Multiple sequence alignment - TraesCS5B01G236500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G236500 chr5B 100.000 4670 0 0 1 4670 417553582 417548913 0.000000e+00 8624
1 TraesCS5B01G236500 chr5D 94.372 3358 87 33 606 3903 353513877 353510562 0.000000e+00 5060
2 TraesCS5B01G236500 chr5D 94.471 416 20 3 3979 4393 353510409 353509996 5.100000e-179 638
3 TraesCS5B01G236500 chr5D 95.000 160 8 0 4389 4548 353509969 353509810 7.760000e-63 252
4 TraesCS5B01G236500 chr5A 91.576 3763 162 56 220 3889 454438234 454434534 0.000000e+00 5049
5 TraesCS5B01G236500 chr5A 86.905 420 41 7 3974 4393 454434493 454434088 4.260000e-125 459
6 TraesCS5B01G236500 chr5A 90.435 115 11 0 4389 4503 454434061 454433947 8.090000e-33 152


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G236500 chr5B 417548913 417553582 4669 True 8624.000000 8624 100.000000 1 4670 1 chr5B.!!$R1 4669
1 TraesCS5B01G236500 chr5D 353509810 353513877 4067 True 1983.333333 5060 94.614333 606 4548 3 chr5D.!!$R1 3942
2 TraesCS5B01G236500 chr5A 454433947 454438234 4287 True 1886.666667 5049 89.638667 220 4503 3 chr5A.!!$R1 4283

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
450 451 0.732880 ACTATGTGCGTGCGTGTCTC 60.733 55.000 0.00 0.0 0.0 3.36 F
927 969 2.028130 GCCAGCAGCGCAGATTTAT 58.972 52.632 11.47 0.0 0.0 1.40 F
1902 1965 2.095768 ACGAATGCCATGTGACGAAAAG 60.096 45.455 0.00 0.0 0.0 2.27 F
2562 2647 0.032678 GGTGCGACGATGATGAGGAT 59.967 55.000 0.00 0.0 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1315 1372 0.390124 TACGTCGGCTTGAACAGGTT 59.610 50.000 0.00 0.0 0.0 3.50 R
2562 2647 2.442212 TTTTACGTCAGGTCGCATCA 57.558 45.000 0.00 0.0 0.0 3.07 R
3625 3751 1.912110 GTCGTAGTTGTCATCAGTCGC 59.088 52.381 0.00 0.0 0.0 5.19 R
4205 4437 0.033405 TCCTCCTCGAATCGGTCCTT 60.033 55.000 1.76 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.781056 AGGCAAAATGAAGTTAGAAAACAAGA 58.219 30.769 0.00 0.00 38.12 3.02
27 28 8.424133 AGGCAAAATGAAGTTAGAAAACAAGAT 58.576 29.630 0.00 0.00 38.12 2.40
28 29 9.045223 GGCAAAATGAAGTTAGAAAACAAGATT 57.955 29.630 0.00 0.00 38.12 2.40
41 42 8.209917 AGAAAACAAGATTATCGTAATCCACC 57.790 34.615 11.62 0.00 0.00 4.61
42 43 7.827236 AGAAAACAAGATTATCGTAATCCACCA 59.173 33.333 11.62 0.00 0.00 4.17
43 44 7.553881 AAACAAGATTATCGTAATCCACCAG 57.446 36.000 11.62 4.14 0.00 4.00
44 45 6.479972 ACAAGATTATCGTAATCCACCAGA 57.520 37.500 11.62 0.00 0.00 3.86
45 46 6.516718 ACAAGATTATCGTAATCCACCAGAG 58.483 40.000 11.62 0.00 0.00 3.35
46 47 6.098409 ACAAGATTATCGTAATCCACCAGAGT 59.902 38.462 11.62 0.00 0.00 3.24
47 48 7.287005 ACAAGATTATCGTAATCCACCAGAGTA 59.713 37.037 11.62 0.00 0.00 2.59
48 49 8.307483 CAAGATTATCGTAATCCACCAGAGTAT 58.693 37.037 11.62 0.00 0.00 2.12
49 50 8.057536 AGATTATCGTAATCCACCAGAGTATC 57.942 38.462 11.62 0.00 0.00 2.24
50 51 7.670140 AGATTATCGTAATCCACCAGAGTATCA 59.330 37.037 11.62 0.00 37.82 2.15
51 52 7.591421 TTATCGTAATCCACCAGAGTATCAA 57.409 36.000 0.00 0.00 37.82 2.57
52 53 5.925506 TCGTAATCCACCAGAGTATCAAA 57.074 39.130 0.00 0.00 37.82 2.69
53 54 5.657474 TCGTAATCCACCAGAGTATCAAAC 58.343 41.667 0.00 0.00 37.82 2.93
54 55 5.186215 TCGTAATCCACCAGAGTATCAAACA 59.814 40.000 0.00 0.00 37.82 2.83
55 56 5.291128 CGTAATCCACCAGAGTATCAAACAC 59.709 44.000 0.00 0.00 37.82 3.32
56 57 4.908601 ATCCACCAGAGTATCAAACACA 57.091 40.909 0.00 0.00 37.82 3.72
57 58 4.908601 TCCACCAGAGTATCAAACACAT 57.091 40.909 0.00 0.00 37.82 3.21
58 59 5.241403 TCCACCAGAGTATCAAACACATT 57.759 39.130 0.00 0.00 37.82 2.71
59 60 5.245531 TCCACCAGAGTATCAAACACATTC 58.754 41.667 0.00 0.00 37.82 2.67
60 61 4.093408 CCACCAGAGTATCAAACACATTCG 59.907 45.833 0.00 0.00 37.82 3.34
61 62 4.929211 CACCAGAGTATCAAACACATTCGA 59.071 41.667 0.00 0.00 37.82 3.71
62 63 5.582269 CACCAGAGTATCAAACACATTCGAT 59.418 40.000 0.00 0.00 37.82 3.59
63 64 6.092670 CACCAGAGTATCAAACACATTCGATT 59.907 38.462 0.00 0.00 37.82 3.34
64 65 6.092670 ACCAGAGTATCAAACACATTCGATTG 59.907 38.462 5.78 5.78 37.82 2.67
65 66 6.092670 CCAGAGTATCAAACACATTCGATTGT 59.907 38.462 7.12 7.12 37.82 2.71
66 67 7.176075 CAGAGTATCAAACACATTCGATTGTC 58.824 38.462 9.90 0.00 37.82 3.18
67 68 6.873605 AGAGTATCAAACACATTCGATTGTCA 59.126 34.615 9.90 0.00 37.82 3.58
68 69 6.831769 AGTATCAAACACATTCGATTGTCAC 58.168 36.000 9.90 2.44 0.00 3.67
69 70 5.687770 ATCAAACACATTCGATTGTCACA 57.312 34.783 9.90 0.00 0.00 3.58
70 71 5.094429 TCAAACACATTCGATTGTCACAG 57.906 39.130 9.90 2.53 0.00 3.66
71 72 4.574421 TCAAACACATTCGATTGTCACAGT 59.426 37.500 9.90 3.12 0.00 3.55
72 73 5.755861 TCAAACACATTCGATTGTCACAGTA 59.244 36.000 9.90 0.00 0.00 2.74
73 74 5.591643 AACACATTCGATTGTCACAGTAC 57.408 39.130 9.90 0.00 0.00 2.73
74 75 4.627058 ACACATTCGATTGTCACAGTACA 58.373 39.130 9.90 0.00 0.00 2.90
75 76 4.447724 ACACATTCGATTGTCACAGTACAC 59.552 41.667 9.90 0.00 0.00 2.90
76 77 4.447389 CACATTCGATTGTCACAGTACACA 59.553 41.667 9.90 0.00 0.00 3.72
77 78 4.447724 ACATTCGATTGTCACAGTACACAC 59.552 41.667 7.12 0.00 0.00 3.82
78 79 3.021269 TCGATTGTCACAGTACACACC 57.979 47.619 0.00 0.00 0.00 4.16
79 80 2.362717 TCGATTGTCACAGTACACACCA 59.637 45.455 0.00 0.00 0.00 4.17
80 81 3.006430 TCGATTGTCACAGTACACACCAT 59.994 43.478 0.00 0.00 0.00 3.55
81 82 3.123453 CGATTGTCACAGTACACACCATG 59.877 47.826 0.00 0.00 0.00 3.66
82 83 1.877637 TGTCACAGTACACACCATGC 58.122 50.000 0.00 0.00 0.00 4.06
83 84 1.139853 TGTCACAGTACACACCATGCA 59.860 47.619 0.00 0.00 0.00 3.96
84 85 2.217750 GTCACAGTACACACCATGCAA 58.782 47.619 0.00 0.00 0.00 4.08
85 86 2.616376 GTCACAGTACACACCATGCAAA 59.384 45.455 0.00 0.00 0.00 3.68
86 87 3.066064 GTCACAGTACACACCATGCAAAA 59.934 43.478 0.00 0.00 0.00 2.44
87 88 3.888323 TCACAGTACACACCATGCAAAAT 59.112 39.130 0.00 0.00 0.00 1.82
88 89 5.049060 GTCACAGTACACACCATGCAAAATA 60.049 40.000 0.00 0.00 0.00 1.40
89 90 5.181056 TCACAGTACACACCATGCAAAATAG 59.819 40.000 0.00 0.00 0.00 1.73
90 91 4.458989 ACAGTACACACCATGCAAAATAGG 59.541 41.667 0.00 0.00 0.00 2.57
91 92 4.016444 AGTACACACCATGCAAAATAGGG 58.984 43.478 0.00 0.00 0.00 3.53
92 93 2.178580 ACACACCATGCAAAATAGGGG 58.821 47.619 0.00 0.00 0.00 4.79
93 94 1.134729 CACACCATGCAAAATAGGGGC 60.135 52.381 0.00 0.00 0.00 5.80
94 95 1.193323 CACCATGCAAAATAGGGGCA 58.807 50.000 0.00 0.00 42.43 5.36
95 96 1.134729 CACCATGCAAAATAGGGGCAC 60.135 52.381 0.00 0.00 40.83 5.01
96 97 1.193323 CCATGCAAAATAGGGGCACA 58.807 50.000 0.00 0.00 40.83 4.57
97 98 1.554160 CCATGCAAAATAGGGGCACAA 59.446 47.619 0.00 0.00 40.83 3.33
98 99 2.171027 CCATGCAAAATAGGGGCACAAT 59.829 45.455 0.00 0.00 40.83 2.71
99 100 3.199677 CATGCAAAATAGGGGCACAATG 58.800 45.455 0.00 0.00 40.83 2.82
100 101 1.554160 TGCAAAATAGGGGCACAATGG 59.446 47.619 0.00 0.00 31.58 3.16
101 102 1.830477 GCAAAATAGGGGCACAATGGA 59.170 47.619 0.00 0.00 0.00 3.41
102 103 2.435437 GCAAAATAGGGGCACAATGGAT 59.565 45.455 0.00 0.00 0.00 3.41
103 104 3.640967 GCAAAATAGGGGCACAATGGATA 59.359 43.478 0.00 0.00 0.00 2.59
104 105 4.100808 GCAAAATAGGGGCACAATGGATAA 59.899 41.667 0.00 0.00 0.00 1.75
105 106 5.600696 CAAAATAGGGGCACAATGGATAAC 58.399 41.667 0.00 0.00 0.00 1.89
106 107 4.534647 AATAGGGGCACAATGGATAACA 57.465 40.909 0.00 0.00 0.00 2.41
107 108 4.747265 ATAGGGGCACAATGGATAACAT 57.253 40.909 0.00 0.00 43.07 2.71
108 109 2.949447 AGGGGCACAATGGATAACATC 58.051 47.619 0.00 0.00 39.40 3.06
