4.858692 GCAAAATAGACGTTTCACATGCAT 59.141 37.500 0.00 0.00 0.00 3.96
510 1165 4.225984 GCAAAATAGACGTTTCACATGCA 58.774 39.130 0.00 0.00 0.00 3.96
511 1166 3.608073 GGCAAAATAGACGTTTCACATGC 59.392 43.478 0.00 0.00 0.00 4.06
513 1168 4.079253 AGGGCAAAATAGACGTTTCACAT 58.921 39.130 0.00 0.00 0.00 3.21
515 1170 4.094442 CCTAGGGCAAAATAGACGTTTCAC 59.906 45.833 0.00 0.00 0.00 3.18
518 1173 4.296621 ACCTAGGGCAAAATAGACGTTT 57.703 40.909 14.81 0.00 0.00 3.60
521 1176 3.869065 TCAACCTAGGGCAAAATAGACG 58.131 45.455 14.81 0.00 0.00 4.18
523 1178 8.288689 GTTTATTCAACCTAGGGCAAAATAGA 57.711 34.615 14.81 4.51 0.00 1.98
551 1206 6.127814 TGCATCAACAATCCTTTGAGAGAATC 60.128 38.462 0.00 0.00 36.44 2.52
554 1209 4.654915 TGCATCAACAATCCTTTGAGAGA 58.345 39.130 0.00 0.00 36.44 3.10
555 1210 5.578005 ATGCATCAACAATCCTTTGAGAG 57.422 39.130 0.00 0.00 36.44 3.20
556 1211 5.477637 TGAATGCATCAACAATCCTTTGAGA 59.522 36.000 0.00 0.00 36.44 3.27
557 1212 5.716094 TGAATGCATCAACAATCCTTTGAG 58.284 37.500 0.00 0.00 36.44 3.02
559 1214 8.072238 CATATGAATGCATCAACAATCCTTTG 57.928 34.615 0.00 0.00 42.54 2.77
575 1230 6.615264 AACTAAGCTGTCAGCATATGAATG 57.385 37.500 26.23 9.25 45.56 2.67
576 1231 6.261826 GGAAACTAAGCTGTCAGCATATGAAT 59.738 38.462 26.23 7.08 45.56 2.57
577 1232 5.586243 GGAAACTAAGCTGTCAGCATATGAA 59.414 40.000 26.23 0.00 45.56 2.57
578 1233 5.118990 GGAAACTAAGCTGTCAGCATATGA 58.881 41.667 26.23 5.88 45.56 2.15
579 1234 4.877823 TGGAAACTAAGCTGTCAGCATATG 59.122 41.667 26.23 14.82 45.56 1.78
580 1235 5.102953 TGGAAACTAAGCTGTCAGCATAT 57.897 39.130 26.23 14.17 45.56 1.78
581 1236 4.551702 TGGAAACTAAGCTGTCAGCATA 57.448 40.909 26.23 17.61 45.56 3.14
582 1237 3.423539 TGGAAACTAAGCTGTCAGCAT 57.576 42.857 26.23 17.41 45.56 3.79
583 1238 2.928801 TGGAAACTAAGCTGTCAGCA 57.071 45.000 26.23 6.14 45.56 4.41
584 1239 3.126000 GTCATGGAAACTAAGCTGTCAGC 59.874 47.826 17.48 17.48 42.84 4.26
585 1240 4.573900 AGTCATGGAAACTAAGCTGTCAG 58.426 43.478 0.00 0.00 0.00 3.51
589 1244 8.044060 TGAAAATAGTCATGGAAACTAAGCTG 57.956 34.615 0.00 0.00 33.19 4.24
590 1245 8.814038 ATGAAAATAGTCATGGAAACTAAGCT 57.186 30.769 0.00 0.00 36.86 3.74
598 1253 9.547753 GCTCTACTTATGAAAATAGTCATGGAA 57.452 33.333 0.00 0.00 38.69 3.53
