Multiple sequence alignment - TraesCS5B01G240000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G240000 chr5B 100.000 3095 0 0 1 3095 420179070 420182164 0.000000e+00 5716.0
1 TraesCS5B01G240000 chr5B 84.601 1039 146 11 1036 2065 420922649 420921616 0.000000e+00 1020.0
2 TraesCS5B01G240000 chr5B 90.698 172 15 1 211 382 262365381 262365551 8.630000e-56 228.0
3 TraesCS5B01G240000 chr5B 77.197 421 74 17 2635 3052 420732467 420732868 3.110000e-55 226.0
4 TraesCS5B01G240000 chr5B 75.980 408 83 10 2645 3051 419727975 419727582 2.430000e-46 196.0
5 TraesCS5B01G240000 chr5B 85.792 183 23 3 210 390 671350593 671350774 1.130000e-44 191.0
6 TraesCS5B01G240000 chr5B 87.879 165 13 6 53 211 35428613 35428450 1.470000e-43 187.0
7 TraesCS5B01G240000 chr5B 88.889 45 4 1 372 415 41992712 41992668 2.000000e-03 54.7
8 TraesCS5B01G240000 chr5A 95.696 2207 84 7 898 3095 457720372 457718168 0.000000e+00 3539.0
9 TraesCS5B01G240000 chr5A 84.000 1025 145 14 1042 2054 457797423 457798440 0.000000e+00 966.0
10 TraesCS5B01G240000 chr5A 96.875 352 0 1 540 891 325992330 325991990 2.070000e-161 579.0
11 TraesCS5B01G240000 chr5A 76.887 424 76 16 2635 3055 457512086 457511682 1.440000e-53 220.0
12 TraesCS5B01G240000 chr5A 76.585 410 77 14 2645 3051 457086812 457086419 1.120000e-49 207.0
13 TraesCS5B01G240000 chr5A 88.554 166 14 4 52 213 699319373 699319537 2.430000e-46 196.0
14 TraesCS5B01G240000 chr5A 93.750 48 1 1 494 541 457720417 457720372 1.540000e-08 71.3
15 TraesCS5B01G240000 chr5D 94.816 1196 57 2 895 2085 355455554 355456749 0.000000e+00 1860.0
16 TraesCS5B01G240000 chr5D 95.703 1024 37 4 2076 3095 355460883 355461903 0.000000e+00 1640.0
17 TraesCS5B01G240000 chr5D 84.421 1027 147 10 1036 2054 356120329 356121350 0.000000e+00 998.0
18 TraesCS5B01G240000 chr5D 93.252 163 10 1 212 374 478215987 478215826 3.990000e-59 239.0
19 TraesCS5B01G240000 chr5D 76.499 417 76 16 2635 3048 355797310 355797707 1.120000e-49 207.0
20 TraesCS5B01G240000 chr5D 91.892 111 9 0 431 541 355455447 355455557 4.130000e-34 156.0
21 TraesCS5B01G240000 chr5D 73.741 278 62 9 1173 1446 354941451 354941721 7.060000e-17 99.0
22 TraesCS5B01G240000 chr2D 84.467 985 144 6 1062 2039 496356224 496355242 0.000000e+00 963.0
23 TraesCS5B01G240000 chr2D 94.986 359 15 2 542 897 364981446 364981804 7.500000e-156 560.0
24 TraesCS5B01G240000 chr2D 94.618 353 19 0 538 890 194675237 194675589 5.840000e-152 547.0
25 TraesCS5B01G240000 chr2D 88.108 185 20 2 203 386 56540986 56541169 5.200000e-53 219.0
26 TraesCS5B01G240000 chr4A 82.702 977 149 6 1056 2022 460459799 460460765 0.000000e+00 850.0
27 TraesCS5B01G240000 chr2B 81.917 1012 174 7 1056 2059 583525314 583524304 0.000000e+00 846.0
28 TraesCS5B01G240000 chr2B 99.438 356 2 0 538 893 410503022 410502667 0.000000e+00 647.0
29 TraesCS5B01G240000 chr2B 97.746 355 4 2 540 894 478906828 478906478 2.640000e-170 608.0
30 TraesCS5B01G240000 chr2B 92.683 164 11 1 211 374 373508692 373508854 5.160000e-58 235.0
31 TraesCS5B01G240000 chr2B 90.960 177 13 2 211 387 478189800 478189627 5.160000e-58 235.0
32 TraesCS5B01G240000 chr2B 87.978 183 18 3 192 374 659017229 659017051 2.420000e-51 213.0
33 TraesCS5B01G240000 chr2B 86.188 181 24 1 212 392 755622443 755622264 8.760000e-46 195.0
34 TraesCS5B01G240000 chr4D 81.986 977 156 9 1056 2022 116132254 116131288 0.000000e+00 811.0
35 TraesCS5B01G240000 chr4D 87.006 177 20 3 212 386 44169158 44169333 2.430000e-46 196.0
36 TraesCS5B01G240000 chr4B 80.948 1013 167 10 1056 2055 177224252 177223253 0.000000e+00 778.0
37 TraesCS5B01G240000 chr6A 80.881 931 140 22 2192 3094 16443436 16444356 0.000000e+00 699.0
38 TraesCS5B01G240000 chr6A 99.718 355 1 0 540 894 498326204 498326558 0.000000e+00 651.0
39 TraesCS5B01G240000 chr6A 90.986 355 25 7 540 889 614200654 614200302 3.610000e-129 472.0
40 TraesCS5B01G240000 chr6B 80.301 929 143 25 2192 3094 28064392 28063478 0.000000e+00 665.0
41 TraesCS5B01G240000 chr6B 80.215 930 143 25 2192 3094 27903083 27903998 0.000000e+00 660.0
42 TraesCS5B01G240000 chr6B 86.982 169 15 5 51 213 4953244 4953077 1.900000e-42 183.0
43 TraesCS5B01G240000 chr6B 86.982 169 15 5 51 213 4975626 4975459 1.900000e-42 183.0
44 TraesCS5B01G240000 chr7A 89.773 352 14 5 540 891 77471594 77471923 6.130000e-117 431.0
45 TraesCS5B01G240000 chr7A 92.500 40 3 0 372 411 91532857 91532818 1.200000e-04 58.4
46 TraesCS5B01G240000 chr7D 80.878 319 50 11 77 390 111479014 111478702 1.110000e-59 241.0
47 TraesCS5B01G240000 chr7D 91.279 172 13 2 212 382 485098440 485098270 1.860000e-57 233.0
48 TraesCS5B01G240000 chr7D 75.075 333 51 23 2725 3052 125888217 125887912 3.240000e-25 126.0
49 TraesCS5B01G240000 chr3D 93.252 163 10 1 212 374 507038742 507038581 3.990000e-59 239.0
50 TraesCS5B01G240000 chr1B 85.644 202 25 4 203 404 681454540 681454737 3.130000e-50 209.0
51 TraesCS5B01G240000 chr6D 87.640 178 20 2 212 389 311580695 311580520 4.050000e-49 206.0
52 TraesCS5B01G240000 chr6D 86.813 182 22 2 194 375 422936582 422936403 5.230000e-48 202.0
53 TraesCS5B01G240000 chr3B 89.441 161 13 4 55 213 775348551 775348709 1.880000e-47 200.0
54 TraesCS5B01G240000 chr3B 85.795 176 23 2 212 387 183601247 183601074 5.270000e-43 185.0
55 TraesCS5B01G240000 chr7B 87.059 170 15 6 53 216 481536660 481536492 5.270000e-43 185.0
56 TraesCS5B01G240000 chr3A 87.425 167 14 5 53 213 554608085 554607920 5.270000e-43 185.0
57 TraesCS5B01G240000 chr2A 87.730 163 15 5 52 210 100915931 100916092 5.270000e-43 185.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G240000 chr5B 420179070 420182164 3094 False 5716.00 5716 100.000 1 3095 1 chr5B.!!$F2 3094
1 TraesCS5B01G240000 chr5B 420921616 420922649 1033 True 1020.00 1020 84.601 1036 2065 1 chr5B.!!$R4 1029
2 TraesCS5B01G240000 chr5A 457718168 457720417 2249 True 1805.15 3539 94.723 494 3095 2 chr5A.!!$R4 2601
3 TraesCS5B01G240000 chr5A 457797423 457798440 1017 False 966.00 966 84.000 1042 2054 1 chr5A.!!$F1 1012
4 TraesCS5B01G240000 chr5D 355460883 355461903 1020 False 1640.00 1640 95.703 2076 3095 1 chr5D.!!$F2 1019
5 TraesCS5B01G240000 chr5D 355455447 355456749 1302 False 1008.00 1860 93.354 431 2085 2 chr5D.!!$F5 1654
6 TraesCS5B01G240000 chr5D 356120329 356121350 1021 False 998.00 998 84.421 1036 2054 1 chr5D.!!$F4 1018
7 TraesCS5B01G240000 chr2D 496355242 496356224 982 True 963.00 963 84.467 1062 2039 1 chr2D.!!$R1 977
8 TraesCS5B01G240000 chr4A 460459799 460460765 966 False 850.00 850 82.702 1056 2022 1 chr4A.!!$F1 966
9 TraesCS5B01G240000 chr2B 583524304 583525314 1010 True 846.00 846 81.917 1056 2059 1 chr2B.!!$R4 1003
10 TraesCS5B01G240000 chr4D 116131288 116132254 966 True 811.00 811 81.986 1056 2022 1 chr4D.!!$R1 966
11 TraesCS5B01G240000 chr4B 177223253 177224252 999 True 778.00 778 80.948 1056 2055 1 chr4B.!!$R1 999
12 TraesCS5B01G240000 chr6A 16443436 16444356 920 False 699.00 699 80.881 2192 3094 1 chr6A.!!$F1 902
13 TraesCS5B01G240000 chr6B 28063478 28064392 914 True 665.00 665 80.301 2192 3094 1 chr6B.!!$R3 902
14 TraesCS5B01G240000 chr6B 27903083 27903998 915 False 660.00 660 80.215 2192 3094 1 chr6B.!!$F1 902

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
803 806 0.036732 TTTGGGTCTGCAGGCAGTAG 59.963 55.0 21.89 0.0 43.96 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2241 2290 1.078848 GCAAGCCGGAGTGTGATCT 60.079 57.895 5.05 0.0 0.0 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.801380 GTTAGGGTGACATGGTTAAGAAGA 58.199 41.667 0.00 0.00 0.00 2.87
24 25 4.993705 AGGGTGACATGGTTAAGAAGAA 57.006 40.909 0.00 0.00 0.00 2.52
25 26 5.319043 AGGGTGACATGGTTAAGAAGAAA 57.681 39.130 0.00 0.00 0.00 2.52
26 27 5.316987 AGGGTGACATGGTTAAGAAGAAAG 58.683 41.667 0.00 0.00 0.00 2.62
27 28 5.070685 GGGTGACATGGTTAAGAAGAAAGT 58.929 41.667 0.00 0.00 0.00 2.66
28 29 6.043938 AGGGTGACATGGTTAAGAAGAAAGTA 59.956 38.462 0.00 0.00 0.00 2.24
29 30 6.371825 GGGTGACATGGTTAAGAAGAAAGTAG 59.628 42.308 0.00 0.00 0.00 2.57
30 31 7.159372 GGTGACATGGTTAAGAAGAAAGTAGA 58.841 38.462 0.00 0.00 0.00 2.59
31 32 7.660208 GGTGACATGGTTAAGAAGAAAGTAGAA 59.340 37.037 0.00 0.00 0.00 2.10
32 33 9.052759 GTGACATGGTTAAGAAGAAAGTAGAAA 57.947 33.333 0.00 0.00 0.00 2.52
