Multiple sequence alignment - TraesCS5B01G241700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G241700 chr5B 100.000 4358 0 0 1 4358 421623182 421618825 0.000000e+00 8048.0
1 TraesCS5B01G241700 chr5B 80.523 688 91 28 928 1586 421718147 421717474 5.070000e-134 488.0
2 TraesCS5B01G241700 chr5B 90.301 299 28 1 1865 2162 421612441 421612143 1.470000e-104 390.0
3 TraesCS5B01G241700 chr5B 90.068 292 29 0 1871 2162 421717398 421717107 3.180000e-101 379.0
4 TraesCS5B01G241700 chr5B 83.425 362 43 5 3009 3363 421696026 421695675 1.960000e-83 320.0
5 TraesCS5B01G241700 chr5B 77.984 486 59 22 2234 2714 421612021 421611579 1.200000e-65 261.0
6 TraesCS5B01G241700 chr5B 80.822 292 46 5 2610 2892 421716575 421716285 2.040000e-53 220.0
7 TraesCS5B01G241700 chr5B 82.474 194 30 3 103 295 56851104 56851294 2.700000e-37 167.0
8 TraesCS5B01G241700 chr5D 90.512 2150 138 36 1853 3968 356838222 356836105 0.000000e+00 2780.0
9 TraesCS5B01G241700 chr5D 89.827 1327 106 15 103 1406 356839806 356838486 0.000000e+00 1676.0
10 TraesCS5B01G241700 chr5D 81.093 677 98 26 928 1583 357017167 357016500 8.360000e-142 514.0
11 TraesCS5B01G241700 chr5D 89.667 300 31 0 1863 2162 356800433 356800134 2.460000e-102 383.0
12 TraesCS5B01G241700 chr5D 83.754 357 37 10 3016 3363 356909656 356909312 7.030000e-83 318.0
13 TraesCS5B01G241700 chr5D 83.102 361 48 10 3009 3361 357015087 357014732 2.530000e-82 316.0
14 TraesCS5B01G241700 chr5D 76.618 479 75 17 2244 2714 356800025 356799576 3.390000e-56 230.0
15 TraesCS5B01G241700 chr5D 90.000 170 9 3 1424 1585 356838426 356838257 3.410000e-51 213.0
16 TraesCS5B01G241700 chr5D 80.769 208 36 4 95 300 244360587 244360792 4.510000e-35 159.0
17 TraesCS5B01G241700 chr5D 76.042 288 34 15 2243 2525 356688424 356688167 2.750000e-22 117.0
18 TraesCS5B01G241700 chr5A 88.542 1571 106 39 2168 3693 458192176 458190635 0.000000e+00 1836.0
19 TraesCS5B01G241700 chr5A 87.838 1332 85 26 2241 3539 456069587 456070874 0.000000e+00 1491.0
20 TraesCS5B01G241700 chr5A 92.284 972 52 11 449 1406 458193758 458192796 0.000000e+00 1358.0
21 TraesCS5B01G241700 chr5A 90.471 913 48 20 708 1585 456068251 456069159 0.000000e+00 1168.0
22 TraesCS5B01G241700 chr5A 81.618 680 88 27 931 1586 458279370 458278704 2.980000e-146 529.0
23 TraesCS5B01G241700 chr5A 94.516 310 16 1 1853 2162 458192535 458192227 1.100000e-130 477.0
24 TraesCS5B01G241700 chr5A 93.750 304 18 1 1853 2156 456069194 456069496 5.140000e-124 455.0
25 TraesCS5B01G241700 chr5A 83.077 520 69 16 1073 1584 458273977 458273469 5.140000e-124 455.0
26 TraesCS5B01G241700 chr5A 80.064 627 91 23 964 1573 456087733 456088342 6.690000e-118 435.0
27 TraesCS5B01G241700 chr5A 92.000 300 24 0 1863 2162 456088398 456088697 5.210000e-114 422.0
28 TraesCS5B01G241700 chr5A 91.118 304 20 6 413 711 456066223 456066524 5.250000e-109 405.0
29 TraesCS5B01G241700 chr5A 85.112 403 53 6 999 1396 458179303 458178903 5.250000e-109 405.0
30 TraesCS5B01G241700 chr5A 90.753 292 27 0 1871 2162 458278628 458278337 1.470000e-104 390.0
31 TraesCS5B01G241700 chr5A 90.476 294 28 0 1869 2162 458177787 458177494 5.290000e-104 388.0
32 TraesCS5B01G241700 chr5A 82.967 364 41 9 3009 3363 458225809 458225458 4.230000e-80 309.0
33 TraesCS5B01G241700 chr5A 78.351 485 64 22 2234 2714 458177401 458176954 4.290000e-70 276.0
34 TraesCS5B01G241700 chr5A 79.167 408 61 14 2988 3382 458176182 458175786 1.200000e-65 261.0
35 TraesCS5B01G241700 chr5A 90.050 201 12 3 3569 3763 456072037 456072235 2.010000e-63 254.0
36 TraesCS5B01G241700 chr5A 76.494 502 67 28 2234 2728 456088795 456089252 4.390000e-55 226.0
37 TraesCS5B01G241700 chr5A 91.566 166 10 2 1424 1585 458192736 458192571 4.390000e-55 226.0
38 TraesCS5B01G241700 chr5A 82.627 236 26 6 147 378 456065500 456065724 1.240000e-45 195.0
39 TraesCS5B01G241700 chr5A 81.863 204 30 6 103 301 470179040 470179241 9.700000e-37 165.0
40 TraesCS5B01G241700 chr6D 82.000 200 26 7 1628 1824 50301 50493 1.250000e-35 161.0
41 TraesCS5B01G241700 chr6B 80.751 213 35 5 103 311 92187126 92186916 1.250000e-35 161.0
42 TraesCS5B01G241700 chr4D 81.633 196 32 4 103 297 8274607 8274415 4.510000e-35 159.0
43 TraesCS5B01G241700 chr3D 81.633 196 33 3 103 297 582706196 582706389 4.510000e-35 159.0
44 TraesCS5B01G241700 chr1B 81.429 210 26 13 95 296 330554243 330554039 4.510000e-35 159.0
45 TraesCS5B01G241700 chrUn 80.282 213 36 5 103 311 257411843 257411633 5.840000e-34 156.0
46 TraesCS5B01G241700 chr3B 100.000 29 0 0 70 98 79485821 79485849 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G241700 chr5B 421618825 421623182 4357 True 8048.000000 8048 100.000000 1 4358 1 chr5B.!!$R1 4357
1 TraesCS5B01G241700 chr5B 421716285 421718147 1862 True 362.333333 488 83.804333 928 2892 3 chr5B.!!$R4 1964
2 TraesCS5B01G241700 chr5B 421611579 421612441 862 True 325.500000 390 84.142500 1865 2714 2 chr5B.!!$R3 849
3 TraesCS5B01G241700 chr5D 356836105 356839806 3701 True 1556.333333 2780 90.113000 103 3968 3 chr5D.!!$R4 3865
4 TraesCS5B01G241700 chr5D 357014732 357017167 2435 True 415.000000 514 82.097500 928 3361 2 chr5D.!!$R5 2433
5 TraesCS5B01G241700 chr5D 356799576 356800433 857 True 306.500000 383 83.142500 1863 2714 2 chr5D.!!$R3 851
6 TraesCS5B01G241700 chr5A 458190635 458193758 3123 True 974.250000 1836 91.727000 449 3693 4 chr5A.!!$R4 3244
7 TraesCS5B01G241700 chr5A 456065500 456072235 6735 False 661.333333 1491 89.309000 147 3763 6 chr5A.!!$F2 3616
8 TraesCS5B01G241700 chr5A 458278337 458279370 1033 True 459.500000 529 86.185500 931 2162 2 chr5A.!!$R5 1231
9 TraesCS5B01G241700 chr5A 458273469 458273977 508 True 455.000000 455 83.077000 1073 1584 1 chr5A.!!$R2 511
10 TraesCS5B01G241700 chr5A 456087733 456089252 1519 False 361.000000 435 82.852667 964 2728 3 chr5A.!!$F3 1764
11 TraesCS5B01G241700 chr5A 458175786 458179303 3517 True 332.500000 405 83.276500 999 3382 4 chr5A.!!$R3 2383

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.179004 TTGCTGGATTTGGTCGGTGT 60.179 50.0 0.0 0.0 0.00 4.16 F
1481 4638 0.107945 GTCCAGGATGCTCTTCGCTT 60.108 55.0 0.0 0.0 40.11 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1543 4700 0.110238 CCACGCGTTCATGTTTCTGG 60.110 55.0 10.22 0.0 0.00 3.86 R
3412 7413 0.037590 AAACCGCCCATAGCAAGTGA 59.962 50.0 0.00 0.0 44.04 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.362279 CATATTTTGCTGGATTTGGTCGG 58.638 43.478 0.00 0.00 0.00 4.79
23 24 1.698506 TTTTGCTGGATTTGGTCGGT 58.301 45.000 0.00 0.00 0.00 4.69
24 25 0.958091 TTTGCTGGATTTGGTCGGTG 59.042 50.000 0.00 0.00 0.00 4.94
25 26 0.179004 TTGCTGGATTTGGTCGGTGT 60.179 50.000 0.00 0.00 0.00 4.16
26 27 0.179004 TGCTGGATTTGGTCGGTGTT 60.179 50.000 0.00 0.00 0.00 3.32
27 28 0.958822 GCTGGATTTGGTCGGTGTTT 59.041 50.000 0.00 0.00 0.00 2.83
28 29 2.156098 GCTGGATTTGGTCGGTGTTTA 58.844 47.619 0.00 0.00 0.00 2.01
29 30 2.752903 GCTGGATTTGGTCGGTGTTTAT 59.247 45.455 0.00 0.00 0.00 1.40
30 31 3.181500 GCTGGATTTGGTCGGTGTTTATC 60.181 47.826 0.00 0.00 0.00 1.75
31 32 4.261801 CTGGATTTGGTCGGTGTTTATCT 58.738 43.478 0.00 0.00 0.00 1.98
32 33 4.658063 TGGATTTGGTCGGTGTTTATCTT 58.342 39.130 0.00 0.00 0.00 2.40
33 34 5.074115 TGGATTTGGTCGGTGTTTATCTTT 58.926 37.500 0.00 0.00 0.00 2.52
34 35 5.048364 TGGATTTGGTCGGTGTTTATCTTTG 60.048 40.000 0.00 0.00 0.00 2.77
35 36 4.839668 TTTGGTCGGTGTTTATCTTTGG 57.160 40.909 0.00 0.00 0.00 3.28
36 37 3.495434 TGGTCGGTGTTTATCTTTGGT 57.505 42.857 0.00 0.00 0.00 3.67
37 38 3.142951 TGGTCGGTGTTTATCTTTGGTG 58.857 45.455 0.00 0.00 0.00 4.17
38 39 3.181453 TGGTCGGTGTTTATCTTTGGTGA 60.181 43.478 0.00 0.00 0.00 4.02
39 40 3.816523 GGTCGGTGTTTATCTTTGGTGAA 59.183 43.478 0.00 0.00 0.00 3.18
40 41 4.457949 GGTCGGTGTTTATCTTTGGTGAAT 59.542 41.667 0.00 0.00 0.00 2.57
41 42 5.391629 GGTCGGTGTTTATCTTTGGTGAATC 60.392 44.000 0.00 0.00 0.00 2.52
42 43 5.411669 GTCGGTGTTTATCTTTGGTGAATCT 59.588 40.000 0.00 0.00 0.00 2.40
43 44 5.411361 TCGGTGTTTATCTTTGGTGAATCTG 59.589 40.000 0.00 0.00 0.00 2.90
44 45 5.402398 GGTGTTTATCTTTGGTGAATCTGC 58.598 41.667 0.00 0.00 0.00 4.26
45 46 5.183904 GGTGTTTATCTTTGGTGAATCTGCT 59.816 40.000 0.00 0.00 0.00 4.24
46 47 6.294731 GGTGTTTATCTTTGGTGAATCTGCTT 60.295 38.462 0.00 0.00 0.00 3.91
47 48 7.094377 GGTGTTTATCTTTGGTGAATCTGCTTA 60.094 37.037 0.00 0.00 0.00 3.09
48 49 7.965107 GTGTTTATCTTTGGTGAATCTGCTTAG 59.035 37.037 0.00 0.00 0.00 2.18
49 50 7.882791 TGTTTATCTTTGGTGAATCTGCTTAGA 59.117 33.333 0.00 0.00 0.00 2.10
50 51 8.897752 GTTTATCTTTGGTGAATCTGCTTAGAT 58.102 33.333 0.00 0.00 0.00 1.98
51 52 9.466497 TTTATCTTTGGTGAATCTGCTTAGATT 57.534 29.630 2.41 2.41 40.81 2.40