599 1254 8.704668 TGCTCTACTTATGAAAATAGTCATGGA 58.295 33.333 0.00 0.00 38.69 3.41
600 1255 8.893219 TGCTCTACTTATGAAAATAGTCATGG 57.107 34.615 0.00 0.00 38.69 3.66
617 1272 9.456147 CCTAGACTTGTATATACATGCTCTACT 57.544 37.037 22.31 16.61 35.89 2.57
618 1273 9.451002 TCCTAGACTTGTATATACATGCTCTAC 57.549 37.037 22.31 12.26 35.89 2.59
619 1274 9.451002 GTCCTAGACTTGTATATACATGCTCTA 57.549 37.037 22.31 22.33 35.89 2.43
621 1276 8.343168 AGTCCTAGACTTGTATATACATGCTC 57.657 38.462 22.31 18.52 40.28 4.26
633 1288 7.365117 CCATCTGGATTTAAGTCCTAGACTTGT 60.365 40.741 17.98 6.05 44.23 3.16
634 1289 6.989169 CCATCTGGATTTAAGTCCTAGACTTG 59.011 42.308 17.98 12.75 44.23 3.16
636 1291 6.206042 ACCATCTGGATTTAAGTCCTAGACT 58.794 40.000 17.06 6.92 40.83 3.24
637 1292 6.487299 ACCATCTGGATTTAAGTCCTAGAC 57.513 41.667 17.06 0.00 39.12 2.59
639 1294 7.290248 TCCTAACCATCTGGATTTAAGTCCTAG 59.710 40.741 17.06 12.50 39.12 3.02
641 1296 5.970640 TCCTAACCATCTGGATTTAAGTCCT 59.029 40.000 17.06 0.00 39.12 3.85
642 1297 6.056236 GTCCTAACCATCTGGATTTAAGTCC 58.944 44.000 10.00 10.00 38.94 3.85
643 1298 6.056236 GGTCCTAACCATCTGGATTTAAGTC 58.944 44.000 2.55 0.00 45.68 3.01
644 1299 6.002653 GGTCCTAACCATCTGGATTTAAGT 57.997 41.667 2.55 0.00 45.68 2.24
658 1313 5.751586 TCATTGTATTTGGAGGTCCTAACC 58.248 41.667 0.00 0.00 46.87 2.85
659 1314 7.339466 ACAATCATTGTATTTGGAGGTCCTAAC 59.661 37.037 0.00 0.00 43.27 2.34
660 1315 7.410174 ACAATCATTGTATTTGGAGGTCCTAA 58.590 34.615 0.00 0.00 43.27 2.69
661 1316 6.969043 ACAATCATTGTATTTGGAGGTCCTA 58.031 36.000 0.00 0.00 43.27 2.94
662 1317 5.831103 ACAATCATTGTATTTGGAGGTCCT 58.169 37.500 0.00 0.00 43.27 3.85
664 1319 8.050778 TGTTACAATCATTGTATTTGGAGGTC 57.949 34.615 11.12 0.00 44.85 3.85
665 1320 8.415950 TTGTTACAATCATTGTATTTGGAGGT 57.584 30.769 11.12 0.00 44.85 3.85
681 1913 7.891498 AGGAAAAACTACCACTTGTTACAAT 57.109 32.000 0.00 0.00 0.00 2.71
718 1950 9.958180 TTCCTCTGTTACAATCATTGAATCTAA 57.042 29.630 3.79 0.00 0.00 2.10
720 1952 8.900781 CATTCCTCTGTTACAATCATTGAATCT 58.099 33.333 3.79 0.00 0.00 2.40
722 1954 7.616935 ACCATTCCTCTGTTACAATCATTGAAT 59.383 33.333 3.79 0.00 0.00 2.57
723 1955 6.947733 ACCATTCCTCTGTTACAATCATTGAA 59.052 34.615 3.79 0.00 0.00 2.69
724 1956 6.375174 CACCATTCCTCTGTTACAATCATTGA 59.625 38.462 3.79 0.00 0.00 2.57