109 110 2.515429 AGGGGCACAATGGATAACATCT 59.485 45.455 0.00 0.00 39.40 2.90
110 111 2.887152 GGGGCACAATGGATAACATCTC 59.113 50.000 0.00 0.00 39.40 2.75
111 112 3.435601 GGGGCACAATGGATAACATCTCT 60.436 47.826 0.00 0.00 39.40 3.10
112 113 3.817647 GGGCACAATGGATAACATCTCTC 59.182 47.826 0.00 0.00 39.40 3.20
113 114 4.445448 GGGCACAATGGATAACATCTCTCT 60.445 45.833 0.00 0.00 39.40 3.10
114 115 4.754114 GGCACAATGGATAACATCTCTCTC 59.246 45.833 0.00 0.00 39.40 3.20
115 116 5.454471 GGCACAATGGATAACATCTCTCTCT 60.454 44.000 0.00 0.00 39.40 3.10
116 117 5.695816 GCACAATGGATAACATCTCTCTCTC 59.304 44.000 0.00 0.00 39.40 3.20
117 118 6.462768 GCACAATGGATAACATCTCTCTCTCT 60.463 42.308 0.00 0.00 39.40 3.10
118 119 7.147312 CACAATGGATAACATCTCTCTCTCTC 58.853 42.308 0.00 0.00 39.40 3.20
119 120 7.014518 CACAATGGATAACATCTCTCTCTCTCT 59.985 40.741 0.00 0.00 39.40 3.10
120 121 7.231317 ACAATGGATAACATCTCTCTCTCTCTC 59.769 40.741 0.00 0.00 39.40 3.20
121 122 6.514012 TGGATAACATCTCTCTCTCTCTCT 57.486 41.667 0.00 0.00 0.00 3.10
122 123 6.533730 TGGATAACATCTCTCTCTCTCTCTC 58.466 44.000 0.00 0.00 0.00 3.20
123 124 6.329986 TGGATAACATCTCTCTCTCTCTCTCT 59.670 42.308 0.00 0.00 0.00 3.10
124 125 6.876257 GGATAACATCTCTCTCTCTCTCTCTC 59.124 46.154 0.00 0.00 0.00 3.20
125 126 5.965033 AACATCTCTCTCTCTCTCTCTCT 57.035 43.478 0.00 0.00 0.00 3.10
126 127 5.543507 ACATCTCTCTCTCTCTCTCTCTC 57.456 47.826 0.00 0.00 0.00 3.20
127 128 5.215069 ACATCTCTCTCTCTCTCTCTCTCT 58.785 45.833 0.00 0.00 0.00 3.10
128 129 5.304101 ACATCTCTCTCTCTCTCTCTCTCTC 59.696 48.000 0.00 0.00 0.00 3.20
129 130 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
130 131 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
131 132 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
132 133 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
133 134 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
134 135 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
135 136 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
136 137 6.101881 TCTCTCTCTCTCTCTCTCTCTCTCTA 59.898 46.154 0.00 0.00 0.00 2.43
137 138 6.857848 TCTCTCTCTCTCTCTCTCTCTCTAT 58.142 44.000 0.00 0.00 0.00 1.98
138 139 6.945435 TCTCTCTCTCTCTCTCTCTCTCTATC 59.055 46.154 0.00 0.00 0.00 2.08
139 140 6.857848 TCTCTCTCTCTCTCTCTCTCTATCT 58.142 44.000 0.00 0.00 0.00 1.98
140 141 6.945435 TCTCTCTCTCTCTCTCTCTCTATCTC 59.055 46.154 0.00 0.00 0.00 2.75
141 142 6.857848 TCTCTCTCTCTCTCTCTCTATCTCT 58.142 44.000 0.00 0.00 0.00 3.10
142 143 7.990055 TCTCTCTCTCTCTCTCTCTATCTCTA 58.010 42.308 0.00 0.00 0.00 2.43
143 144 8.619281 TCTCTCTCTCTCTCTCTCTATCTCTAT 58.381 40.741 0.00 0.00 0.00 1.98
144 145 8.815565 TCTCTCTCTCTCTCTCTATCTCTATC 57.184 42.308 0.00 0.00 0.00 2.08
145 146 8.619281 TCTCTCTCTCTCTCTCTATCTCTATCT 58.381 40.741 0.00 0.00 0.00 1.98
146 147 8.815565 TCTCTCTCTCTCTCTATCTCTATCTC 57.184 42.308 0.00 0.00 0.00 2.75
147 148 8.619281 TCTCTCTCTCTCTCTATCTCTATCTCT 58.381 40.741 0.00 0.00 0.00 3.10
148 149 8.815565 TCTCTCTCTCTCTATCTCTATCTCTC 57.184 42.308 0.00 0.00 0.00 3.20
149 150 8.619281 TCTCTCTCTCTCTATCTCTATCTCTCT 58.381 40.741 0.00 0.00 0.00 3.10
150 151 8.815565 TCTCTCTCTCTATCTCTATCTCTCTC 57.184 42.308 0.00 0.00 0.00 3.20
151 152 8.619281 TCTCTCTCTCTATCTCTATCTCTCTCT 58.381 40.741 0.00 0.00 0.00 3.10
152 153 8.815565 TCTCTCTCTATCTCTATCTCTCTCTC 57.184 42.308 0.00 0.00 0.00 3.20
153 154 8.619281 TCTCTCTCTATCTCTATCTCTCTCTCT 58.381 40.741 0.00 0.00 0.00 3.10
154 155 8.815565 TCTCTCTATCTCTATCTCTCTCTCTC 57.184 42.308 0.00 0.00 0.00 3.20
155 156 8.619281 TCTCTCTATCTCTATCTCTCTCTCTCT 58.381 40.741 0.00 0.00 0.00 3.10
156 157 8.815565 TCTCTATCTCTATCTCTCTCTCTCTC 57.184 42.308 0.00 0.00 0.00 3.20
157 158 8.619281 TCTCTATCTCTATCTCTCTCTCTCTCT 58.381 40.741 0.00 0.00 0.00 3.10
158 159 8.815565 TCTATCTCTATCTCTCTCTCTCTCTC 57.184 42.308 0.00 0.00 0.00 3.20
159 160 6.865834 ATCTCTATCTCTCTCTCTCTCTCC 57.134 45.833 0.00 0.00 0.00 3.71
160 161 5.087323 TCTCTATCTCTCTCTCTCTCTCCC 58.913 50.000 0.00 0.00 0.00 4.30
161 162 5.090139 CTCTATCTCTCTCTCTCTCTCCCT 58.910 50.000 0.00 0.00 0.00 4.20
162 163 5.087323 TCTATCTCTCTCTCTCTCTCCCTC 58.913 50.000 0.00 0.00 0.00 4.30
163 164 3.421394 TCTCTCTCTCTCTCTCCCTCT 57.579 52.381 0.00 0.00 0.00 3.69
164 165 3.309296 TCTCTCTCTCTCTCTCCCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
165 166 3.051803 TCTCTCTCTCTCTCTCCCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
166 167 3.309296 TCTCTCTCTCTCTCCCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
167 168 3.051803 TCTCTCTCTCTCTCCCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
168 169 3.309296 TCTCTCTCTCTCCCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
169 170 3.051803 TCTCTCTCTCTCCCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
170 171 3.309296 TCTCTCTCTCCCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
171 172 3.051803 TCTCTCTCTCCCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
172 173 3.309296 TCTCTCTCCCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
173 174 3.051803 TCTCTCTCCCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
174 175 3.309296 TCTCTCCCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
175 176 3.041211 CTCTCCCTCTCTCTCTCTCTCA 58.959 54.545 0.00 0.00 0.00 3.27
176 177 3.649981 CTCTCCCTCTCTCTCTCTCTCAT 59.350 52.174 0.00 0.00 0.00 2.90
177 178 4.047166 TCTCCCTCTCTCTCTCTCTCATT 58.953 47.826 0.00 0.00 0.00 2.57
178 179 4.139786 CTCCCTCTCTCTCTCTCTCATTG 58.860 52.174 0.00 0.00 0.00 2.82
179 180 2.624838 CCCTCTCTCTCTCTCTCATTGC 59.375 54.545 0.00 0.00 0.00 3.56
180 181 3.289836 CCTCTCTCTCTCTCTCATTGCA 58.710 50.000 0.00 0.00 0.00 4.08
181 182 3.893200 CCTCTCTCTCTCTCTCATTGCAT 59.107 47.826 0.00 0.00 0.00 3.96
182 183 4.342951 CCTCTCTCTCTCTCTCATTGCATT 59.657 45.833 0.00 0.00 0.00 3.56
183 184 5.265350 TCTCTCTCTCTCTCATTGCATTG 57.735 43.478 2.08 2.08 0.00 2.82
184 185 3.794717 TCTCTCTCTCTCATTGCATTGC 58.205 45.455 0.46 0.46 0.00 3.56
185 186 3.197116 TCTCTCTCTCTCATTGCATTGCA 59.803 43.478 7.38 7.38 36.47 4.08
186 187 3.532542 TCTCTCTCTCATTGCATTGCAG 58.467 45.455 11.76 1.32 40.61 4.41
187 188 3.055312 TCTCTCTCTCATTGCATTGCAGT 60.055 43.478 11.76 6.09 40.61 4.40
188 189 3.682696 TCTCTCTCATTGCATTGCAGTT 58.317 40.909 11.76 0.86 40.61 3.16
189 190 4.077108 TCTCTCTCATTGCATTGCAGTTT 58.923 39.130 11.76 0.00 40.61 2.66
190 191 4.155462 TCTCTCTCATTGCATTGCAGTTTC 59.845 41.667 11.76 0.00 40.61 2.78
191 192 3.192001 TCTCTCATTGCATTGCAGTTTCC 59.808 43.478 11.76 0.00 40.61 3.13
192 193 2.892215 TCTCATTGCATTGCAGTTTCCA 59.108 40.909 11.76 0.00 40.61 3.53
193 194 3.057104 TCTCATTGCATTGCAGTTTCCAG 60.057 43.478 11.76 4.04 40.61 3.86
194 195 1.730064 CATTGCATTGCAGTTTCCAGC 59.270 47.619 11.76 0.00 40.61 4.85
195 196 1.042229 TTGCATTGCAGTTTCCAGCT 58.958 45.000 11.76 0.00 40.61 4.24
196 197 1.042229 TGCATTGCAGTTTCCAGCTT 58.958 45.000 7.38 0.00 33.32 3.74
197 198 1.413445 TGCATTGCAGTTTCCAGCTTT 59.587 42.857 7.38 0.00 33.32 3.51
198 199 2.158928 TGCATTGCAGTTTCCAGCTTTT 60.159 40.909 7.38 0.00 33.32 2.27
199 200 2.874086 GCATTGCAGTTTCCAGCTTTTT 59.126 40.909 3.15 0.00 0.00 1.94
250 251 5.643379 TCCATAATGAGAAAACCTTGTGC 57.357 39.130 0.00 0.00 0.00 4.57
251 252 5.076182 TCCATAATGAGAAAACCTTGTGCA 58.924 37.500 0.00 0.00 0.00 4.57