33 34 9.621629 TGACATGGTTAAGAAGAAAGTAGAAAA 57.378 29.630 0.00 0.00 0.00 2.29
57 58 6.658188 AAATCCTAGTAGCAGACATACTCC 57.342 41.667 0.00 0.00 35.20 3.85
58 59 4.101645 TCCTAGTAGCAGACATACTCCC 57.898 50.000 0.00 0.00 35.20 4.30
59 60 3.722627 TCCTAGTAGCAGACATACTCCCT 59.277 47.826 0.00 0.00 35.20 4.20
60 61 4.076394 CCTAGTAGCAGACATACTCCCTC 58.924 52.174 0.00 0.00 35.20 4.30
61 62 2.952116 AGTAGCAGACATACTCCCTCC 58.048 52.381 0.00 0.00 0.00 4.30
62 63 2.516277 AGTAGCAGACATACTCCCTCCT 59.484 50.000 0.00 0.00 0.00 3.69
63 64 2.559381 AGCAGACATACTCCCTCCTT 57.441 50.000 0.00 0.00 0.00 3.36
64 65 2.839228 AGCAGACATACTCCCTCCTTT 58.161 47.619 0.00 0.00 0.00 3.11
65 66 3.185455 AGCAGACATACTCCCTCCTTTT 58.815 45.455 0.00 0.00 0.00 2.27
66 67 3.589288 AGCAGACATACTCCCTCCTTTTT 59.411 43.478 0.00 0.00 0.00 1.94
109 110 8.450578 TTGATCAAAGTCAAACTATGTCAACT 57.549 30.769 5.45 0.00 35.31 3.16
110 111 8.450578 TGATCAAAGTCAAACTATGTCAACTT 57.549 30.769 0.00 0.00 0.00 2.66
111 112 8.902806 TGATCAAAGTCAAACTATGTCAACTTT 58.097 29.630 0.00 0.00 37.41 2.66
114 115 9.997482 TCAAAGTCAAACTATGTCAACTTTAAC 57.003 29.630 0.00 0.00 35.74 2.01
118 119 8.975439 AGTCAAACTATGTCAACTTTAACTACG 58.025 33.333 0.00 0.00 0.00 3.51
119 120 8.758715 GTCAAACTATGTCAACTTTAACTACGT 58.241 33.333 0.00 0.00 0.00 3.57
120 121 9.316730 TCAAACTATGTCAACTTTAACTACGTT 57.683 29.630 0.00 0.00 0.00 3.99
121 122 9.925268 CAAACTATGTCAACTTTAACTACGTTT 57.075 29.630 0.00 0.00 0.00 3.60
128 129 9.979578 TGTCAACTTTAACTACGTTTATAGGAA 57.020 29.630 0.00 0.00 0.00 3.36
219 220 9.982651 TCATATAGCTTTGTATTGTACTTCCTC 57.017 33.333 0.00 0.00 0.00 3.71
220 221 9.209175 CATATAGCTTTGTATTGTACTTCCTCC 57.791 37.037 0.00 0.00 0.00 4.30
221 222 4.504858 AGCTTTGTATTGTACTTCCTCCG 58.495 43.478 0.00 0.00 0.00 4.63
222 223 4.020485 AGCTTTGTATTGTACTTCCTCCGT 60.020 41.667 0.00 0.00 0.00 4.69
223 224 4.694037 GCTTTGTATTGTACTTCCTCCGTT 59.306 41.667 0.00 0.00 0.00 4.44
224 225 5.180680 GCTTTGTATTGTACTTCCTCCGTTT 59.819 40.000 0.00 0.00 0.00 3.60
225 226 6.620089 GCTTTGTATTGTACTTCCTCCGTTTC 60.620 42.308 0.00 0.00 0.00 2.78
226 227 5.733620 TGTATTGTACTTCCTCCGTTTCT 57.266 39.130 0.00 0.00 0.00 2.52
227 228 6.839124 TGTATTGTACTTCCTCCGTTTCTA 57.161 37.500 0.00 0.00 0.00 2.10
228 229 7.230849 TGTATTGTACTTCCTCCGTTTCTAA 57.769 36.000 0.00 0.00 0.00 2.10
229 230 7.669427 TGTATTGTACTTCCTCCGTTTCTAAA 58.331 34.615 0.00 0.00 0.00 1.85
230 231 8.316214 TGTATTGTACTTCCTCCGTTTCTAAAT 58.684 33.333 0.00 0.00 0.00 1.40
231 232 9.807649 GTATTGTACTTCCTCCGTTTCTAAATA 57.192 33.333 0.00 0.00 0.00 1.40
238 239 8.979534 ACTTCCTCCGTTTCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
239 240 9.819267 CTTCCTCCGTTTCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
244 245 9.947433 TCCGTTTCTAAATATAAGTCTTTTGGA 57.053 29.630 0.00 0.00 0.00 3.53
262 263 9.838339 TCTTTTGGAGAGATTTCATTATAGACC 57.162 33.333 0.00 0.00 0.00 3.85
263 264 9.618890 CTTTTGGAGAGATTTCATTATAGACCA 57.381 33.333 0.00 0.00 0.00 4.02
264 265 8.964476 TTTGGAGAGATTTCATTATAGACCAC 57.036 34.615 0.00 0.00 0.00 4.16
265 266 7.675161 TGGAGAGATTTCATTATAGACCACA 57.325 36.000 0.00 0.00 0.00 4.17
266 267 8.267620 TGGAGAGATTTCATTATAGACCACAT 57.732 34.615 0.00 0.00 0.00 3.21
267 268 9.379770 TGGAGAGATTTCATTATAGACCACATA 57.620 33.333 0.00 0.00 0.00 2.29
268 269 9.646427 GGAGAGATTTCATTATAGACCACATAC 57.354 37.037 0.00 0.00 0.00 2.39
269 270 9.347934 GAGAGATTTCATTATAGACCACATACG 57.652 37.037 0.00 0.00 0.00 3.06
270 271 8.307483 AGAGATTTCATTATAGACCACATACGG 58.693 37.037 0.00 0.00 0.00 4.02
271 272 8.190326 AGATTTCATTATAGACCACATACGGA 57.810 34.615 0.00 0.00 0.00 4.69
272 273 8.307483 AGATTTCATTATAGACCACATACGGAG 58.693 37.037 0.00 0.00 0.00 4.63
273 274 5.386958 TCATTATAGACCACATACGGAGC 57.613 43.478 0.00 0.00 0.00 4.70
274 275 4.830600 TCATTATAGACCACATACGGAGCA 59.169 41.667 0.00 0.00 0.00 4.26
275 276 5.303333 TCATTATAGACCACATACGGAGCAA 59.697 40.000 0.00 0.00 0.00 3.91
276 277 5.601583 TTATAGACCACATACGGAGCAAA 57.398 39.130 0.00 0.00 0.00 3.68
277 278 2.851263 AGACCACATACGGAGCAAAA 57.149 45.000 0.00 0.00 0.00 2.44
278 279 3.350219 AGACCACATACGGAGCAAAAT 57.650 42.857 0.00 0.00 0.00 1.82
279 280 4.481368 AGACCACATACGGAGCAAAATA 57.519 40.909 0.00 0.00 0.00 1.40
280 281 4.839121 AGACCACATACGGAGCAAAATAA 58.161 39.130 0.00 0.00 0.00 1.40
281 282 5.250200 AGACCACATACGGAGCAAAATAAA 58.750 37.500 0.00 0.00 0.00 1.40
282 283 5.885912 AGACCACATACGGAGCAAAATAAAT 59.114 36.000 0.00 0.00 0.00 1.40
283 284 5.890334 ACCACATACGGAGCAAAATAAATG 58.110 37.500 0.00 0.00 0.00 2.32
284 285 5.650266 ACCACATACGGAGCAAAATAAATGA 59.350 36.000 0.00 0.00 0.00 2.57
285 286 6.151985 ACCACATACGGAGCAAAATAAATGAA 59.848 34.615 0.00 0.00 0.00 2.57
286 287 7.147915 ACCACATACGGAGCAAAATAAATGAAT 60.148 33.333 0.00 0.00 0.00 2.57
287 288 7.379529 CCACATACGGAGCAAAATAAATGAATC 59.620 37.037 0.00 0.00 0.00 2.52
288 289 8.131100 CACATACGGAGCAAAATAAATGAATCT 58.869 33.333 0.00 0.00 0.00 2.40
289 290 9.337396 ACATACGGAGCAAAATAAATGAATCTA 57.663 29.630 0.00 0.00 0.00 1.98
290 291 9.599322 CATACGGAGCAAAATAAATGAATCTAC 57.401 33.333 0.00 0.00 0.00 2.59
291 292 7.624360 ACGGAGCAAAATAAATGAATCTACA 57.376 32.000 0.00 0.00 0.00 2.74
292 293 7.472543 ACGGAGCAAAATAAATGAATCTACAC 58.527 34.615 0.00 0.00 0.00 2.90
293 294 7.336931 ACGGAGCAAAATAAATGAATCTACACT 59.663 33.333 0.00 0.00 0.00 3.55
294 295 7.852945 CGGAGCAAAATAAATGAATCTACACTC 59.147 37.037 0.00 0.00 0.00 3.51
295 296 8.897752 GGAGCAAAATAAATGAATCTACACTCT 58.102 33.333 0.00 0.00 0.00 3.24
306 307 9.624373 AATGAATCTACACTCTAAAATGCATCT 57.376 29.630 0.00 0.00 0.00 2.90
327 328 9.613957 GCATCTATATACATACGTATGTGATCC 57.386 37.037 38.87 24.00 45.77 3.36
341 342 8.861086 ACGTATGTGATCCATAGTAAAATCTCT 58.139 33.333 0.00 0.00 36.71 3.10
368 369 9.774413 ACAATAACTTATATTTAGGAACGGAGG 57.226 33.333 0.00 0.00 0.00 4.30
369 370 9.991906 CAATAACTTATATTTAGGAACGGAGGA 57.008 33.333 0.00 0.00 0.00 3.71
372 373 7.672122 ACTTATATTTAGGAACGGAGGAAGT 57.328 36.000 0.00 0.00 0.00 3.01
373 374 8.773033 ACTTATATTTAGGAACGGAGGAAGTA 57.227 34.615 0.00 0.00 0.00 2.24
374 375 8.858094 ACTTATATTTAGGAACGGAGGAAGTAG 58.142 37.037 0.00 0.00 0.00 2.57
375 376 9.075678 CTTATATTTAGGAACGGAGGAAGTAGA 57.924 37.037 0.00 0.00 0.00 2.59
376 377 9.597681 TTATATTTAGGAACGGAGGAAGTAGAT 57.402 33.333 0.00 0.00 0.00 1.98
377 378 5.593679 TTTAGGAACGGAGGAAGTAGATG 57.406 43.478 0.00 0.00 0.00 2.90
378 379 3.103080 AGGAACGGAGGAAGTAGATGT 57.897 47.619 0.00 0.00 0.00 3.06
379 380 3.442076 AGGAACGGAGGAAGTAGATGTT 58.558 45.455 0.00 0.00 0.00 2.71
380 381 4.607239 AGGAACGGAGGAAGTAGATGTTA 58.393 43.478 0.00 0.00 0.00 2.41
381 382 5.021458 AGGAACGGAGGAAGTAGATGTTAA 58.979 41.667 0.00 0.00 0.00 2.01
382 383 5.661759 AGGAACGGAGGAAGTAGATGTTAAT 59.338 40.000 0.00 0.00 0.00 1.40
383 384 6.837568 AGGAACGGAGGAAGTAGATGTTAATA 59.162 38.462 0.00 0.00 0.00 0.98
384 385 7.509659 AGGAACGGAGGAAGTAGATGTTAATAT 59.490 37.037 0.00 0.00 0.00 1.28
385 386 8.148999 GGAACGGAGGAAGTAGATGTTAATATT 58.851 37.037 0.00 0.00 0.00 1.28
386 387 9.543783 GAACGGAGGAAGTAGATGTTAATATTT 57.456 33.333 0.00 0.00 0.00 1.40
387 388 9.901172 AACGGAGGAAGTAGATGTTAATATTTT 57.099 29.630 0.00 0.00 0.00 1.82
388 389 9.901172 ACGGAGGAAGTAGATGTTAATATTTTT 57.099 29.630 0.00 0.00 0.00 1.94
421 422 8.687292 AGTTAGGGAAACTTTTAAACGAAGAT 57.313 30.769 0.00 0.00 46.61 2.40
422 423 9.783081 AGTTAGGGAAACTTTTAAACGAAGATA 57.217 29.630 0.00 0.00 46.61 1.98
424 425 9.783081 TTAGGGAAACTTTTAAACGAAGATAGT 57.217 29.630 0.00 0.00 0.00 2.12
426 427 9.433153 AGGGAAACTTTTAAACGAAGATAGTAG 57.567 33.333 0.00 0.00 0.00 2.57
427 428 9.212641 GGGAAACTTTTAAACGAAGATAGTAGT 57.787 33.333 0.00 0.00 0.00 2.73
464 465 2.154462 GGTCTGGTCTGGTGACAAATG 58.846 52.381 0.00 0.00 44.61 2.32
472 473 4.847255 GTGACAAATGGCACGAGC 57.153 55.556 3.21 0.00 45.07 5.03
474 475 2.324330 TGACAAATGGCACGAGCGG 61.324 57.895 0.00 0.00 43.41 5.52
527 530 1.067142 TCAGCACTTACGTAAGCCTGG 60.067 52.381 33.36 23.45 45.62 4.45
528 531 0.391263 AGCACTTACGTAAGCCTGGC 60.391 55.000 30.47 26.30 45.62 4.85
531 534 2.675889 GCACTTACGTAAGCCTGGCTAA 60.676 50.000 30.47 11.17 38.25 3.09
554 557 4.506886 TTTTTAAGGGCATGTACAACGG 57.493 40.909 0.00 0.00 0.00 4.44
555 558 2.863132 TTAAGGGCATGTACAACGGT 57.137 45.000 0.00 0.00 0.00 4.83