727 1959 5.195940 CCACCATTCCTCTGTTACAATCAT 58.804 41.667 0.00 0.00 0.00 2.45
729 1961 4.589908 ACCACCATTCCTCTGTTACAATC 58.410 43.478 0.00 0.00 0.00 2.67
730 1962 4.657814 ACCACCATTCCTCTGTTACAAT 57.342 40.909 0.00 0.00 0.00 2.71
732 1964 5.772393 ATTACCACCATTCCTCTGTTACA 57.228 39.130 0.00 0.00 0.00 2.41
735 1967 5.255397 TCAATTACCACCATTCCTCTGTT 57.745 39.130 0.00 0.00 0.00 3.16
737 1969 5.300286 GGATTCAATTACCACCATTCCTCTG 59.700 44.000 0.00 0.00 0.00 3.35
738 1970 5.044179 TGGATTCAATTACCACCATTCCTCT 60.044 40.000 0.00 0.00 0.00 3.69
766 2423 4.791163 CGACAGACACGTGTTGAAATTTTT 59.209 37.500 24.26 5.32 34.13 1.94
787 2453 1.542472 TGGTGATTACTGCTCGTTCGA 59.458 47.619 0.00 0.00 0.00 3.71
802 2469 2.717044 CGGGTAGCATCGGTGGTGA 61.717 63.158 11.38 0.00 37.28 4.02
805 2472 1.362717 CTACGGGTAGCATCGGTGG 59.637 63.158 0.00 0.00 0.00 4.61
1183 2851 3.958798 TGGTGATAGGTGCTAGGTAGAAC 59.041 47.826 0.00 0.00 0.00 3.01
1290 2962 3.256704 AGAAGGGTGGGTAATTCACTGA 58.743 45.455 0.00 0.00 35.61 3.41
1303 2975 5.189934 ACTCCTAAATCCAGTAAGAAGGGTG 59.810 44.000 0.00 0.00 0.00 4.61
1308 2989 5.361857 CCGGTACTCCTAAATCCAGTAAGAA 59.638 44.000 0.00 0.00 0.00 2.52
1331 3012 8.934023 TCATAAGAACATAATTCCCATAACCC 57.066 34.615 0.00 0.00 0.00 4.11
1345 3026 6.803320 CGTTCAAACAGCAATCATAAGAACAT 59.197 34.615 0.00 0.00 34.19 2.71
1372 3055 5.065988 ACATACATCAAACCGAGCATTAACC 59.934 40.000 0.00 0.00 0.00 2.85
1387 3070 5.522097 CCAGCACAATACGTTACATACATCA 59.478 40.000 0.00 0.00 0.00 3.07
1388 3071 5.522460 ACCAGCACAATACGTTACATACATC 59.478 40.000 0.00 0.00 0.00 3.06
1389 3072 5.293324 CACCAGCACAATACGTTACATACAT 59.707 40.000 0.00 0.00 0.00 2.29
1390 3073 4.627900 CACCAGCACAATACGTTACATACA 59.372 41.667 0.00 0.00 0.00 2.29
1391 3074 4.033587 CCACCAGCACAATACGTTACATAC 59.966 45.833 0.00 0.00 0.00 2.39
1392 3075 4.081586 TCCACCAGCACAATACGTTACATA 60.082 41.667 0.00 0.00 0.00 2.29
1431 3267 8.251721 AGGTACCTTCAAGAACATATATATCGC 58.748 37.037 9.21 0.00 0.00 4.58
1587 3638 1.635487 TCCTAGTCCCAAGCAAAGCAT 59.365 47.619 0.00 0.00 0.00 3.79
1621 3672 2.375014 ACCAGGGGAAAACGTTTGAT 57.625 45.000 15.46 0.00 0.00 2.57
1632 3683 8.069356 TCTCAATTTACTAGTATAACCAGGGGA 58.931 37.037 2.79 0.00 0.00 4.81