259 260 4.831107 AGAAAACCTTGTGCAAATGTGTT 58.169 34.783 0.00 0.00 0.00 3.32
327 328 1.587034 GCGAAATTTCTACTCCCGACG 59.413 52.381 15.92 0.85 0.00 5.12
333 334 1.320344 TTCTACTCCCGACGCATGCT 61.320 55.000 17.13 2.38 0.00 3.79
347 348 3.181484 ACGCATGCTTAATCACCGTAGTA 60.181 43.478 17.13 0.00 0.00 1.82
361 362 6.342111 TCACCGTAGTACATATCATTTGCAA 58.658 36.000 0.00 0.00 0.00 4.08
363 364 6.478673 CACCGTAGTACATATCATTTGCAAGA 59.521 38.462 0.00 0.00 0.00 3.02
364 365 7.171508 CACCGTAGTACATATCATTTGCAAGAT 59.828 37.037 0.00 2.67 0.00 2.40
378 379 9.241919 TCATTTGCAAGATTTAGAACCTATCAA 57.758 29.630 0.00 0.00 0.00 2.57
382 383 9.466497 TTGCAAGATTTAGAACCTATCAAATCT 57.534 29.630 0.00 3.25 41.89 2.40
383 384 9.466497 TGCAAGATTTAGAACCTATCAAATCTT 57.534 29.630 12.88 12.88 44.94 2.40
410 411 6.394345 AAATCCAAGGAGTCCTAAAGTGAT 57.606 37.500 13.43 7.47 31.13 3.06
433 434 3.490348 AGTCAAATGTTAGCTGCCAACT 58.510 40.909 11.96 0.00 0.00 3.16
450 451 0.732880 ACTATGTGCGTGCGTGTCTC 60.733 55.000 0.00 0.00 0.00 3.36
456 457 3.490759 CGTGCGTGTCTCATGCCC 61.491 66.667 10.72 0.00 44.81 5.36
480 481 7.106239 CCACATTTTGATAGTGGTAGTTCTCT 58.894 38.462 0.00 0.00 45.95 3.10
481 482 7.065085 CCACATTTTGATAGTGGTAGTTCTCTG 59.935 40.741 0.00 0.00 45.95 3.35
482 483 7.819415 CACATTTTGATAGTGGTAGTTCTCTGA 59.181 37.037 0.00 0.00 0.00 3.27
483 484 8.543774 ACATTTTGATAGTGGTAGTTCTCTGAT 58.456 33.333 0.00 0.00 0.00 2.90
484 485 9.388506 CATTTTGATAGTGGTAGTTCTCTGATT 57.611 33.333 0.00 0.00 0.00 2.57
486 487 9.871238 TTTTGATAGTGGTAGTTCTCTGATTAC 57.129 33.333 0.00 0.00 0.00 1.89
487 488 8.824756 TTGATAGTGGTAGTTCTCTGATTACT 57.175 34.615 0.00 0.00 0.00 2.24
536 539 8.688747 AAAGTGTGATCTCTTTCTTCTTCAAT 57.311 30.769 0.00 0.00 33.82 2.57
538 541 9.784531 AAGTGTGATCTCTTTCTTCTTCAATAA 57.215 29.630 0.00 0.00 0.00 1.40
539 542 9.784531 AGTGTGATCTCTTTCTTCTTCAATAAA 57.215 29.630 0.00 0.00 0.00 1.40
636 644 3.384668 GGAAGCAGCCTGTTTTTCTTTC 58.615 45.455 0.00 0.00 0.00 2.62
684 692 5.243730 ACTTGACTTTGGGTTTCACCATATG 59.756 40.000 0.00 0.00 41.02 1.78
685 693 4.991776 TGACTTTGGGTTTCACCATATGA 58.008 39.130 3.65 0.00 41.02 2.15
686 694 5.389520 TGACTTTGGGTTTCACCATATGAA 58.610 37.500 3.65 0.00 45.92 2.57
739 767 5.424121 AAATTGTCCTCTTCACTTTGACG 57.576 39.130 0.00 0.00 0.00 4.35
927 969 2.028130 GCCAGCAGCGCAGATTTAT 58.972 52.632 11.47 0.00 0.00 1.40
1320 1377 4.025401 GTGTCGCGGGCAAACCTG 62.025 66.667 6.13 0.00 46.21 4.00
1404 1461 3.066814 GGCGACTACCACCTCCGT 61.067 66.667 0.00 0.00 0.00 4.69
1628 1691 9.006839 AGTGTTGGATATTAATCAGTGCATATG 57.993 33.333 0.00 0.00 33.41 1.78
1902 1965 2.095768 ACGAATGCCATGTGACGAAAAG 60.096 45.455 0.00 0.00 0.00 2.27
1957 2028 2.181777 GCGACATCCTGCACGAGA 59.818 61.111 0.00 0.00 0.00 4.04
1968 2039 3.522731 CACGAGAGGAGGGAGCGG 61.523 72.222 0.00 0.00 0.00 5.52
2172 2252 4.711949 AAGCTGCTGGAGGCCGTG 62.712 66.667 1.35 0.00 40.92 4.94
2311 2392 9.953565 AGGCTTACAGTTATATGTTTTCTTGTA 57.046 29.630 0.00 0.00 34.56 2.41
2562 2647 0.032678 GGTGCGACGATGATGAGGAT 59.967 55.000 0.00 0.00 0.00 3.24
2867 2964 5.175856 GTCAATACGCTCCATTCATGAGTAC 59.824 44.000 0.00 0.00 0.00 2.73
2868 2965 2.209838 ACGCTCCATTCATGAGTACG 57.790 50.000 0.00 0.00 0.00 3.67
2869 2966 1.749063 ACGCTCCATTCATGAGTACGA 59.251 47.619 0.00 0.00 0.00 3.43
2870 2967 2.120232 CGCTCCATTCATGAGTACGAC 58.880 52.381 0.00 0.00 0.00 4.34
2871 2968 2.479560 CGCTCCATTCATGAGTACGACA 60.480 50.000 0.00 0.00 0.00 4.35
2872 2969 3.521560 GCTCCATTCATGAGTACGACAA 58.478 45.455 0.00 0.00 0.00 3.18
2873 2970 3.307242 GCTCCATTCATGAGTACGACAAC 59.693 47.826 0.00 0.00 0.00 3.32
2874 2971 4.494484 CTCCATTCATGAGTACGACAACA 58.506 43.478 0.00 0.00 0.00 3.33
2875 2972 4.494484 TCCATTCATGAGTACGACAACAG 58.506 43.478 0.00 0.00 0.00 3.16
2876 2973 4.021456 TCCATTCATGAGTACGACAACAGT 60.021 41.667 0.00 0.00 0.00 3.55
2877 2974 5.184287 TCCATTCATGAGTACGACAACAGTA 59.816 40.000 0.00 0.00 0.00 2.74
2878 2975 5.867174 CCATTCATGAGTACGACAACAGTAA 59.133 40.000 0.00 0.00 0.00 2.24
2902 2999 6.474630 ACCTGGTGAATACGGTGTTAAATAA 58.525 36.000 0.00 0.00 0.00 1.40
2903 3000 6.596497 ACCTGGTGAATACGGTGTTAAATAAG 59.404 38.462 0.00 0.00 0.00 1.73
2904 3001 6.596497 CCTGGTGAATACGGTGTTAAATAAGT 59.404 38.462 0.00 0.00 0.00 2.24
2905 3002 7.765360 CCTGGTGAATACGGTGTTAAATAAGTA 59.235 37.037 0.00 0.00 0.00 2.24
2906 3003 8.477984 TGGTGAATACGGTGTTAAATAAGTAC 57.522 34.615 0.00 0.00 0.00 2.73
2907 3004 8.093307 TGGTGAATACGGTGTTAAATAAGTACA 58.907 33.333 0.00 0.00 0.00 2.90
2908 3005 8.382875 GGTGAATACGGTGTTAAATAAGTACAC 58.617 37.037 0.00 0.00 41.01 2.90
2909 3006 9.143631 GTGAATACGGTGTTAAATAAGTACACT 57.856 33.333 0.00 0.00 41.37 3.55
2966 3063 6.628398 GCCCTATCTAGAATACTTGAATCCGG 60.628 46.154 0.00 0.00 32.48 5.14
2975 3072 3.643159 ACTTGAATCCGGCTTTGTTTC 57.357 42.857 0.00 0.00 0.00 2.78
3006 3104 2.943036 AGAGCCAACTTTTTACGGGA 57.057 45.000 0.00 0.00 0.00 5.14
3027 3125 4.082571 GGATCTCATTTTCTTGTGGTGGTG 60.083 45.833 0.00 0.00 0.00 4.17
3329 3435 2.173669 CCATGCACCGATCGTGTCC 61.174 63.158 15.09 2.53 44.97 4.02
3430 3549 1.144716 GATCACTCGCTGCCATGGA 59.855 57.895 18.40 0.00 0.00 3.41
3452 3578 3.119101 AGACAGCTGTGGTACTAAATCGG 60.119 47.826 27.27 0.00 0.00 4.18
3563 3689 2.929964 GCCCATTCCCTGTTCCCCA 61.930 63.158 0.00 0.00 0.00 4.96
3564 3690 1.307647 CCCATTCCCTGTTCCCCAG 59.692 63.158 0.00 0.00 41.15 4.45
3565 3691 1.214305 CCCATTCCCTGTTCCCCAGA 61.214 60.000 0.00 0.00 44.49 3.86
3625 3751 3.006728 TGGGTAGGAAGGGGTGCG 61.007 66.667 0.00 0.00 0.00 5.34
3696 3822 2.203470 ACGTAGATAGCTAGAGGGCC 57.797 55.000 0.00 0.00 0.00 5.80
3700 3826 2.319025 AGATAGCTAGAGGGCCCTTC 57.681 55.000 29.39 17.95 0.00 3.46
3706 3832 0.560688 CTAGAGGGCCCTTCTCTCCT 59.439 60.000 29.39 19.75 41.37 3.69
3733 3859 8.993852 TTTTGTTGTTATTGTTGTTGTTGTTG 57.006 26.923 0.00 0.00 0.00 3.33
3734 3860 7.715265 TTGTTGTTATTGTTGTTGTTGTTGT 57.285 28.000 0.00 0.00 0.00 3.32
3735 3861 7.715265 TGTTGTTATTGTTGTTGTTGTTGTT 57.285 28.000 0.00 0.00 0.00 2.83
3736 3862 7.567571 TGTTGTTATTGTTGTTGTTGTTGTTG 58.432 30.769 0.00 0.00 0.00 3.33
3737 3863 7.224753 TGTTGTTATTGTTGTTGTTGTTGTTGT 59.775 29.630 0.00 0.00 0.00 3.32
3752 3878 4.756642 TGTTGTTGTGGCATTCTTCTCTAG 59.243 41.667 0.00 0.00 0.00 2.43
3818 3949 3.004419 ACGATGATCATGTACCGTAGTGG 59.996 47.826 14.30 0.00 46.41 4.00
3879 4010 1.892209 ATGACGCTTCCTTTTTCCGT 58.108 45.000 0.00 0.00 34.52 4.69
3908 4039 4.746115 TGCATTGAAACAATTCACTTCAGC 59.254 37.500 0.00 0.00 45.01 4.26
3926 4057 3.295800 CCCCCTACGACCACACTC 58.704 66.667 0.00 0.00 0.00 3.51
3927 4058 1.608336 CCCCCTACGACCACACTCA 60.608 63.158 0.00 0.00 0.00 3.41
3928 4059 0.976073 CCCCCTACGACCACACTCAT 60.976 60.000 0.00 0.00 0.00 2.90
3929 4060 1.687054 CCCCCTACGACCACACTCATA 60.687 57.143 0.00 0.00 0.00 2.15
3930 4061 2.104967 CCCCTACGACCACACTCATAA 58.895 52.381 0.00 0.00 0.00 1.90
3940 4071 3.244078 ACCACACTCATAACTCGAAAGCA 60.244 43.478 0.00 0.00 0.00 3.91
3944 4075 2.567615 ACTCATAACTCGAAAGCACCCT 59.432 45.455 0.00 0.00 0.00 4.34
3946 4077 2.832129 TCATAACTCGAAAGCACCCTCT 59.168 45.455 0.00 0.00 0.00 3.69
3948 4079 1.343069 AACTCGAAAGCACCCTCTCT 58.657 50.000 0.00 0.00 0.00 3.10