62 63 7.934855 AATCTGCTTAGATTCAGTCATTGTT 57.065 32.000 0.00 0.00 33.66 2.83
63 64 6.974932 TCTGCTTAGATTCAGTCATTGTTC 57.025 37.500 0.00 0.00 0.00 3.18
64 65 5.578336 TCTGCTTAGATTCAGTCATTGTTCG 59.422 40.000 0.00 0.00 0.00 3.95
65 66 5.237815 TGCTTAGATTCAGTCATTGTTCGT 58.762 37.500 0.00 0.00 0.00 3.85
66 67 5.348724 TGCTTAGATTCAGTCATTGTTCGTC 59.651 40.000 0.00 0.00 0.00 4.20
67 68 5.578727 GCTTAGATTCAGTCATTGTTCGTCT 59.421 40.000 0.00 0.00 0.00 4.18
68 69 6.454848 GCTTAGATTCAGTCATTGTTCGTCTG 60.455 42.308 0.00 0.00 0.00 3.51
69 70 3.681897 AGATTCAGTCATTGTTCGTCTGC 59.318 43.478 0.00 0.00 0.00 4.26
70 71 1.418373 TCAGTCATTGTTCGTCTGCG 58.582 50.000 0.00 0.00 39.92 5.18
71 72 1.139989 CAGTCATTGTTCGTCTGCGT 58.860 50.000 0.00 0.00 39.49 5.24
72 73 1.526887 CAGTCATTGTTCGTCTGCGTT 59.473 47.619 0.00 0.00 39.49 4.84
73 74 2.032894 CAGTCATTGTTCGTCTGCGTTT 60.033 45.455 0.00 0.00 39.49 3.60
74 75 2.032894 AGTCATTGTTCGTCTGCGTTTG 60.033 45.455 0.00 0.00 39.49 2.93
75 76 1.937223 TCATTGTTCGTCTGCGTTTGT 59.063 42.857 0.00 0.00 39.49 2.83
76 77 2.036217 CATTGTTCGTCTGCGTTTGTG 58.964 47.619 0.00 0.00 39.49 3.33
77 78 1.080298 TTGTTCGTCTGCGTTTGTGT 58.920 45.000 0.00 0.00 39.49 3.72
78 79 0.371989 TGTTCGTCTGCGTTTGTGTG 59.628 50.000 0.00 0.00 39.49 3.82
79 80 0.372334 GTTCGTCTGCGTTTGTGTGT 59.628 50.000 0.00 0.00 39.49 3.72
80 81 0.648441 TTCGTCTGCGTTTGTGTGTC 59.352 50.000 0.00 0.00 39.49 3.67
81 82 0.179121 TCGTCTGCGTTTGTGTGTCT 60.179 50.000 0.00 0.00 39.49 3.41
82 83 1.065851 TCGTCTGCGTTTGTGTGTCTA 59.934 47.619 0.00 0.00 39.49 2.59
83 84 1.189446 CGTCTGCGTTTGTGTGTCTAC 59.811 52.381 0.00 0.00 0.00 2.59
84 85 2.198406 GTCTGCGTTTGTGTGTCTACA 58.802 47.619 0.00 0.00 0.00 2.74
85 86 2.218759 GTCTGCGTTTGTGTGTCTACAG 59.781 50.000 0.00 0.00 37.52 2.74
86 87 1.526887 CTGCGTTTGTGTGTCTACAGG 59.473 52.381 0.00 0.00 37.52 4.00
87 88 1.134640 TGCGTTTGTGTGTCTACAGGT 60.135 47.619 0.00 0.00 37.52 4.00
88 89 1.937899 GCGTTTGTGTGTCTACAGGTT 59.062 47.619 0.00 0.00 37.52 3.50
89 90 3.125316 GCGTTTGTGTGTCTACAGGTTA 58.875 45.455 0.00 0.00 37.52 2.85
90 91 3.183775 GCGTTTGTGTGTCTACAGGTTAG 59.816 47.826 0.00 0.00 37.52 2.34
91 92 4.613944 CGTTTGTGTGTCTACAGGTTAGA 58.386 43.478 0.00 0.00 37.52 2.10
92 93 5.227908 CGTTTGTGTGTCTACAGGTTAGAT 58.772 41.667 0.00 0.00 37.52 1.98
93 94 5.345202 CGTTTGTGTGTCTACAGGTTAGATC 59.655 44.000 0.00 0.00 37.52 2.75
94 95 5.401531 TTGTGTGTCTACAGGTTAGATCC 57.598 43.478 0.00 0.00 37.52 3.36
95 96 4.673968 TGTGTGTCTACAGGTTAGATCCT 58.326 43.478 0.00 0.00 37.52 3.24
96 97 5.084519 TGTGTGTCTACAGGTTAGATCCTT 58.915 41.667 0.00 0.00 37.52 3.36
97 98 5.185249 TGTGTGTCTACAGGTTAGATCCTTC 59.815 44.000 0.00 0.00 37.52 3.46
98 99 4.710375 TGTGTCTACAGGTTAGATCCTTCC 59.290 45.833 0.00 0.00 35.37 3.46
99 100 4.710375 GTGTCTACAGGTTAGATCCTTCCA 59.290 45.833 0.00 0.00 35.37 3.53
100 101 5.187186 GTGTCTACAGGTTAGATCCTTCCAA 59.813 44.000 0.00 0.00 35.37 3.53
101 102 5.964477 TGTCTACAGGTTAGATCCTTCCAAT 59.036 40.000 0.00 0.00 35.37 3.16
105 106 5.256474 ACAGGTTAGATCCTTCCAATTGTG 58.744 41.667 4.43 0.00 35.37 3.33
126 127 6.588204 TGTGTACTACAACAAGATTTGTCCT 58.412 36.000 0.00 0.00 44.59 3.85
127 128 7.051623 TGTGTACTACAACAAGATTTGTCCTT 58.948 34.615 0.00 0.00 44.59 3.36
128 129 7.225931 TGTGTACTACAACAAGATTTGTCCTTC 59.774 37.037 0.00 0.00 44.59 3.46
129 130 7.441458 GTGTACTACAACAAGATTTGTCCTTCT 59.559 37.037 0.00 0.00 44.59 2.85
132 133 3.815401 ACAACAAGATTTGTCCTTCTCCG 59.185 43.478 0.00 0.00 44.59 4.63
146 147 2.040442 TCCGATGAAGGAGGGGCA 59.960 61.111 0.00 0.00 34.92 5.36
151 152 1.202855 CGATGAAGGAGGGGCAATGAT 60.203 52.381 0.00 0.00 0.00 2.45
154 155 0.259938 GAAGGAGGGGCAATGATGGT 59.740 55.000 0.00 0.00 0.00 3.55
161 162 2.202650 GCAATGATGGTGCCGTGC 60.203 61.111 0.00 0.00 35.91 5.34
200 201 0.806868 TTGTAGTCGTCGCTAGGTGG 59.193 55.000 0.00 0.00 0.00 4.61
201 202 0.321919 TGTAGTCGTCGCTAGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
212 213 4.692625 GTCGCTAGGTGGTCTACGAATATA 59.307 45.833 0.00 0.00 35.22 0.86
266 271 4.828939 ACCGCCATGATGTTTGATGAATAT 59.171 37.500 0.00 0.00 0.00 1.28
269 274 7.148188 ACCGCCATGATGTTTGATGAATATATC 60.148 37.037 0.00 0.00 0.00 1.63
283 288 9.627123 TGATGAATATATCGAAAGTTTTTCCCT 57.373 29.630 0.00 0.00 0.00 4.20
285 290 9.627123 ATGAATATATCGAAAGTTTTTCCCTCA 57.373 29.630 0.00 0.00 0.00 3.86
391 396 7.276878 GCACCTGCTAGTTTTTGTTTTTCTTTA 59.723 33.333 0.00 0.00 38.21 1.85
392 397 8.807581 CACCTGCTAGTTTTTGTTTTTCTTTAG 58.192 33.333 0.00 0.00 0.00 1.85
395 400 8.068892 TGCTAGTTTTTGTTTTTCTTTAGGGA 57.931 30.769 0.00 0.00 0.00 4.20
396 401 7.977293 TGCTAGTTTTTGTTTTTCTTTAGGGAC 59.023 33.333 0.00 0.00 0.00 4.46
397 402 7.977293 GCTAGTTTTTGTTTTTCTTTAGGGACA 59.023 33.333 0.00 0.00 0.00 4.02
398 403 9.297586 CTAGTTTTTGTTTTTCTTTAGGGACAC 57.702 33.333 0.00 0.00 0.00 3.67
462 934 0.817634 TGACCAACTTCCACTTGGCG 60.818 55.000 0.00 0.00 41.85 5.69
465 937 1.576421 CAACTTCCACTTGGCGCTC 59.424 57.895 7.64 0.00 34.44 5.03
548 1026 1.393539 GCACACATAGTACACGCAAGG 59.606 52.381 0.00 0.00 46.39 3.61
667 1150 2.582498 CGGCTTAAGTCGCCCTCG 60.582 66.667 17.57 0.20 44.73 4.63
668 1151 2.202892 GGCTTAAGTCGCCCTCGG 60.203 66.667 4.02 0.00 41.73 4.63
740 2956 1.209898 CATCGGCGCAAAGAAGCAA 59.790 52.632 10.83 0.00 34.54 3.91
754 2978 1.755393 AAGCAACGACGACCCTCCTT 61.755 55.000 0.00 0.00 0.00 3.36
777 3001 1.710013 TTGTCGTCTGAGCGGAAATC 58.290 50.000 0.00 0.00 0.00 2.17
812 3036 3.701664 GGATGAATCCAAACCTCCTTGT 58.298 45.455 4.38 0.00 46.38 3.16
813 3037 4.089361 GGATGAATCCAAACCTCCTTGTT 58.911 43.478 4.38 0.00 46.38 2.83
814 3038 4.082026 GGATGAATCCAAACCTCCTTGTTG 60.082 45.833 4.38 0.00 46.38 3.33
815 3039 2.627699 TGAATCCAAACCTCCTTGTTGC 59.372 45.455 0.00 0.00 0.00 4.17
816 3040 2.380064 ATCCAAACCTCCTTGTTGCA 57.620 45.000 0.00 0.00 0.00 4.08
866 3096 1.165270 CCCGAAACAACACAGGGATC 58.835 55.000 0.00 0.00 44.70 3.36
883 3113 2.692041 GGATCAATCCAAAGCTCCTTGG 59.308 50.000 10.48 10.48 46.38 3.61
919 3149 2.189784 GCCCTCTTTCGCCTACCC 59.810 66.667 0.00 0.00 0.00 3.69
1035 3282 3.299340 TTGTACTTCTTGCTCCTCGTC 57.701 47.619 0.00 0.00 0.00 4.20
1331 3579 1.268133 CGCACTCTTCTACTACCTCGC 60.268 57.143 0.00 0.00 0.00 5.03
1398 3664 5.605534 CTCAACGGAGGTTAGAATGATCAT 58.394 41.667 1.18 1.18 37.51 2.45
1463 4620 3.193691 GCTAGATATACGCATCCACAGGT 59.806 47.826 0.00 0.00 0.00 4.00
1481 4638 0.107945 GTCCAGGATGCTCTTCGCTT 60.108 55.000 0.00 0.00 40.11 4.68
1543 4700 3.354397 CTGAAGACAACAAAACGCTCAC 58.646 45.455 0.00 0.00 0.00 3.51
1559 4716 0.865111 TCACCAGAAACATGAACGCG 59.135 50.000 3.53 3.53 0.00 6.01
1573 4730 1.489881 AACGCGTGGAACAACGGTAC 61.490 55.000 14.98 0.00 44.16 3.34
1590 4755 1.117150 TACGTACCCATGGCTTCCTC 58.883 55.000 6.09 0.00 0.00 3.71
1591 4756 0.617820 ACGTACCCATGGCTTCCTCT 60.618 55.000 6.09 0.00 0.00 3.69
1592 4757 0.541863 CGTACCCATGGCTTCCTCTT 59.458 55.000 6.09 0.00 0.00 2.85
1594 4759 2.618045 CGTACCCATGGCTTCCTCTTTT 60.618 50.000 6.09 0.00 0.00 2.27
1595 4760 1.928868 ACCCATGGCTTCCTCTTTTG 58.071 50.000 6.09 0.00 0.00 2.44
1597 4762 0.533951 CCATGGCTTCCTCTTTTGCC 59.466 55.000 0.00 0.00 45.10 4.52
1598 4763 1.553706 CATGGCTTCCTCTTTTGCCT 58.446 50.000 0.00 0.00 45.11 4.75
1599 4764 1.897802 CATGGCTTCCTCTTTTGCCTT 59.102 47.619 0.00 0.00 45.11 4.35
1600 4765 2.086610 TGGCTTCCTCTTTTGCCTTT 57.913 45.000 0.00 0.00 45.11 3.11
1601 4766 1.688197 TGGCTTCCTCTTTTGCCTTTG 59.312 47.619 0.00 0.00 45.11 2.77
1602 4767 1.001293 GGCTTCCTCTTTTGCCTTTGG 59.999 52.381 0.00 0.00 41.92 3.28
1603 4768 1.001293 GCTTCCTCTTTTGCCTTTGGG 59.999 52.381 0.00 0.00 0.00 4.12
1615 4780 2.276732 CCTTTGGGCTCAGTTTCAGA 57.723 50.000 0.00 0.00 0.00 3.27
1616 4781 2.586425 CCTTTGGGCTCAGTTTCAGAA 58.414 47.619 0.00 0.00 0.00 3.02
1617 4782 2.958355 CCTTTGGGCTCAGTTTCAGAAA 59.042 45.455 0.00 0.00 0.00 2.52
1618 4783 3.384467 CCTTTGGGCTCAGTTTCAGAAAA 59.616 43.478 0.00 0.00 0.00 2.29
1619 4784 4.141959 CCTTTGGGCTCAGTTTCAGAAAAA 60.142 41.667 0.00 0.00 0.00 1.94
1620 4785 5.453762 CCTTTGGGCTCAGTTTCAGAAAAAT 60.454 40.000 0.00 0.00 0.00 1.82
1621 4786 5.612725 TTGGGCTCAGTTTCAGAAAAATT 57.387 34.783 0.00 0.00 0.00 1.82
1622 4787 5.612725 TGGGCTCAGTTTCAGAAAAATTT 57.387 34.783 0.00 0.00 0.00 1.82
1623 4788 6.723298 TGGGCTCAGTTTCAGAAAAATTTA 57.277 33.333 0.00 0.00 0.00 1.40
1624 4789 7.118496 TGGGCTCAGTTTCAGAAAAATTTAA 57.882 32.000 0.00 0.00 0.00 1.52
1625 4790 7.209475 TGGGCTCAGTTTCAGAAAAATTTAAG 58.791 34.615 0.00 0.00 0.00 1.85
1626 4791 6.146184 GGGCTCAGTTTCAGAAAAATTTAAGC 59.854 38.462 0.00 2.02 0.00 3.09