556 559 2.102070 TAAGGGCATGTACAACGGTG 57.898 50.000 0.00 0.00 0.00 4.94
557 560 0.608035 AAGGGCATGTACAACGGTGG 60.608 55.000 4.97 0.00 0.00 4.61
558 561 2.696759 GGGCATGTACAACGGTGGC 61.697 63.158 4.97 11.25 33.35 5.01
559 562 1.969064 GGCATGTACAACGGTGGCA 60.969 57.895 4.97 3.56 33.96 4.92
560 563 1.519751 GGCATGTACAACGGTGGCAA 61.520 55.000 4.97 0.00 33.96 4.52
561 564 0.525761 GCATGTACAACGGTGGCAAT 59.474 50.000 4.97 0.00 0.00 3.56
562 565 1.740585 GCATGTACAACGGTGGCAATA 59.259 47.619 4.97 0.00 0.00 1.90
563 566 2.477189 GCATGTACAACGGTGGCAATAC 60.477 50.000 4.97 0.00 0.00 1.89
564 567 1.810959 TGTACAACGGTGGCAATACC 58.189 50.000 4.97 0.00 37.37 2.73
575 578 0.736636 GGCAATACCAAACGGTAGCC 59.263 55.000 6.26 6.26 42.34 3.93
576 579 1.680860 GGCAATACCAAACGGTAGCCT 60.681 52.381 12.40 0.00 42.84 4.58
577 580 1.669265 GCAATACCAAACGGTAGCCTC 59.331 52.381 0.00 0.00 42.34 4.70
578 581 2.937873 GCAATACCAAACGGTAGCCTCA 60.938 50.000 0.00 0.00 42.34 3.86
579 582 3.541632 CAATACCAAACGGTAGCCTCAT 58.458 45.455 0.00 0.00 42.34 2.90
580 583 2.684001 TACCAAACGGTAGCCTCATG 57.316 50.000 0.00 0.00 38.03 3.07
581 584 0.690762 ACCAAACGGTAGCCTCATGT 59.309 50.000 0.00 0.00 33.92 3.21
582 585 1.903860 ACCAAACGGTAGCCTCATGTA 59.096 47.619 0.00 0.00 33.92 2.29
583 586 2.504175 ACCAAACGGTAGCCTCATGTAT 59.496 45.455 0.00 0.00 33.92 2.29
584 587 2.872245 CCAAACGGTAGCCTCATGTATG 59.128 50.000 0.00 0.00 0.00 2.39
585 588 2.240493 AACGGTAGCCTCATGTATGC 57.760 50.000 0.00 0.00 0.00 3.14
586 589 1.119684 ACGGTAGCCTCATGTATGCA 58.880 50.000 0.00 0.00 0.00 3.96
587 590 1.694150 ACGGTAGCCTCATGTATGCAT 59.306 47.619 3.79 3.79 35.32 3.96
600 603 4.965042 TGTATGCATGCGTATAAAGTCG 57.035 40.909 21.99 0.00 0.00 4.18
601 604 4.364860 TGTATGCATGCGTATAAAGTCGT 58.635 39.130 21.99 0.00 0.00 4.34
602 605 5.521544 TGTATGCATGCGTATAAAGTCGTA 58.478 37.500 21.99 0.00 0.00 3.43
603 606 6.153756 TGTATGCATGCGTATAAAGTCGTAT 58.846 36.000 21.99 3.38 33.26 3.06
604 607 4.965042 TGCATGCGTATAAAGTCGTATG 57.035 40.909 14.09 10.22 46.74 2.39
605 608 3.738791 TGCATGCGTATAAAGTCGTATGG 59.261 43.478 14.09 1.32 45.18 2.74
606 609 3.985279 GCATGCGTATAAAGTCGTATGGA 59.015 43.478 0.00 0.00 45.18 3.41
607 610 4.090066 GCATGCGTATAAAGTCGTATGGAG 59.910 45.833 0.00 0.00 45.18 3.86
608 611 3.635331 TGCGTATAAAGTCGTATGGAGC 58.365 45.455 0.00 0.00 0.00 4.70
609 612 3.067040 TGCGTATAAAGTCGTATGGAGCA 59.933 43.478 0.00 0.00 0.00 4.26
610 613 3.669122 GCGTATAAAGTCGTATGGAGCAG 59.331 47.826 0.00 0.00 0.00 4.24
611 614 3.669122 CGTATAAAGTCGTATGGAGCAGC 59.331 47.826 0.00 0.00 0.00 5.25
612 615 4.556898 CGTATAAAGTCGTATGGAGCAGCT 60.557 45.833 0.00 0.00 0.00 4.24
613 616 5.334646 CGTATAAAGTCGTATGGAGCAGCTA 60.335 44.000 0.00 0.00 0.00 3.32
614 617 5.730296 ATAAAGTCGTATGGAGCAGCTAT 57.270 39.130 0.00 0.00 0.00 2.97
615 618 3.651803 AAGTCGTATGGAGCAGCTATC 57.348 47.619 0.00 0.00 0.00 2.08
616 619 2.870175 AGTCGTATGGAGCAGCTATCT 58.130 47.619 0.00 0.00 0.00 1.98
617 620 4.022413 AGTCGTATGGAGCAGCTATCTA 57.978 45.455 0.00 0.00 0.00 1.98
618 621 4.594970 AGTCGTATGGAGCAGCTATCTAT 58.405 43.478 0.00 0.00 0.00 1.98
619 622 4.397730 AGTCGTATGGAGCAGCTATCTATG 59.602 45.833 0.00 0.00 0.00 2.23
620 623 3.696548 TCGTATGGAGCAGCTATCTATGG 59.303 47.826 0.00 1.18 0.00 2.74
621 624 3.181482 CGTATGGAGCAGCTATCTATGGG 60.181 52.174 0.00 0.00 0.00 4.00
622 625 2.702270 TGGAGCAGCTATCTATGGGA 57.298 50.000 0.00 0.00 0.00 4.37
623 626 2.533916 TGGAGCAGCTATCTATGGGAG 58.466 52.381 0.00 0.00 0.00 4.30
624 627 1.206849 GGAGCAGCTATCTATGGGAGC 59.793 57.143 0.00 0.00 36.42 4.70
625 628 1.898472 GAGCAGCTATCTATGGGAGCA 59.102 52.381 0.00 0.00 38.73 4.26
626 629 2.500910 GAGCAGCTATCTATGGGAGCAT 59.499 50.000 0.00 0.00 38.73 3.79
627 630 2.236644 AGCAGCTATCTATGGGAGCATG 59.763 50.000 0.00 0.00 38.73 4.06
628 631 2.680221 GCAGCTATCTATGGGAGCATGG 60.680 54.545 0.00 0.00 38.73 3.66
629 632 2.836372 CAGCTATCTATGGGAGCATGGA 59.164 50.000 0.00 0.00 38.73 3.41
630 633 3.262660 CAGCTATCTATGGGAGCATGGAA 59.737 47.826 0.00 0.00 38.73 3.53
631 634 3.262915 AGCTATCTATGGGAGCATGGAAC 59.737 47.826 0.00 0.00 38.73 3.62
632 635 3.620966 GCTATCTATGGGAGCATGGAACC 60.621 52.174 0.00 0.00 36.20 3.62
633 636 1.891933 TCTATGGGAGCATGGAACCA 58.108 50.000 0.00 0.00 37.41 3.67
634 637 2.204463 TCTATGGGAGCATGGAACCAA 58.796 47.619 0.00 0.00 36.44 3.67
635 638 2.092429 TCTATGGGAGCATGGAACCAAC 60.092 50.000 0.00 0.00 36.44 3.77
636 639 0.680921 ATGGGAGCATGGAACCAACG 60.681 55.000 0.00 0.00 36.44 4.10
637 640 2.046285 GGGAGCATGGAACCAACGG 61.046 63.158 0.00 0.00 0.00 4.44
638 641 1.002624 GGAGCATGGAACCAACGGA 60.003 57.895 0.00 0.00 0.00 4.69
639 642 0.608035 GGAGCATGGAACCAACGGAA 60.608 55.000 0.00 0.00 0.00 4.30
640 643 0.804989 GAGCATGGAACCAACGGAAG 59.195 55.000 0.00 0.00 0.00 3.46
641 644 1.212751 GCATGGAACCAACGGAAGC 59.787 57.895 0.00 0.00 0.00 3.86
642 645 1.523154 GCATGGAACCAACGGAAGCA 61.523 55.000 0.00 0.00 0.00 3.91
643 646 0.523072 CATGGAACCAACGGAAGCAG 59.477 55.000 0.00 0.00 0.00 4.24
644 647 1.244019 ATGGAACCAACGGAAGCAGC 61.244 55.000 0.00 0.00 0.00 5.25
645 648 1.896660 GGAACCAACGGAAGCAGCA 60.897 57.895 0.00 0.00 0.00 4.41
646 649 1.576421 GAACCAACGGAAGCAGCAG 59.424 57.895 0.00 0.00 0.00 4.24
647 650 2.463675 GAACCAACGGAAGCAGCAGC 62.464 60.000 0.00 0.00 42.56 5.25
668 671 4.729918 CTGGGGCCACTCACCAGC 62.730 72.222 6.53 0.00 44.55 4.85
670 673 3.971702 GGGGCCACTCACCAGCTT 61.972 66.667 4.39 0.00 0.00 3.74
671 674 2.116125 GGGCCACTCACCAGCTTT 59.884 61.111 4.39 0.00 0.00 3.51
672 675 1.531602 GGGCCACTCACCAGCTTTT 60.532 57.895 4.39 0.00 0.00 2.27
673 676 1.527433 GGGCCACTCACCAGCTTTTC 61.527 60.000 4.39 0.00 0.00 2.29
674 677 1.527433 GGCCACTCACCAGCTTTTCC 61.527 60.000 0.00 0.00 0.00 3.13
675 678 0.538287 GCCACTCACCAGCTTTTCCT 60.538 55.000 0.00 0.00 0.00 3.36
676 679 1.242076 CCACTCACCAGCTTTTCCTG 58.758 55.000 0.00 0.00 0.00 3.86
677 680 1.477558 CCACTCACCAGCTTTTCCTGT 60.478 52.381 0.00 0.00 0.00 4.00
678 681 2.301346 CACTCACCAGCTTTTCCTGTT 58.699 47.619 0.00 0.00 0.00 3.16
679 682 2.291741 CACTCACCAGCTTTTCCTGTTC 59.708 50.000 0.00 0.00 0.00 3.18
680 683 2.173569 ACTCACCAGCTTTTCCTGTTCT 59.826 45.455 0.00 0.00 0.00 3.01
681 684 3.217626 CTCACCAGCTTTTCCTGTTCTT 58.782 45.455 0.00 0.00 0.00 2.52
682 685 3.631250 TCACCAGCTTTTCCTGTTCTTT 58.369 40.909 0.00 0.00 0.00 2.52
683 686 4.023291 TCACCAGCTTTTCCTGTTCTTTT 58.977 39.130 0.00 0.00 0.00 2.27
684 687 4.097892 TCACCAGCTTTTCCTGTTCTTTTC 59.902 41.667 0.00 0.00 0.00 2.29
685 688 4.098501 CACCAGCTTTTCCTGTTCTTTTCT 59.901 41.667 0.00 0.00 0.00 2.52
686 689 4.711846 ACCAGCTTTTCCTGTTCTTTTCTT 59.288 37.500 0.00 0.00 0.00 2.52
687 690 5.187772 ACCAGCTTTTCCTGTTCTTTTCTTT 59.812 36.000 0.00 0.00 0.00 2.52
688 691 5.750547 CCAGCTTTTCCTGTTCTTTTCTTTC 59.249 40.000 0.00 0.00 0.00 2.62
689 692 5.750547 CAGCTTTTCCTGTTCTTTTCTTTCC 59.249 40.000 0.00 0.00 0.00 3.13
690 693 5.050490 GCTTTTCCTGTTCTTTTCTTTCCC 58.950 41.667 0.00 0.00 0.00 3.97
691 694 5.163405 GCTTTTCCTGTTCTTTTCTTTCCCT 60.163 40.000 0.00 0.00 0.00 4.20
692 695 6.465439 TTTTCCTGTTCTTTTCTTTCCCTC 57.535 37.500 0.00 0.00 0.00 4.30
693 696 4.788925 TCCTGTTCTTTTCTTTCCCTCA 57.211 40.909 0.00 0.00 0.00 3.86
694 697 5.124036 TCCTGTTCTTTTCTTTCCCTCAA 57.876 39.130 0.00 0.00 0.00 3.02
695 698 5.515106 TCCTGTTCTTTTCTTTCCCTCAAA 58.485 37.500 0.00 0.00 0.00 2.69
696 699 6.136155 TCCTGTTCTTTTCTTTCCCTCAAAT 58.864 36.000 0.00 0.00 0.00 2.32
697 700 6.040842 TCCTGTTCTTTTCTTTCCCTCAAATG 59.959 38.462 0.00 0.00 0.00 2.32
698 701 6.040842 CCTGTTCTTTTCTTTCCCTCAAATGA 59.959 38.462 0.00 0.00 0.00 2.57
699 702 7.042797 TGTTCTTTTCTTTCCCTCAAATGAG 57.957 36.000 3.37 3.37 41.71 2.90
700 703 5.712152 TCTTTTCTTTCCCTCAAATGAGC 57.288 39.130 4.87 0.00 40.75 4.26
701 704 5.388654 TCTTTTCTTTCCCTCAAATGAGCT 58.611 37.500 4.87 0.00 40.75 4.09
702 705 5.474876 TCTTTTCTTTCCCTCAAATGAGCTC 59.525 40.000 6.82 6.82 40.75 4.09
703 706 4.371624 TTCTTTCCCTCAAATGAGCTCA 57.628 40.909 20.79 20.79 40.75 4.26
704 707 4.371624 TCTTTCCCTCAAATGAGCTCAA 57.628 40.909 22.50 2.60 40.75 3.02
705 708 4.074970 TCTTTCCCTCAAATGAGCTCAAC 58.925 43.478 22.50 0.00 40.75 3.18
706 709 2.496899 TCCCTCAAATGAGCTCAACC 57.503 50.000 22.50 0.00 40.75 3.77