3971 4203 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3972 4204 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3973 4205 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3974 4206 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3975 4207 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3976 4208 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3977 4209 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3978 4210 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3979 4211 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3980 4212 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3981 4213 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3982 4214 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3983 4215 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3984 4216 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3985 4217 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3986 4218 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3987 4219 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3988 4220 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3989 4221 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3990 4222 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3991 4223 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3992 4224 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3993 4225 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3994 4226 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3995 4227 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
4006 4238 1.075698 TCTCTCTCTCCCAACGGTCTT 59.924 52.381 0.00 0.00 0.00 3.01
4069 4301 1.011968 TGCGACACACATTACCGAGC 61.012 55.000 0.00 0.00 0.00 5.03
4092 4324 1.609555 ACTTCGTCTCCGATCTATGGC 59.390 52.381 0.00 0.00 43.80 4.40
4192 4424 0.605319 AAGCGGTTCATCGAAAGCCA 60.605 50.000 0.00 0.00 31.22 4.75
4200 4432 2.300967 ATCGAAAGCCAGGGAGCCA 61.301 57.895 0.00 0.00 0.00 4.75
4205 4437 1.719063 AAAGCCAGGGAGCCAAGTGA 61.719 55.000 0.00 0.00 0.00 3.41
4224 4456 0.033405 AAGGACCGATTCGAGGAGGA 60.033 55.000 7.83 0.00 0.00 3.71
4245 4477 1.279025 GGCCTGGTATGTTCCCCTGA 61.279 60.000 0.00 0.00 0.00 3.86
4316 4548 4.512914 GCTCCCCATGAGTGCCCC 62.513 72.222 0.00 0.00 43.48 5.80
4387 4651 0.908198 AGCGCTCTCCTTTCTCCATT 59.092 50.000 2.64 0.00 0.00 3.16
4430 4694 2.792947 GGAGCGCGGATTGGAGGTA 61.793 63.158 8.83 0.00 0.00 3.08
4444 4708 2.183679 GGAGGTATATGCAGGAGGAGG 58.816 57.143 0.00 0.00 0.00 4.30
4513 4777 4.884668 ACGTGAAGGAGTTAATCAAGGA 57.115 40.909 0.00 0.00 0.00 3.36
4543 4807 3.541996 TGTGACTATGGATGCGAACAT 57.458 42.857 0.00 0.00 39.98 2.71
4548 4812 3.405831 ACTATGGATGCGAACATGGATG 58.594 45.455 0.00 0.00 36.35 3.51
4549 4813 2.643995 ATGGATGCGAACATGGATGA 57.356 45.000 0.00 0.00 36.35 2.92
4550 4814 1.957668 TGGATGCGAACATGGATGAG 58.042 50.000 0.00 0.00 36.35 2.90
4551 4815 1.485895 TGGATGCGAACATGGATGAGA 59.514 47.619 0.00 0.00 36.35 3.27
4552 4816 2.105306 TGGATGCGAACATGGATGAGAT 59.895 45.455 0.00 0.00 36.35 2.75
4553 4817 3.144506 GGATGCGAACATGGATGAGATT 58.855 45.455 0.00 0.00 36.35 2.40
4554 4818 3.058432 GGATGCGAACATGGATGAGATTG 60.058 47.826 0.00 0.00 36.35 2.67
4555 4819 1.672363 TGCGAACATGGATGAGATTGC 59.328 47.619 0.00 0.00 0.00 3.56
4556 4820 1.672363 GCGAACATGGATGAGATTGCA 59.328 47.619 0.00 0.00 0.00 4.08
4557 4821 2.097954 GCGAACATGGATGAGATTGCAA 59.902 45.455 0.00 0.00 0.00 4.08
4558 4822 3.791122 GCGAACATGGATGAGATTGCAAG 60.791 47.826 4.94 0.00 0.00 4.01
4559 4823 3.624410 CGAACATGGATGAGATTGCAAGA 59.376 43.478 4.94 0.00 0.00 3.02
4560 4824 4.275196 CGAACATGGATGAGATTGCAAGAT 59.725 41.667 4.94 0.00 0.00 2.40
4561 4825 5.515797 AACATGGATGAGATTGCAAGATG 57.484 39.130 4.94 0.00 0.00 2.90
4562 4826 4.533815 ACATGGATGAGATTGCAAGATGT 58.466 39.130 4.94 0.56 0.00 3.06
4563 4827 4.954202 ACATGGATGAGATTGCAAGATGTT 59.046 37.500 4.94 0.00 0.00 2.71
4564 4828 5.421056 ACATGGATGAGATTGCAAGATGTTT 59.579 36.000 4.94 0.00 0.00 2.83
4565 4829 5.988310 TGGATGAGATTGCAAGATGTTTT 57.012 34.783 4.94 0.00 0.00 2.43
4566 4830 6.349243 TGGATGAGATTGCAAGATGTTTTT 57.651 33.333 4.94 0.00 0.00 1.94
4583 4847 3.796866 TTTTTGGGGTGGGGGTATG 57.203 52.632 0.00 0.00 0.00 2.39
4584 4848 0.117340 TTTTTGGGGTGGGGGTATGG 59.883 55.000 0.00 0.00 0.00 2.74
4585 4849 0.780494 TTTTGGGGTGGGGGTATGGA 60.780 55.000 0.00 0.00 0.00 3.41
4586 4850 0.556380 TTTGGGGTGGGGGTATGGAT 60.556 55.000 0.00 0.00 0.00 3.41
4587 4851 0.350904 TTGGGGTGGGGGTATGGATA 59.649 55.000 0.00 0.00 0.00 2.59
4588 4852 0.581040 TGGGGTGGGGGTATGGATAT 59.419 55.000 0.00 0.00 0.00 1.63
4589 4853 1.059364 TGGGGTGGGGGTATGGATATT 60.059 52.381 0.00 0.00 0.00 1.28
4590 4854 2.187076 TGGGGTGGGGGTATGGATATTA 59.813 50.000 0.00 0.00 0.00 0.98
4591 4855 3.270812 GGGGTGGGGGTATGGATATTAA 58.729 50.000 0.00 0.00 0.00 1.40
4592 4856 3.268595 GGGGTGGGGGTATGGATATTAAG 59.731 52.174 0.00 0.00 0.00 1.85
4593 4857 4.180723 GGGTGGGGGTATGGATATTAAGA 58.819 47.826 0.00 0.00 0.00 2.10
4594 4858 4.794067 GGGTGGGGGTATGGATATTAAGAT 59.206 45.833 0.00 0.00 0.00 2.40
4595 4859 5.255443 GGGTGGGGGTATGGATATTAAGATT 59.745 44.000 0.00 0.00 0.00 2.40
4596 4860 6.240763 GGGTGGGGGTATGGATATTAAGATTT 60.241 42.308 0.00 0.00 0.00 2.17
4597 4861 7.036425 GGGTGGGGGTATGGATATTAAGATTTA 60.036 40.741 0.00 0.00 0.00 1.40
4598 4862 8.053355 GGTGGGGGTATGGATATTAAGATTTAG 58.947 40.741 0.00 0.00 0.00 1.85
4599 4863 8.053355 GTGGGGGTATGGATATTAAGATTTAGG 58.947 40.741 0.00 0.00 0.00 2.69
4600 4864 7.061054 GGGGGTATGGATATTAAGATTTAGGC 58.939 42.308 0.00 0.00 0.00 3.93
4601 4865 6.766467 GGGGTATGGATATTAAGATTTAGGCG 59.234 42.308 0.00 0.00 0.00 5.52
4602 4866 7.365295 GGGGTATGGATATTAAGATTTAGGCGA 60.365 40.741 0.00 0.00 0.00 5.54
4603 4867 8.211629 GGGTATGGATATTAAGATTTAGGCGAT 58.788 37.037 0.00 0.00 0.00 4.58
4604 4868 9.046296 GGTATGGATATTAAGATTTAGGCGATG 57.954 37.037 0.00 0.00 0.00 3.84
4605 4869 9.046296 GTATGGATATTAAGATTTAGGCGATGG 57.954 37.037 0.00 0.00 0.00 3.51
4606 4870 7.252612 TGGATATTAAGATTTAGGCGATGGA 57.747 36.000 0.00 0.00 0.00 3.41
4607 4871 7.331026 TGGATATTAAGATTTAGGCGATGGAG 58.669 38.462 0.00 0.00 0.00 3.86
4608 4872 6.763610 GGATATTAAGATTTAGGCGATGGAGG 59.236 42.308 0.00 0.00 0.00 4.30
4609 4873 5.825593 ATTAAGATTTAGGCGATGGAGGA 57.174 39.130 0.00 0.00 0.00 3.71
4610 4874 3.760580 AAGATTTAGGCGATGGAGGAG 57.239 47.619 0.00 0.00 0.00 3.69
4611 4875 1.974236 AGATTTAGGCGATGGAGGAGG 59.026 52.381 0.00 0.00 0.00 4.30
4612 4876 0.398318 ATTTAGGCGATGGAGGAGGC 59.602 55.000 0.00 0.00 0.00 4.70
4613 4877 2.028125 TTTAGGCGATGGAGGAGGCG 62.028 60.000 0.00 0.00 35.47 5.52
4616 4880 3.620785 GCGATGGAGGAGGCGGAT 61.621 66.667 0.00 0.00 0.00 4.18
4617 4881 3.142393 CGATGGAGGAGGCGGATT 58.858 61.111 0.00 0.00 0.00 3.01
4618 4882 1.005630 CGATGGAGGAGGCGGATTC 60.006 63.158 0.00 0.00 0.00 2.52
4619 4883 1.748329 CGATGGAGGAGGCGGATTCA 61.748 60.000 0.00 0.00 0.00 2.57
4620 4884 0.034616 GATGGAGGAGGCGGATTCAG 59.965 60.000 0.00 0.00 0.00 3.02
4621 4885 2.049627 ATGGAGGAGGCGGATTCAGC 62.050 60.000 0.00 0.00 0.00 4.26
4622 4886 2.735772 GGAGGAGGCGGATTCAGCA 61.736 63.158 10.92 0.00 36.08 4.41
4623 4887 1.221840 GAGGAGGCGGATTCAGCAA 59.778 57.895 10.92 0.00 36.08 3.91
4624 4888 0.392998 GAGGAGGCGGATTCAGCAAA 60.393 55.000 10.92 0.00 36.08 3.68
4625 4889 0.257039 AGGAGGCGGATTCAGCAAAT 59.743 50.000 10.92 0.00 36.08 2.32
4626 4890 0.665298 GGAGGCGGATTCAGCAAATC 59.335 55.000 10.92 5.46 42.68 2.17