1627 4792 6.701400 GGCTCAGTTTCAGAAAAATTTAAGCA 59.299 34.615 0.00 0.00 28.86 3.91
1628 4793 7.386025 GGCTCAGTTTCAGAAAAATTTAAGCAT 59.614 33.333 0.00 0.00 28.86 3.79
1629 4794 8.430828 GCTCAGTTTCAGAAAAATTTAAGCATC 58.569 33.333 0.00 0.00 0.00 3.91
1630 4795 9.467258 CTCAGTTTCAGAAAAATTTAAGCATCA 57.533 29.630 0.00 0.00 0.00 3.07
1631 4796 9.248291 TCAGTTTCAGAAAAATTTAAGCATCAC 57.752 29.630 0.00 0.00 0.00 3.06
1632 4797 8.490355 CAGTTTCAGAAAAATTTAAGCATCACC 58.510 33.333 0.00 0.00 0.00 4.02
1633 4798 7.382218 AGTTTCAGAAAAATTTAAGCATCACCG 59.618 33.333 0.00 0.00 0.00 4.94
1634 4799 6.567687 TCAGAAAAATTTAAGCATCACCGA 57.432 33.333 0.00 0.00 0.00 4.69
1635 4800 6.976088 TCAGAAAAATTTAAGCATCACCGAA 58.024 32.000 0.00 0.00 0.00 4.30
1636 4801 7.429633 TCAGAAAAATTTAAGCATCACCGAAA 58.570 30.769 0.00 0.00 0.00 3.46
1637 4802 8.087750 TCAGAAAAATTTAAGCATCACCGAAAT 58.912 29.630 0.00 0.00 0.00 2.17
1638 4803 8.711457 CAGAAAAATTTAAGCATCACCGAAATT 58.289 29.630 0.00 0.00 32.50 1.82
1639 4804 8.925700 AGAAAAATTTAAGCATCACCGAAATTC 58.074 29.630 0.00 0.00 30.48 2.17
1640 4805 8.600449 AAAAATTTAAGCATCACCGAAATTCA 57.400 26.923 0.00 0.00 30.48 2.57
1641 4806 7.816945 AAATTTAAGCATCACCGAAATTCAG 57.183 32.000 0.00 0.00 30.48 3.02
1642 4807 5.957842 TTTAAGCATCACCGAAATTCAGT 57.042 34.783 0.00 0.00 0.00 3.41
1643 4808 3.837213 AAGCATCACCGAAATTCAGTG 57.163 42.857 3.07 3.07 0.00 3.66
1644 4809 3.057969 AGCATCACCGAAATTCAGTGA 57.942 42.857 13.62 13.62 44.11 3.41
1645 4810 3.411446 AGCATCACCGAAATTCAGTGAA 58.589 40.909 15.00 8.27 43.29 3.18
1646 4811 4.012374 AGCATCACCGAAATTCAGTGAAT 58.988 39.130 15.00 12.75 43.29 2.57
1647 4812 4.460382 AGCATCACCGAAATTCAGTGAATT 59.540 37.500 22.70 22.70 43.29 2.17
1648 4813 4.795278 GCATCACCGAAATTCAGTGAATTC 59.205 41.667 27.07 19.39 43.29 2.17
1649 4814 4.661993 TCACCGAAATTCAGTGAATTCG 57.338 40.909 27.07 26.65 40.77 3.34
1650 4815 3.435327 TCACCGAAATTCAGTGAATTCGG 59.565 43.478 36.14 36.14 45.86 4.30
1651 4816 3.408634 ACCGAAATTCAGTGAATTCGGT 58.591 40.909 36.91 36.91 46.84 4.69
1652 4817 4.419522 CCGAAATTCAGTGAATTCGGTT 57.580 40.909 33.39 21.74 40.77 4.44
1653 4818 4.794169 CCGAAATTCAGTGAATTCGGTTT 58.206 39.130 33.39 21.93 40.77 3.27
1654 4819 4.616802 CCGAAATTCAGTGAATTCGGTTTG 59.383 41.667 33.39 22.74 40.77 2.93
1655 4820 4.088496 CGAAATTCAGTGAATTCGGTTTGC 59.912 41.667 27.07 7.00 40.77 3.68
1656 4821 4.582701 AATTCAGTGAATTCGGTTTGCA 57.417 36.364 22.70 0.00 37.68 4.08
1657 4822 4.789012 ATTCAGTGAATTCGGTTTGCAT 57.211 36.364 12.75 0.00 0.00 3.96
1658 4823 4.582701 TTCAGTGAATTCGGTTTGCATT 57.417 36.364 0.08 0.00 0.00 3.56
1659 4824 4.582701 TCAGTGAATTCGGTTTGCATTT 57.417 36.364 0.04 0.00 0.00 2.32
1660 4825 4.545610 TCAGTGAATTCGGTTTGCATTTC 58.454 39.130 0.04 0.00 0.00 2.17
1661 4826 4.037327 TCAGTGAATTCGGTTTGCATTTCA 59.963 37.500 0.04 0.00 0.00 2.69
1662 4827 4.383649 CAGTGAATTCGGTTTGCATTTCAG 59.616 41.667 0.04 0.00 0.00 3.02
1663 4828 3.121778 GTGAATTCGGTTTGCATTTCAGC 59.878 43.478 0.04 0.00 0.00 4.26
1664 4829 2.368655 ATTCGGTTTGCATTTCAGCC 57.631 45.000 0.00 0.00 0.00 4.85
1665 4830 1.035923 TTCGGTTTGCATTTCAGCCA 58.964 45.000 0.00 0.00 0.00 4.75
1666 4831 1.035923 TCGGTTTGCATTTCAGCCAA 58.964 45.000 0.00 0.00 0.00 4.52
1667 4832 1.410517 TCGGTTTGCATTTCAGCCAAA 59.589 42.857 0.00 0.00 0.00 3.28
1668 4833 2.159043 TCGGTTTGCATTTCAGCCAAAA 60.159 40.909 0.00 0.00 0.00 2.44
1669 4834 2.221517 CGGTTTGCATTTCAGCCAAAAG 59.778 45.455 0.00 0.00 0.00 2.27
1670 4835 3.205338 GGTTTGCATTTCAGCCAAAAGT 58.795 40.909 0.00 0.00 0.00 2.66
1671 4836 3.248363 GGTTTGCATTTCAGCCAAAAGTC 59.752 43.478 0.00 0.00 0.00 3.01
1672 4837 2.818130 TGCATTTCAGCCAAAAGTCC 57.182 45.000 0.00 0.00 0.00 3.85
1673 4838 1.000385 TGCATTTCAGCCAAAAGTCCG 60.000 47.619 0.00 0.00 0.00 4.79
1674 4839 1.269448 GCATTTCAGCCAAAAGTCCGA 59.731 47.619 0.00 0.00 0.00 4.55
1675 4840 2.288152 GCATTTCAGCCAAAAGTCCGAA 60.288 45.455 0.00 0.00 0.00 4.30
1676 4841 3.798548 GCATTTCAGCCAAAAGTCCGAAA 60.799 43.478 0.00 0.00 0.00 3.46
1677 4842 4.559153 CATTTCAGCCAAAAGTCCGAAAT 58.441 39.130 0.00 0.00 34.34 2.17
1678 4843 5.708948 CATTTCAGCCAAAAGTCCGAAATA 58.291 37.500 0.00 0.00 32.77 1.40
1679 4844 5.975693 TTTCAGCCAAAAGTCCGAAATAT 57.024 34.783 0.00 0.00 0.00 1.28
1680 4845 5.975693 TTCAGCCAAAAGTCCGAAATATT 57.024 34.783 0.00 0.00 0.00 1.28
1681 4846 5.560966 TCAGCCAAAAGTCCGAAATATTC 57.439 39.130 0.00 0.00 0.00 1.75
1682 4847 5.007034 TCAGCCAAAAGTCCGAAATATTCA 58.993 37.500 0.00 0.00 0.00 2.57
1683 4848 5.652014 TCAGCCAAAAGTCCGAAATATTCAT 59.348 36.000 0.00 0.00 0.00 2.57
1684 4849 6.152661 TCAGCCAAAAGTCCGAAATATTCATT 59.847 34.615 0.00 0.00 0.00 2.57
1685 4850 6.813152 CAGCCAAAAGTCCGAAATATTCATTT 59.187 34.615 0.00 0.00 37.06 2.32
1686 4851 6.813152 AGCCAAAAGTCCGAAATATTCATTTG 59.187 34.615 0.00 0.00 34.44 2.32
1687 4852 6.811170 GCCAAAAGTCCGAAATATTCATTTGA 59.189 34.615 0.00 0.00 34.44 2.69
1688 4853 7.330700 GCCAAAAGTCCGAAATATTCATTTGAA 59.669 33.333 0.00 0.00 34.44 2.69
1689 4854 9.369904 CCAAAAGTCCGAAATATTCATTTGAAT 57.630 29.630 10.42 10.42 45.77 2.57
1694 4859 9.573133 AGTCCGAAATATTCATTTGAATTTGAC 57.427 29.630 10.81 7.24 41.64 3.18
1695 4860 8.807581 GTCCGAAATATTCATTTGAATTTGACC 58.192 33.333 10.81 0.00 41.64 4.02
1696 4861 8.526978 TCCGAAATATTCATTTGAATTTGACCA 58.473 29.630 10.81 0.00 41.64 4.02
1697 4862 9.149225 CCGAAATATTCATTTGAATTTGACCAA 57.851 29.630 10.81 0.00 41.64 3.67
1704 4869 9.953697 ATTCATTTGAATTTGACCAAACATTTG 57.046 25.926 0.00 0.00 41.64 2.32
1705 4870 8.728337 TCATTTGAATTTGACCAAACATTTGA 57.272 26.923 5.91 0.00 40.55 2.69
1706 4871 9.170734 TCATTTGAATTTGACCAAACATTTGAA 57.829 25.926 5.91 0.00 40.55 2.69
1707 4872 9.784680 CATTTGAATTTGACCAAACATTTGAAA 57.215 25.926 5.91 0.00 40.55 2.69
1765 4930 9.520204 TTCCTATGTACTACGTACTAAAATTGC 57.480 33.333 5.83 0.00 39.49 3.56
1766 4931 8.906867 TCCTATGTACTACGTACTAAAATTGCT 58.093 33.333 5.83 0.00 39.49 3.91
1767 4932 9.178427 CCTATGTACTACGTACTAAAATTGCTC 57.822 37.037 5.83 0.00 39.49 4.26
1768 4933 9.726232 CTATGTACTACGTACTAAAATTGCTCA 57.274 33.333 5.83 0.00 39.49 4.26
1769 4934 8.991243 ATGTACTACGTACTAAAATTGCTCAA 57.009 30.769 5.83 0.00 39.49 3.02
1770 4935 8.815141 TGTACTACGTACTAAAATTGCTCAAA 57.185 30.769 5.83 0.00 39.49 2.69
1771 4936 9.426837 TGTACTACGTACTAAAATTGCTCAAAT 57.573 29.630 5.83 0.00 39.49 2.32
1777 4942 9.485591 ACGTACTAAAATTGCTCAAATATTTCG 57.514 29.630 0.00 0.00 0.00 3.46
1778 4943 8.943925 CGTACTAAAATTGCTCAAATATTTCGG 58.056 33.333 0.00 0.00 0.00 4.30
1780 4945 6.756542 ACTAAAATTGCTCAAATATTTCGGCC 59.243 34.615 15.16 0.00 0.00 6.13
1781 4946 2.842208 TTGCTCAAATATTTCGGCCG 57.158 45.000 22.12 22.12 0.00 6.13
1783 4948 2.360844 TGCTCAAATATTTCGGCCGAA 58.639 42.857 35.81 35.81 0.00 4.30
1825 4990 9.111613 TGCCCATTGAAATTAATGAAATTCATC 57.888 29.630 9.11 0.00 39.79 2.92
1826 4991 8.277713 GCCCATTGAAATTAATGAAATTCATCG 58.722 33.333 9.11 0.00 39.79 3.84
1838 5003 6.499234 TGAAATTCATCGAAATCTTGCTGA 57.501 33.333 0.00 0.00 0.00 4.26
1840 5005 7.369607 TGAAATTCATCGAAATCTTGCTGAAA 58.630 30.769 0.00 0.00 0.00 2.69
1842 5007 5.947228 TTCATCGAAATCTTGCTGAAAGT 57.053 34.783 0.00 0.00 37.18 2.66
1843 5008 5.287170 TCATCGAAATCTTGCTGAAAGTG 57.713 39.130 0.00 0.00 37.18 3.16
1846 5011 5.749596 TCGAAATCTTGCTGAAAGTGAAA 57.250 34.783 0.00 0.00 37.18 2.69
1848 5013 6.738114 TCGAAATCTTGCTGAAAGTGAAAAT 58.262 32.000 0.00 0.00 37.18 1.82
1849 5014 6.857964 TCGAAATCTTGCTGAAAGTGAAAATC 59.142 34.615 0.00 0.00 37.18 2.17
1850 5015 6.638063 CGAAATCTTGCTGAAAGTGAAAATCA 59.362 34.615 0.00 0.00 37.18 2.57
1851 5016 7.167968 CGAAATCTTGCTGAAAGTGAAAATCAA 59.832 33.333 0.00 0.00 37.18 2.57
1852 5017 8.897872 AAATCTTGCTGAAAGTGAAAATCAAT 57.102 26.923 0.00 0.00 37.18 2.57
1854 5019 8.976986 ATCTTGCTGAAAGTGAAAATCAATAC 57.023 30.769 0.00 0.00 37.18 1.89
1855 5020 7.939782 TCTTGCTGAAAGTGAAAATCAATACA 58.060 30.769 0.00 0.00 37.18 2.29
1856 5021 8.077991 TCTTGCTGAAAGTGAAAATCAATACAG 58.922 33.333 0.00 9.10 37.18 2.74
1857 5022 7.509141 TGCTGAAAGTGAAAATCAATACAGA 57.491 32.000 14.32 0.00 33.96 3.41
1858 5023 7.362662 TGCTGAAAGTGAAAATCAATACAGAC 58.637 34.615 14.32 8.96 33.96 3.51
2048 5213 1.600638 GTTCCCGGAGTACAAGGGG 59.399 63.158 16.91 12.91 45.13 4.79
2209 5455 7.169308 TCGACAACACAAGACTAATTTCTTCTC 59.831 37.037 0.00 0.00 33.31 2.87
2347 5601 0.685097 AGGTGTACGCCAATGTCACT 59.315 50.000 26.75 0.75 0.00 3.41
2578 5912 9.896645 AACTATAGTGATCATGTTCTGAATTGT 57.103 29.630 6.06 1.47 37.44 2.71
2660 6002 2.641321 CCTGGGCCTATCTCAATGATCA 59.359 50.000 4.53 0.00 36.65 2.92
2722 6513 0.908198 ACCCTGCAAGTGAGATCCTC 59.092 55.000 0.00 0.00 0.00 3.71