707 710 1.004745 TCCCTCAAATGAGCTCAACCC 59.995 52.381 22.50 0.00 40.75 4.11
708 711 1.005215 CCCTCAAATGAGCTCAACCCT 59.995 52.381 22.50 0.00 40.75 4.34
709 712 2.363683 CCTCAAATGAGCTCAACCCTC 58.636 52.381 22.50 0.00 40.75 4.30
710 713 2.026449 CCTCAAATGAGCTCAACCCTCT 60.026 50.000 22.50 0.00 40.75 3.69
711 714 3.269178 CTCAAATGAGCTCAACCCTCTC 58.731 50.000 22.50 0.00 35.13 3.20
712 715 2.909006 TCAAATGAGCTCAACCCTCTCT 59.091 45.455 22.50 0.00 0.00 3.10
713 716 3.008330 CAAATGAGCTCAACCCTCTCTG 58.992 50.000 22.50 5.53 0.00 3.35
714 717 1.202330 ATGAGCTCAACCCTCTCTGG 58.798 55.000 22.50 0.00 0.00 3.86
715 718 1.220477 GAGCTCAACCCTCTCTGGC 59.780 63.158 9.40 0.00 0.00 4.85
716 719 1.229464 AGCTCAACCCTCTCTGGCT 60.229 57.895 0.00 0.00 0.00 4.75
717 720 1.220477 GCTCAACCCTCTCTGGCTC 59.780 63.158 0.00 0.00 0.00 4.70
718 721 1.548357 GCTCAACCCTCTCTGGCTCA 61.548 60.000 0.00 0.00 0.00 4.26
719 722 1.202330 CTCAACCCTCTCTGGCTCAT 58.798 55.000 0.00 0.00 0.00 2.90
720 723 1.138661 CTCAACCCTCTCTGGCTCATC 59.861 57.143 0.00 0.00 0.00 2.92
721 724 0.179936 CAACCCTCTCTGGCTCATCC 59.820 60.000 0.00 0.00 0.00 3.51
722 725 0.043940 AACCCTCTCTGGCTCATCCT 59.956 55.000 0.00 0.00 35.26 3.24
723 726 0.398381 ACCCTCTCTGGCTCATCCTC 60.398 60.000 0.00 0.00 35.26 3.71
724 727 0.105555 CCCTCTCTGGCTCATCCTCT 60.106 60.000 0.00 0.00 35.26 3.69
725 728 1.331214 CCTCTCTGGCTCATCCTCTC 58.669 60.000 0.00 0.00 35.26 3.20
726 729 1.133388 CCTCTCTGGCTCATCCTCTCT 60.133 57.143 0.00 0.00 35.26 3.10
727 730 2.233271 CTCTCTGGCTCATCCTCTCTC 58.767 57.143 0.00 0.00 35.26 3.20
728 731 1.852309 TCTCTGGCTCATCCTCTCTCT 59.148 52.381 0.00 0.00 35.26 3.10
729 732 2.158623 TCTCTGGCTCATCCTCTCTCTC 60.159 54.545 0.00 0.00 35.26 3.20
730 733 1.852309 TCTGGCTCATCCTCTCTCTCT 59.148 52.381 0.00 0.00 35.26 3.10
731 734 2.158623 TCTGGCTCATCCTCTCTCTCTC 60.159 54.545 0.00 0.00 35.26 3.20
732 735 1.133513 TGGCTCATCCTCTCTCTCTCC 60.134 57.143 0.00 0.00 35.26 3.71
733 736 1.145738 GGCTCATCCTCTCTCTCTCCT 59.854 57.143 0.00 0.00 0.00 3.69
734 737 2.508526 GCTCATCCTCTCTCTCTCCTC 58.491 57.143 0.00 0.00 0.00 3.71
735 738 2.158623 GCTCATCCTCTCTCTCTCCTCA 60.159 54.545 0.00 0.00 0.00 3.86
736 739 3.480470 CTCATCCTCTCTCTCTCCTCAC 58.520 54.545 0.00 0.00 0.00 3.51
737 740 3.122480 TCATCCTCTCTCTCTCCTCACT 58.878 50.000 0.00 0.00 0.00 3.41
738 741 3.527253 TCATCCTCTCTCTCTCCTCACTT 59.473 47.826 0.00 0.00 0.00 3.16
739 742 4.017591 TCATCCTCTCTCTCTCCTCACTTT 60.018 45.833 0.00 0.00 0.00 2.66
740 743 3.963129 TCCTCTCTCTCTCCTCACTTTC 58.037 50.000 0.00 0.00 0.00 2.62
741 744 3.591527 TCCTCTCTCTCTCCTCACTTTCT 59.408 47.826 0.00 0.00 0.00 2.52
742 745 4.044065 TCCTCTCTCTCTCCTCACTTTCTT 59.956 45.833 0.00 0.00 0.00 2.52
743 746 4.772100 CCTCTCTCTCTCCTCACTTTCTTT 59.228 45.833 0.00 0.00 0.00 2.52
744 747 5.336690 CCTCTCTCTCTCCTCACTTTCTTTG 60.337 48.000 0.00 0.00 0.00 2.77
745 748 4.021544 TCTCTCTCTCCTCACTTTCTTTGC 60.022 45.833 0.00 0.00 0.00 3.68
746 749 3.900601 TCTCTCTCCTCACTTTCTTTGCT 59.099 43.478 0.00 0.00 0.00 3.91
747 750 4.346418 TCTCTCTCCTCACTTTCTTTGCTT 59.654 41.667 0.00 0.00 0.00 3.91
748 751 5.041191 TCTCTCCTCACTTTCTTTGCTTT 57.959 39.130 0.00 0.00 0.00 3.51
749 752 6.042093 TCTCTCTCCTCACTTTCTTTGCTTTA 59.958 38.462 0.00 0.00 0.00 1.85
750 753 6.773638 TCTCTCCTCACTTTCTTTGCTTTAT 58.226 36.000 0.00 0.00 0.00 1.40
751 754 7.227156 TCTCTCCTCACTTTCTTTGCTTTATT 58.773 34.615 0.00 0.00 0.00 1.40
752 755 7.173907 TCTCTCCTCACTTTCTTTGCTTTATTG 59.826 37.037 0.00 0.00 0.00 1.90
753 756 6.998074 TCTCCTCACTTTCTTTGCTTTATTGA 59.002 34.615 0.00 0.00 0.00 2.57
754 757 7.667219 TCTCCTCACTTTCTTTGCTTTATTGAT 59.333 33.333 0.00 0.00 0.00 2.57
755 758 7.596494 TCCTCACTTTCTTTGCTTTATTGATG 58.404 34.615 0.00 0.00 0.00 3.07
756 759 6.810182 CCTCACTTTCTTTGCTTTATTGATGG 59.190 38.462 0.00 0.00 0.00 3.51
757 760 7.309377 CCTCACTTTCTTTGCTTTATTGATGGA 60.309 37.037 0.00 0.00 0.00 3.41
758 761 7.596494 TCACTTTCTTTGCTTTATTGATGGAG 58.404 34.615 0.00 0.00 0.00 3.86
759 762 6.309737 CACTTTCTTTGCTTTATTGATGGAGC 59.690 38.462 0.00 0.00 35.74 4.70
760 763 4.621068 TCTTTGCTTTATTGATGGAGCG 57.379 40.909 0.00 0.00 37.94 5.03
761 764 2.849880 TTGCTTTATTGATGGAGCGC 57.150 45.000 0.00 0.00 37.94 5.92
762 765 1.024271 TGCTTTATTGATGGAGCGCC 58.976 50.000 2.29 0.00 37.94 6.53
763 766 1.312815 GCTTTATTGATGGAGCGCCT 58.687 50.000 8.34 0.00 34.31 5.52
764 767 2.158827 TGCTTTATTGATGGAGCGCCTA 60.159 45.455 8.34 0.00 37.94 3.93
765 768 2.224314 GCTTTATTGATGGAGCGCCTAC 59.776 50.000 8.34 2.21 34.31 3.18
766 769 2.543777 TTATTGATGGAGCGCCTACC 57.456 50.000 8.34 6.33 34.31 3.18
767 770 1.717032 TATTGATGGAGCGCCTACCT 58.283 50.000 8.34 0.00 34.31 3.08
768 771 0.394565 ATTGATGGAGCGCCTACCTC 59.605 55.000 8.34 6.15 34.31 3.85
772 775 2.123640 GGAGCGCCTACCTCCTCT 60.124 66.667 2.29 0.00 44.40 3.69
773 776 2.494530 GGAGCGCCTACCTCCTCTG 61.495 68.421 2.29 0.00 44.40 3.35
774 777 3.145422 GAGCGCCTACCTCCTCTGC 62.145 68.421 2.29 0.00 0.00 4.26
775 778 3.461773 GCGCCTACCTCCTCTGCA 61.462 66.667 0.00 0.00 0.00 4.41
776 779 3.019003 GCGCCTACCTCCTCTGCAA 62.019 63.158 0.00 0.00 0.00 4.08
777 780 1.142748 CGCCTACCTCCTCTGCAAG 59.857 63.158 0.00 0.00 0.00 4.01
778 781 1.323271 CGCCTACCTCCTCTGCAAGA 61.323 60.000 0.00 0.00 43.69 3.02
788 791 3.305709 TCTGCAAGAGGTCGTTTGG 57.694 52.632 0.00 0.00 38.67 3.28
789 792 0.250295 TCTGCAAGAGGTCGTTTGGG 60.250 55.000 0.00 0.00 38.67 4.12
790 793 0.535102 CTGCAAGAGGTCGTTTGGGT 60.535 55.000 0.00 0.00 34.07 4.51
791 794 0.534203 TGCAAGAGGTCGTTTGGGTC 60.534 55.000 0.00 0.00 0.00 4.46
792 795 0.250338 GCAAGAGGTCGTTTGGGTCT 60.250 55.000 0.00 0.00 0.00 3.85
793 796 1.512926 CAAGAGGTCGTTTGGGTCTG 58.487 55.000 0.00 0.00 0.00 3.51
794 797 0.250338 AAGAGGTCGTTTGGGTCTGC 60.250 55.000 0.00 0.00 0.00 4.26
795 798 1.070786 GAGGTCGTTTGGGTCTGCA 59.929 57.895 0.00 0.00 0.00 4.41
796 799 0.951040 GAGGTCGTTTGGGTCTGCAG 60.951 60.000 7.63 7.63 0.00 4.41
797 800 1.966451 GGTCGTTTGGGTCTGCAGG 60.966 63.158 15.13 0.00 0.00 4.85
798 801 2.281484 TCGTTTGGGTCTGCAGGC 60.281 61.111 15.13 13.00 0.00 4.85
799 802 2.594303 CGTTTGGGTCTGCAGGCA 60.594 61.111 21.89 0.00 0.00 4.75
800 803 2.620112 CGTTTGGGTCTGCAGGCAG 61.620 63.158 21.89 14.97 44.86 4.85
801 804 1.529244 GTTTGGGTCTGCAGGCAGT 60.529 57.895 21.89 0.00 43.96 4.40
802 805 0.250727 GTTTGGGTCTGCAGGCAGTA 60.251 55.000 21.89 2.12 43.96 2.74
803 806 0.036732 TTTGGGTCTGCAGGCAGTAG 59.963 55.000 21.89 0.00 43.96 2.57
804 807 1.127567 TTGGGTCTGCAGGCAGTAGT 61.128 55.000 21.89 0.00 43.96 2.73
805 808 1.219393 GGGTCTGCAGGCAGTAGTC 59.781 63.158 21.89 0.43 43.96 2.59
806 809 1.261238 GGGTCTGCAGGCAGTAGTCT 61.261 60.000 21.89 0.00 43.96 3.24
807 810 0.610687 GGTCTGCAGGCAGTAGTCTT 59.389 55.000 21.89 0.00 43.96 3.01
808 811 1.002544 GGTCTGCAGGCAGTAGTCTTT 59.997 52.381 21.89 0.00 43.96 2.52
809 812 2.551071 GGTCTGCAGGCAGTAGTCTTTT 60.551 50.000 21.89 0.00 43.96 2.27
810 813 3.142174 GTCTGCAGGCAGTAGTCTTTTT 58.858 45.455 14.88 0.00 43.96 1.94
811 814 4.315803 GTCTGCAGGCAGTAGTCTTTTTA 58.684 43.478 14.88 0.00 43.96 1.52
812 815 4.755123 GTCTGCAGGCAGTAGTCTTTTTAA 59.245 41.667 14.88 0.00 43.96 1.52
813 816 4.755123 TCTGCAGGCAGTAGTCTTTTTAAC 59.245 41.667 19.75 0.00 43.96 2.01
814 817 4.714632 TGCAGGCAGTAGTCTTTTTAACT 58.285 39.130 0.00 0.00 0.00 2.24
815 818 4.755123 TGCAGGCAGTAGTCTTTTTAACTC 59.245 41.667 0.00 0.00 0.00 3.01
816 819 4.143094 GCAGGCAGTAGTCTTTTTAACTCG 60.143 45.833 0.00 0.00 0.00 4.18
817 820 5.227908 CAGGCAGTAGTCTTTTTAACTCGA 58.772 41.667 0.00 0.00 0.00 4.04
818 821 5.869888 CAGGCAGTAGTCTTTTTAACTCGAT 59.130 40.000 0.00 0.00 0.00 3.59
819 822 6.369065 CAGGCAGTAGTCTTTTTAACTCGATT 59.631 38.462 0.00 0.00 0.00 3.34
820 823 6.590677 AGGCAGTAGTCTTTTTAACTCGATTC 59.409 38.462 0.00 0.00 0.00 2.52
821 824 6.590677 GGCAGTAGTCTTTTTAACTCGATTCT 59.409 38.462 0.00 0.00 0.00 2.40
822 825 7.201453 GGCAGTAGTCTTTTTAACTCGATTCTC 60.201 40.741 0.00 0.00 0.00 2.87
823 826 7.201453 GCAGTAGTCTTTTTAACTCGATTCTCC 60.201 40.741 0.00 0.00 0.00 3.71
824 827 7.813148 CAGTAGTCTTTTTAACTCGATTCTCCA 59.187 37.037 0.00 0.00 0.00 3.86
825 828 7.813627 AGTAGTCTTTTTAACTCGATTCTCCAC 59.186 37.037 0.00 0.00 0.00 4.02
826 829 5.634020 AGTCTTTTTAACTCGATTCTCCACG 59.366 40.000 0.00 0.00 0.00 4.94