1633 3684 8.258850 TCTCAATTTACTAGTATAACCAGGGG 57.741 38.462 2.79 0.00 0.00 4.79
1657 3708 7.041030 GCATAAAGAAGCTAAGGTTAAGGGATC 60.041 40.741 0.00 0.00 0.00 3.36
1684 3735 4.632974 GGGGCATGGCTAGGCTCG 62.633 72.222 19.78 9.35 34.15 5.03
1727 3778 4.170468 CCAGAAGGGCAGGTATGTAAAT 57.830 45.455 0.00 0.00 0.00 1.40
1792 4006 1.356124 AAGACACTCCAGTCCATGCT 58.644 50.000 0.00 0.00 39.34 3.79
1828 4042 6.040616 CGGAGGGAGTAACATATTAGTTGTCT 59.959 42.308 0.00 0.00 33.07 3.41
1838 4052 1.288633 TGGGACGGAGGGAGTAACATA 59.711 52.381 0.00 0.00 0.00 2.29
1867 4113 4.039032 GCTTGTTAGCTTGCAAAAACGTA 58.961 39.130 0.00 0.00 44.27 3.57
2053 4441 6.637658 ACGTTGTGTGGGAAATAAAAATAACG 59.362 34.615 0.00 0.00 40.96 3.18
2095 4498 8.037166 CCAGTCAGATACTATTAGCATGCATAA 58.963 37.037 21.98 15.16 35.76 1.90
2136 4539 9.939802 CTAGTACAAAATTAGGTCCCATATACC 57.060 37.037 0.00 0.00 37.27 2.73
2138 4541 9.388672 AGCTAGTACAAAATTAGGTCCCATATA 57.611 33.333 0.00 0.00 0.00 0.86
2139 4542 8.276453 AGCTAGTACAAAATTAGGTCCCATAT 57.724 34.615 0.00 0.00 0.00 1.78
2244 4649 0.041090 CCCCATGCACCCTTAACCTT 59.959 55.000 0.00 0.00 0.00 3.50
2307 4752 3.056821 TCAGCGCACACTGAAACTACTAT 60.057 43.478 11.47 0.00 43.59 2.12
2308 4753 2.295070 TCAGCGCACACTGAAACTACTA 59.705 45.455 11.47 0.00 43.59 1.82
2309 4754 1.068588 TCAGCGCACACTGAAACTACT 59.931 47.619 11.47 0.00 43.59 2.57
2310 4755 1.497991 TCAGCGCACACTGAAACTAC 58.502 50.000 11.47 0.00 43.59 2.73
2369 4814 1.959899 GCACGATGTTGCTCACTCCG 61.960 60.000 0.00 0.00 39.59 4.63
2442 4970 8.220755 TCGGCTGCTGAATTAAAAGTTTATAT 57.779 30.769 9.09 0.00 0.00 0.86
2450 4978 5.950758 TTAACTCGGCTGCTGAATTAAAA 57.049 34.783 19.34 3.65 0.00 1.52
2520 5049 9.806448 TGCATTAGATACACCAACCATATTTAT 57.194 29.630 0.00 0.00 0.00 1.40
2660 5270 2.772568 CATTTCAACGGTGAAGTGCA 57.227 45.000 23.32 6.76 44.49 4.57
2798 5409 2.485657 GGCTTGCCAGAGGAATAGGTAC 60.486 54.545 6.79 0.00 0.00 3.34
2815 5426 2.999063 GCAATGGGCAGGTGGCTT 60.999 61.111 3.28 0.00 43.97 4.35
2904 5515 3.991051 CACCGGTCGTGGAGCTGT 61.991 66.667 2.59 0.00 38.96 4.40
2914 5525 0.672711 GCCAAGAAGTACCACCGGTC 60.673 60.000 2.59 0.00 37.09 4.79
2918 5529 1.202891 AGGTTGCCAAGAAGTACCACC 60.203 52.381 0.00 0.00 0.00 4.61