2723 6514 0.179089 CCCTGCAAGTGAGATCCTCG 60.179 60.000 0.00 0.00 32.35 4.63
2748 6542 8.547894 CGAACTTGCAGCTAATATGTACATTTA 58.452 33.333 14.77 11.02 0.00 1.40
2768 6648 1.407258 ACCATTTTCACCCAACACGTG 59.593 47.619 15.48 15.48 0.00 4.49
2772 6652 4.920112 TCACCCAACACGTGCGGG 62.920 66.667 32.07 32.07 46.22 6.13
2784 6668 1.148157 CGTGCGGGACTCATGTGATC 61.148 60.000 0.94 0.00 0.00 2.92
2792 6677 3.630769 GGGACTCATGTGATCTGTACGTA 59.369 47.826 0.94 0.00 0.00 3.57
2859 6744 2.017049 GACCCTGAAATGGTTGATCGG 58.983 52.381 0.00 0.00 33.82 4.18
2865 6750 2.749076 TGAAATGGTTGATCGGAAGCAG 59.251 45.455 4.31 0.00 36.80 4.24
2896 6781 8.098286 CCGGTTTGGATATTCAGGTAACATATA 58.902 37.037 0.00 0.00 42.00 0.86
3011 6993 5.086104 TGAACTTCCCTACATTCTACAGC 57.914 43.478 0.00 0.00 0.00 4.40
3014 6996 0.750850 TCCCTACATTCTACAGCGGC 59.249 55.000 0.00 0.00 0.00 6.53
3026 7008 0.096976 ACAGCGGCGATTTTGATTCG 59.903 50.000 12.98 0.00 39.55 3.34
3113 7095 1.881925 CGTCCATGGACAGCAAAGGAA 60.882 52.381 37.42 1.26 44.77 3.36
3123 7105 4.767409 GGACAGCAAAGGAAGAGGTAAATT 59.233 41.667 0.00 0.00 0.00 1.82
3268 7269 2.614969 TGAGGGGAGCTGGCCATT 60.615 61.111 5.51 0.00 0.00 3.16
3383 7384 5.297527 TCATATGCCAAGACAATTGCTACTG 59.702 40.000 5.05 0.68 0.00 2.74
3412 7413 3.809832 GCTACGCATGACAATGGAGTTAT 59.190 43.478 0.00 0.00 34.09 1.89
3440 7465 2.959507 ATGGGCGGTTTATTTGCTTC 57.040 45.000 0.00 0.00 0.00 3.86
3672 8842 7.878127 CCCGCAGAGATTTTATTCTATAAGGAA 59.122 37.037 0.00 0.00 0.00 3.36
3732 8902 2.346803 TGTTCAGAAGACGGCTTATGC 58.653 47.619 20.89 8.47 41.82 3.14
3745 8921 1.952296 GCTTATGCAGTCTTGGATGGG 59.048 52.381 0.00 0.00 35.96 4.00
3770 8948 9.819267 GGCATACCCTCATACTATTTTAGTATC 57.181 37.037 4.58 0.00 46.22 2.24
3792 8970 6.494893 TCTTTTCTTGAATTGATACGTGGG 57.505 37.500 0.00 0.00 0.00 4.61
3806 8984 1.000717 ACGTGGGCAATACAGCAAAAC 60.001 47.619 0.00 0.00 35.83 2.43
3819 8997 2.353269 CAGCAAAACGACCAACACTACA 59.647 45.455 0.00 0.00 0.00 2.74
3854 9032 2.885135 TGTGGAAGCTCATCAATGGT 57.115 45.000 0.00 0.00 0.00 3.55
3859 9037 0.322816 AAGCTCATCAATGGTGCGGT 60.323 50.000 0.00 0.00 34.59 5.68
3873 9051 1.355210 GCGGTGGCATTTGTATCCG 59.645 57.895 6.13 6.13 39.62 4.18
3889 9067 1.153168 CCGCCACTGGTAATCTGGG 60.153 63.158 0.00 0.00 0.00 4.45
3896 9074 3.308117 CCACTGGTAATCTGGGCACTAAA 60.308 47.826 0.00 0.00 0.00 1.85
3908 9086 2.033602 ACTAAACAGTGGCGGGCC 59.966 61.111 1.86 1.86 0.00 5.80
3919 9097 2.044352 GCGGGCCCATGTAGGTTT 60.044 61.111 24.92 0.00 34.66 3.27
3953 9132 8.752254 CCGTTTCCTCATTTAGTTTTCTTTTTC 58.248 33.333 0.00 0.00 0.00 2.29
3977 9156 9.677567 TTCCTTTTCTCTTTTATCAAATTCGTG 57.322 29.630 0.00 0.00 0.00 4.35
3978 9157 9.062524 TCCTTTTCTCTTTTATCAAATTCGTGA 57.937 29.630 0.00 0.00 0.00 4.35
3979 9158 9.677567 CCTTTTCTCTTTTATCAAATTCGTGAA 57.322 29.630 0.00 0.00 0.00 3.18
3981 9160 9.458374 TTTTCTCTTTTATCAAATTCGTGAACC 57.542 29.630 0.00 0.00 0.00 3.62
3982 9161 7.979444 TCTCTTTTATCAAATTCGTGAACCT 57.021 32.000 0.00 0.00 0.00 3.50
3983 9162 8.391075 TCTCTTTTATCAAATTCGTGAACCTT 57.609 30.769 0.00 0.00 0.00 3.50
3984 9163 8.846211 TCTCTTTTATCAAATTCGTGAACCTTT 58.154 29.630 0.00 0.00 0.00 3.11
3985 9164 9.463443 CTCTTTTATCAAATTCGTGAACCTTTT 57.537 29.630 0.00 0.00 0.00 2.27
3986 9165 9.810545 TCTTTTATCAAATTCGTGAACCTTTTT 57.189 25.926 0.00 0.00 0.00 1.94
4039 9218 9.965824 AAATCGATGAACTTTACTCAAATTTGT 57.034 25.926 17.47 2.40 0.00 2.83
4040 9219 8.955061 ATCGATGAACTTTACTCAAATTTGTG 57.045 30.769 17.47 17.02 0.00 3.33
4041 9220 8.148807 TCGATGAACTTTACTCAAATTTGTGA 57.851 30.769 23.24 3.62 0.00 3.58
4042 9221 8.783093 TCGATGAACTTTACTCAAATTTGTGAT 58.217 29.630 23.24 11.98 0.00 3.06
4043 9222 9.398170 CGATGAACTTTACTCAAATTTGTGATT 57.602 29.630 23.24 7.69 0.00 2.57
4124 9303 4.473477 TTTTTCCCAAATTCGTGGTTGT 57.527 36.364 0.00 0.00 36.90 3.32
4125 9304 4.473477 TTTTCCCAAATTCGTGGTTGTT 57.527 36.364 0.00 0.00 36.90 2.83
4126 9305 4.473477 TTTCCCAAATTCGTGGTTGTTT 57.527 36.364 0.00 0.00 36.90 2.83
4127 9306 4.473477 TTCCCAAATTCGTGGTTGTTTT 57.527 36.364 0.00 0.00 36.90 2.43
4128 9307 4.473477 TCCCAAATTCGTGGTTGTTTTT 57.527 36.364 0.00 0.00 36.90 1.94
4129 9308 4.434520 TCCCAAATTCGTGGTTGTTTTTC 58.565 39.130 0.00 0.00 36.90 2.29
4130 9309 4.081642 TCCCAAATTCGTGGTTGTTTTTCA 60.082 37.500 0.00 0.00 36.90 2.69
4131 9310 4.813697 CCCAAATTCGTGGTTGTTTTTCAT 59.186 37.500 0.00 0.00 36.90 2.57
4132 9311 5.295540 CCCAAATTCGTGGTTGTTTTTCATT 59.704 36.000 0.00 0.00 36.90 2.57
4133 9312 6.183360 CCCAAATTCGTGGTTGTTTTTCATTT 60.183 34.615 0.00 0.00 36.90 2.32
4134 9313 7.247019 CCAAATTCGTGGTTGTTTTTCATTTT 58.753 30.769 0.00 0.00 33.63 1.82
4135 9314 7.752686 CCAAATTCGTGGTTGTTTTTCATTTTT 59.247 29.630 0.00 0.00 33.63 1.94
4136 9315 8.573801 CAAATTCGTGGTTGTTTTTCATTTTTG 58.426 29.630 0.00 0.00 0.00 2.44
4137 9316 6.787085 TTCGTGGTTGTTTTTCATTTTTGT 57.213 29.167 0.00 0.00 0.00 2.83
4138 9317 6.158175 TCGTGGTTGTTTTTCATTTTTGTG 57.842 33.333 0.00 0.00 0.00 3.33
4139 9318 5.926542 TCGTGGTTGTTTTTCATTTTTGTGA 59.073 32.000 0.00 0.00 0.00 3.58
4140 9319 6.423905 TCGTGGTTGTTTTTCATTTTTGTGAA 59.576 30.769 0.00 0.00 36.38 3.18
4141 9320 6.518054 CGTGGTTGTTTTTCATTTTTGTGAAC 59.482 34.615 0.00 0.00 37.80 3.18
4142 9321 7.570324 CGTGGTTGTTTTTCATTTTTGTGAACT 60.570 33.333 0.00 0.00 37.80 3.01
4143 9322 8.073167 GTGGTTGTTTTTCATTTTTGTGAACTT 58.927 29.630 0.00 0.00 37.80 2.66
4144 9323 8.624776 TGGTTGTTTTTCATTTTTGTGAACTTT 58.375 25.926 0.00 0.00 37.80 2.66
4145 9324 9.457110 GGTTGTTTTTCATTTTTGTGAACTTTT 57.543 25.926 0.00 0.00 37.80 2.27
4148 9327 9.670719 TGTTTTTCATTTTTGTGAACTTTTTCC 57.329 25.926 0.00 0.00 37.80 3.13
4149 9328 9.670719 GTTTTTCATTTTTGTGAACTTTTTCCA 57.329 25.926 0.00 0.00 37.80 3.53
4156 9335 9.980780 ATTTTTGTGAACTTTTTCCAAATTACG 57.019 25.926 0.00 0.00 34.56 3.18
4157 9336 8.758633 TTTTGTGAACTTTTTCCAAATTACGA 57.241 26.923 0.00 0.00 34.56 3.43
4158 9337 8.758633 TTTGTGAACTTTTTCCAAATTACGAA 57.241 26.923 0.00 0.00 31.97 3.85
4159 9338 7.743520 TGTGAACTTTTTCCAAATTACGAAC 57.256 32.000 0.00 0.00 0.00 3.95
4160 9339 7.540299 TGTGAACTTTTTCCAAATTACGAACT 58.460 30.769 0.00 0.00 0.00 3.01
4161 9340 8.030106 TGTGAACTTTTTCCAAATTACGAACTT 58.970 29.630 0.00 0.00 0.00 2.66
4162 9341 8.865978 GTGAACTTTTTCCAAATTACGAACTTT 58.134 29.630 0.00 0.00 0.00 2.66
4163 9342 9.078753 TGAACTTTTTCCAAATTACGAACTTTC 57.921 29.630 0.00 0.00 0.00 2.62
4164 9343 7.997107 ACTTTTTCCAAATTACGAACTTTCC 57.003 32.000 0.00 0.00 0.00 3.13
4165 9344 7.548967 ACTTTTTCCAAATTACGAACTTTCCA 58.451 30.769 0.00 0.00 0.00 3.53
4166 9345 8.035984 ACTTTTTCCAAATTACGAACTTTCCAA 58.964 29.630 0.00 0.00 0.00 3.53
4167 9346 7.995463 TTTTCCAAATTACGAACTTTCCAAG 57.005 32.000 0.00 0.00 0.00 3.61
4168 9347 6.702716 TTCCAAATTACGAACTTTCCAAGT 57.297 33.333 0.00 0.00 45.46 3.16
4169 9348 6.067263 TCCAAATTACGAACTTTCCAAGTG 57.933 37.500 0.00 0.00 41.91 3.16
4170 9349 5.591067 TCCAAATTACGAACTTTCCAAGTGT 59.409 36.000 0.00 0.00 41.91 3.55
4171 9350 6.095720 TCCAAATTACGAACTTTCCAAGTGTT 59.904 34.615 0.00 0.00 41.91 3.32
4172 9351 6.198216 CCAAATTACGAACTTTCCAAGTGTTG 59.802 38.462 0.00 0.00 41.91 3.33
4173 9352 6.687081 AATTACGAACTTTCCAAGTGTTGA 57.313 33.333 0.00 0.00 41.91 3.18
4174 9353 6.687081 ATTACGAACTTTCCAAGTGTTGAA 57.313 33.333 0.00 0.00 41.91 2.69
4175 9354 4.351131 ACGAACTTTCCAAGTGTTGAAC 57.649 40.909 0.00 0.00 41.91 3.18
4176 9355 4.007659 ACGAACTTTCCAAGTGTTGAACT 58.992 39.130 0.00 0.00 41.91 3.01
4190 9369 7.294676 AGTGTTGAACTTTTCTCAAATTTGC 57.705 32.000 13.54 0.00 34.57 3.68
4191 9370 6.873076 AGTGTTGAACTTTTCTCAAATTTGCA 59.127 30.769 13.54 0.00 34.57 4.08
4192 9371 7.387397 AGTGTTGAACTTTTCTCAAATTTGCAA 59.613 29.630 13.54 0.00 34.57 4.08
4193 9372 8.014517 GTGTTGAACTTTTCTCAAATTTGCAAA 58.985 29.630 15.44 15.44 34.68 3.68
4194 9373 8.562892 TGTTGAACTTTTCTCAAATTTGCAAAA 58.437 25.926 17.19 16.98 34.68 2.44
4195 9374 9.392021 GTTGAACTTTTCTCAAATTTGCAAAAA 57.608 25.926 17.19 19.95 34.68 1.94
4213 9392 9.491675 TTGCAAAAATATGAAATGTCATGAACT 57.508 25.926 8.76 0.00 44.49 3.01
4214 9393 9.491675 TGCAAAAATATGAAATGTCATGAACTT 57.508 25.926 8.76 0.00 44.49 2.66
4278 9457 8.879427 TTTATTTTTCAAAAACCTTTTCCCCA 57.121 26.923 0.00 0.00 0.00 4.96
4279 9458 9.480861 TTTATTTTTCAAAAACCTTTTCCCCAT 57.519 25.926 0.00 0.00 0.00 4.00
4280 9459 7.969690 ATTTTTCAAAAACCTTTTCCCCATT 57.030 28.000 0.00 0.00 0.00 3.16
4281 9460 7.782897 TTTTTCAAAAACCTTTTCCCCATTT 57.217 28.000 0.00 0.00 0.00 2.32
4282 9461 7.782897 TTTTCAAAAACCTTTTCCCCATTTT 57.217 28.000 0.00 0.00 0.00 1.82