827 830 4.927425 TCTTTTTAACTCGATTCTCCACGG 59.073 41.667 0.00 0.00 0.00 4.94
828 831 2.288961 TTAACTCGATTCTCCACGGC 57.711 50.000 0.00 0.00 0.00 5.68
829 832 1.179152 TAACTCGATTCTCCACGGCA 58.821 50.000 0.00 0.00 0.00 5.69
830 833 0.108615 AACTCGATTCTCCACGGCAG 60.109 55.000 0.00 0.00 0.00 4.85
831 834 0.965866 ACTCGATTCTCCACGGCAGA 60.966 55.000 0.00 0.00 0.00 4.26
832 835 0.387202 CTCGATTCTCCACGGCAGAT 59.613 55.000 0.00 0.00 0.00 2.90
833 836 0.103026 TCGATTCTCCACGGCAGATG 59.897 55.000 0.00 0.00 0.00 2.90
834 837 0.103026 CGATTCTCCACGGCAGATGA 59.897 55.000 0.00 0.00 0.00 2.92
835 838 1.269988 CGATTCTCCACGGCAGATGAT 60.270 52.381 0.00 0.00 0.00 2.45
836 839 2.804572 CGATTCTCCACGGCAGATGATT 60.805 50.000 0.00 0.00 0.00 2.57
837 840 2.315925 TTCTCCACGGCAGATGATTC 57.684 50.000 0.00 0.00 0.00 2.52
838 841 1.489481 TCTCCACGGCAGATGATTCT 58.511 50.000 0.00 0.00 0.00 2.40
839 842 1.410517 TCTCCACGGCAGATGATTCTC 59.589 52.381 0.00 0.00 0.00 2.87
840 843 0.465705 TCCACGGCAGATGATTCTCC 59.534 55.000 0.00 0.00 0.00 3.71
841 844 0.178767 CCACGGCAGATGATTCTCCA 59.821 55.000 0.00 0.00 0.00 3.86
842 845 1.407299 CCACGGCAGATGATTCTCCAA 60.407 52.381 0.00 0.00 0.00 3.53
843 846 1.667724 CACGGCAGATGATTCTCCAAC 59.332 52.381 0.00 0.00 0.00 3.77
844 847 0.933097 CGGCAGATGATTCTCCAACG 59.067 55.000 0.00 0.00 0.00 4.10
845 848 1.740380 CGGCAGATGATTCTCCAACGT 60.740 52.381 0.00 0.00 0.00 3.99
846 849 1.667724 GGCAGATGATTCTCCAACGTG 59.332 52.381 0.00 0.00 0.00 4.49
847 850 1.667724 GCAGATGATTCTCCAACGTGG 59.332 52.381 0.00 0.00 39.43 4.94
848 851 2.677902 GCAGATGATTCTCCAACGTGGA 60.678 50.000 0.00 0.00 45.98 4.02
849 852 2.932614 CAGATGATTCTCCAACGTGGAC 59.067 50.000 0.00 0.00 42.67 4.02
850 853 1.927174 GATGATTCTCCAACGTGGACG 59.073 52.381 0.00 0.00 42.67 4.79
851 854 0.037697 TGATTCTCCAACGTGGACGG 60.038 55.000 3.93 0.00 42.67 4.79
852 855 0.739813 GATTCTCCAACGTGGACGGG 60.740 60.000 3.93 0.00 42.67 5.28
853 856 2.798148 ATTCTCCAACGTGGACGGGC 62.798 60.000 3.93 0.00 42.67 6.13
886 889 2.802792 CGTGGAGCATTGGCCATG 59.197 61.111 6.09 8.63 42.56 3.66
948 951 2.974698 GCGCTGTGCCTGTGTTCT 60.975 61.111 0.00 0.00 37.76 3.01
950 953 2.024918 CGCTGTGCCTGTGTTCTTT 58.975 52.632 0.00 0.00 0.00 2.52
996 1004 1.595382 CAGATTCGGATCACGGCCC 60.595 63.158 6.44 0.00 44.45 5.80
1321 1356 1.560923 GCGCGTTCATGATCTACACT 58.439 50.000 8.43 0.00 0.00 3.55
1618 1653 2.203451 ATCGAGGGGTACGGCGAT 60.203 61.111 16.62 0.00 36.91 4.58
2139 2188 2.684881 ACAAGTGTGCTTTGAGTTCTGG 59.315 45.455 0.00 0.00 31.49 3.86
2220 2269 3.691342 CGAGGAAGGCGACCACCA 61.691 66.667 4.17 0.00 0.00 4.17
2241 2290 0.321919 GTCCATCAGTTGCAGAGCCA 60.322 55.000 0.00 0.00 0.00 4.75
2333 2382 4.335647 CACCCGCTGGCCTTCACT 62.336 66.667 3.32 0.00 33.59 3.41
2589 2644 2.030027 TATGATCGCCCCCTCAATCT 57.970 50.000 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.801380 TCTTCTTAACCATGTCACCCTAAC 58.199 41.667 0.00 0.00 0.00 2.34
1 2 6.442541 TTCTTCTTAACCATGTCACCCTAA 57.557 37.500 0.00 0.00 0.00 2.69
2 3 6.043938 ACTTTCTTCTTAACCATGTCACCCTA 59.956 38.462 0.00 0.00 0.00 3.53
3 4 4.993705 TTCTTCTTAACCATGTCACCCT 57.006 40.909 0.00 0.00 0.00 4.34
4 5 5.070685 ACTTTCTTCTTAACCATGTCACCC 58.929 41.667 0.00 0.00 0.00 4.61
5 6 7.159372 TCTACTTTCTTCTTAACCATGTCACC 58.841 38.462 0.00 0.00 0.00 4.02
6 7 8.603242 TTCTACTTTCTTCTTAACCATGTCAC 57.397 34.615 0.00 0.00 0.00 3.67
7 8 9.621629 TTTTCTACTTTCTTCTTAACCATGTCA 57.378 29.630 0.00 0.00 0.00 3.58
32 33 7.419172 GGGAGTATGTCTGCTACTAGGATTTTT 60.419 40.741 0.00 0.00 34.83 1.94
33 34 6.042208 GGGAGTATGTCTGCTACTAGGATTTT 59.958 42.308 0.00 0.00 34.83 1.82
34 35 5.540719 GGGAGTATGTCTGCTACTAGGATTT 59.459 44.000 0.00 0.00 34.83 2.17
35 36 5.081032 GGGAGTATGTCTGCTACTAGGATT 58.919 45.833 0.00 0.00 34.83 3.01
36 37 4.355588 AGGGAGTATGTCTGCTACTAGGAT 59.644 45.833 0.00 0.00 34.83 3.24
37 38 3.722627 AGGGAGTATGTCTGCTACTAGGA 59.277 47.826 0.00 0.00 34.83 2.94
38 39 4.076394 GAGGGAGTATGTCTGCTACTAGG 58.924 52.174 0.00 0.00 34.83 3.02
39 40 4.076394 GGAGGGAGTATGTCTGCTACTAG 58.924 52.174 0.00 0.00 34.83 2.57
40 41 3.722627 AGGAGGGAGTATGTCTGCTACTA 59.277 47.826 0.00 0.00 34.83 1.82
41 42 2.516277 AGGAGGGAGTATGTCTGCTACT 59.484 50.000 0.00 0.00 34.83 2.57
42 43 2.952116 AGGAGGGAGTATGTCTGCTAC 58.048 52.381 0.00 0.00 34.83 3.58
43 44 3.689872 AAGGAGGGAGTATGTCTGCTA 57.310 47.619 0.00 0.00 34.83 3.49
44 45 2.559381 AAGGAGGGAGTATGTCTGCT 57.441 50.000 0.00 0.00 34.83 4.24
45 46 3.636153 AAAAGGAGGGAGTATGTCTGC 57.364 47.619 0.00 0.00 0.00 4.26
83 84 8.902806 AGTTGACATAGTTTGACTTTGATCAAA 58.097 29.630 19.45 19.45 44.40 2.69
84 85 8.450578 AGTTGACATAGTTTGACTTTGATCAA 57.549 30.769 3.38 3.38 36.80 2.57
85 86 8.450578 AAGTTGACATAGTTTGACTTTGATCA 57.549 30.769 0.00 0.00 32.57 2.92
88 89 9.997482 GTTAAAGTTGACATAGTTTGACTTTGA 57.003 29.630 8.68 0.12 37.73 2.69
92 93 8.975439 CGTAGTTAAAGTTGACATAGTTTGACT 58.025 33.333 14.08 14.08 39.31 3.41
93 94 8.758715 ACGTAGTTAAAGTTGACATAGTTTGAC 58.241 33.333 0.00 0.00 37.78 3.18
94 95 8.876275 ACGTAGTTAAAGTTGACATAGTTTGA 57.124 30.769 0.00 0.00 37.78 2.69
193 194 9.982651 GAGGAAGTACAATACAAAGCTATATGA 57.017 33.333 0.00 0.00 0.00 2.15
194 195 9.209175 GGAGGAAGTACAATACAAAGCTATATG 57.791 37.037 0.00 0.00 0.00 1.78
195 196 8.088981 CGGAGGAAGTACAATACAAAGCTATAT 58.911 37.037 0.00 0.00 0.00 0.86
196 197 7.069085 ACGGAGGAAGTACAATACAAAGCTATA 59.931 37.037 0.00 0.00 0.00 1.31
197 198 6.127140 ACGGAGGAAGTACAATACAAAGCTAT 60.127 38.462 0.00 0.00 0.00 2.97
198 199 5.186409 ACGGAGGAAGTACAATACAAAGCTA 59.814 40.000 0.00 0.00 0.00 3.32
199 200 4.020485 ACGGAGGAAGTACAATACAAAGCT 60.020 41.667 0.00 0.00 0.00 3.74
200 201 4.251268 ACGGAGGAAGTACAATACAAAGC 58.749 43.478 0.00 0.00 0.00 3.51
201 202 6.649557 AGAAACGGAGGAAGTACAATACAAAG 59.350 38.462 0.00 0.00 0.00 2.77
202 203 6.527423 AGAAACGGAGGAAGTACAATACAAA 58.473 36.000 0.00 0.00 0.00 2.83
203 204 6.105397 AGAAACGGAGGAAGTACAATACAA 57.895 37.500 0.00 0.00 0.00 2.41
204 205 5.733620 AGAAACGGAGGAAGTACAATACA 57.266 39.130 0.00 0.00 0.00 2.29
205 206 8.713737 ATTTAGAAACGGAGGAAGTACAATAC 57.286 34.615 0.00 0.00 0.00 1.89
212 213 8.979534 AGACTTATATTTAGAAACGGAGGAAGT 58.020 33.333 0.00 0.00 0.00 3.01
213 214 9.819267 AAGACTTATATTTAGAAACGGAGGAAG 57.181 33.333 0.00 0.00 0.00 3.46
218 219 9.947433 TCCAAAAGACTTATATTTAGAAACGGA 57.053 29.630 0.00 0.00 0.00 4.69
236 237 9.838339 GGTCTATAATGAAATCTCTCCAAAAGA 57.162 33.333 0.00 0.00 0.00 2.52
237 238 9.618890 TGGTCTATAATGAAATCTCTCCAAAAG 57.381 33.333 0.00 0.00 0.00 2.27
238 239 9.396022 GTGGTCTATAATGAAATCTCTCCAAAA 57.604 33.333 0.00 0.00 0.00 2.44
239 240 8.548025 TGTGGTCTATAATGAAATCTCTCCAAA 58.452 33.333 0.00 0.00 0.00 3.28
240 241 8.089625 TGTGGTCTATAATGAAATCTCTCCAA 57.910 34.615 0.00 0.00 0.00 3.53
241 242 7.675161 TGTGGTCTATAATGAAATCTCTCCA 57.325 36.000 0.00 0.00 0.00 3.86
242 243 9.646427 GTATGTGGTCTATAATGAAATCTCTCC 57.354 37.037 0.00 0.00 0.00 3.71
243 244 9.347934 CGTATGTGGTCTATAATGAAATCTCTC 57.652 37.037 0.00 0.00 0.00 3.20
244 245 8.307483 CCGTATGTGGTCTATAATGAAATCTCT 58.693 37.037 0.00 0.00 0.00 3.10
245 246 8.304596 TCCGTATGTGGTCTATAATGAAATCTC 58.695 37.037 0.00 0.00 0.00 2.75
246 247 8.190326 TCCGTATGTGGTCTATAATGAAATCT 57.810 34.615 0.00 0.00 0.00 2.40
247 248 7.063544 GCTCCGTATGTGGTCTATAATGAAATC 59.936 40.741 0.00 0.00 0.00 2.17
248 249 6.874134 GCTCCGTATGTGGTCTATAATGAAAT 59.126 38.462 0.00 0.00 0.00 2.17
249 250 6.183360 TGCTCCGTATGTGGTCTATAATGAAA 60.183 38.462 0.00 0.00 0.00 2.69
250 251 5.303333 TGCTCCGTATGTGGTCTATAATGAA 59.697 40.000 0.00 0.00 0.00 2.57
251 252 4.830600 TGCTCCGTATGTGGTCTATAATGA 59.169 41.667 0.00 0.00 0.00 2.57
252 253 5.134202 TGCTCCGTATGTGGTCTATAATG 57.866 43.478 0.00 0.00 0.00 1.90
253 254 5.801531 TTGCTCCGTATGTGGTCTATAAT 57.198 39.130 0.00 0.00 0.00 1.28
254 255 5.601583 TTTGCTCCGTATGTGGTCTATAA 57.398 39.130 0.00 0.00 0.00 0.98
255 256 5.601583 TTTTGCTCCGTATGTGGTCTATA 57.398 39.130 0.00 0.00 0.00 1.31
256 257 4.481368 TTTTGCTCCGTATGTGGTCTAT 57.519 40.909 0.00 0.00 0.00 1.98
257 258 3.965379 TTTTGCTCCGTATGTGGTCTA 57.035 42.857 0.00 0.00 0.00 2.59
258 259 2.851263 TTTTGCTCCGTATGTGGTCT 57.149 45.000 0.00 0.00 0.00 3.85
259 260 5.554822 TTTATTTTGCTCCGTATGTGGTC 57.445 39.130 0.00 0.00 0.00 4.02