2992 5603 3.616560 GCGGACAACTTGAGGAACTATGA 60.617 47.826 0.00 0.00 41.55 2.15
3005 5617 0.396435 TGAAGTGGATGCGGACAACT 59.604 50.000 0.00 0.00 0.00 3.16
3040 5653 2.247635 AGCTGTAGGGGAGGTAGATCAA 59.752 50.000 0.00 0.00 0.00 2.57
3113 5728 3.724374 CAAGGTCAAGACGGTGTTCTTA 58.276 45.455 0.00 0.00 33.89 2.10
3198 5814 3.236047 TGGTGTAGCACAAGGAGTCTTA 58.764 45.455 1.61 0.00 35.86 2.10
3234 5854 4.112634 TGAGAGTGTTGAAGACAAAGACG 58.887 43.478 0.00 0.00 40.65 4.18
3253 5874 1.747709 CTGGAATGGAGGTGCTTGAG 58.252 55.000 0.00 0.00 0.00 3.02
3322 5943 2.362077 TCCTTTTTCCAAGAGCAGCAAC 59.638 45.455 0.00 0.00 0.00 4.17
3399 6020 2.185004 ACTCAACAGTTCAATCCCGG 57.815 50.000 0.00 0.00 0.00 5.73
3413 6034 8.690203 TTGGATTGAGACTTTTGAATACTCAA 57.310 30.769 0.00 0.00 46.48 3.02
3426 6047 4.703897 TCGTGTTTTCTTGGATTGAGACT 58.296 39.130 0.00 0.00 0.00 3.24
3486 6107 3.559069 CCATAATTCCAGGTGCAGACAT 58.441 45.455 0.00 0.00 0.00 3.06
3504 6125 1.131638 ATCACACGTGCCTATCCCAT 58.868 50.000 17.22 0.00 0.00 4.00
3555 6176 1.556238 CCCGCCCTCCCCCTATAAATA 60.556 57.143 0.00 0.00 0.00 1.40
3615 6236 9.874215 CAACTAGCAAAACATCAGATATGTATG 57.126 33.333 0.00 0.00 0.00 2.39
3791 6413 3.843422 ACCCAATTGAATGGACAGAACA 58.157 40.909 7.12 0.00 43.54 3.18
3859 6481 8.565416 GGAATATACAGAAAATCCCCTTTAACG 58.435 37.037 0.00 0.00 0.00 3.18
3893 6530 7.602753 ACAGTTATAAAGGATTTGGAAACAGC 58.397 34.615 0.00 0.00 44.54 4.40
3896 6533 9.626045 CAAGACAGTTATAAAGGATTTGGAAAC 57.374 33.333 0.00 0.00 39.63 2.78
3939 6708 0.037160 TTGCCAGCTGAGATGAGCAA 59.963 50.000 17.39 17.84 41.83 3.91
4046 6815 6.790285 AAAAATGCAGCAAACTAAAGATGG 57.210 33.333 0.00 0.00 0.00 3.51
4112 6882 4.447724 GCGAATTATATTGACAGGAGCGAA 59.552 41.667 0.00 0.00 0.00 4.70
4131 6909 1.031571 GCAATGGAGTGGATGGCGAA 61.032 55.000 0.00 0.00 0.00 4.70
4176 6954 6.283161 GGCACCACTAAAACGTCTTATATC 57.717 41.667 0.00 0.00 0.00 1.63
4216 7191 1.692411 ACAAGAGCCCCAAACAAGTC 58.308 50.000 0.00 0.00 0.00 3.01
4259 7234 2.594303 CAACTGTGGCCCAAGCGA 60.594 61.111 0.00 0.00 41.24 4.93
4292 7267 1.607178 CCATGCCCAACAGCCAGAA 60.607 57.895 0.00 0.00 0.00 3.02
4367 7344 8.421249 AATGAGGTTCCAACAATATGAAAGAA 57.579 30.769 0.00 0.00 0.00 2.52
4368 7345 7.890127 AGAATGAGGTTCCAACAATATGAAAGA 59.110 33.333 0.00 0.00 37.56 2.52