4283 9462 7.782897 TTTCAAAAACCTTTTCCCCATTTTT 57.217 28.000 0.00 0.00 33.81 1.94
4308 9487 9.712305 TTTAATTTTTGGAAAAGTCAACACTCA 57.288 25.926 0.00 0.00 29.93 3.41
4309 9488 9.712305 TTAATTTTTGGAAAAGTCAACACTCAA 57.288 25.926 0.00 0.00 29.93 3.02
4310 9489 7.595311 ATTTTTGGAAAAGTCAACACTCAAC 57.405 32.000 0.00 0.00 29.93 3.18
4311 9490 5.975693 TTTGGAAAAGTCAACACTCAACT 57.024 34.783 0.00 0.00 29.93 3.16
4312 9491 5.560966 TTGGAAAAGTCAACACTCAACTC 57.439 39.130 0.00 0.00 29.93 3.01
4313 9492 4.843728 TGGAAAAGTCAACACTCAACTCT 58.156 39.130 0.00 0.00 29.93 3.24
4314 9493 4.876107 TGGAAAAGTCAACACTCAACTCTC 59.124 41.667 0.00 0.00 29.93 3.20
4315 9494 4.025647 GGAAAAGTCAACACTCAACTCTCG 60.026 45.833 0.00 0.00 29.93 4.04
4316 9495 4.386867 AAAGTCAACACTCAACTCTCGA 57.613 40.909 0.00 0.00 29.93 4.04
4317 9496 4.592485 AAGTCAACACTCAACTCTCGAT 57.408 40.909 0.00 0.00 29.93 3.59
4318 9497 3.906998 AGTCAACACTCAACTCTCGATG 58.093 45.455 0.00 0.00 0.00 3.84
4319 9498 2.989840 GTCAACACTCAACTCTCGATGG 59.010 50.000 0.00 0.00 0.00 3.51
4320 9499 2.628178 TCAACACTCAACTCTCGATGGT 59.372 45.455 0.00 0.00 0.00 3.55
4321 9500 2.989840 CAACACTCAACTCTCGATGGTC 59.010 50.000 0.00 0.00 0.00 4.02
4322 9501 2.239400 ACACTCAACTCTCGATGGTCA 58.761 47.619 0.00 0.00 0.00 4.02
4323 9502 2.628178 ACACTCAACTCTCGATGGTCAA 59.372 45.455 0.00 0.00 0.00 3.18
4324 9503 2.989840 CACTCAACTCTCGATGGTCAAC 59.010 50.000 0.00 0.00 0.00 3.18
4325 9504 2.254459 CTCAACTCTCGATGGTCAACG 58.746 52.381 0.00 0.00 0.00 4.10
4326 9505 1.067846 TCAACTCTCGATGGTCAACGG 60.068 52.381 1.12 0.00 0.00 4.44
4327 9506 0.966920 AACTCTCGATGGTCAACGGT 59.033 50.000 1.12 0.00 0.00 4.83
4328 9507 0.966920 ACTCTCGATGGTCAACGGTT 59.033 50.000 1.12 0.00 0.00 4.44
4329 9508 1.336887 ACTCTCGATGGTCAACGGTTG 60.337 52.381 14.62 14.62 0.00 3.77
4330 9509 0.669318 TCTCGATGGTCAACGGTTGC 60.669 55.000 15.89 10.71 0.00 4.17
4331 9510 0.948623 CTCGATGGTCAACGGTTGCA 60.949 55.000 15.89 9.53 0.00 4.08
4332 9511 0.948623 TCGATGGTCAACGGTTGCAG 60.949 55.000 15.89 3.92 0.00 4.41
4333 9512 1.875963 GATGGTCAACGGTTGCAGG 59.124 57.895 15.89 0.00 0.00 4.85
4334 9513 0.889186 GATGGTCAACGGTTGCAGGT 60.889 55.000 15.89 2.57 0.00 4.00
4335 9514 0.889186 ATGGTCAACGGTTGCAGGTC 60.889 55.000 15.89 4.38 0.00 3.85
4336 9515 1.227853 GGTCAACGGTTGCAGGTCT 60.228 57.895 15.89 0.00 0.00 3.85
4337 9516 0.034337 GGTCAACGGTTGCAGGTCTA 59.966 55.000 15.89 0.00 0.00 2.59
4338 9517 1.145803 GTCAACGGTTGCAGGTCTAC 58.854 55.000 15.89 3.65 0.00 2.59
4339 9518 0.034337 TCAACGGTTGCAGGTCTACC 59.966 55.000 15.89 0.00 37.25 3.18
4340 9519 0.953960 CAACGGTTGCAGGTCTACCC 60.954 60.000 8.09 0.00 37.30 3.69
4342 9521 1.125711 ACGGTTGCAGGTCTACCCTT 61.126 55.000 0.00 0.00 42.73 3.95
4343 9522 0.036306 CGGTTGCAGGTCTACCCTTT 59.964 55.000 0.00 0.00 42.73 3.11
4344 9523 1.276989 CGGTTGCAGGTCTACCCTTTA 59.723 52.381 0.00 0.00 42.73 1.85
4345 9524 2.289819 CGGTTGCAGGTCTACCCTTTAA 60.290 50.000 0.00 0.00 42.73 1.52
4346 9525 3.079578 GGTTGCAGGTCTACCCTTTAAC 58.920 50.000 0.00 0.00 42.73 2.01
4347 9526 3.079578 GTTGCAGGTCTACCCTTTAACC 58.920 50.000 0.00 0.00 42.73 2.85
4348 9527 2.627933 TGCAGGTCTACCCTTTAACCT 58.372 47.619 0.00 0.00 42.73 3.50
4349 9528 3.793712 TGCAGGTCTACCCTTTAACCTA 58.206 45.455 0.00 0.00 42.73 3.08
4350 9529 4.368067 TGCAGGTCTACCCTTTAACCTAT 58.632 43.478 0.00 0.00 42.73 2.57
4351 9530 4.786454 TGCAGGTCTACCCTTTAACCTATT 59.214 41.667 0.00 0.00 42.73 1.73
4352 9531 5.252164 TGCAGGTCTACCCTTTAACCTATTT 59.748 40.000 0.00 0.00 42.73 1.40
4353 9532 6.444493 TGCAGGTCTACCCTTTAACCTATTTA 59.556 38.462 0.00 0.00 42.73 1.40
4354 9533 7.037442 TGCAGGTCTACCCTTTAACCTATTTAA 60.037 37.037 0.00 0.00 42.73 1.52
4355 9534 7.498239 GCAGGTCTACCCTTTAACCTATTTAAG 59.502 40.741 0.00 0.00 42.73 1.85
4356 9535 8.765517 CAGGTCTACCCTTTAACCTATTTAAGA 58.234 37.037 0.00 0.00 42.73 2.10
4357 9536 9.342736 AGGTCTACCCTTTAACCTATTTAAGAA 57.657 33.333 0.00 0.00 42.73 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.142182 ACCGACCAAATCCAGCAAAATATG 60.142 41.667 0.00 0.00 0.00 1.78
1 2 4.023291 ACCGACCAAATCCAGCAAAATAT 58.977 39.130 0.00 0.00 0.00 1.28
3 4 2.029110 CACCGACCAAATCCAGCAAAAT 60.029 45.455 0.00 0.00 0.00 1.82
4 5 1.339610 CACCGACCAAATCCAGCAAAA 59.660 47.619 0.00 0.00 0.00 2.44
5 6 0.958091 CACCGACCAAATCCAGCAAA 59.042 50.000 0.00 0.00 0.00 3.68
6 7 0.179004 ACACCGACCAAATCCAGCAA 60.179 50.000 0.00 0.00 0.00 3.91
7 8 0.179004 AACACCGACCAAATCCAGCA 60.179 50.000 0.00 0.00 0.00 4.41
8 9 0.958822 AAACACCGACCAAATCCAGC 59.041 50.000 0.00 0.00 0.00 4.85
9 10 4.261801 AGATAAACACCGACCAAATCCAG 58.738 43.478 0.00 0.00 0.00 3.86
10 11 4.295141 AGATAAACACCGACCAAATCCA 57.705 40.909 0.00 0.00 0.00 3.41
11 12 5.399013 CAAAGATAAACACCGACCAAATCC 58.601 41.667 0.00 0.00 0.00 3.01
12 13 5.048294 ACCAAAGATAAACACCGACCAAATC 60.048 40.000 0.00 0.00 0.00 2.17
13 14 4.830600 ACCAAAGATAAACACCGACCAAAT 59.169 37.500 0.00 0.00 0.00 2.32
14 15 4.036971 CACCAAAGATAAACACCGACCAAA 59.963 41.667 0.00 0.00 0.00 3.28
15 16 3.566322 CACCAAAGATAAACACCGACCAA 59.434 43.478 0.00 0.00 0.00 3.67
16 17 3.142951 CACCAAAGATAAACACCGACCA 58.857 45.455 0.00 0.00 0.00 4.02
17 18 3.404899 TCACCAAAGATAAACACCGACC 58.595 45.455 0.00 0.00 0.00 4.79
18 19 5.411669 AGATTCACCAAAGATAAACACCGAC 59.588 40.000 0.00 0.00 0.00 4.79
19 20 5.411361 CAGATTCACCAAAGATAAACACCGA 59.589 40.000 0.00 0.00 0.00 4.69
20 21 5.631026 CAGATTCACCAAAGATAAACACCG 58.369 41.667 0.00 0.00 0.00 4.94
21 22 5.183904 AGCAGATTCACCAAAGATAAACACC 59.816 40.000 0.00 0.00 0.00 4.16
22 23 6.259550 AGCAGATTCACCAAAGATAAACAC 57.740 37.500 0.00 0.00 0.00 3.32
23 24 6.899393 AAGCAGATTCACCAAAGATAAACA 57.101 33.333 0.00 0.00 0.00 2.83
24 25 8.268850 TCTAAGCAGATTCACCAAAGATAAAC 57.731 34.615 0.00 0.00 0.00 2.01
25 26 9.466497 AATCTAAGCAGATTCACCAAAGATAAA 57.534 29.630 0.00 0.00 46.50 1.40
39 40 6.257411 CGAACAATGACTGAATCTAAGCAGAT 59.743 38.462 0.00 0.00 43.67 2.90
40 41 5.578336 CGAACAATGACTGAATCTAAGCAGA 59.422 40.000 0.00 0.00 36.07 4.26
41 42 5.349817 ACGAACAATGACTGAATCTAAGCAG 59.650 40.000 0.00 0.00 38.10 4.24
42 43 5.237815 ACGAACAATGACTGAATCTAAGCA 58.762 37.500 0.00 0.00 0.00 3.91
43 44 5.578727 AGACGAACAATGACTGAATCTAAGC 59.421 40.000 0.00 0.00 0.00 3.09
44 45 6.454848 GCAGACGAACAATGACTGAATCTAAG 60.455 42.308 0.00 0.00 32.07 2.18
45 46 5.348724 GCAGACGAACAATGACTGAATCTAA 59.651 40.000 0.00 0.00 32.07 2.10
46 47 4.864806 GCAGACGAACAATGACTGAATCTA 59.135 41.667 0.00 0.00 32.07 1.98
47 48 3.681897 GCAGACGAACAATGACTGAATCT 59.318 43.478 0.00 0.00 32.07 2.40
48 49 3.482598 CGCAGACGAACAATGACTGAATC 60.483 47.826 0.00 0.00 43.93 2.52
49 50 2.413112 CGCAGACGAACAATGACTGAAT 59.587 45.455 0.00 0.00 43.93 2.57
50 51 1.792367 CGCAGACGAACAATGACTGAA 59.208 47.619 0.00 0.00 43.93 3.02
51 52 1.269569 ACGCAGACGAACAATGACTGA 60.270 47.619 0.00 0.00 43.93 3.41
52 53 1.139989 ACGCAGACGAACAATGACTG 58.860 50.000 0.00 0.00 43.93 3.51
53 54 1.865865 AACGCAGACGAACAATGACT 58.134 45.000 0.00 0.00 43.93 3.41
54 55 2.286184 ACAAACGCAGACGAACAATGAC 60.286 45.455 0.00 0.00 43.93 3.06
55 56 1.937223 ACAAACGCAGACGAACAATGA 59.063 42.857 0.00 0.00 43.93 2.57
56 57 2.036217 CACAAACGCAGACGAACAATG 58.964 47.619 0.00 0.00 43.93 2.82
57 58 1.668751 ACACAAACGCAGACGAACAAT 59.331 42.857 0.00 0.00 43.93 2.71
58 59 1.080298 ACACAAACGCAGACGAACAA 58.920 45.000 0.00 0.00 43.93 2.83
59 60 0.371989 CACACAAACGCAGACGAACA 59.628 50.000 0.00 0.00 43.93 3.18
60 61 0.372334 ACACACAAACGCAGACGAAC 59.628 50.000 0.00 0.00 43.93 3.95
61 62 0.648441 GACACACAAACGCAGACGAA 59.352 50.000 0.00 0.00 43.93 3.85
62 63 0.179121 AGACACACAAACGCAGACGA 60.179 50.000 0.00 0.00 43.93 4.20
64 65 2.198406 TGTAGACACACAAACGCAGAC 58.802 47.619 0.00 0.00 0.00 3.51
65 66 2.469826 CTGTAGACACACAAACGCAGA 58.530 47.619 0.00 0.00 0.00 4.26
66 67 1.526887 CCTGTAGACACACAAACGCAG 59.473 52.381 0.00 0.00 0.00 5.18
67 68 1.134640 ACCTGTAGACACACAAACGCA 60.135 47.619 0.00 0.00 0.00 5.24
68 69 1.578583 ACCTGTAGACACACAAACGC 58.421 50.000 0.00 0.00 0.00 4.84
69 70 4.613944 TCTAACCTGTAGACACACAAACG 58.386 43.478 0.00 0.00 0.00 3.60
70 71 5.638234 GGATCTAACCTGTAGACACACAAAC 59.362 44.000 0.00 0.00 0.00 2.93
71 72 5.542635 AGGATCTAACCTGTAGACACACAAA 59.457 40.000 0.00 0.00 39.01 2.83
72 73 5.084519 AGGATCTAACCTGTAGACACACAA 58.915 41.667 0.00 0.00 39.01 3.33
73 74 4.673968 AGGATCTAACCTGTAGACACACA 58.326 43.478 0.00 0.00 39.01 3.72
74 75 5.394333 GGAAGGATCTAACCTGTAGACACAC 60.394 48.000 0.00 0.00 40.49 3.82
75 76 4.710375 GGAAGGATCTAACCTGTAGACACA 59.290 45.833 0.00 0.00 40.49 3.72
76 77 4.710375 TGGAAGGATCTAACCTGTAGACAC 59.290 45.833 0.00 0.00 40.49 3.67