4627 4891 1.673168 GAGGCGGATTCAGCAAATCT 58.327 50.000 10.92 0.00 42.93 2.40
4628 4892 2.485479 GGAGGCGGATTCAGCAAATCTA 60.485 50.000 10.92 0.00 42.93 1.98
4629 4893 2.805099 GAGGCGGATTCAGCAAATCTAG 59.195 50.000 10.92 7.32 42.93 2.43
4630 4894 2.171448 AGGCGGATTCAGCAAATCTAGT 59.829 45.455 10.92 0.00 42.93 2.57
4631 4895 2.545946 GGCGGATTCAGCAAATCTAGTC 59.454 50.000 10.92 4.95 42.93 2.59
4632 4896 2.545946 GCGGATTCAGCAAATCTAGTCC 59.454 50.000 3.79 0.00 42.93 3.85
4633 4897 3.797039 CGGATTCAGCAAATCTAGTCCA 58.203 45.455 10.54 0.00 42.93 4.02
4634 4898 3.806521 CGGATTCAGCAAATCTAGTCCAG 59.193 47.826 10.54 0.00 42.93 3.86
4635 4899 3.563390 GGATTCAGCAAATCTAGTCCAGC 59.437 47.826 10.54 0.00 42.93 4.85
4636 4900 2.299993 TCAGCAAATCTAGTCCAGCG 57.700 50.000 0.00 0.00 0.00 5.18
4637 4901 1.550524 TCAGCAAATCTAGTCCAGCGT 59.449 47.619 0.00 0.00 0.00 5.07
4638 4902 1.662629 CAGCAAATCTAGTCCAGCGTG 59.337 52.381 0.00 0.00 0.00 5.34
4639 4903 0.375106 GCAAATCTAGTCCAGCGTGC 59.625 55.000 0.00 0.00 0.00 5.34
4640 4904 2.009042 GCAAATCTAGTCCAGCGTGCT 61.009 52.381 0.00 0.00 0.00 4.40
4641 4905 1.929836 CAAATCTAGTCCAGCGTGCTC 59.070 52.381 0.00 0.00 0.00 4.26
4642 4906 0.101399 AATCTAGTCCAGCGTGCTCG 59.899 55.000 3.31 3.31 40.37 5.03
4652 4916 4.093952 CGTGCTCGCCAGGCTTTG 62.094 66.667 10.54 0.05 0.00 2.77
4653 4917 2.980233 GTGCTCGCCAGGCTTTGT 60.980 61.111 10.54 0.00 0.00 2.83
4654 4918 1.671054 GTGCTCGCCAGGCTTTGTA 60.671 57.895 10.54 0.00 0.00 2.41
4655 4919 1.026718 GTGCTCGCCAGGCTTTGTAT 61.027 55.000 10.54 0.00 0.00 2.29
4656 4920 0.322456 TGCTCGCCAGGCTTTGTATT 60.322 50.000 10.54 0.00 0.00 1.89
4657 4921 1.065782 TGCTCGCCAGGCTTTGTATTA 60.066 47.619 10.54 0.00 0.00 0.98
4658 4922 1.330829 GCTCGCCAGGCTTTGTATTAC 59.669 52.381 10.54 0.00 0.00 1.89
4659 4923 2.906354 CTCGCCAGGCTTTGTATTACT 58.094 47.619 10.54 0.00 0.00 2.24
4660 4924 2.866762 CTCGCCAGGCTTTGTATTACTC 59.133 50.000 10.54 0.00 0.00 2.59
4661 4925 1.940613 CGCCAGGCTTTGTATTACTCC 59.059 52.381 10.54 0.00 0.00 3.85
4662 4926 2.679639 CGCCAGGCTTTGTATTACTCCA 60.680 50.000 10.54 0.00 0.00 3.86
4663 4927 3.352648 GCCAGGCTTTGTATTACTCCAA 58.647 45.455 3.29 0.00 0.00 3.53
4664 4928 3.378427 GCCAGGCTTTGTATTACTCCAAG 59.622 47.826 3.29 0.00 0.00 3.61
4665 4929 4.843728 CCAGGCTTTGTATTACTCCAAGA 58.156 43.478 0.00 0.00 0.00 3.02
4666 4930 4.878397 CCAGGCTTTGTATTACTCCAAGAG 59.122 45.833 0.00 0.00 35.52 2.85
4667 4931 4.333926 CAGGCTTTGTATTACTCCAAGAGC 59.666 45.833 0.00 0.00 32.04 4.09
4668 4932 3.309954 GGCTTTGTATTACTCCAAGAGCG 59.690 47.826 0.00 0.00 32.04 5.03
4669 4933 3.309954 GCTTTGTATTACTCCAAGAGCGG 59.690 47.826 0.00 0.00 32.04 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.908903 TCTTGTTTTCTAACTTCATTTTGCCTA 58.091 29.630 0.00 0.00 35.24 3.93
1 2 7.781056 TCTTGTTTTCTAACTTCATTTTGCCT 58.219 30.769 0.00 0.00 35.24 4.75
2 3 8.593492 ATCTTGTTTTCTAACTTCATTTTGCC 57.407 30.769 0.00 0.00 35.24 4.52
15 16 9.321562 GGTGGATTACGATAATCTTGTTTTCTA 57.678 33.333 13.67 0.00 0.00 2.10
16 17 7.827236 TGGTGGATTACGATAATCTTGTTTTCT 59.173 33.333 13.67 0.00 0.00 2.52
17 18 7.981142 TGGTGGATTACGATAATCTTGTTTTC 58.019 34.615 13.67 1.99 0.00 2.29
18 19 7.827236 TCTGGTGGATTACGATAATCTTGTTTT 59.173 33.333 13.67 0.00 0.00 2.43
19 20 7.335627 TCTGGTGGATTACGATAATCTTGTTT 58.664 34.615 13.67 0.00 0.00 2.83
20 21 6.884832 TCTGGTGGATTACGATAATCTTGTT 58.115 36.000 13.67 0.00 0.00 2.83
21 22 6.098409 ACTCTGGTGGATTACGATAATCTTGT 59.902 38.462 13.67 0.00 0.00 3.16
22 23 6.516718 ACTCTGGTGGATTACGATAATCTTG 58.483 40.000 13.67 4.92 0.00 3.02
23 24 6.732896 ACTCTGGTGGATTACGATAATCTT 57.267 37.500 13.67 0.00 0.00 2.40
24 25 7.670140 TGATACTCTGGTGGATTACGATAATCT 59.330 37.037 13.67 0.65 0.00 2.40
25 26 7.827701 TGATACTCTGGTGGATTACGATAATC 58.172 38.462 0.00 0.00 0.00 1.75
26 27 7.776618 TGATACTCTGGTGGATTACGATAAT 57.223 36.000 0.00 0.00 0.00 1.28
27 28 7.591421 TTGATACTCTGGTGGATTACGATAA 57.409 36.000 0.00 0.00 0.00 1.75
28 29 7.068962 TGTTTGATACTCTGGTGGATTACGATA 59.931 37.037 0.00 0.00 0.00 2.92
29 30 6.127168 TGTTTGATACTCTGGTGGATTACGAT 60.127 38.462 0.00 0.00 0.00 3.73
30 31 5.186215 TGTTTGATACTCTGGTGGATTACGA 59.814 40.000 0.00 0.00 0.00 3.43
31 32 5.291128 GTGTTTGATACTCTGGTGGATTACG 59.709 44.000 0.00 0.00 0.00 3.18
32 33 6.170506 TGTGTTTGATACTCTGGTGGATTAC 58.829 40.000 0.00 0.00 0.00 1.89
33 34 6.367374 TGTGTTTGATACTCTGGTGGATTA 57.633 37.500 0.00 0.00 0.00 1.75
34 35 5.241403 TGTGTTTGATACTCTGGTGGATT 57.759 39.130 0.00 0.00 0.00 3.01
35 36 4.908601 TGTGTTTGATACTCTGGTGGAT 57.091 40.909 0.00 0.00 0.00 3.41
36 37 4.908601 ATGTGTTTGATACTCTGGTGGA 57.091 40.909 0.00 0.00 0.00 4.02
37 38 4.093408 CGAATGTGTTTGATACTCTGGTGG 59.907 45.833 0.00 0.00 0.00 4.61
38 39 4.929211 TCGAATGTGTTTGATACTCTGGTG 59.071 41.667 0.00 0.00 0.00 4.17
39 40 5.147330 TCGAATGTGTTTGATACTCTGGT 57.853 39.130 0.00 0.00 0.00 4.00
40 41 6.092670 ACAATCGAATGTGTTTGATACTCTGG 59.907 38.462 5.06 0.00 37.45 3.86
41 42 7.065216 ACAATCGAATGTGTTTGATACTCTG 57.935 36.000 5.06 0.00 37.45 3.35
42 43 6.873605 TGACAATCGAATGTGTTTGATACTCT 59.126 34.615 11.63 0.00 37.45 3.24
43 44 6.955963 GTGACAATCGAATGTGTTTGATACTC 59.044 38.462 11.63 0.00 37.45 2.59
44 45 6.426633 TGTGACAATCGAATGTGTTTGATACT 59.573 34.615 11.63 0.00 37.45 2.12
45 46 6.598525 TGTGACAATCGAATGTGTTTGATAC 58.401 36.000 11.63 5.05 37.45 2.24
46 47 6.426633 ACTGTGACAATCGAATGTGTTTGATA 59.573 34.615 11.63 0.00 37.45 2.15
47 48 5.239306 ACTGTGACAATCGAATGTGTTTGAT 59.761 36.000 11.63 0.00 39.62 2.57
48 49 4.574421 ACTGTGACAATCGAATGTGTTTGA 59.426 37.500 11.63 0.00 32.57 2.69
49 50 4.847633 ACTGTGACAATCGAATGTGTTTG 58.152 39.130 11.63 1.36 32.57 2.93
50 51 5.525745 TGTACTGTGACAATCGAATGTGTTT 59.474 36.000 11.63 0.00 32.57 2.83
51 52 5.050363 GTGTACTGTGACAATCGAATGTGTT 60.050 40.000 11.63 0.00 32.57 3.32
52 53 4.447724 GTGTACTGTGACAATCGAATGTGT 59.552 41.667 11.63 5.09 32.57 3.72
53 54 4.447389 TGTGTACTGTGACAATCGAATGTG 59.553 41.667 11.63 1.46 32.57 3.21
54 55 4.447724 GTGTGTACTGTGACAATCGAATGT 59.552 41.667 5.65 5.65 35.90 2.71
55 56 4.143115 GGTGTGTACTGTGACAATCGAATG 60.143 45.833 0.00 0.00 0.00 2.67
56 57 3.994392 GGTGTGTACTGTGACAATCGAAT 59.006 43.478 0.00 0.00 0.00 3.34
57 58 3.181474 TGGTGTGTACTGTGACAATCGAA 60.181 43.478 0.00 0.00 0.00 3.71
58 59 2.362717 TGGTGTGTACTGTGACAATCGA 59.637 45.455 0.00 0.00 0.00 3.59
59 60 2.749776 TGGTGTGTACTGTGACAATCG 58.250 47.619 0.00 0.00 0.00 3.34
60 61 3.120199 GCATGGTGTGTACTGTGACAATC 60.120 47.826 0.00 0.00 0.00 2.67
61 62 2.813754 GCATGGTGTGTACTGTGACAAT 59.186 45.455 0.00 0.00 0.00 2.71
62 63 2.217750 GCATGGTGTGTACTGTGACAA 58.782 47.619 0.00 0.00 0.00 3.18
63 64 1.139853 TGCATGGTGTGTACTGTGACA 59.860 47.619 0.00 0.00 0.00 3.58
64 65 1.877637 TGCATGGTGTGTACTGTGAC 58.122 50.000 0.00 0.00 0.00 3.67
65 66 2.629336 TTGCATGGTGTGTACTGTGA 57.371 45.000 0.00 0.00 0.00 3.58
66 67 3.706802 TTTTGCATGGTGTGTACTGTG 57.293 42.857 0.00 0.00 0.00 3.66
67 68 4.458989 CCTATTTTGCATGGTGTGTACTGT 59.541 41.667 0.00 0.00 0.00 3.55
68 69 4.142403 CCCTATTTTGCATGGTGTGTACTG 60.142 45.833 0.00 0.00 0.00 2.74
69 70 4.016444 CCCTATTTTGCATGGTGTGTACT 58.984 43.478 0.00 0.00 0.00 2.73
70 71 3.130340 CCCCTATTTTGCATGGTGTGTAC 59.870 47.826 0.00 0.00 0.00 2.90