4377 7354 5.200483 ACTTCAAGAATGAGGTTCCAACAA 58.800 37.500 0.00 0.00 42.67 2.83
4402 7379 4.066490 TGAATACAACCCCTTACACGTTG 58.934 43.478 0.00 0.00 42.05 4.10
4472 7939 4.092968 ACACGCCACTTTTCTCGATAAATC 59.907 41.667 0.00 0.00 0.00 2.17
4475 7942 3.034721 ACACGCCACTTTTCTCGATAA 57.965 42.857 0.00 0.00 0.00 1.75
4476 7943 2.736144 ACACGCCACTTTTCTCGATA 57.264 45.000 0.00 0.00 0.00 2.92
4478 7945 1.658994 AAACACGCCACTTTTCTCGA 58.341 45.000 0.00 0.00 0.00 4.04
4479 7946 2.108700 CAAAACACGCCACTTTTCTCG 58.891 47.619 0.00 0.00 0.00 4.04
4480 7947 2.159296 ACCAAAACACGCCACTTTTCTC 60.159 45.455 0.00 0.00 0.00 2.87
4481 7948 1.822371 ACCAAAACACGCCACTTTTCT 59.178 42.857 0.00 0.00 0.00 2.52
4482 7949 1.923864 CACCAAAACACGCCACTTTTC 59.076 47.619 0.00 0.00 0.00 2.29
4483 7950 1.546476 TCACCAAAACACGCCACTTTT 59.454 42.857 0.00 0.00 0.00 2.27
4484 7951 1.178276 TCACCAAAACACGCCACTTT 58.822 45.000 0.00 0.00 0.00 2.66
4494 7961 7.535489 AATCTACGCTTAGTATCACCAAAAC 57.465 36.000 0.00 0.00 34.34 2.43
4507 7982 1.395608 GCCGTGCAAAATCTACGCTTA 59.604 47.619 0.00 0.00 36.56 3.09
4510 7985 1.226295 GGCCGTGCAAAATCTACGC 60.226 57.895 0.00 0.00 36.56 4.42
4512 7987 1.303091 ACGGGCCGTGCAAAATCTAC 61.303 55.000 33.71 0.00 39.18 2.59
4528 8003 1.291184 ACATGTCACGCATCACACGG 61.291 55.000 0.00 0.00 35.19 4.94
4561 8045 1.517475 GGCGTTGTGTGCGGTTTTT 60.517 52.632 0.00 0.00 0.00 1.94
4567 8051 4.671549 CTGCTGGCGTTGTGTGCG 62.672 66.667 0.00 0.00 0.00 5.34
4582 8066 1.595466 GATGGAGGATGCAGCTTCTG 58.405 55.000 14.08 0.00 42.42 3.02
4588 8072 3.535561 ACTTTAACGATGGAGGATGCAG 58.464 45.455 0.00 0.00 42.42 4.41
4590 8074 8.251721 AGTATATACTTTAACGATGGAGGATGC 58.748 37.037 9.71 0.00 31.13 3.91
4594 8093 7.249147 CGGAGTATATACTTTAACGATGGAGG 58.751 42.308 16.46 0.00 36.50 4.30
4605 8112 6.655003 CCCAATTGATGCGGAGTATATACTTT 59.345 38.462 16.46 1.34 36.50 2.66
4607 8114 5.248477 ACCCAATTGATGCGGAGTATATACT 59.752 40.000 15.37 15.37 39.71 2.12
4608 8115 5.488341 ACCCAATTGATGCGGAGTATATAC 58.512 41.667 7.12 4.60 28.93 1.47
4609 8116 5.755409 ACCCAATTGATGCGGAGTATATA 57.245 39.130 7.12 0.00 28.93 0.86
4610 8117 4.640771 ACCCAATTGATGCGGAGTATAT 57.359 40.909 7.12 0.00 28.93 0.86