77 78 4.942944 TGGAAGGATCTAACCTGTAGACA 58.057 43.478 0.00 0.00 40.49 3.41
78 79 5.934402 TTGGAAGGATCTAACCTGTAGAC 57.066 43.478 0.00 0.00 40.49 2.59
79 80 6.443849 ACAATTGGAAGGATCTAACCTGTAGA 59.556 38.462 10.83 0.00 40.49 2.59
80 81 6.540189 CACAATTGGAAGGATCTAACCTGTAG 59.460 42.308 10.83 0.00 40.49 2.74
81 82 6.012858 ACACAATTGGAAGGATCTAACCTGTA 60.013 38.462 10.83 0.00 40.49 2.74
82 83 5.222130 ACACAATTGGAAGGATCTAACCTGT 60.222 40.000 10.83 0.00 40.49 4.00
83 84 5.256474 ACACAATTGGAAGGATCTAACCTG 58.744 41.667 10.83 0.00 40.49 4.00
84 85 5.520748 ACACAATTGGAAGGATCTAACCT 57.479 39.130 10.83 0.00 42.69 3.50
85 86 6.415573 AGTACACAATTGGAAGGATCTAACC 58.584 40.000 10.83 0.00 0.00 2.85
86 87 8.038944 TGTAGTACACAATTGGAAGGATCTAAC 58.961 37.037 10.83 0.00 32.95 2.34
87 88 8.141298 TGTAGTACACAATTGGAAGGATCTAA 57.859 34.615 10.83 0.00 32.95 2.10
88 89 7.727578 TGTAGTACACAATTGGAAGGATCTA 57.272 36.000 10.83 0.99 32.95 1.98
89 90 6.620877 TGTAGTACACAATTGGAAGGATCT 57.379 37.500 10.83 1.88 32.95 2.75
101 102 7.051623 AGGACAAATCTTGTTGTAGTACACAA 58.948 34.615 1.43 9.71 45.52 3.33
105 106 7.117956 GGAGAAGGACAAATCTTGTTGTAGTAC 59.882 40.741 0.00 0.00 45.52 2.73
129 130 0.988145 ATTGCCCCTCCTTCATCGGA 60.988 55.000 0.00 0.00 0.00 4.55
132 133 2.236766 CATCATTGCCCCTCCTTCATC 58.763 52.381 0.00 0.00 0.00 2.92
146 147 0.899717 AAAGGCACGGCACCATCATT 60.900 50.000 0.00 0.00 0.00 2.57
161 162 2.996631 AGCACTAGAATGAGCCAAAGG 58.003 47.619 0.00 0.00 0.00 3.11
172 173 2.413765 GCGACGACTACAAGCACTAGAA 60.414 50.000 0.00 0.00 0.00 2.10
223 224 6.037830 GGCGGTATAAAGAACAGAAGCAATAA 59.962 38.462 0.00 0.00 0.00 1.40
232 233 4.816385 ACATCATGGCGGTATAAAGAACAG 59.184 41.667 0.00 0.00 0.00 3.16
245 250 6.903479 CGATATATTCATCAAACATCATGGCG 59.097 38.462 0.00 0.00 0.00 5.69
365 370 5.109210 AGAAAAACAAAAACTAGCAGGTGC 58.891 37.500 0.00 0.00 42.49 5.01
381 386 5.847111 AACAGGTGTCCCTAAAGAAAAAC 57.153 39.130 0.00 0.00 39.89 2.43
383 388 6.256643 ACTAACAGGTGTCCCTAAAGAAAA 57.743 37.500 0.00 0.00 39.89 2.29
391 396 3.248024 TGATCAACTAACAGGTGTCCCT 58.752 45.455 0.00 0.00 44.02 4.20
392 397 3.695830 TGATCAACTAACAGGTGTCCC 57.304 47.619 0.00 0.00 33.77 4.46
395 400 6.119536 TGAAGTTTGATCAACTAACAGGTGT 58.880 36.000 7.89 0.00 45.77 4.16
396 401 6.618287 TGAAGTTTGATCAACTAACAGGTG 57.382 37.500 7.89 0.00 45.77 4.00
397 402 6.998074 TCATGAAGTTTGATCAACTAACAGGT 59.002 34.615 7.89 0.00 45.77 4.00
398 403 7.439157 TCATGAAGTTTGATCAACTAACAGG 57.561 36.000 7.89 12.93 45.77 4.00
437 906 0.883833 GTGGAAGTTGGTCATGCAGG 59.116 55.000 0.00 0.00 0.00 4.85
462 934 1.510623 CATTGCGAAGTGTGCGAGC 60.511 57.895 0.00 0.00 34.24 5.03
465 937 0.040514 TTTCCATTGCGAAGTGTGCG 60.041 50.000 0.00 0.00 34.24 5.34
498 970 6.641169 TTATGTGCTTTGGTGACATGTAAA 57.359 33.333 0.00 0.00 42.32 2.01
530 1002 3.733988 CGATCCTTGCGTGTACTATGTGT 60.734 47.826 0.00 0.00 0.00 3.72
548 1026 5.499139 TTGGAAGTTAATCAATGGCGATC 57.501 39.130 0.00 0.00 0.00 3.69
616 1099 2.047274 CTAGTGCGGTGTGTGGGG 60.047 66.667 0.00 0.00 0.00 4.96
667 1150 2.045340 ACATGCGGCCAAGGTACC 60.045 61.111 2.73 2.73 0.00 3.34
668 1151 0.958382 TTGACATGCGGCCAAGGTAC 60.958 55.000 2.24 0.00 0.00 3.34
740 2956 1.827399 AATGCAAGGAGGGTCGTCGT 61.827 55.000 0.00 0.00 0.00 4.34
754 2978 1.737735 CCGCTCAGACGACAATGCA 60.738 57.895 0.00 0.00 34.06 3.96
815 3039 2.409975 CAACAAGGCTTGCAGGATTTG 58.590 47.619 26.45 17.44 0.00 2.32
816 3040 1.270465 GCAACAAGGCTTGCAGGATTT 60.270 47.619 26.45 9.76 45.07 2.17
883 3113 1.071305 GCAGTTTCGTTTGCATTGCAC 60.071 47.619 11.66 0.00 38.71 4.57
912 3142 4.919987 GCGTCGTAGCGGGTAGGC 62.920 72.222 2.24 0.00 0.00 3.93
919 3149 3.166657 GGTTTATATAGGCGTCGTAGCG 58.833 50.000 0.00 0.00 38.18 4.26
1314 3562 1.209019 TCGGCGAGGTAGTAGAAGAGT 59.791 52.381 4.99 0.00 0.00 3.24
1409 3676 8.871862 CAGCCGACAGTATATACTAGTAGTAAG 58.128 40.741 15.03 3.41 33.89 2.34
1430 4583 2.929531 ATATCTAGCGTGATCAGCCG 57.070 50.000 11.89 7.32 34.64 5.52
1493 4650 3.550431 GGGCCGAGCTCCTGCATA 61.550 66.667 20.73 0.00 42.74 3.14
1543 4700 0.110238 CCACGCGTTCATGTTTCTGG 60.110 55.000 10.22 0.00 0.00 3.86
1559 4716 1.418373 GGTACGTACCGTTGTTCCAC 58.582 55.000 28.00 2.35 41.54 4.02
1573 4730 0.541863 AAGAGGAAGCCATGGGTACG 59.458 55.000 18.63 0.00 0.00 3.67
1597 4762 4.654091 TTTTCTGAAACTGAGCCCAAAG 57.346 40.909 1.58 0.00 0.00 2.77
1598 4763 5.612725 ATTTTTCTGAAACTGAGCCCAAA 57.387 34.783 1.58 0.00 0.00 3.28
1599 4764 5.612725 AATTTTTCTGAAACTGAGCCCAA 57.387 34.783 1.58 0.00 0.00 4.12
1600 4765 5.612725 AAATTTTTCTGAAACTGAGCCCA 57.387 34.783 1.58 0.00 0.00 5.36
1601 4766 6.146184 GCTTAAATTTTTCTGAAACTGAGCCC 59.854 38.462 1.58 0.00 0.00 5.19
1602 4767 6.701400 TGCTTAAATTTTTCTGAAACTGAGCC 59.299 34.615 1.58 0.00 0.00 4.70
1603 4768 7.698836 TGCTTAAATTTTTCTGAAACTGAGC 57.301 32.000 1.58 7.51 0.00 4.26
1605 4770 9.248291 GTGATGCTTAAATTTTTCTGAAACTGA 57.752 29.630 1.58 0.00 0.00 3.41
1606 4771 8.490355 GGTGATGCTTAAATTTTTCTGAAACTG 58.510 33.333 1.58 0.00 0.00 3.16
1607 4772 7.382218 CGGTGATGCTTAAATTTTTCTGAAACT 59.618 33.333 1.58 0.00 0.00 2.66
1608 4773 7.381139 TCGGTGATGCTTAAATTTTTCTGAAAC 59.619 33.333 1.58 0.00 0.00 2.78
1609 4774 7.429633 TCGGTGATGCTTAAATTTTTCTGAAA 58.570 30.769 0.00 0.00 0.00 2.69
1610 4775 6.976088 TCGGTGATGCTTAAATTTTTCTGAA 58.024 32.000 0.00 0.00 0.00 3.02
1611 4776 6.567687 TCGGTGATGCTTAAATTTTTCTGA 57.432 33.333 0.00 0.00 0.00 3.27
1612 4777 7.636259 TTTCGGTGATGCTTAAATTTTTCTG 57.364 32.000 0.00 0.00 0.00 3.02
1613 4778 8.831715 AATTTCGGTGATGCTTAAATTTTTCT 57.168 26.923 0.00 0.00 0.00 2.52
1614 4779 8.707839 TGAATTTCGGTGATGCTTAAATTTTTC 58.292 29.630 0.00 0.00 31.70 2.29
1615 4780 8.600449 TGAATTTCGGTGATGCTTAAATTTTT 57.400 26.923 0.00 0.00 31.70 1.94
1616 4781 7.872483 ACTGAATTTCGGTGATGCTTAAATTTT 59.128 29.630 10.08 0.00 34.08 1.82
1617 4782 7.378181 ACTGAATTTCGGTGATGCTTAAATTT 58.622 30.769 10.08 0.00 34.08 1.82
1618 4783 6.924111 ACTGAATTTCGGTGATGCTTAAATT 58.076 32.000 10.08 0.00 34.08 1.82
1619 4784 6.515272 ACTGAATTTCGGTGATGCTTAAAT 57.485 33.333 10.08 0.00 34.08 1.40
1620 4785 5.957842 ACTGAATTTCGGTGATGCTTAAA 57.042 34.783 10.08 0.00 34.08 1.52
1630 4795 3.408634 ACCGAATTCACTGAATTTCGGT 58.591 40.909 30.60 30.60 46.84 4.69
1631 4796 4.419522 AACCGAATTCACTGAATTTCGG 57.580 40.909 29.83 29.83 45.86 4.30
1632 4797 4.088496 GCAAACCGAATTCACTGAATTTCG 59.912 41.667 16.48 18.07 41.56 3.46
1633 4798 4.981674 TGCAAACCGAATTCACTGAATTTC 59.018 37.500 16.48 9.89 41.56 2.17
1634 4799 4.942852 TGCAAACCGAATTCACTGAATTT 58.057 34.783 16.48 0.75 41.56 1.82
1635 4800 4.582701 TGCAAACCGAATTCACTGAATT 57.417 36.364 15.55 15.55 43.77 2.17
1636 4801 4.789012 ATGCAAACCGAATTCACTGAAT 57.211 36.364 6.22 0.00 33.25 2.57
1637 4802 4.582701 AATGCAAACCGAATTCACTGAA 57.417 36.364 6.22 0.00 0.00 3.02
1638 4803 4.037327 TGAAATGCAAACCGAATTCACTGA 59.963 37.500 6.22 0.00 0.00 3.41
1639 4804 4.297510 TGAAATGCAAACCGAATTCACTG 58.702 39.130 6.22 0.00 0.00 3.66
1640 4805 4.549458 CTGAAATGCAAACCGAATTCACT 58.451 39.130 6.22 0.00 0.00 3.41
1641 4806 3.121778 GCTGAAATGCAAACCGAATTCAC 59.878 43.478 6.22 0.00 0.00 3.18
1642 4807 3.316283 GCTGAAATGCAAACCGAATTCA 58.684 40.909 6.22 0.00 0.00 2.57
1643 4808 2.667969 GGCTGAAATGCAAACCGAATTC 59.332 45.455 0.00 0.00 34.04 2.17
1644 4809 2.036992 TGGCTGAAATGCAAACCGAATT 59.963 40.909 0.00 0.00 34.04 2.17
1645 4810 1.617850 TGGCTGAAATGCAAACCGAAT 59.382 42.857 0.00 0.00 34.04 3.34
1646 4811 1.035923 TGGCTGAAATGCAAACCGAA 58.964 45.000 0.00 0.00 34.04 4.30
1647 4812 1.035923 TTGGCTGAAATGCAAACCGA 58.964 45.000 0.00 0.00 34.04 4.69
1648 4813 1.863267 TTTGGCTGAAATGCAAACCG 58.137 45.000 0.00 0.00 34.04 4.44
1649 4814 3.205338 ACTTTTGGCTGAAATGCAAACC 58.795 40.909 0.00 0.00 34.04 3.27
1650 4815 3.248363 GGACTTTTGGCTGAAATGCAAAC 59.752 43.478 0.00 0.00 34.04 2.93
1651 4816 3.465871 GGACTTTTGGCTGAAATGCAAA 58.534 40.909 0.00 0.00 34.04 3.68
1652 4817 2.545532 CGGACTTTTGGCTGAAATGCAA 60.546 45.455 0.00 0.00 35.23 4.08
1653 4818 1.000385 CGGACTTTTGGCTGAAATGCA 60.000 47.619 0.00 0.00 35.23 3.96
1654 4819 1.269448 TCGGACTTTTGGCTGAAATGC 59.731 47.619 0.00 0.00 40.54 3.56
1659 4824 5.007034 TGAATATTTCGGACTTTTGGCTGA 58.993 37.500 0.00 0.00 42.08 4.26
1660 4825 5.309323 TGAATATTTCGGACTTTTGGCTG 57.691 39.130 0.00 0.00 34.30 4.85
1661 4826 6.530019 AATGAATATTTCGGACTTTTGGCT 57.470 33.333 0.00 0.00 0.00 4.75
1662 4827 6.811170 TCAAATGAATATTTCGGACTTTTGGC 59.189 34.615 0.00 0.00 34.34 4.52
1663 4828 8.755696 TTCAAATGAATATTTCGGACTTTTGG 57.244 30.769 0.00 0.00 34.34 3.28
1668 4833 9.573133 GTCAAATTCAAATGAATATTTCGGACT 57.427 29.630 8.94 0.00 43.41 3.85