260 261 5.650266 TCATTTATTTTGCTCCGTATGTGGT 59.350 36.000 0.00 0.00 0.00 4.16
261 262 6.130298 TCATTTATTTTGCTCCGTATGTGG 57.870 37.500 0.00 0.00 0.00 4.17
262 263 8.131100 AGATTCATTTATTTTGCTCCGTATGTG 58.869 33.333 0.00 0.00 0.00 3.21
263 264 8.225603 AGATTCATTTATTTTGCTCCGTATGT 57.774 30.769 0.00 0.00 0.00 2.29
264 265 9.599322 GTAGATTCATTTATTTTGCTCCGTATG 57.401 33.333 0.00 0.00 0.00 2.39
265 266 9.337396 TGTAGATTCATTTATTTTGCTCCGTAT 57.663 29.630 0.00 0.00 0.00 3.06
266 267 8.609176 GTGTAGATTCATTTATTTTGCTCCGTA 58.391 33.333 0.00 0.00 0.00 4.02
267 268 7.336931 AGTGTAGATTCATTTATTTTGCTCCGT 59.663 33.333 0.00 0.00 0.00 4.69
268 269 7.697691 AGTGTAGATTCATTTATTTTGCTCCG 58.302 34.615 0.00 0.00 0.00 4.63
269 270 8.897752 AGAGTGTAGATTCATTTATTTTGCTCC 58.102 33.333 0.00 0.00 0.00 4.70
280 281 9.624373 AGATGCATTTTAGAGTGTAGATTCATT 57.376 29.630 0.00 0.00 0.00 2.57
301 302 9.613957 GGATCACATACGTATGTATATAGATGC 57.386 37.037 34.24 29.68 44.57 3.91
315 316 8.861086 AGAGATTTTACTATGGATCACATACGT 58.139 33.333 0.00 0.00 41.03 3.57
342 343 9.774413 CCTCCGTTCCTAAATATAAGTTATTGT 57.226 33.333 0.00 0.00 0.00 2.71
343 344 9.991906 TCCTCCGTTCCTAAATATAAGTTATTG 57.008 33.333 0.00 0.00 0.00 1.90
346 347 9.205513 ACTTCCTCCGTTCCTAAATATAAGTTA 57.794 33.333 0.00 0.00 0.00 2.24
347 348 8.087303 ACTTCCTCCGTTCCTAAATATAAGTT 57.913 34.615 0.00 0.00 0.00 2.66
348 349 7.672122 ACTTCCTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
349 350 9.075678 TCTACTTCCTCCGTTCCTAAATATAAG 57.924 37.037 0.00 0.00 0.00 1.73
350 351 9.597681 ATCTACTTCCTCCGTTCCTAAATATAA 57.402 33.333 0.00 0.00 0.00 0.98
351 352 9.021807 CATCTACTTCCTCCGTTCCTAAATATA 57.978 37.037 0.00 0.00 0.00 0.86
352 353 7.509659 ACATCTACTTCCTCCGTTCCTAAATAT 59.490 37.037 0.00 0.00 0.00 1.28
353 354 6.837568 ACATCTACTTCCTCCGTTCCTAAATA 59.162 38.462 0.00 0.00 0.00 1.40
354 355 5.661759 ACATCTACTTCCTCCGTTCCTAAAT 59.338 40.000 0.00 0.00 0.00 1.40
355 356 5.021458 ACATCTACTTCCTCCGTTCCTAAA 58.979 41.667 0.00 0.00 0.00 1.85
356 357 4.607239 ACATCTACTTCCTCCGTTCCTAA 58.393 43.478 0.00 0.00 0.00 2.69
357 358 4.246712 ACATCTACTTCCTCCGTTCCTA 57.753 45.455 0.00 0.00 0.00 2.94
358 359 3.103080 ACATCTACTTCCTCCGTTCCT 57.897 47.619 0.00 0.00 0.00 3.36
359 360 3.889520 AACATCTACTTCCTCCGTTCC 57.110 47.619 0.00 0.00 0.00 3.62
360 361 9.543783 AAATATTAACATCTACTTCCTCCGTTC 57.456 33.333 0.00 0.00 0.00 3.95
361 362 9.901172 AAAATATTAACATCTACTTCCTCCGTT 57.099 29.630 0.00 0.00 0.00 4.44
362 363 9.901172 AAAAATATTAACATCTACTTCCTCCGT 57.099 29.630 0.00 0.00 0.00 4.69
398 399 9.783081 ACTATCTTCGTTTAAAAGTTTCCCTAA 57.217 29.630 1.02 0.00 0.00 2.69
400 401 9.433153 CTACTATCTTCGTTTAAAAGTTTCCCT 57.567 33.333 1.02 0.00 0.00 4.20
401 402 9.212641 ACTACTATCTTCGTTTAAAAGTTTCCC 57.787 33.333 1.02 0.00 0.00 3.97
412 413 9.323985 AGTACGAATCTACTACTATCTTCGTTT 57.676 33.333 12.51 1.28 44.19 3.60
413 414 8.885494 AGTACGAATCTACTACTATCTTCGTT 57.115 34.615 12.51 0.00 44.19 3.85
414 415 9.405587 GTAGTACGAATCTACTACTATCTTCGT 57.594 37.037 15.98 12.03 46.96 3.85
415 416 8.859156 GGTAGTACGAATCTACTACTATCTTCG 58.141 40.741 19.47 7.69 44.61 3.79
416 417 9.703892 TGGTAGTACGAATCTACTACTATCTTC 57.296 37.037 19.47 9.79 44.61 2.87
418 419 9.656040 CATGGTAGTACGAATCTACTACTATCT 57.344 37.037 19.47 6.74 43.90 1.98
419 420 8.881743 CCATGGTAGTACGAATCTACTACTATC 58.118 40.741 19.47 5.97 43.90 2.08
420 421 8.381636 ACCATGGTAGTACGAATCTACTACTAT 58.618 37.037 18.10 17.60 45.35 2.12
421 422 7.739825 ACCATGGTAGTACGAATCTACTACTA 58.260 38.462 18.10 16.67 44.61 1.82
422 423 6.599445 ACCATGGTAGTACGAATCTACTACT 58.401 40.000 18.10 3.70 44.61 2.57
423 424 6.709846 AGACCATGGTAGTACGAATCTACTAC 59.290 42.308 19.80 15.41 44.54 2.73
424 425 6.709397 CAGACCATGGTAGTACGAATCTACTA 59.291 42.308 19.80 9.29 38.16 1.82
425 426 5.531659 CAGACCATGGTAGTACGAATCTACT 59.468 44.000 19.80 2.39 38.16 2.57
426 427 5.278364 CCAGACCATGGTAGTACGAATCTAC 60.278 48.000 19.80 0.00 44.91 2.59
427 428 4.825634 CCAGACCATGGTAGTACGAATCTA 59.174 45.833 19.80 0.00 44.91 1.98
428 429 3.637229 CCAGACCATGGTAGTACGAATCT 59.363 47.826 19.80 4.03 44.91 2.40
429 430 3.978687 CCAGACCATGGTAGTACGAATC 58.021 50.000 19.80 1.30 44.91 2.52
470 471 3.396570 CTAAACCCCGGGTCCGCT 61.397 66.667 21.85 1.03 33.12 5.52
472 473 2.580815 GTCTAAACCCCGGGTCCG 59.419 66.667 21.85 6.73 33.12 4.79
492 493 1.227823 CTGACGTGGGAGCAACCAA 60.228 57.895 0.00 0.00 43.34 3.67
541 544 1.519751 TTGCCACCGTTGTACATGCC 61.520 55.000 0.00 0.00 0.00 4.40
542 545 0.525761 ATTGCCACCGTTGTACATGC 59.474 50.000 0.00 0.00 0.00 4.06
543 546 2.096819 GGTATTGCCACCGTTGTACATG 59.903 50.000 0.00 0.00 37.17 3.21
544 547 2.290387 TGGTATTGCCACCGTTGTACAT 60.290 45.455 0.00 0.00 43.61 2.29
545 548 1.071857 TGGTATTGCCACCGTTGTACA 59.928 47.619 0.00 0.00 43.61 2.90
546 549 1.810959 TGGTATTGCCACCGTTGTAC 58.189 50.000 0.00 0.00 43.61 2.90
563 566 2.684001 TACATGAGGCTACCGTTTGG 57.316 50.000 0.00 0.00 42.84 3.28
564 567 2.287915 GCATACATGAGGCTACCGTTTG 59.712 50.000 0.00 0.00 0.00 2.93
565 568 2.093181 TGCATACATGAGGCTACCGTTT 60.093 45.455 0.00 0.00 35.30 3.60
566 569 1.484653 TGCATACATGAGGCTACCGTT 59.515 47.619 0.00 0.00 35.30 4.44
567 570 1.119684 TGCATACATGAGGCTACCGT 58.880 50.000 0.00 0.00 35.30 4.83
568 571 2.462456 ATGCATACATGAGGCTACCG 57.538 50.000 0.00 0.00 35.30 4.02
578 581 4.988540 ACGACTTTATACGCATGCATACAT 59.011 37.500 19.57 7.00 36.79 2.29
579 582 4.364860 ACGACTTTATACGCATGCATACA 58.635 39.130 19.57 0.00 0.00 2.29
580 583 4.966850 ACGACTTTATACGCATGCATAC 57.033 40.909 19.57 0.00 0.00 2.39
581 584 5.575218 CCATACGACTTTATACGCATGCATA 59.425 40.000 19.57 7.36 33.62 3.14
582 585 4.388773 CCATACGACTTTATACGCATGCAT 59.611 41.667 19.57 4.54 33.62 3.96
583 586 3.738791 CCATACGACTTTATACGCATGCA 59.261 43.478 19.57 0.00 33.62 3.96
584 587 3.985279 TCCATACGACTTTATACGCATGC 59.015 43.478 7.91 7.91 33.62 4.06
585 588 4.090066 GCTCCATACGACTTTATACGCATG 59.910 45.833 0.00 0.00 34.39 4.06
586 589 4.235360 GCTCCATACGACTTTATACGCAT 58.765 43.478 0.00 0.00 0.00 4.73
587 590 3.067040 TGCTCCATACGACTTTATACGCA 59.933 43.478 0.00 0.00 0.00 5.24
588 591 3.635331 TGCTCCATACGACTTTATACGC 58.365 45.455 0.00 0.00 0.00 4.42
589 592 3.669122 GCTGCTCCATACGACTTTATACG 59.331 47.826 0.00 0.00 0.00 3.06
590 593 4.872664 AGCTGCTCCATACGACTTTATAC 58.127 43.478 0.00 0.00 0.00 1.47
591 594 6.659668 AGATAGCTGCTCCATACGACTTTATA 59.340 38.462 4.91 0.00 0.00 0.98
592 595 5.478679 AGATAGCTGCTCCATACGACTTTAT 59.521 40.000 4.91 0.00 0.00 1.40
593 596 4.827835 AGATAGCTGCTCCATACGACTTTA 59.172 41.667 4.91 0.00 0.00 1.85
594 597 3.639094 AGATAGCTGCTCCATACGACTTT 59.361 43.478 4.91 0.00 0.00 2.66
595 598 3.226777 AGATAGCTGCTCCATACGACTT 58.773 45.455 4.91 0.00 0.00 3.01
596 599 2.870175 AGATAGCTGCTCCATACGACT 58.130 47.619 4.91 0.00 0.00 4.18
597 600 4.439426 CCATAGATAGCTGCTCCATACGAC 60.439 50.000 4.91 0.00 0.00 4.34
598 601 3.696548 CCATAGATAGCTGCTCCATACGA 59.303 47.826 4.91 0.00 0.00 3.43
599 602 3.181482 CCCATAGATAGCTGCTCCATACG 60.181 52.174 4.91 0.00 0.00 3.06
600 603 4.026744 TCCCATAGATAGCTGCTCCATAC 58.973 47.826 4.91 0.00 0.00 2.39
601 604 4.285020 CTCCCATAGATAGCTGCTCCATA 58.715 47.826 4.91 0.00 0.00 2.74
602 605 3.106054 CTCCCATAGATAGCTGCTCCAT 58.894 50.000 4.91 0.00 0.00 3.41
603 606 2.533916 CTCCCATAGATAGCTGCTCCA 58.466 52.381 4.91 0.00 0.00 3.86
604 607 1.206849 GCTCCCATAGATAGCTGCTCC 59.793 57.143 4.91 0.00 33.40 4.70
605 608 1.898472 TGCTCCCATAGATAGCTGCTC 59.102 52.381 4.91 0.00 37.16 4.26
606 609 2.021262 TGCTCCCATAGATAGCTGCT 57.979 50.000 7.57 7.57 37.16 4.24
607 610 2.630158 CATGCTCCCATAGATAGCTGC 58.370 52.381 0.00 0.00 37.16 5.25
608 611 2.836372 TCCATGCTCCCATAGATAGCTG 59.164 50.000 0.00 0.00 37.16 4.24
609 612 3.196415 TCCATGCTCCCATAGATAGCT 57.804 47.619 0.00 0.00 37.16 3.32
610 613 3.604582 GTTCCATGCTCCCATAGATAGC 58.395 50.000 0.00 0.00 36.77 2.97
611 614 3.584406 TGGTTCCATGCTCCCATAGATAG 59.416 47.826 0.00 0.00 0.00 2.08
612 615 3.597182 TGGTTCCATGCTCCCATAGATA 58.403 45.455 0.00 0.00 0.00 1.98
613 616 2.421725 TGGTTCCATGCTCCCATAGAT 58.578 47.619 0.00 0.00 0.00 1.98
614 617 1.891933 TGGTTCCATGCTCCCATAGA 58.108 50.000 0.00 0.00 0.00 1.98
615 618 2.301346 GTTGGTTCCATGCTCCCATAG 58.699 52.381 0.00 0.00 0.00 2.23