71 72 3.360867 CCCCTATTTTGCATGGTGTGTA 58.639 45.455 0.00 0.00 0.00 2.90
72 73 2.178580 CCCCTATTTTGCATGGTGTGT 58.821 47.619 0.00 0.00 0.00 3.72
73 74 1.134729 GCCCCTATTTTGCATGGTGTG 60.135 52.381 0.00 0.00 0.00 3.82
74 75 1.194218 GCCCCTATTTTGCATGGTGT 58.806 50.000 0.00 0.00 0.00 4.16
75 76 1.134729 GTGCCCCTATTTTGCATGGTG 60.135 52.381 0.00 0.00 37.34 4.17
76 77 1.194218 GTGCCCCTATTTTGCATGGT 58.806 50.000 0.00 0.00 37.34 3.55
77 78 1.193323 TGTGCCCCTATTTTGCATGG 58.807 50.000 0.00 0.00 37.34 3.66
78 79 3.199677 CATTGTGCCCCTATTTTGCATG 58.800 45.455 0.00 0.00 37.34 4.06
79 80 2.171027 CCATTGTGCCCCTATTTTGCAT 59.829 45.455 0.00 0.00 37.34 3.96
80 81 1.554160 CCATTGTGCCCCTATTTTGCA 59.446 47.619 0.00 0.00 0.00 4.08
81 82 1.830477 TCCATTGTGCCCCTATTTTGC 59.170 47.619 0.00 0.00 0.00 3.68
82 83 5.128499 TGTTATCCATTGTGCCCCTATTTTG 59.872 40.000 0.00 0.00 0.00 2.44
83 84 5.276440 TGTTATCCATTGTGCCCCTATTTT 58.724 37.500 0.00 0.00 0.00 1.82
84 85 4.877773 TGTTATCCATTGTGCCCCTATTT 58.122 39.130 0.00 0.00 0.00 1.40
85 86 4.534647 TGTTATCCATTGTGCCCCTATT 57.465 40.909 0.00 0.00 0.00 1.73
86 87 4.354987 AGATGTTATCCATTGTGCCCCTAT 59.645 41.667 0.00 0.00 32.56 2.57
87 88 3.721575 AGATGTTATCCATTGTGCCCCTA 59.278 43.478 0.00 0.00 32.56 3.53
88 89 2.515429 AGATGTTATCCATTGTGCCCCT 59.485 45.455 0.00 0.00 32.56 4.79
89 90 2.887152 GAGATGTTATCCATTGTGCCCC 59.113 50.000 0.00 0.00 32.56 5.80
90 91 3.817647 GAGAGATGTTATCCATTGTGCCC 59.182 47.826 0.00 0.00 32.56 5.36
91 92 4.712476 AGAGAGATGTTATCCATTGTGCC 58.288 43.478 0.00 0.00 32.56 5.01
92 93 5.609423 AGAGAGAGATGTTATCCATTGTGC 58.391 41.667 0.00 0.00 32.56 4.57
93 94 7.014518 AGAGAGAGAGAGATGTTATCCATTGTG 59.985 40.741 0.00 0.00 32.56 3.33
94 95 7.068702 AGAGAGAGAGAGATGTTATCCATTGT 58.931 38.462 0.00 0.00 32.56 2.71
95 96 7.449395 AGAGAGAGAGAGAGATGTTATCCATTG 59.551 40.741 0.00 0.00 32.56 2.82
96 97 7.529555 AGAGAGAGAGAGAGATGTTATCCATT 58.470 38.462 0.00 0.00 32.56 3.16
97 98 7.017950 AGAGAGAGAGAGAGAGATGTTATCCAT 59.982 40.741 0.00 0.00 36.13 3.41
98 99 6.329986 AGAGAGAGAGAGAGAGATGTTATCCA 59.670 42.308 0.00 0.00 0.00 3.41
99 100 6.773638 AGAGAGAGAGAGAGAGATGTTATCC 58.226 44.000 0.00 0.00 0.00 2.59
100 101 7.675062 AGAGAGAGAGAGAGAGAGATGTTATC 58.325 42.308 0.00 0.00 0.00 1.75
101 102 7.512058 AGAGAGAGAGAGAGAGAGAGATGTTAT 59.488 40.741 0.00 0.00 0.00 1.89
102 103 6.841229 AGAGAGAGAGAGAGAGAGAGATGTTA 59.159 42.308 0.00 0.00 0.00 2.41
103 104 5.664908 AGAGAGAGAGAGAGAGAGAGATGTT 59.335 44.000 0.00 0.00 0.00 2.71
104 105 5.215069 AGAGAGAGAGAGAGAGAGAGATGT 58.785 45.833 0.00 0.00 0.00 3.06
105 106 5.539574 AGAGAGAGAGAGAGAGAGAGAGATG 59.460 48.000 0.00 0.00 0.00 2.90
106 107 5.714863 AGAGAGAGAGAGAGAGAGAGAGAT 58.285 45.833 0.00 0.00 0.00 2.75
107 108 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
108 109 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
109 110 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
110 111 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
111 112 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
112 113 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
113 114 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
114 115 6.947733 AGATAGAGAGAGAGAGAGAGAGAGAG 59.052 46.154 0.00 0.00 0.00 3.20
115 116 6.857848 AGATAGAGAGAGAGAGAGAGAGAGA 58.142 44.000 0.00 0.00 0.00 3.10
116 117 6.947733 AGAGATAGAGAGAGAGAGAGAGAGAG 59.052 46.154 0.00 0.00 0.00 3.20
117 118 6.857848 AGAGATAGAGAGAGAGAGAGAGAGA 58.142 44.000 0.00 0.00 0.00 3.10
118 119 8.821686 ATAGAGATAGAGAGAGAGAGAGAGAG 57.178 42.308 0.00 0.00 0.00 3.20
119 120 8.619281 AGATAGAGATAGAGAGAGAGAGAGAGA 58.381 40.741 0.00 0.00 0.00 3.10
120 121 8.821686 AGATAGAGATAGAGAGAGAGAGAGAG 57.178 42.308 0.00 0.00 0.00 3.20
121 122 8.619281 AGAGATAGAGATAGAGAGAGAGAGAGA 58.381 40.741 0.00 0.00 0.00 3.10
122 123 8.821686 AGAGATAGAGATAGAGAGAGAGAGAG 57.178 42.308 0.00 0.00 0.00 3.20
123 124 8.619281 AGAGAGATAGAGATAGAGAGAGAGAGA 58.381 40.741 0.00 0.00 0.00 3.10
124 125 8.821686 AGAGAGATAGAGATAGAGAGAGAGAG 57.178 42.308 0.00 0.00 0.00 3.20
125 126 8.619281 AGAGAGAGATAGAGATAGAGAGAGAGA 58.381 40.741 0.00 0.00 0.00 3.10
126 127 8.821686 AGAGAGAGATAGAGATAGAGAGAGAG 57.178 42.308 0.00 0.00 0.00 3.20
127 128 8.619281 AGAGAGAGAGATAGAGATAGAGAGAGA 58.381 40.741 0.00 0.00 0.00 3.10
128 129 8.821686 AGAGAGAGAGATAGAGATAGAGAGAG 57.178 42.308 0.00 0.00 0.00 3.20
129 130 8.619281 AGAGAGAGAGAGATAGAGATAGAGAGA 58.381 40.741 0.00 0.00 0.00 3.10
130 131 8.821686 AGAGAGAGAGAGATAGAGATAGAGAG 57.178 42.308 0.00 0.00 0.00 3.20
131 132 8.619281 AGAGAGAGAGAGAGATAGAGATAGAGA 58.381 40.741 0.00 0.00 0.00 3.10
132 133 8.821686 AGAGAGAGAGAGAGATAGAGATAGAG 57.178 42.308 0.00 0.00 0.00 2.43
133 134 7.836685 GGAGAGAGAGAGAGAGATAGAGATAGA 59.163 44.444 0.00 0.00 0.00 1.98
134 135 7.069331 GGGAGAGAGAGAGAGAGATAGAGATAG 59.931 48.148 0.00 0.00 0.00 2.08
135 136 6.897966 GGGAGAGAGAGAGAGAGATAGAGATA 59.102 46.154 0.00 0.00 0.00 1.98
136 137 5.723887 GGGAGAGAGAGAGAGAGATAGAGAT 59.276 48.000 0.00 0.00 0.00 2.75
137 138 5.087323 GGGAGAGAGAGAGAGAGATAGAGA 58.913 50.000 0.00 0.00 0.00 3.10
138 139 5.090139 AGGGAGAGAGAGAGAGAGATAGAG 58.910 50.000 0.00 0.00 0.00 2.43
139 140 5.087323 GAGGGAGAGAGAGAGAGAGATAGA 58.913 50.000 0.00 0.00 0.00 1.98
140 141 5.090139 AGAGGGAGAGAGAGAGAGAGATAG 58.910 50.000 0.00 0.00 0.00 2.08
141 142 5.087323 GAGAGGGAGAGAGAGAGAGAGATA 58.913 50.000 0.00 0.00 0.00 1.98
142 143 3.906846 GAGAGGGAGAGAGAGAGAGAGAT 59.093 52.174 0.00 0.00 0.00 2.75
143 144 3.051803 AGAGAGGGAGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
144 145 3.312890 AGAGAGGGAGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
145 146 3.051803 AGAGAGAGGGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
146 147 3.312890 AGAGAGAGGGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
147 148 3.051803 AGAGAGAGAGGGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
148 149 3.312890 AGAGAGAGAGGGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
149 150 3.051803 AGAGAGAGAGAGGGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
150 151 3.312890 AGAGAGAGAGAGGGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
151 152 3.051803 AGAGAGAGAGAGAGGGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
152 153 3.312890 AGAGAGAGAGAGAGGGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
153 154 3.309296 GAGAGAGAGAGAGAGGGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
154 155 3.041211 TGAGAGAGAGAGAGAGGGAGAG 58.959 54.545 0.00 0.00 0.00 3.20
155 156 3.129262 TGAGAGAGAGAGAGAGGGAGA 57.871 52.381 0.00 0.00 0.00 3.71
156 157 4.139786 CAATGAGAGAGAGAGAGAGGGAG 58.860 52.174 0.00 0.00 0.00 4.30
157 158 3.688126 GCAATGAGAGAGAGAGAGAGGGA 60.688 52.174 0.00 0.00 0.00 4.20
158 159 2.624838 GCAATGAGAGAGAGAGAGAGGG 59.375 54.545 0.00 0.00 0.00 4.30
159 160 3.289836 TGCAATGAGAGAGAGAGAGAGG 58.710 50.000 0.00 0.00 0.00 3.69
160 161 5.286438 CAATGCAATGAGAGAGAGAGAGAG 58.714 45.833 0.00 0.00 0.00 3.20
161 162 4.441773 GCAATGCAATGAGAGAGAGAGAGA 60.442 45.833 5.79 0.00 0.00 3.10
162 163 3.805422 GCAATGCAATGAGAGAGAGAGAG 59.195 47.826 5.79 0.00 0.00 3.20
163 164 3.197116 TGCAATGCAATGAGAGAGAGAGA 59.803 43.478 5.01 0.00 34.76 3.10
164 165 3.532542 TGCAATGCAATGAGAGAGAGAG 58.467 45.455 5.01 0.00 34.76 3.20
165 166 3.055312 ACTGCAATGCAATGAGAGAGAGA 60.055 43.478 9.92 0.00 38.41 3.10