1669 4834 8.807581 GGTCAAATTCAAATGAATATTTCGGAC 58.192 33.333 8.94 9.73 43.41 4.79
1670 4835 8.526978 TGGTCAAATTCAAATGAATATTTCGGA 58.473 29.630 8.94 0.00 43.41 4.55
1671 4836 8.700722 TGGTCAAATTCAAATGAATATTTCGG 57.299 30.769 8.94 0.00 43.41 4.30
1678 4843 9.953697 CAAATGTTTGGTCAAATTCAAATGAAT 57.046 25.926 2.83 2.83 39.07 2.57
1679 4844 9.170734 TCAAATGTTTGGTCAAATTCAAATGAA 57.829 25.926 5.71 0.00 38.66 2.57
1680 4845 8.728337 TCAAATGTTTGGTCAAATTCAAATGA 57.272 26.923 5.71 1.90 38.66 2.57
1681 4846 9.784680 TTTCAAATGTTTGGTCAAATTCAAATG 57.215 25.926 5.71 0.00 38.66 2.32
1751 4916 9.485591 CGAAATATTTGAGCAATTTTAGTACGT 57.514 29.630 5.17 0.00 0.00 3.57
1752 4917 8.943925 CCGAAATATTTGAGCAATTTTAGTACG 58.056 33.333 5.17 0.00 0.00 3.67
1753 4918 8.743099 GCCGAAATATTTGAGCAATTTTAGTAC 58.257 33.333 5.17 0.00 0.00 2.73
1754 4919 7.918562 GGCCGAAATATTTGAGCAATTTTAGTA 59.081 33.333 16.73 0.00 0.00 1.82
1755 4920 6.756542 GGCCGAAATATTTGAGCAATTTTAGT 59.243 34.615 16.73 0.00 0.00 2.24
1756 4921 6.074888 CGGCCGAAATATTTGAGCAATTTTAG 60.075 38.462 24.07 0.00 0.00 1.85
1757 4922 5.746245 CGGCCGAAATATTTGAGCAATTTTA 59.254 36.000 24.07 0.00 0.00 1.52
1758 4923 4.566360 CGGCCGAAATATTTGAGCAATTTT 59.434 37.500 24.07 0.00 0.00 1.82
1759 4924 4.111916 CGGCCGAAATATTTGAGCAATTT 58.888 39.130 24.07 0.00 0.00 1.82
1760 4925 3.380004 TCGGCCGAAATATTTGAGCAATT 59.620 39.130 28.99 0.00 0.00 2.32
1761 4926 2.948979 TCGGCCGAAATATTTGAGCAAT 59.051 40.909 28.99 0.00 0.00 3.56
1762 4927 2.360844 TCGGCCGAAATATTTGAGCAA 58.639 42.857 28.99 0.00 0.00 3.91
1763 4928 2.031258 TCGGCCGAAATATTTGAGCA 57.969 45.000 28.99 0.00 0.00 4.26
1764 4929 3.363178 CTTTCGGCCGAAATATTTGAGC 58.637 45.455 43.74 7.87 42.34 4.26
1765 4930 3.377172 ACCTTTCGGCCGAAATATTTGAG 59.623 43.478 43.74 32.10 42.34 3.02
1766 4931 3.349022 ACCTTTCGGCCGAAATATTTGA 58.651 40.909 43.74 26.07 42.34 2.69
1767 4932 3.775661 ACCTTTCGGCCGAAATATTTG 57.224 42.857 43.74 32.78 42.34 2.32
1768 4933 5.900865 TTTACCTTTCGGCCGAAATATTT 57.099 34.783 43.74 30.75 42.34 1.40
1769 4934 7.754851 ATATTTACCTTTCGGCCGAAATATT 57.245 32.000 43.74 32.80 42.34 1.28
1770 4935 7.754851 AATATTTACCTTTCGGCCGAAATAT 57.245 32.000 43.74 35.62 42.34 1.28
1771 4936 7.282675 TGAAATATTTACCTTTCGGCCGAAATA 59.717 33.333 43.74 33.27 42.34 1.40
1772 4937 6.095720 TGAAATATTTACCTTTCGGCCGAAAT 59.904 34.615 43.74 34.24 42.34 2.17
1773 4938 5.415077 TGAAATATTTACCTTTCGGCCGAAA 59.585 36.000 41.68 41.68 41.22 3.46
1774 4939 4.942483 TGAAATATTTACCTTTCGGCCGAA 59.058 37.500 35.81 35.81 34.76 4.30
1777 4942 5.462068 GCATTGAAATATTTACCTTTCGGCC 59.538 40.000 0.00 0.00 34.76 6.13
1778 4943 5.462068 GGCATTGAAATATTTACCTTTCGGC 59.538 40.000 0.00 0.00 34.76 5.54
1780 4945 6.568869 TGGGCATTGAAATATTTACCTTTCG 58.431 36.000 0.00 0.00 34.76 3.46
1781 4946 8.962884 AATGGGCATTGAAATATTTACCTTTC 57.037 30.769 0.00 0.00 33.06 2.62
1797 4962 9.463902 TGAATTTCATTAATTTCAATGGGCATT 57.536 25.926 0.00 0.00 36.59 3.56
1798 4963 9.635404 ATGAATTTCATTAATTTCAATGGGCAT 57.365 25.926 6.06 0.00 38.06 4.40
1800 4965 8.277713 CGATGAATTTCATTAATTTCAATGGGC 58.722 33.333 12.96 0.00 37.20 5.36
1813 4978 7.541162 TCAGCAAGATTTCGATGAATTTCATT 58.459 30.769 12.96 0.00 37.20 2.57
1815 4980 6.499234 TCAGCAAGATTTCGATGAATTTCA 57.501 33.333 0.75 0.75 0.00 2.69
1816 4981 7.540055 ACTTTCAGCAAGATTTCGATGAATTTC 59.460 33.333 0.00 0.00 36.21 2.17
1817 4982 7.327761 CACTTTCAGCAAGATTTCGATGAATTT 59.672 33.333 0.00 0.00 36.21 1.82
1819 4984 6.149973 TCACTTTCAGCAAGATTTCGATGAAT 59.850 34.615 0.00 0.00 36.21 2.57
1822 4987 5.287170 TCACTTTCAGCAAGATTTCGATG 57.713 39.130 0.00 0.00 36.21 3.84
1825 4990 6.638063 TGATTTTCACTTTCAGCAAGATTTCG 59.362 34.615 0.00 0.00 36.21 3.46
1826 4991 7.935338 TGATTTTCACTTTCAGCAAGATTTC 57.065 32.000 0.00 0.00 36.21 2.17
1831 4996 8.077991 TCTGTATTGATTTTCACTTTCAGCAAG 58.922 33.333 0.00 0.00 38.64 4.01
1833 4998 7.362662 GTCTGTATTGATTTTCACTTTCAGCA 58.637 34.615 0.00 0.00 0.00 4.41
1834 4999 6.803807 GGTCTGTATTGATTTTCACTTTCAGC 59.196 38.462 0.00 0.00 0.00 4.26
1835 5000 7.175641 AGGGTCTGTATTGATTTTCACTTTCAG 59.824 37.037 0.00 0.00 0.00 3.02
1838 5003 7.004086 TCAGGGTCTGTATTGATTTTCACTTT 58.996 34.615 0.00 0.00 32.61 2.66
1840 5005 6.126863 TCAGGGTCTGTATTGATTTTCACT 57.873 37.500 0.00 0.00 32.61 3.41
1842 5007 6.542821 AGTTCAGGGTCTGTATTGATTTTCA 58.457 36.000 0.00 0.00 32.61 2.69
1843 5008 6.655003 TGAGTTCAGGGTCTGTATTGATTTTC 59.345 38.462 0.00 0.00 32.61 2.29
1846 5011 5.762179 TGAGTTCAGGGTCTGTATTGATT 57.238 39.130 0.00 0.00 32.61 2.57
1848 5013 5.762179 ATTGAGTTCAGGGTCTGTATTGA 57.238 39.130 0.00 0.00 32.61 2.57
1849 5014 6.615088 CAAATTGAGTTCAGGGTCTGTATTG 58.385 40.000 0.00 0.00 32.61 1.90
1850 5015 5.183904 GCAAATTGAGTTCAGGGTCTGTATT 59.816 40.000 0.00 0.00 32.61 1.89
1851 5016 4.702131 GCAAATTGAGTTCAGGGTCTGTAT 59.298 41.667 0.00 0.00 32.61 2.29
1852 5017 4.072131 GCAAATTGAGTTCAGGGTCTGTA 58.928 43.478 0.00 0.00 32.61 2.74
1854 5019 3.152341 AGCAAATTGAGTTCAGGGTCTG 58.848 45.455 0.00 0.00 0.00 3.51
1855 5020 3.515602 AGCAAATTGAGTTCAGGGTCT 57.484 42.857 0.00 0.00 0.00 3.85
1856 5021 3.319122 ACAAGCAAATTGAGTTCAGGGTC 59.681 43.478 0.00 0.00 41.83 4.46
1857 5022 3.068590 CACAAGCAAATTGAGTTCAGGGT 59.931 43.478 0.00 0.00 41.83 4.34
1858 5023 3.318839 TCACAAGCAAATTGAGTTCAGGG 59.681 43.478 0.00 0.00 41.83 4.45
1904 5069 1.144936 GGGCGACTCCAGGAAGATG 59.855 63.158 0.00 0.00 36.21 2.90
2048 5213 1.951631 GGAGATGTAGAAGGCGCGC 60.952 63.158 25.94 25.94 0.00 6.86
2209 5455 1.449418 GAAGACCGTCGTACGTTGTTG 59.551 52.381 16.05 3.56 40.58 3.33
2347 5601 0.315886 TGCCGAAGTCGCAGTTCTTA 59.684 50.000 0.00 0.00 38.18 2.10
2526 5860 6.932400 TCACTTTTGACTGGACACGTAATAAT 59.068 34.615 0.00 0.00 0.00 1.28
2578 5912 7.640852 TGCATGTTCGTTTTACTTTTAGCTAA 58.359 30.769 0.86 0.86 0.00 3.09
2588 5922 1.978782 GCAGCTGCATGTTCGTTTTAC 59.021 47.619 33.36 0.00 41.59 2.01
2591 5925 1.174712 AGGCAGCTGCATGTTCGTTT 61.175 50.000 37.63 10.06 44.36 3.60
2593 5927 2.033141 AGGCAGCTGCATGTTCGT 59.967 55.556 37.63 11.62 44.36 3.85
2594 5928 2.483745 CAGGCAGCTGCATGTTCG 59.516 61.111 37.95 18.49 46.46 3.95
2722 6513 5.966636 TGTACATATTAGCTGCAAGTTCG 57.033 39.130 1.02 0.00 35.30 3.95
2723 6514 9.651718 GTAAATGTACATATTAGCTGCAAGTTC 57.348 33.333 9.21 0.00 35.30 3.01
2748 6542 1.407258 CACGTGTTGGGTGAAAATGGT 59.593 47.619 7.58 0.00 37.60 3.55
2768 6648 0.176680 ACAGATCACATGAGTCCCGC 59.823 55.000 0.00 0.00 0.00 6.13
2772 6652 5.231265 TGTACGTACAGATCACATGAGTC 57.769 43.478 24.10 0.00 0.00 3.36
2784 6668 3.367932 CAGGTTTCTGCATGTACGTACAG 59.632 47.826 30.15 22.40 35.42 2.74
2896 6781 5.650703 TGACGATATATGGTGGTCGTGATAT 59.349 40.000 4.97 0.00 46.07 1.63
2898 6783 3.824443 TGACGATATATGGTGGTCGTGAT 59.176 43.478 4.97 0.00 46.07 3.06
2965 6947 3.133721 TGGGTGGTGAATTTTGAAAGGTG 59.866 43.478 0.00 0.00 0.00 4.00
3011 6993 0.446222 ACACCGAATCAAAATCGCCG 59.554 50.000 0.00 0.00 38.93 6.46
3014 6996 2.774007 GAGCACACCGAATCAAAATCG 58.226 47.619 0.00 0.00 39.92 3.34
3074 7056 1.377725 CCATGGAGTGGTCACAGGC 60.378 63.158 5.56 0.00 43.44 4.85
3113 7095 7.316393 TCGATGATGGGATTAATTTACCTCT 57.684 36.000 0.00 0.00 0.00 3.69
3123 7105 9.348476 TGAATAATGTTTTCGATGATGGGATTA 57.652 29.630 0.00 0.00 0.00 1.75
3268 7269 0.039618 GGCTGGAAGGATGGAACCAA 59.960 55.000 0.00 0.00 31.85 3.67
3412 7413 0.037590 AAACCGCCCATAGCAAGTGA 59.962 50.000 0.00 0.00 44.04 3.41
3535 7565 7.882179 AGCCGTTTTCATTATTTGAAGTTACT 58.118 30.769 0.00 0.00 44.90 2.24
3705 8875 2.094182 GCCGTCTTCTGAACATACTCCA 60.094 50.000 0.00 0.00 0.00 3.86
3706 8876 2.166664 AGCCGTCTTCTGAACATACTCC 59.833 50.000 0.00 0.00 0.00 3.85
3707 8877 3.512033 AGCCGTCTTCTGAACATACTC 57.488 47.619 0.00 0.00 0.00 2.59
3708 8878 3.963428 AAGCCGTCTTCTGAACATACT 57.037 42.857 0.00 0.00 0.00 2.12
3712 8882 2.289382 TGCATAAGCCGTCTTCTGAACA 60.289 45.455 0.00 0.00 41.13 3.18
3714 8884 2.028112 ACTGCATAAGCCGTCTTCTGAA 60.028 45.455 0.00 0.00 41.13 3.02
3732 8902 1.972872 GGTATGCCCATCCAAGACTG 58.027 55.000 0.00 0.00 0.00 3.51
3770 8948 5.095490 GCCCACGTATCAATTCAAGAAAAG 58.905 41.667 0.00 0.00 0.00 2.27
3792 8970 2.697431 TGGTCGTTTTGCTGTATTGC 57.303 45.000 0.00 0.00 0.00 3.56
3806 8984 3.736252 CAGTTTCTCTGTAGTGTTGGTCG 59.264 47.826 0.00 0.00 39.17 4.79
3819 8997 7.398024 AGCTTCCACATATAAACAGTTTCTCT 58.602 34.615 0.48 0.00 0.00 3.10
3829 9007 7.013559 CACCATTGATGAGCTTCCACATATAAA 59.986 37.037 0.00 0.00 0.00 1.40
3873 9051 1.032114 GTGCCCAGATTACCAGTGGC 61.032 60.000 9.78 0.00 39.33 5.01
3928 9106 8.752254 GGAAAAAGAAAACTAAATGAGGAAACG 58.248 33.333 0.00 0.00 0.00 3.60