4611 8118 5.247337 TCATACCCAATTGATGCGGAGTATA 59.753 40.000 7.12 0.00 28.93 1.47
4612 8119 4.041567 TCATACCCAATTGATGCGGAGTAT 59.958 41.667 7.12 0.28 33.83 2.12
4613 8120 3.389656 TCATACCCAATTGATGCGGAGTA 59.610 43.478 7.12 0.00 0.00 2.59
4614 8121 2.172505 TCATACCCAATTGATGCGGAGT 59.827 45.455 7.12 0.00 0.00 3.85
4615 8122 2.810274 CTCATACCCAATTGATGCGGAG 59.190 50.000 7.12 4.67 0.00 4.63
4616 8123 2.172505 ACTCATACCCAATTGATGCGGA 59.827 45.455 7.12 0.00 0.00 5.54
4617 8124 2.575532 ACTCATACCCAATTGATGCGG 58.424 47.619 7.12 1.64 0.00 5.69
4618 8125 4.024893 GTGTACTCATACCCAATTGATGCG 60.025 45.833 7.12 0.60 0.00 4.73
4619 8126 5.008019 CAGTGTACTCATACCCAATTGATGC 59.992 44.000 7.12 0.00 0.00 3.91
4620 8127 5.008019 GCAGTGTACTCATACCCAATTGATG 59.992 44.000 7.12 3.07 0.00 3.07
4621 8128 5.126067 GCAGTGTACTCATACCCAATTGAT 58.874 41.667 7.12 0.00 0.00 2.57
4622 8129 4.019771 TGCAGTGTACTCATACCCAATTGA 60.020 41.667 7.12 0.00 0.00 2.57
4623 8130 4.260985 TGCAGTGTACTCATACCCAATTG 58.739 43.478 0.00 0.00 0.00 2.32
4624 8131 4.568072 TGCAGTGTACTCATACCCAATT 57.432 40.909 0.00 0.00 0.00 2.32
4625 8132 4.410228 AGATGCAGTGTACTCATACCCAAT 59.590 41.667 0.00 0.00 0.00 3.16
4626 8133 3.774766 AGATGCAGTGTACTCATACCCAA 59.225 43.478 0.00 0.00 0.00 4.12
4627 8134 3.374764 AGATGCAGTGTACTCATACCCA 58.625 45.455 0.00 0.00 0.00 4.51
4628 8135 4.122776 CAAGATGCAGTGTACTCATACCC 58.877 47.826 0.00 0.00 0.00 3.69
4629 8136 4.759782 ACAAGATGCAGTGTACTCATACC 58.240 43.478 0.00 0.00 0.00 2.73
4630 8137 5.655488 AGACAAGATGCAGTGTACTCATAC 58.345 41.667 0.00 0.00 0.00 2.39
4631 8138 5.418840 TGAGACAAGATGCAGTGTACTCATA 59.581 40.000 16.81 5.55 32.22 2.15
4632 8139 4.221482 TGAGACAAGATGCAGTGTACTCAT 59.779 41.667 16.81 0.00 32.22 2.90
4633 8140 3.573967 TGAGACAAGATGCAGTGTACTCA 59.426 43.478 16.81 16.81 33.48 3.41
4634 8141 3.923461 GTGAGACAAGATGCAGTGTACTC 59.077 47.826 0.00 6.53 0.00 2.59
4635 8142 3.306364 GGTGAGACAAGATGCAGTGTACT 60.306 47.826 0.00 0.00 0.00 2.73
4636 8143 2.996621 GGTGAGACAAGATGCAGTGTAC 59.003 50.000 0.00 0.00 0.00 2.90
4637 8144 2.352715 CGGTGAGACAAGATGCAGTGTA 60.353 50.000 0.00 0.00 0.00 2.90
4638 8145 1.606480 CGGTGAGACAAGATGCAGTGT 60.606 52.381 0.00 0.00 0.00 3.55
4639 8146 1.073964 CGGTGAGACAAGATGCAGTG 58.926 55.000 0.00 0.00 0.00 3.66