166 167 3.271729 ACTGCAATGCAATGAGAGAGAG 58.728 45.455 9.92 0.00 38.41 3.20
167 168 3.345508 ACTGCAATGCAATGAGAGAGA 57.654 42.857 9.92 0.00 38.41 3.10
168 169 4.413087 GAAACTGCAATGCAATGAGAGAG 58.587 43.478 9.92 0.00 38.41 3.20
169 170 3.192001 GGAAACTGCAATGCAATGAGAGA 59.808 43.478 9.92 0.00 38.41 3.10
170 171 3.057104 TGGAAACTGCAATGCAATGAGAG 60.057 43.478 9.92 2.84 38.41 3.20
171 172 2.892215 TGGAAACTGCAATGCAATGAGA 59.108 40.909 9.92 0.00 38.41 3.27
172 173 3.250744 CTGGAAACTGCAATGCAATGAG 58.749 45.455 9.92 0.00 38.41 2.90
173 174 3.306917 CTGGAAACTGCAATGCAATGA 57.693 42.857 9.92 0.00 38.41 2.57
213 214 9.425248 TCTCATTATGGAATAGCAGGAATTTTT 57.575 29.630 0.00 0.00 0.00 1.94
214 215 9.425248 TTCTCATTATGGAATAGCAGGAATTTT 57.575 29.630 0.00 0.00 0.00 1.82
215 216 9.425248 TTTCTCATTATGGAATAGCAGGAATTT 57.575 29.630 0.00 0.00 0.00 1.82
216 217 9.425248 TTTTCTCATTATGGAATAGCAGGAATT 57.575 29.630 0.00 0.00 0.00 2.17
217 218 8.854117 GTTTTCTCATTATGGAATAGCAGGAAT 58.146 33.333 0.00 0.00 0.00 3.01
218 219 7.285401 GGTTTTCTCATTATGGAATAGCAGGAA 59.715 37.037 0.00 0.00 0.00 3.36
228 229 5.076182 TGCACAAGGTTTTCTCATTATGGA 58.924 37.500 0.00 0.00 0.00 3.41
231 232 7.385752 CACATTTGCACAAGGTTTTCTCATTAT 59.614 33.333 0.00 0.00 0.00 1.28
236 237 4.432712 ACACATTTGCACAAGGTTTTCTC 58.567 39.130 0.00 0.00 0.00 2.87
262 263 5.686841 TGTTTGTTTCGATCTTGCATTTCTG 59.313 36.000 0.00 0.00 0.00 3.02
264 265 5.107875 GGTGTTTGTTTCGATCTTGCATTTC 60.108 40.000 0.00 0.00 0.00 2.17
269 270 3.347958 TGGTGTTTGTTTCGATCTTGC 57.652 42.857 0.00 0.00 0.00 4.01
327 328 4.116961 TGTACTACGGTGATTAAGCATGC 58.883 43.478 10.51 10.51 0.00 4.06
333 334 8.984764 GCAAATGATATGTACTACGGTGATTAA 58.015 33.333 0.00 0.00 0.00 1.40
347 348 9.193806 AGGTTCTAAATCTTGCAAATGATATGT 57.806 29.630 0.00 0.00 0.00 2.29
376 377 8.588472 AGGACTCCTTGGATTTAAAAAGATTTG 58.412 33.333 0.00 0.00 0.00 2.32
378 379 9.822727 TTAGGACTCCTTGGATTTAAAAAGATT 57.177 29.630 1.94 0.00 34.61 2.40
382 383 8.856103 CACTTTAGGACTCCTTGGATTTAAAAA 58.144 33.333 1.94 0.00 34.61 1.94
383 384 8.221944 TCACTTTAGGACTCCTTGGATTTAAAA 58.778 33.333 1.94 0.00 34.61 1.52
395 396 5.407407 TTGACTCATCACTTTAGGACTCC 57.593 43.478 0.00 0.00 33.38 3.85
396 397 6.876257 ACATTTGACTCATCACTTTAGGACTC 59.124 38.462 0.00 0.00 33.38 3.36
410 411 3.138884 TGGCAGCTAACATTTGACTCA 57.861 42.857 0.00 0.00 0.00 3.41
433 434 0.108851 ATGAGACACGCACGCACATA 60.109 50.000 0.00 0.00 0.00 2.29
450 451 4.049546 CCACTATCAAAATGTGGGCATG 57.950 45.455 0.00 0.00 45.29 4.06
456 457 7.819415 TCAGAGAACTACCACTATCAAAATGTG 59.181 37.037 0.00 0.00 0.00 3.21
480 481 7.392953 TGGCAAACATGACTAATCAAGTAATCA 59.607 33.333 0.00 0.00 35.75 2.57
481 482 7.761409 TGGCAAACATGACTAATCAAGTAATC 58.239 34.615 0.00 0.00 35.75 1.75
482 483 7.701539 TGGCAAACATGACTAATCAAGTAAT 57.298 32.000 0.00 0.00 35.75 1.89
483 484 7.701539 ATGGCAAACATGACTAATCAAGTAA 57.298 32.000 0.00 0.00 35.75 2.24
484 485 8.800370 TTATGGCAAACATGACTAATCAAGTA 57.200 30.769 0.00 0.00 40.82 2.24
485 486 7.701539 TTATGGCAAACATGACTAATCAAGT 57.298 32.000 0.00 0.00 40.82 3.16
486 487 8.984891 TTTTATGGCAAACATGACTAATCAAG 57.015 30.769 0.00 0.00 40.82 3.02
579 586 3.761752 GAGCTAGTATTTGCCCAAACCAA 59.238 43.478 0.00 0.00 32.51 3.67
583 590 3.016736 GCAGAGCTAGTATTTGCCCAAA 58.983 45.455 0.00 0.00 34.46 3.28
614 622 0.954452 AGAAAAACAGGCTGCTTCCG 59.046 50.000 15.89 0.00 0.00 4.30
684 692 5.006941 ACATTGTTGCATTTTTCACAGCTTC 59.993 36.000 0.00 0.00 0.00 3.86
685 693 4.877251 ACATTGTTGCATTTTTCACAGCTT 59.123 33.333 0.00 0.00 0.00 3.74
686 694 4.444536 ACATTGTTGCATTTTTCACAGCT 58.555 34.783 0.00 0.00 0.00 4.24
687 695 4.799419 ACATTGTTGCATTTTTCACAGC 57.201 36.364 0.00 0.00 0.00 4.40
688 696 7.697352 TCTTACATTGTTGCATTTTTCACAG 57.303 32.000 0.00 0.00 0.00 3.66
689 697 7.978414 TCTTCTTACATTGTTGCATTTTTCACA 59.022 29.630 0.00 0.00 0.00 3.58
690 698 8.351495 TCTTCTTACATTGTTGCATTTTTCAC 57.649 30.769 0.00 0.00 0.00 3.18
719 747 4.073293 ACGTCAAAGTGAAGAGGACAAT 57.927 40.909 0.00 0.00 30.40 2.71
739 767 0.881796 GGCAAGCCTAGGTGTGAAAC 59.118 55.000 11.31 0.13 37.35 2.78
927 969 2.610479 GCTGTGTGCTAGCTTGTGTCTA 60.610 50.000 17.23 0.00 38.14 2.59
1314 1371 0.463116 ACGTCGGCTTGAACAGGTTT 60.463 50.000 0.00 0.00 0.00 3.27
1315 1372 0.390124 TACGTCGGCTTGAACAGGTT 59.610 50.000 0.00 0.00 0.00 3.50
1320 1377 2.090524 CGGGTACGTCGGCTTGAAC 61.091 63.158 0.00 0.00 34.81 3.18
1514 1571 4.680237 CGTGGAAGGTGCTGGCGA 62.680 66.667 0.00 0.00 0.00 5.54
1599 1658 6.483307 TGCACTGATTAATATCCAACACTAGC 59.517 38.462 0.00 0.00 0.00 3.42
1600 1659 8.613060 ATGCACTGATTAATATCCAACACTAG 57.387 34.615 0.00 0.00 0.00 2.57
1602 1661 9.006839 CATATGCACTGATTAATATCCAACACT 57.993 33.333 0.00 0.00 0.00 3.55
1628 1691 1.859080 ACGAGAGCTGACGAAAACAAC 59.141 47.619 14.56 0.00 0.00 3.32
2047 2127 2.649034 GACCTGCTCGTCCGTCAA 59.351 61.111 0.00 0.00 0.00 3.18
2187 2267 4.812476 TTGGCCTCGTGGATCGCG 62.812 66.667 7.92 0.00 39.67 5.87
2517 2602 2.865551 CAAATTAAATCCCATGCACGGC 59.134 45.455 0.00 0.00 0.00 5.68
2562 2647 2.442212 TTTTACGTCAGGTCGCATCA 57.558 45.000 0.00 0.00 0.00 3.07
2788 2873 6.508404 CGAAAGGAACAATTTTTCAGTTGCTG 60.508 38.462 6.67 0.00 42.00 4.41
2867 2964 2.519377 TCACCAGGTTACTGTTGTCG 57.481 50.000 0.00 0.00 43.36 4.35
2868 2965 4.387862 CGTATTCACCAGGTTACTGTTGTC 59.612 45.833 0.00 0.00 43.36 3.18
2869 2966 4.312443 CGTATTCACCAGGTTACTGTTGT 58.688 43.478 0.00 0.00 43.36 3.32
2870 2967 3.682858 CCGTATTCACCAGGTTACTGTTG 59.317 47.826 0.00 0.00 43.36 3.33
2871 2968 3.325716 ACCGTATTCACCAGGTTACTGTT 59.674 43.478 0.00 0.00 43.36 3.16
2872 2969 2.901839 ACCGTATTCACCAGGTTACTGT 59.098 45.455 0.00 0.00 43.36 3.55
2873 2970 3.259064 CACCGTATTCACCAGGTTACTG 58.741 50.000 0.00 0.00 44.51 2.74
2874 2971 2.901839 ACACCGTATTCACCAGGTTACT 59.098 45.455 0.00 0.00 34.25 2.24
2875 2972 3.323751 ACACCGTATTCACCAGGTTAC 57.676 47.619 0.00 0.00 34.25 2.50
2876 2973 5.480642 TTAACACCGTATTCACCAGGTTA 57.519 39.130 0.00 0.00 34.25 2.85
2877 2974 2.943036 AACACCGTATTCACCAGGTT 57.057 45.000 0.00 0.00 34.25 3.50
2878 2975 4.354893 TTTAACACCGTATTCACCAGGT 57.645 40.909 0.00 0.00 37.49 4.00
2902 2999 4.660789 AACCGTGTTCAAGTAGTGTACT 57.339 40.909 0.00 0.00 41.73 2.73
2903 3000 6.826893 TTTAACCGTGTTCAAGTAGTGTAC 57.173 37.500 0.00 0.00 0.00 2.90
2904 3001 7.436118 AGATTTAACCGTGTTCAAGTAGTGTA 58.564 34.615 0.00 0.00 0.00 2.90
2905 3002 6.285990 AGATTTAACCGTGTTCAAGTAGTGT 58.714 36.000 0.00 0.00 0.00 3.55
2906 3003 6.780706 AGATTTAACCGTGTTCAAGTAGTG 57.219 37.500 0.00 0.00 0.00 2.74
2907 3004 6.987992 TCAAGATTTAACCGTGTTCAAGTAGT 59.012 34.615 0.00 0.00 0.00 2.73
2908 3005 7.288672 GTCAAGATTTAACCGTGTTCAAGTAG 58.711 38.462 0.00 0.00 0.00 2.57
2909 3006 6.074195 CGTCAAGATTTAACCGTGTTCAAGTA 60.074 38.462 0.00 0.00 0.00 2.24
2966 3063 5.497474 TCTACTAATCTGGGGAAACAAAGC 58.503 41.667 0.00 0.00 0.00 3.51
2975 3072 3.041946 AGTTGGCTCTACTAATCTGGGG 58.958 50.000 0.00 0.00 0.00 4.96
3006 3104 4.728772 TCACCACCACAAGAAAATGAGAT 58.271 39.130 0.00 0.00 0.00 2.75
3027 3125 2.126346 GCGCCACCTGCATGTTTC 60.126 61.111 0.00 0.00 41.33 2.78
3329 3435 2.162208 CCGGGTTTTCATGACATGACAG 59.838 50.000 17.77 7.20 39.39 3.51
3430 3549 3.119101 CCGATTTAGTACCACAGCTGTCT 60.119 47.826 18.64 13.70 0.00 3.41