616 619 1.408127 CGTTGGTTCCATGCTCCCATA 60.408 52.381 0.00 0.00 0.00 2.74
617 620 0.680921 CGTTGGTTCCATGCTCCCAT 60.681 55.000 0.00 0.00 0.00 4.00
618 621 1.303236 CGTTGGTTCCATGCTCCCA 60.303 57.895 0.00 0.00 0.00 4.37
619 622 2.046285 CCGTTGGTTCCATGCTCCC 61.046 63.158 0.00 0.00 0.00 4.30
620 623 0.608035 TTCCGTTGGTTCCATGCTCC 60.608 55.000 0.00 0.00 0.00 4.70
621 624 0.804989 CTTCCGTTGGTTCCATGCTC 59.195 55.000 0.00 0.00 0.00 4.26
622 625 1.244019 GCTTCCGTTGGTTCCATGCT 61.244 55.000 0.00 0.00 0.00 3.79
623 626 1.212751 GCTTCCGTTGGTTCCATGC 59.787 57.895 0.00 0.00 0.00 4.06
624 627 0.523072 CTGCTTCCGTTGGTTCCATG 59.477 55.000 0.00 0.00 0.00 3.66
625 628 1.244019 GCTGCTTCCGTTGGTTCCAT 61.244 55.000 0.00 0.00 0.00 3.41
626 629 1.896660 GCTGCTTCCGTTGGTTCCA 60.897 57.895 0.00 0.00 0.00 3.53
627 630 1.856265 CTGCTGCTTCCGTTGGTTCC 61.856 60.000 0.00 0.00 0.00 3.62
628 631 1.576421 CTGCTGCTTCCGTTGGTTC 59.424 57.895 0.00 0.00 0.00 3.62
629 632 2.555547 GCTGCTGCTTCCGTTGGTT 61.556 57.895 8.53 0.00 36.03 3.67
630 633 2.980233 GCTGCTGCTTCCGTTGGT 60.980 61.111 8.53 0.00 36.03 3.67
631 634 4.093952 CGCTGCTGCTTCCGTTGG 62.094 66.667 14.03 0.00 36.97 3.77
632 635 4.748679 GCGCTGCTGCTTCCGTTG 62.749 66.667 14.03 0.00 36.97 4.10
650 653 4.039092 CTGGTGAGTGGCCCCAGG 62.039 72.222 15.31 0.00 41.69 4.45
651 654 4.729918 GCTGGTGAGTGGCCCCAG 62.730 72.222 18.02 18.02 46.91 4.45
653 656 3.513750 AAAGCTGGTGAGTGGCCCC 62.514 63.158 0.00 0.00 0.00 5.80
654 657 1.527433 GAAAAGCTGGTGAGTGGCCC 61.527 60.000 0.00 0.00 0.00 5.80
655 658 1.527433 GGAAAAGCTGGTGAGTGGCC 61.527 60.000 0.00 0.00 0.00 5.36
656 659 0.538287 AGGAAAAGCTGGTGAGTGGC 60.538 55.000 0.00 0.00 0.00 5.01
657 660 1.242076 CAGGAAAAGCTGGTGAGTGG 58.758 55.000 0.00 0.00 0.00 4.00
658 661 1.972872 ACAGGAAAAGCTGGTGAGTG 58.027 50.000 0.00 0.00 0.00 3.51
659 662 2.173569 AGAACAGGAAAAGCTGGTGAGT 59.826 45.455 0.00 0.00 0.00 3.41
660 663 2.856222 AGAACAGGAAAAGCTGGTGAG 58.144 47.619 0.00 0.00 0.00 3.51
661 664 3.297134 AAGAACAGGAAAAGCTGGTGA 57.703 42.857 0.00 0.00 0.00 4.02
662 665 4.098501 AGAAAAGAACAGGAAAAGCTGGTG 59.901 41.667 0.00 0.00 0.00 4.17
663 666 4.281657 AGAAAAGAACAGGAAAAGCTGGT 58.718 39.130 0.00 0.00 0.00 4.00
664 667 4.926140 AGAAAAGAACAGGAAAAGCTGG 57.074 40.909 0.00 0.00 0.00 4.85
665 668 5.750547 GGAAAGAAAAGAACAGGAAAAGCTG 59.249 40.000 0.00 0.00 0.00 4.24
666 669 5.163405 GGGAAAGAAAAGAACAGGAAAAGCT 60.163 40.000 0.00 0.00 0.00 3.74
667 670 5.050490 GGGAAAGAAAAGAACAGGAAAAGC 58.950 41.667 0.00 0.00 0.00 3.51
668 671 6.096846 TGAGGGAAAGAAAAGAACAGGAAAAG 59.903 38.462 0.00 0.00 0.00 2.27
669 672 5.955355 TGAGGGAAAGAAAAGAACAGGAAAA 59.045 36.000 0.00 0.00 0.00 2.29
670 673 5.515106 TGAGGGAAAGAAAAGAACAGGAAA 58.485 37.500 0.00 0.00 0.00 3.13
671 674 5.124036 TGAGGGAAAGAAAAGAACAGGAA 57.876 39.130 0.00 0.00 0.00 3.36
672 675 4.788925 TGAGGGAAAGAAAAGAACAGGA 57.211 40.909 0.00 0.00 0.00 3.86
673 676 5.852282 TTTGAGGGAAAGAAAAGAACAGG 57.148 39.130 0.00 0.00 0.00 4.00
674 677 7.042797 TCATTTGAGGGAAAGAAAAGAACAG 57.957 36.000 0.00 0.00 0.00 3.16
675 678 6.461509 GCTCATTTGAGGGAAAGAAAAGAACA 60.462 38.462 9.49 0.00 42.29 3.18
676 679 5.923114 GCTCATTTGAGGGAAAGAAAAGAAC 59.077 40.000 9.49 0.00 42.29 3.01
677 680 5.835280 AGCTCATTTGAGGGAAAGAAAAGAA 59.165 36.000 9.49 0.00 42.29 2.52
678 681 5.388654 AGCTCATTTGAGGGAAAGAAAAGA 58.611 37.500 9.49 0.00 42.29 2.52
679 682 5.242393 TGAGCTCATTTGAGGGAAAGAAAAG 59.758 40.000 13.74 0.00 42.29 2.27
680 683 5.139727 TGAGCTCATTTGAGGGAAAGAAAA 58.860 37.500 13.74 0.00 42.29 2.29
681 684 4.728772 TGAGCTCATTTGAGGGAAAGAAA 58.271 39.130 13.74 0.00 42.29 2.52
682 685 4.371624 TGAGCTCATTTGAGGGAAAGAA 57.628 40.909 13.74 0.00 42.29 2.52
683 686 4.074970 GTTGAGCTCATTTGAGGGAAAGA 58.925 43.478 19.04 0.00 42.29 2.52
684 687 3.192212 GGTTGAGCTCATTTGAGGGAAAG 59.808 47.826 19.04 0.00 42.29 2.62
685 688 3.157087 GGTTGAGCTCATTTGAGGGAAA 58.843 45.455 19.04 0.00 42.29 3.13
686 689 2.555227 GGGTTGAGCTCATTTGAGGGAA 60.555 50.000 19.04 0.00 42.29 3.97
687 690 1.004745 GGGTTGAGCTCATTTGAGGGA 59.995 52.381 19.04 0.00 42.29 4.20
688 691 1.005215 AGGGTTGAGCTCATTTGAGGG 59.995 52.381 19.04 0.00 42.29 4.30
689 692 2.026449 AGAGGGTTGAGCTCATTTGAGG 60.026 50.000 19.04 0.00 42.29 3.86
690 693 3.055240 AGAGAGGGTTGAGCTCATTTGAG 60.055 47.826 19.04 3.13 44.75 3.02
691 694 2.909006 AGAGAGGGTTGAGCTCATTTGA 59.091 45.455 19.04 0.00 0.00 2.69
692 695 3.008330 CAGAGAGGGTTGAGCTCATTTG 58.992 50.000 19.04 2.95 0.00 2.32
693 696 2.026449 CCAGAGAGGGTTGAGCTCATTT 60.026 50.000 19.04 3.27 0.00 2.32
694 697 1.558756 CCAGAGAGGGTTGAGCTCATT 59.441 52.381 19.04 3.66 0.00 2.57
695 698 1.202330 CCAGAGAGGGTTGAGCTCAT 58.798 55.000 19.04 1.31 0.00 2.90
696 699 1.548357 GCCAGAGAGGGTTGAGCTCA 61.548 60.000 13.74 13.74 38.09 4.26
697 700 1.220477 GCCAGAGAGGGTTGAGCTC 59.780 63.158 6.82 6.82 38.09 4.09
698 701 3.397906 GCCAGAGAGGGTTGAGCT 58.602 61.111 0.00 0.00 38.09 4.09
705 708 0.105555 AGAGGATGAGCCAGAGAGGG 60.106 60.000 0.00 0.00 40.02 4.30
706 709 1.133388 AGAGAGGATGAGCCAGAGAGG 60.133 57.143 0.00 0.00 40.02 3.69
707 710 2.158564 AGAGAGAGGATGAGCCAGAGAG 60.159 54.545 0.00 0.00 40.02 3.20
708 711 1.852309 AGAGAGAGGATGAGCCAGAGA 59.148 52.381 0.00 0.00 40.02 3.10
709 712 2.158564 AGAGAGAGAGGATGAGCCAGAG 60.159 54.545 0.00 0.00 40.02 3.35
710 713 1.852309 AGAGAGAGAGGATGAGCCAGA 59.148 52.381 0.00 0.00 40.02 3.86
711 714 2.233271 GAGAGAGAGAGGATGAGCCAG 58.767 57.143 0.00 0.00 40.02 4.85
712 715 1.133513 GGAGAGAGAGAGGATGAGCCA 60.134 57.143 0.00 0.00 40.02 4.75
713 716 1.145738 AGGAGAGAGAGAGGATGAGCC 59.854 57.143 0.00 0.00 0.00 4.70
714 717 2.158623 TGAGGAGAGAGAGAGGATGAGC 60.159 54.545 0.00 0.00 0.00 4.26
715 718 3.137176 AGTGAGGAGAGAGAGAGGATGAG 59.863 52.174 0.00 0.00 0.00 2.90
716 719 3.122480 AGTGAGGAGAGAGAGAGGATGA 58.878 50.000 0.00 0.00 0.00 2.92
717 720 3.582998 AGTGAGGAGAGAGAGAGGATG 57.417 52.381 0.00 0.00 0.00 3.51
718 721 4.230502 AGAAAGTGAGGAGAGAGAGAGGAT 59.769 45.833 0.00 0.00 0.00 3.24
719 722 3.591527 AGAAAGTGAGGAGAGAGAGAGGA 59.408 47.826 0.00 0.00 0.00 3.71
720 723 3.968265 AGAAAGTGAGGAGAGAGAGAGG 58.032 50.000 0.00 0.00 0.00 3.69
721 724 5.713025 CAAAGAAAGTGAGGAGAGAGAGAG 58.287 45.833 0.00 0.00 0.00 3.20
722 725 4.021544 GCAAAGAAAGTGAGGAGAGAGAGA 60.022 45.833 0.00 0.00 0.00 3.10
723 726 4.021192 AGCAAAGAAAGTGAGGAGAGAGAG 60.021 45.833 0.00 0.00 0.00 3.20
724 727 3.900601 AGCAAAGAAAGTGAGGAGAGAGA 59.099 43.478 0.00 0.00 0.00 3.10
725 728 4.270245 AGCAAAGAAAGTGAGGAGAGAG 57.730 45.455 0.00 0.00 0.00 3.20
726 729 4.696479 AAGCAAAGAAAGTGAGGAGAGA 57.304 40.909 0.00 0.00 0.00 3.10
727 730 7.173907 TCAATAAAGCAAAGAAAGTGAGGAGAG 59.826 37.037 0.00 0.00 0.00 3.20
728 731 6.998074 TCAATAAAGCAAAGAAAGTGAGGAGA 59.002 34.615 0.00 0.00 0.00 3.71
729 732 7.206981 TCAATAAAGCAAAGAAAGTGAGGAG 57.793 36.000 0.00 0.00 0.00 3.69
730 733 7.309377 CCATCAATAAAGCAAAGAAAGTGAGGA 60.309 37.037 0.00 0.00 0.00 3.71
731 734 6.810182 CCATCAATAAAGCAAAGAAAGTGAGG 59.190 38.462 0.00 0.00 0.00 3.86
732 735 7.596494 TCCATCAATAAAGCAAAGAAAGTGAG 58.404 34.615 0.00 0.00 0.00 3.51
733 736 7.523293 TCCATCAATAAAGCAAAGAAAGTGA 57.477 32.000 0.00 0.00 0.00 3.41
734 737 6.309737 GCTCCATCAATAAAGCAAAGAAAGTG 59.690 38.462 0.00 0.00 34.86 3.16
735 738 6.393171 GCTCCATCAATAAAGCAAAGAAAGT 58.607 36.000 0.00 0.00 34.86 2.66
736 739 5.514204 CGCTCCATCAATAAAGCAAAGAAAG 59.486 40.000 0.00 0.00 34.39 2.62
737 740 5.401550 CGCTCCATCAATAAAGCAAAGAAA 58.598 37.500 0.00 0.00 34.39 2.52
738 741 4.675146 GCGCTCCATCAATAAAGCAAAGAA 60.675 41.667 0.00 0.00 34.39 2.52
739 742 3.181497 GCGCTCCATCAATAAAGCAAAGA 60.181 43.478 0.00 0.00 34.39 2.52
740 743 3.111098 GCGCTCCATCAATAAAGCAAAG 58.889 45.455 0.00 0.00 34.39 2.77
741 744 2.159254 GGCGCTCCATCAATAAAGCAAA 60.159 45.455 7.64 0.00 34.39 3.68
742 745 1.405105 GGCGCTCCATCAATAAAGCAA 59.595 47.619 7.64 0.00 34.39 3.91
743 746 1.024271 GGCGCTCCATCAATAAAGCA 58.976 50.000 7.64 0.00 34.39 3.91
744 747 1.312815 AGGCGCTCCATCAATAAAGC 58.687 50.000 7.64 0.00 33.74 3.51
745 748 2.808543 GGTAGGCGCTCCATCAATAAAG 59.191 50.000 7.64 0.00 33.74 1.85
746 749 2.438021 AGGTAGGCGCTCCATCAATAAA 59.562 45.455 7.64 0.00 33.74 1.40