4665 8172 1.599071 CTAACGCACGATGAATGGCAT 59.401 47.619 0.00 0.00 40.77 4.40
4809 8317 3.123050 GCTCATGCATACACGTGTGATA 58.877 45.455 30.83 12.08 39.41 2.15
4821 8329 1.146930 CGTGGGTAGGCTCATGCAT 59.853 57.895 0.00 0.00 41.91 3.96
4862 8374 0.185175 GAGGAGAGGAGGGGAGAGAC 59.815 65.000 0.00 0.00 0.00 3.36
4863 8375 0.047176 AGAGGAGAGGAGGGGAGAGA 59.953 60.000 0.00 0.00 0.00 3.10
4864 8376 0.478507 GAGAGGAGAGGAGGGGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
4865 8377 0.996762 GGAGAGGAGAGGAGGGGAGA 60.997 65.000 0.00 0.00 0.00 3.71
4866 8378 1.292941 TGGAGAGGAGAGGAGGGGAG 61.293 65.000 0.00 0.00 0.00 4.30
4867 8379 1.230650 TGGAGAGGAGAGGAGGGGA 60.231 63.158 0.00 0.00 0.00 4.81
4869 8381 1.075600 GGTGGAGAGGAGAGGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
4871 8383 2.176798 AGTATGGTGGAGAGGAGAGGAG 59.823 54.545 0.00 0.00 0.00 3.69
4872 8384 2.175931 GAGTATGGTGGAGAGGAGAGGA 59.824 54.545 0.00 0.00 0.00 3.71
4886 8398 1.603172 CGGGAAAGCGCTAGAGTATGG 60.603 57.143 12.05 0.00 0.00 2.74
4889 8401 1.133790 GTTCGGGAAAGCGCTAGAGTA 59.866 52.381 12.05 0.00 0.00 2.59
4890 8402 0.108756 GTTCGGGAAAGCGCTAGAGT 60.109 55.000 12.05 0.00 0.00 3.24
4892 8404 0.389426 GTGTTCGGGAAAGCGCTAGA 60.389 55.000 12.05 2.56 0.00 2.43
4894 8406 0.249953 TTGTGTTCGGGAAAGCGCTA 60.250 50.000 12.05 0.00 0.00 4.26
4895 8407 1.098712 TTTGTGTTCGGGAAAGCGCT 61.099 50.000 2.64 2.64 0.00 5.92
4897 8409 1.064952 AGTTTTGTGTTCGGGAAAGCG 59.935 47.619 0.00 0.00 0.00 4.68
4900 8412 1.064357 GCGAGTTTTGTGTTCGGGAAA 59.936 47.619 0.00 0.00 35.05 3.13
4901 8413 0.658897 GCGAGTTTTGTGTTCGGGAA 59.341 50.000 0.00 0.00 35.05 3.97
4902 8414 0.462225 TGCGAGTTTTGTGTTCGGGA 60.462 50.000 0.00 0.00 35.05 5.14
4904 8416 0.375454 TGTGCGAGTTTTGTGTTCGG 59.625 50.000 0.00 0.00 35.05 4.30
4905 8417 1.730176 CTGTGCGAGTTTTGTGTTCG 58.270 50.000 0.00 0.00 37.40 3.95
4906 8418 1.202132 TGCTGTGCGAGTTTTGTGTTC 60.202 47.619 0.00 0.00 0.00 3.18
4907 8419 0.808125 TGCTGTGCGAGTTTTGTGTT 59.192 45.000 0.00 0.00 0.00 3.32
4918 8445 1.640069 CCATCTTCGATGCTGTGCG 59.360 57.895 2.07 0.00 0.00 5.34
4925 8456 1.958205 GAGGCCGCCATCTTCGATG 60.958 63.158 13.15 0.00 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.