3953 9132 9.677567 TTCACGAATTTGATAAAAGAGAAAAGG 57.322 29.630 0.00 0.00 0.00 3.11
3958 9137 7.979444 AGGTTCACGAATTTGATAAAAGAGA 57.021 32.000 0.00 0.00 0.00 3.10
3959 9138 9.463443 AAAAGGTTCACGAATTTGATAAAAGAG 57.537 29.630 0.00 0.00 0.00 2.85
3960 9139 9.810545 AAAAAGGTTCACGAATTTGATAAAAGA 57.189 25.926 0.00 0.00 0.00 2.52
4013 9192 9.965824 ACAAATTTGAGTAAAGTTCATCGATTT 57.034 25.926 24.64 0.00 32.32 2.17
4014 9193 9.398170 CACAAATTTGAGTAAAGTTCATCGATT 57.602 29.630 24.64 0.00 32.32 3.34
4015 9194 8.783093 TCACAAATTTGAGTAAAGTTCATCGAT 58.217 29.630 24.64 0.00 32.32 3.59
4016 9195 8.148807 TCACAAATTTGAGTAAAGTTCATCGA 57.851 30.769 24.64 0.00 32.32 3.59
4017 9196 8.955061 ATCACAAATTTGAGTAAAGTTCATCG 57.045 30.769 24.64 0.00 32.32 3.84
4103 9282 4.473477 ACAACCACGAATTTGGGAAAAA 57.527 36.364 0.00 0.00 41.49 1.94
4104 9283 4.473477 AACAACCACGAATTTGGGAAAA 57.527 36.364 0.00 0.00 41.49 2.29
4105 9284 4.473477 AAACAACCACGAATTTGGGAAA 57.527 36.364 0.00 0.00 41.49 3.13
4106 9285 4.473477 AAAACAACCACGAATTTGGGAA 57.527 36.364 0.00 0.00 41.49 3.97
4107 9286 4.081642 TGAAAAACAACCACGAATTTGGGA 60.082 37.500 0.00 0.00 41.49 4.37
4108 9287 4.184629 TGAAAAACAACCACGAATTTGGG 58.815 39.130 1.33 0.00 41.49 4.12
4109 9288 5.982465 ATGAAAAACAACCACGAATTTGG 57.018 34.783 0.00 0.00 43.04 3.28
4110 9289 8.573801 CAAAAATGAAAAACAACCACGAATTTG 58.426 29.630 0.00 0.00 0.00 2.32
4111 9290 8.293157 ACAAAAATGAAAAACAACCACGAATTT 58.707 25.926 0.00 0.00 0.00 1.82
4112 9291 7.748241 CACAAAAATGAAAAACAACCACGAATT 59.252 29.630 0.00 0.00 0.00 2.17
4113 9292 7.118390 TCACAAAAATGAAAAACAACCACGAAT 59.882 29.630 0.00 0.00 0.00 3.34
4114 9293 6.423905 TCACAAAAATGAAAAACAACCACGAA 59.576 30.769 0.00 0.00 0.00 3.85
4115 9294 5.926542 TCACAAAAATGAAAAACAACCACGA 59.073 32.000 0.00 0.00 0.00 4.35
4116 9295 6.158175 TCACAAAAATGAAAAACAACCACG 57.842 33.333 0.00 0.00 0.00 4.94
4117 9296 7.580600 AGTTCACAAAAATGAAAAACAACCAC 58.419 30.769 0.00 0.00 40.22 4.16
4118 9297 7.736447 AGTTCACAAAAATGAAAAACAACCA 57.264 28.000 0.00 0.00 40.22 3.67
4119 9298 9.457110 AAAAGTTCACAAAAATGAAAAACAACC 57.543 25.926 0.00 0.00 40.22 3.77
4122 9301 9.670719 GGAAAAAGTTCACAAAAATGAAAAACA 57.329 25.926 0.00 0.00 40.22 2.83
4123 9302 9.670719 TGGAAAAAGTTCACAAAAATGAAAAAC 57.329 25.926 0.00 0.00 40.22 2.43
4130 9309 9.980780 CGTAATTTGGAAAAAGTTCACAAAAAT 57.019 25.926 0.00 0.00 37.41 1.82
4131 9310 9.204570 TCGTAATTTGGAAAAAGTTCACAAAAA 57.795 25.926 0.00 0.00 37.41 1.94
4132 9311 8.758633 TCGTAATTTGGAAAAAGTTCACAAAA 57.241 26.923 0.00 0.00 37.41 2.44
4133 9312 8.648968 GTTCGTAATTTGGAAAAAGTTCACAAA 58.351 29.630 0.00 0.00 37.83 2.83
4134 9313 8.030106 AGTTCGTAATTTGGAAAAAGTTCACAA 58.970 29.630 0.00 0.00 35.25 3.33
4135 9314 7.540299 AGTTCGTAATTTGGAAAAAGTTCACA 58.460 30.769 0.00 0.00 35.25 3.58
4136 9315 7.980742 AGTTCGTAATTTGGAAAAAGTTCAC 57.019 32.000 0.00 0.00 35.25 3.18
4137 9316 8.989653 AAAGTTCGTAATTTGGAAAAAGTTCA 57.010 26.923 0.00 0.00 35.25 3.18
4138 9317 8.537223 GGAAAGTTCGTAATTTGGAAAAAGTTC 58.463 33.333 0.00 0.00 0.00 3.01
4139 9318 8.035984 TGGAAAGTTCGTAATTTGGAAAAAGTT 58.964 29.630 0.00 0.00 0.00 2.66
4140 9319 7.548967 TGGAAAGTTCGTAATTTGGAAAAAGT 58.451 30.769 0.00 0.00 0.00 2.66
4141 9320 7.995463 TGGAAAGTTCGTAATTTGGAAAAAG 57.005 32.000 0.00 0.00 0.00 2.27
4142 9321 8.413899 CTTGGAAAGTTCGTAATTTGGAAAAA 57.586 30.769 0.00 0.00 39.70 1.94
4143 9322 7.995463 CTTGGAAAGTTCGTAATTTGGAAAA 57.005 32.000 0.00 0.00 39.70 2.29
4158 9337 7.255801 TTGAGAAAAGTTCAACACTTGGAAAGT 60.256 33.333 0.00 0.00 45.77 2.66
4159 9338 7.090173 TTGAGAAAAGTTCAACACTTGGAAAG 58.910 34.615 0.00 0.00 45.77 2.62
4160 9339 6.582677 TGAGAAAAGTTCAACACTTGGAAA 57.417 33.333 0.00 0.00 45.77 3.13
4161 9340 6.582677 TTGAGAAAAGTTCAACACTTGGAA 57.417 33.333 0.00 0.00 45.77 3.53
4162 9341 6.582677 TTTGAGAAAAGTTCAACACTTGGA 57.417 33.333 0.00 0.00 45.77 3.53
4163 9342 7.832503 AATTTGAGAAAAGTTCAACACTTGG 57.167 32.000 0.00 0.00 45.77 3.61
4164 9343 7.689400 GCAAATTTGAGAAAAGTTCAACACTTG 59.311 33.333 22.31 0.00 45.77 3.16
4166 9345 6.873076 TGCAAATTTGAGAAAAGTTCAACACT 59.127 30.769 22.31 0.00 34.50 3.55
4167 9346 7.059448 TGCAAATTTGAGAAAAGTTCAACAC 57.941 32.000 22.31 0.00 34.50 3.32
4168 9347 7.664082 TTGCAAATTTGAGAAAAGTTCAACA 57.336 28.000 22.31 2.53 34.50 3.33
4169 9348 8.947304 TTTTGCAAATTTGAGAAAAGTTCAAC 57.053 26.923 22.31 0.00 34.50 3.18
4187 9366 9.491675 AGTTCATGACATTTCATATTTTTGCAA 57.508 25.926 0.00 0.00 40.79 4.08
4188 9367 9.491675 AAGTTCATGACATTTCATATTTTTGCA 57.508 25.926 0.00 0.00 40.79 4.08
4252 9431 9.309224 TGGGGAAAAGGTTTTTGAAAAATAAAA 57.691 25.926 6.35 0.00 0.00 1.52
4253 9432 8.879427 TGGGGAAAAGGTTTTTGAAAAATAAA 57.121 26.923 6.35 0.00 0.00 1.40
4254 9433 9.480861 AATGGGGAAAAGGTTTTTGAAAAATAA 57.519 25.926 6.35 0.00 0.00 1.40
4255 9434 9.480861 AAATGGGGAAAAGGTTTTTGAAAAATA 57.519 25.926 6.35 0.00 0.00 1.40
4256 9435 7.969690 AATGGGGAAAAGGTTTTTGAAAAAT 57.030 28.000 6.35 0.00 0.00 1.82
4257 9436 7.782897 AAATGGGGAAAAGGTTTTTGAAAAA 57.217 28.000 0.00 0.00 0.00 1.94
4258 9437 7.782897 AAAATGGGGAAAAGGTTTTTGAAAA 57.217 28.000 0.00 0.00 0.00 2.29
4259 9438 7.782897 AAAAATGGGGAAAAGGTTTTTGAAA 57.217 28.000 0.00 0.00 0.00 2.69
4282 9461 9.712305 TGAGTGTTGACTTTTCCAAAAATTAAA 57.288 25.926 0.00 0.00 30.16 1.52
4283 9462 9.712305 TTGAGTGTTGACTTTTCCAAAAATTAA 57.288 25.926 0.00 0.00 30.16 1.40
4284 9463 9.145865 GTTGAGTGTTGACTTTTCCAAAAATTA 57.854 29.630 0.00 0.00 30.16 1.40
4285 9464 7.877612 AGTTGAGTGTTGACTTTTCCAAAAATT 59.122 29.630 0.00 0.00 30.16 1.82
4286 9465 7.386059 AGTTGAGTGTTGACTTTTCCAAAAAT 58.614 30.769 0.00 0.00 30.16 1.82
4287 9466 6.754193 AGTTGAGTGTTGACTTTTCCAAAAA 58.246 32.000 0.00 0.00 30.16 1.94
4288 9467 6.208599 AGAGTTGAGTGTTGACTTTTCCAAAA 59.791 34.615 0.00 0.00 30.16 2.44
4289 9468 5.710099 AGAGTTGAGTGTTGACTTTTCCAAA 59.290 36.000 0.00 0.00 30.16 3.28
4290 9469 5.253330 AGAGTTGAGTGTTGACTTTTCCAA 58.747 37.500 0.00 0.00 30.16 3.53
4291 9470 4.843728 AGAGTTGAGTGTTGACTTTTCCA 58.156 39.130 0.00 0.00 30.16 3.53
4292 9471 4.025647 CGAGAGTTGAGTGTTGACTTTTCC 60.026 45.833 0.00 0.00 30.16 3.13
4293 9472 4.804139 TCGAGAGTTGAGTGTTGACTTTTC 59.196 41.667 0.00 0.00 30.16 2.29
4294 9473 4.755411 TCGAGAGTTGAGTGTTGACTTTT 58.245 39.130 0.00 0.00 30.16 2.27
4295 9474 4.386867 TCGAGAGTTGAGTGTTGACTTT 57.613 40.909 0.00 0.00 30.16 2.66
4296 9475 4.302455 CATCGAGAGTTGAGTGTTGACTT 58.698 43.478 0.00 0.00 32.62 3.01
4297 9476 3.305676 CCATCGAGAGTTGAGTGTTGACT 60.306 47.826 0.00 0.00 32.62 3.41
4298 9477 2.989840 CCATCGAGAGTTGAGTGTTGAC 59.010 50.000 0.00 0.00 32.62 3.18
4299 9478 2.628178 ACCATCGAGAGTTGAGTGTTGA 59.372 45.455 0.00 0.00 32.62 3.18
4300 9479 2.989840 GACCATCGAGAGTTGAGTGTTG 59.010 50.000 0.00 0.00 32.62 3.33
4301 9480 2.628178 TGACCATCGAGAGTTGAGTGTT 59.372 45.455 0.00 0.00 32.62 3.32
4302 9481 2.239400 TGACCATCGAGAGTTGAGTGT 58.761 47.619 0.00 0.00 32.62 3.55
4303 9482 2.989840 GTTGACCATCGAGAGTTGAGTG 59.010 50.000 0.00 0.00 32.62 3.51
4304 9483 2.351835 CGTTGACCATCGAGAGTTGAGT 60.352 50.000 0.00 0.00 32.62 3.41
4305 9484 2.254459 CGTTGACCATCGAGAGTTGAG 58.746 52.381 0.00 0.00 32.62 3.02
4306 9485 1.067846 CCGTTGACCATCGAGAGTTGA 60.068 52.381 0.00 0.00 32.62 3.18
4307 9486 1.336887 ACCGTTGACCATCGAGAGTTG 60.337 52.381 0.00 0.00 0.00 3.16
4308 9487 0.966920 ACCGTTGACCATCGAGAGTT 59.033 50.000 0.00 0.00 0.00 3.01
4309 9488 0.966920 AACCGTTGACCATCGAGAGT 59.033 50.000 0.00 0.00 0.00 3.24
4310 9489 1.350193 CAACCGTTGACCATCGAGAG 58.650 55.000 5.23 0.00 0.00 3.20
4311 9490 0.669318 GCAACCGTTGACCATCGAGA 60.669 55.000 15.63 0.00 0.00 4.04
4312 9491 0.948623 TGCAACCGTTGACCATCGAG 60.949 55.000 15.63 0.00 0.00 4.04
4313 9492 0.948623 CTGCAACCGTTGACCATCGA 60.949 55.000 15.63 0.00 0.00 3.59
4314 9493 1.497278 CTGCAACCGTTGACCATCG 59.503 57.895 15.63 0.00 0.00 3.84
4315 9494 0.889186 ACCTGCAACCGTTGACCATC 60.889 55.000 15.63 0.00 0.00 3.51
4316 9495 0.889186 GACCTGCAACCGTTGACCAT 60.889 55.000 15.63 0.00 0.00 3.55
4317 9496 1.525077 GACCTGCAACCGTTGACCA 60.525 57.895 15.63 3.64 0.00 4.02
4318 9497 0.034337 TAGACCTGCAACCGTTGACC 59.966 55.000 15.63 0.00 0.00 4.02
4319 9498 1.145803 GTAGACCTGCAACCGTTGAC 58.854 55.000 15.63 7.04 0.00 3.18
4320 9499 0.034337 GGTAGACCTGCAACCGTTGA 59.966 55.000 15.63 0.00 0.00 3.18
4321 9500 0.953960 GGGTAGACCTGCAACCGTTG 60.954 60.000 6.91 6.91 33.89 4.10
4322 9501 1.373812 GGGTAGACCTGCAACCGTT 59.626 57.895 0.00 0.00 33.89 4.44
4323 9502 3.066198 GGGTAGACCTGCAACCGT 58.934 61.111 0.00 0.00 33.89 4.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.