747 750 2.037251 GAGGTAGGCGCTCCATCAATAA 59.963 50.000 7.64 0.00 33.74 1.40
748 751 1.618837 GAGGTAGGCGCTCCATCAATA 59.381 52.381 7.64 0.00 33.74 1.90
749 752 0.394565 GAGGTAGGCGCTCCATCAAT 59.605 55.000 7.64 0.00 33.74 2.57
750 753 1.686325 GGAGGTAGGCGCTCCATCAA 61.686 60.000 7.64 0.00 34.36 2.57
751 754 2.134287 GGAGGTAGGCGCTCCATCA 61.134 63.158 7.64 0.00 34.36 3.07
752 755 1.811645 GAGGAGGTAGGCGCTCCATC 61.812 65.000 14.34 6.52 35.71 3.51
753 756 1.834822 GAGGAGGTAGGCGCTCCAT 60.835 63.158 14.34 0.73 35.71 3.41
754 757 2.442272 GAGGAGGTAGGCGCTCCA 60.442 66.667 14.34 0.00 35.71 3.86
755 758 2.123640 AGAGGAGGTAGGCGCTCC 60.124 66.667 7.64 5.83 34.39 4.70
756 759 3.124686 CAGAGGAGGTAGGCGCTC 58.875 66.667 7.64 0.00 0.00 5.03
757 760 3.151022 GCAGAGGAGGTAGGCGCT 61.151 66.667 7.64 0.00 0.00 5.92
758 761 2.914777 CTTGCAGAGGAGGTAGGCGC 62.915 65.000 0.00 0.00 0.00 6.53
759 762 1.142748 CTTGCAGAGGAGGTAGGCG 59.857 63.158 0.00 0.00 0.00 5.52
760 763 0.463620 CTCTTGCAGAGGAGGTAGGC 59.536 60.000 5.54 0.00 38.67 3.93
769 772 1.151668 CCAAACGACCTCTTGCAGAG 58.848 55.000 0.00 6.28 41.96 3.35
770 773 0.250295 CCCAAACGACCTCTTGCAGA 60.250 55.000 0.00 0.00 0.00 4.26
771 774 0.535102 ACCCAAACGACCTCTTGCAG 60.535 55.000 0.00 0.00 0.00 4.41
772 775 0.534203 GACCCAAACGACCTCTTGCA 60.534 55.000 0.00 0.00 0.00 4.08
773 776 0.250338 AGACCCAAACGACCTCTTGC 60.250 55.000 0.00 0.00 0.00 4.01
774 777 1.512926 CAGACCCAAACGACCTCTTG 58.487 55.000 0.00 0.00 0.00 3.02
775 778 0.250338 GCAGACCCAAACGACCTCTT 60.250 55.000 0.00 0.00 0.00 2.85
776 779 1.371558 GCAGACCCAAACGACCTCT 59.628 57.895 0.00 0.00 0.00 3.69
777 780 0.951040 CTGCAGACCCAAACGACCTC 60.951 60.000 8.42 0.00 0.00 3.85
778 781 1.071471 CTGCAGACCCAAACGACCT 59.929 57.895 8.42 0.00 0.00 3.85
779 782 1.966451 CCTGCAGACCCAAACGACC 60.966 63.158 17.39 0.00 0.00 4.79
780 783 2.617274 GCCTGCAGACCCAAACGAC 61.617 63.158 17.39 0.00 0.00 4.34
781 784 2.281484 GCCTGCAGACCCAAACGA 60.281 61.111 17.39 0.00 0.00 3.85
782 785 2.594303 TGCCTGCAGACCCAAACG 60.594 61.111 17.39 0.00 0.00 3.60
783 786 0.250727 TACTGCCTGCAGACCCAAAC 60.251 55.000 24.88 0.00 46.30 2.93
784 787 0.036732 CTACTGCCTGCAGACCCAAA 59.963 55.000 24.88 3.24 46.30 3.28
785 788 1.127567 ACTACTGCCTGCAGACCCAA 61.128 55.000 24.88 4.81 46.30 4.12
786 789 1.536418 ACTACTGCCTGCAGACCCA 60.536 57.895 24.88 8.36 46.30 4.51
787 790 1.219393 GACTACTGCCTGCAGACCC 59.781 63.158 24.88 3.53 46.30 4.46
788 791 0.610687 AAGACTACTGCCTGCAGACC 59.389 55.000 24.88 6.33 46.30 3.85
789 792 2.464157 AAAGACTACTGCCTGCAGAC 57.536 50.000 24.88 3.38 46.30 3.51
790 793 3.492102 AAAAAGACTACTGCCTGCAGA 57.508 42.857 24.88 8.35 46.30 4.26
792 795 4.714632 AGTTAAAAAGACTACTGCCTGCA 58.285 39.130 0.00 0.00 0.00 4.41
793 796 4.143094 CGAGTTAAAAAGACTACTGCCTGC 60.143 45.833 0.00 0.00 0.00 4.85
794 797 5.227908 TCGAGTTAAAAAGACTACTGCCTG 58.772 41.667 0.00 0.00 0.00 4.85
795 798 5.464030 TCGAGTTAAAAAGACTACTGCCT 57.536 39.130 0.00 0.00 0.00 4.75
796 799 6.590677 AGAATCGAGTTAAAAAGACTACTGCC 59.409 38.462 0.00 0.00 0.00 4.85
797 800 7.201453 GGAGAATCGAGTTAAAAAGACTACTGC 60.201 40.741 0.00 0.00 34.37 4.40
798 801 7.813148 TGGAGAATCGAGTTAAAAAGACTACTG 59.187 37.037 0.00 0.00 34.37 2.74
799 802 7.813627 GTGGAGAATCGAGTTAAAAAGACTACT 59.186 37.037 0.00 0.00 34.37 2.57
800 803 7.201333 CGTGGAGAATCGAGTTAAAAAGACTAC 60.201 40.741 0.00 0.00 34.37 2.73
801 804 6.805271 CGTGGAGAATCGAGTTAAAAAGACTA 59.195 38.462 0.00 0.00 34.37 2.59
802 805 5.634020 CGTGGAGAATCGAGTTAAAAAGACT 59.366 40.000 0.00 0.00 34.37 3.24
803 806 5.163982 CCGTGGAGAATCGAGTTAAAAAGAC 60.164 44.000 0.00 0.00 34.37 3.01
804 807 4.927425 CCGTGGAGAATCGAGTTAAAAAGA 59.073 41.667 0.00 0.00 34.37 2.52
805 808 4.435651 GCCGTGGAGAATCGAGTTAAAAAG 60.436 45.833 0.00 0.00 34.37 2.27
806 809 3.434299 GCCGTGGAGAATCGAGTTAAAAA 59.566 43.478 0.00 0.00 34.37 1.94
807 810 2.997986 GCCGTGGAGAATCGAGTTAAAA 59.002 45.455 0.00 0.00 34.37 1.52
808 811 2.028839 TGCCGTGGAGAATCGAGTTAAA 60.029 45.455 0.00 0.00 34.37 1.52
809 812 1.546923 TGCCGTGGAGAATCGAGTTAA 59.453 47.619 0.00 0.00 34.37 2.01
810 813 1.134367 CTGCCGTGGAGAATCGAGTTA 59.866 52.381 0.00 0.00 34.37 2.24
811 814 0.108615 CTGCCGTGGAGAATCGAGTT 60.109 55.000 0.00 0.00 34.37 3.01
812 815 0.965866 TCTGCCGTGGAGAATCGAGT 60.966 55.000 0.00 0.00 34.37 4.18
813 816 0.387202 ATCTGCCGTGGAGAATCGAG 59.613 55.000 0.00 0.00 34.37 4.04
814 817 0.103026 CATCTGCCGTGGAGAATCGA 59.897 55.000 0.00 0.00 34.37 3.59
815 818 0.103026 TCATCTGCCGTGGAGAATCG 59.897 55.000 0.00 0.00 34.37 3.34
816 819 2.540265 ATCATCTGCCGTGGAGAATC 57.460 50.000 0.00 0.00 0.00 2.52
817 820 2.437281 AGAATCATCTGCCGTGGAGAAT 59.563 45.455 0.00 0.00 33.59 2.40
818 821 1.833630 AGAATCATCTGCCGTGGAGAA 59.166 47.619 0.00 0.00 33.59 2.87
819 822 1.410517 GAGAATCATCTGCCGTGGAGA 59.589 52.381 0.00 0.00 35.54 3.71
820 823 1.539929 GGAGAATCATCTGCCGTGGAG 60.540 57.143 0.00 0.00 38.02 3.86
821 824 0.465705 GGAGAATCATCTGCCGTGGA 59.534 55.000 0.00 0.00 38.02 4.02
822 825 0.178767 TGGAGAATCATCTGCCGTGG 59.821 55.000 0.00 0.00 42.91 4.94
823 826 1.667724 GTTGGAGAATCATCTGCCGTG 59.332 52.381 0.00 0.00 42.91 4.94
824 827 1.740380 CGTTGGAGAATCATCTGCCGT 60.740 52.381 0.00 0.00 42.91 5.68
825 828 0.933097 CGTTGGAGAATCATCTGCCG 59.067 55.000 0.00 0.00 42.91 5.69
826 829 1.667724 CACGTTGGAGAATCATCTGCC 59.332 52.381 0.00 0.00 42.91 4.85
827 830 1.667724 CCACGTTGGAGAATCATCTGC 59.332 52.381 0.00 0.00 40.96 4.26
828 831 3.251479 TCCACGTTGGAGAATCATCTG 57.749 47.619 3.02 0.00 42.67 2.90
860 863 3.965539 ATGCTCCACGCTGGACAGC 62.966 63.158 14.08 14.08 42.67 4.40
861 864 1.376424 AATGCTCCACGCTGGACAG 60.376 57.895 3.02 0.00 42.67 3.51
862 865 1.672030 CAATGCTCCACGCTGGACA 60.672 57.895 3.02 7.04 42.67 4.02
863 866 2.401766 CCAATGCTCCACGCTGGAC 61.402 63.158 3.02 2.56 42.67 4.02
864 867 2.046023 CCAATGCTCCACGCTGGA 60.046 61.111 6.57 6.57 45.98 3.86
865 868 3.818787 GCCAATGCTCCACGCTGG 61.819 66.667 0.00 0.00 40.11 4.85
866 869 3.818787 GGCCAATGCTCCACGCTG 61.819 66.667 0.00 0.00 40.11 5.18
867 870 3.650298 ATGGCCAATGCTCCACGCT 62.650 57.895 10.96 0.00 40.11 5.07
868 871 3.142838 ATGGCCAATGCTCCACGC 61.143 61.111 10.96 0.00 37.74 5.34
869 872 2.802792 CATGGCCAATGCTCCACG 59.197 61.111 10.96 0.00 37.74 4.94
887 890 1.541233 CCGATTGCTGCCTACTTAGGG 60.541 57.143 4.44 0.00 43.82 3.53
888 891 1.139058 ACCGATTGCTGCCTACTTAGG 59.861 52.381 0.00 0.00 46.42 2.69
889 892 2.159099 TCACCGATTGCTGCCTACTTAG 60.159 50.000 0.00 0.00 0.00 2.18
890 893 1.828595 TCACCGATTGCTGCCTACTTA 59.171 47.619 0.00 0.00 0.00 2.24
891 894 0.613260 TCACCGATTGCTGCCTACTT 59.387 50.000 0.00 0.00 0.00 2.24
892 895 0.613260 TTCACCGATTGCTGCCTACT 59.387 50.000 0.00 0.00 0.00 2.57
893 896 0.727398 GTTCACCGATTGCTGCCTAC 59.273 55.000 0.00 0.00 0.00 3.18
894 897 0.739462 CGTTCACCGATTGCTGCCTA 60.739 55.000 0.00 0.00 39.56 3.93
895 898 2.034879 CGTTCACCGATTGCTGCCT 61.035 57.895 0.00 0.00 39.56 4.75
896 899 2.480555 CGTTCACCGATTGCTGCC 59.519 61.111 0.00 0.00 39.56 4.85
897 900 2.202349 GCGTTCACCGATTGCTGC 60.202 61.111 0.00 0.00 39.56 5.25
898 901 2.096406 CGCGTTCACCGATTGCTG 59.904 61.111 0.00 0.00 39.56 4.41
899 902 3.118454 CCGCGTTCACCGATTGCT 61.118 61.111 4.92 0.00 39.56 3.91
932 935 0.317269 CAAAGAACACAGGCACAGCG 60.317 55.000 0.00 0.00 0.00 5.18
1223 1240 2.278271 GAGGTAGACGCGAGCAGC 60.278 66.667 15.93 6.38 43.95 5.25
1260 1295 4.722700 GGAGCTTCTTGCCGGGCA 62.723 66.667 19.77 19.77 44.23 5.36
1321 1356 4.777854 TAGAGCGGGGAGGCAGCA 62.778 66.667 0.00 0.00 34.64 4.41
1581 1616 2.747855 GTTCCTTCCGCAGCCTGG 60.748 66.667 0.00 0.00 0.00 4.45
1738 1779 2.044252 TCGAGGCCGAGCTTACCT 60.044 61.111 0.00 3.00 40.30 3.08
2081 2129 8.141268 TCAGAACCATTGAAAATAAAGGACAAC 58.859 33.333 0.00 0.00 0.00 3.32
2139 2188 2.161609 CCCTTCGGATTGCAAGTGTAAC 59.838 50.000 4.94 0.00 0.00 2.50
2220 2269 1.681166 GGCTCTGCAACTGATGGACAT 60.681 52.381 0.00 0.00 0.00 3.06
2241 2290 1.078848 GCAAGCCGGAGTGTGATCT 60.079 57.895 5.05 0.00 0.00 2.75
2333 2382 4.137872 GCGGCGTACTACCAGGCA 62.138 66.667 9.37 0.00 0.00 4.75
2589 2644 1.205460 GGTTTGCCCCCAGGAGTAGA 61.205 60.000 0.00 0.00 33.47 2.59
2906 2976 1.066587 GAAGCTCCCGATCCTCGTG 59.933 63.158 0.00 0.00 38.40 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.