3452 3578 2.848071 TCACCCCCATTCCTACCTAAAC 59.152 50.000 0.00 0.00 0.00 2.01
3625 3751 1.912110 GTCGTAGTTGTCATCAGTCGC 59.088 52.381 0.00 0.00 0.00 5.19
3718 3844 3.434984 GCCACAACAACAACAACAACAAT 59.565 39.130 0.00 0.00 0.00 2.71
3722 3848 2.820059 TGCCACAACAACAACAACAA 57.180 40.000 0.00 0.00 0.00 2.83
3724 3850 3.520569 AGAATGCCACAACAACAACAAC 58.479 40.909 0.00 0.00 0.00 3.32
3732 3858 3.582647 TCCTAGAGAAGAATGCCACAACA 59.417 43.478 0.00 0.00 0.00 3.33
3733 3859 4.207891 TCCTAGAGAAGAATGCCACAAC 57.792 45.455 0.00 0.00 0.00 3.32
3734 3860 4.908601 TTCCTAGAGAAGAATGCCACAA 57.091 40.909 0.00 0.00 0.00 3.33
3735 3861 4.908601 TTTCCTAGAGAAGAATGCCACA 57.091 40.909 0.00 0.00 35.40 4.17
3736 3862 5.882557 TGATTTTCCTAGAGAAGAATGCCAC 59.117 40.000 0.00 0.00 35.40 5.01
3737 3863 6.065976 TGATTTTCCTAGAGAAGAATGCCA 57.934 37.500 0.00 0.00 35.40 4.92
3752 3878 9.617975 CTGTTGTTTCTTCTCTAATGATTTTCC 57.382 33.333 0.00 0.00 0.00 3.13
3779 3905 5.475719 TCATCGTCATCCTAAAAAGTCGTT 58.524 37.500 0.00 0.00 0.00 3.85
3851 3982 2.356135 AGGAAGCGTCATTTTATGCGT 58.644 42.857 1.14 0.00 36.47 5.24
3853 3984 5.062183 GGAAAAAGGAAGCGTCATTTTATGC 59.938 40.000 21.86 14.94 44.65 3.14
3917 4048 3.368236 GCTTTCGAGTTATGAGTGTGGTC 59.632 47.826 0.00 0.00 0.00 4.02
3924 4055 3.118956 AGAGGGTGCTTTCGAGTTATGAG 60.119 47.826 0.00 0.00 0.00 2.90
3925 4056 2.832129 AGAGGGTGCTTTCGAGTTATGA 59.168 45.455 0.00 0.00 0.00 2.15
3926 4057 3.118956 AGAGAGGGTGCTTTCGAGTTATG 60.119 47.826 0.00 0.00 0.00 1.90
3927 4058 3.100671 AGAGAGGGTGCTTTCGAGTTAT 58.899 45.455 0.00 0.00 0.00 1.89
3928 4059 2.492484 GAGAGAGGGTGCTTTCGAGTTA 59.508 50.000 0.00 0.00 0.00 2.24
3929 4060 1.273886 GAGAGAGGGTGCTTTCGAGTT 59.726 52.381 0.00 0.00 0.00 3.01
3930 4061 0.892063 GAGAGAGGGTGCTTTCGAGT 59.108 55.000 0.00 0.00 0.00 4.18
3940 4071 3.041946 GAGAGAGAGAGAGAGAGAGGGT 58.958 54.545 0.00 0.00 0.00 4.34
3944 4075 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3946 4077 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3948 4079 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3971 4203 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3972 4204 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
3973 4205 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
3974 4206 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
3975 4207 3.323403 GGGAGAGAGAGAGAGAGAGAGAG 59.677 56.522 0.00 0.00 0.00 3.20
3976 4208 3.309296 GGGAGAGAGAGAGAGAGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
3977 4209 3.041211 TGGGAGAGAGAGAGAGAGAGAG 58.959 54.545 0.00 0.00 0.00 3.20
3978 4210 3.129262 TGGGAGAGAGAGAGAGAGAGA 57.871 52.381 0.00 0.00 0.00 3.10
3979 4211 3.545703 GTTGGGAGAGAGAGAGAGAGAG 58.454 54.545 0.00 0.00 0.00 3.20
3980 4212 2.093181 CGTTGGGAGAGAGAGAGAGAGA 60.093 54.545 0.00 0.00 0.00 3.10
3981 4213 2.288666 CGTTGGGAGAGAGAGAGAGAG 58.711 57.143 0.00 0.00 0.00 3.20
3982 4214 1.065053 CCGTTGGGAGAGAGAGAGAGA 60.065 57.143 0.00 0.00 34.06 3.10
3983 4215 1.340600 ACCGTTGGGAGAGAGAGAGAG 60.341 57.143 0.00 0.00 36.97 3.20
3984 4216 0.699399 ACCGTTGGGAGAGAGAGAGA 59.301 55.000 0.00 0.00 36.97 3.10
3985 4217 1.099689 GACCGTTGGGAGAGAGAGAG 58.900 60.000 0.00 0.00 36.97 3.20
3986 4218 0.699399 AGACCGTTGGGAGAGAGAGA 59.301 55.000 0.00 0.00 36.97 3.10
3987 4219 1.551452 AAGACCGTTGGGAGAGAGAG 58.449 55.000 0.00 0.00 36.97 3.20
3988 4220 2.620886 CCTAAGACCGTTGGGAGAGAGA 60.621 54.545 0.00 0.00 36.97 3.10
3989 4221 1.751924 CCTAAGACCGTTGGGAGAGAG 59.248 57.143 0.00 0.00 36.97 3.20
3990 4222 1.618888 CCCTAAGACCGTTGGGAGAGA 60.619 57.143 0.00 0.00 42.11 3.10
3991 4223 0.824759 CCCTAAGACCGTTGGGAGAG 59.175 60.000 0.00 0.00 42.11 3.20
3992 4224 0.410663 TCCCTAAGACCGTTGGGAGA 59.589 55.000 1.66 0.00 43.20 3.71
3993 4225 2.986492 TCCCTAAGACCGTTGGGAG 58.014 57.895 1.66 0.00 43.20 4.30
3994 4226 0.410663 TCTCCCTAAGACCGTTGGGA 59.589 55.000 5.29 5.29 45.58 4.37
3995 4227 1.413077 GATCTCCCTAAGACCGTTGGG 59.587 57.143 0.00 0.00 36.65 4.12
4112 4344 0.399075 GGAGAAGGAAACCCAACCGA 59.601 55.000 0.00 0.00 0.00 4.69
4173 4405 0.605319 TGGCTTTCGATGAACCGCTT 60.605 50.000 0.00 0.00 0.00 4.68
4192 4424 1.492993 GGTCCTTCACTTGGCTCCCT 61.493 60.000 0.00 0.00 0.00 4.20
4200 4432 1.204941 CCTCGAATCGGTCCTTCACTT 59.795 52.381 1.76 0.00 0.00 3.16
4205 4437 0.033405 TCCTCCTCGAATCGGTCCTT 60.033 55.000 1.76 0.00 0.00 3.36
4224 4456 0.552615 AGGGGAACATACCAGGCCTT 60.553 55.000 0.00 0.00 0.00 4.35
4316 4548 4.087892 CTCACAGCCCCACCTCCG 62.088 72.222 0.00 0.00 0.00 4.63
4387 4651 0.920763 ATCCCCATGGGCAGAACTGA 60.921 55.000 26.87 15.50 43.94 3.41
4421 4685 3.843027 CTCCTCCTGCATATACCTCCAAT 59.157 47.826 0.00 0.00 0.00 3.16
4430 4694 1.142465 CTTGCACCTCCTCCTGCATAT 59.858 52.381 0.00 0.00 42.86 1.78
4444 4708 0.670162 TTTCTCCAGCTTGCTTGCAC 59.330 50.000 0.00 0.00 34.99 4.57
4513 4777 5.618236 CATCCATAGTCACAATGATCACCT 58.382 41.667 0.00 0.00 0.00 4.00
4543 4807 5.988310 AAAACATCTTGCAATCTCATCCA 57.012 34.783 0.00 0.00 0.00 3.41
4565 4829 0.117340 CCATACCCCCACCCCAAAAA 59.883 55.000 0.00 0.00 0.00 1.94
4566 4830 0.780494 TCCATACCCCCACCCCAAAA 60.780 55.000 0.00 0.00 0.00 2.44
4567 4831 0.556380 ATCCATACCCCCACCCCAAA 60.556 55.000 0.00 0.00 0.00 3.28
4568 4832 0.350904 TATCCATACCCCCACCCCAA 59.649 55.000 0.00 0.00 0.00 4.12
4569 4833 0.581040 ATATCCATACCCCCACCCCA 59.419 55.000 0.00 0.00 0.00 4.96
4570 4834 1.768265 AATATCCATACCCCCACCCC 58.232 55.000 0.00 0.00 0.00 4.95
4571 4835 4.180723 TCTTAATATCCATACCCCCACCC 58.819 47.826 0.00 0.00 0.00 4.61
4572 4836 6.402981 AATCTTAATATCCATACCCCCACC 57.597 41.667 0.00 0.00 0.00 4.61
4573 4837 8.053355 CCTAAATCTTAATATCCATACCCCCAC 58.947 40.741 0.00 0.00 0.00 4.61
4574 4838 7.312311 GCCTAAATCTTAATATCCATACCCCCA 60.312 40.741 0.00 0.00 0.00 4.96
4575 4839 7.061054 GCCTAAATCTTAATATCCATACCCCC 58.939 42.308 0.00 0.00 0.00 5.40
4576 4840 6.766467 CGCCTAAATCTTAATATCCATACCCC 59.234 42.308 0.00 0.00 0.00 4.95
4577 4841 7.562135 TCGCCTAAATCTTAATATCCATACCC 58.438 38.462 0.00 0.00 0.00 3.69
4578 4842 9.046296 CATCGCCTAAATCTTAATATCCATACC 57.954 37.037 0.00 0.00 0.00 2.73
4579 4843 9.046296 CCATCGCCTAAATCTTAATATCCATAC 57.954 37.037 0.00 0.00 0.00 2.39
4580 4844 8.988060 TCCATCGCCTAAATCTTAATATCCATA 58.012 33.333 0.00 0.00 0.00 2.74
4581 4845 7.861629 TCCATCGCCTAAATCTTAATATCCAT 58.138 34.615 0.00 0.00 0.00 3.41
4582 4846 7.252612 TCCATCGCCTAAATCTTAATATCCA 57.747 36.000 0.00 0.00 0.00 3.41
4583 4847 6.763610 CCTCCATCGCCTAAATCTTAATATCC 59.236 42.308 0.00 0.00 0.00 2.59
4584 4848 7.556844 TCCTCCATCGCCTAAATCTTAATATC 58.443 38.462 0.00 0.00 0.00 1.63
4585 4849 7.365117 CCTCCTCCATCGCCTAAATCTTAATAT 60.365 40.741 0.00 0.00 0.00 1.28
4586 4850 6.070767 CCTCCTCCATCGCCTAAATCTTAATA 60.071 42.308 0.00 0.00 0.00 0.98
4587 4851 5.280215 CCTCCTCCATCGCCTAAATCTTAAT 60.280 44.000 0.00 0.00 0.00 1.40
4588 4852 4.040461 CCTCCTCCATCGCCTAAATCTTAA 59.960 45.833 0.00 0.00 0.00 1.85
4589 4853 3.578716 CCTCCTCCATCGCCTAAATCTTA 59.421 47.826 0.00 0.00 0.00 2.10
4590 4854 2.370189 CCTCCTCCATCGCCTAAATCTT 59.630 50.000 0.00 0.00 0.00 2.40
4591 4855 1.974236 CCTCCTCCATCGCCTAAATCT 59.026 52.381 0.00 0.00 0.00 2.40
4592 4856 1.609320 GCCTCCTCCATCGCCTAAATC 60.609 57.143 0.00 0.00 0.00 2.17
4593 4857 0.398318 GCCTCCTCCATCGCCTAAAT 59.602 55.000 0.00 0.00 0.00 1.40
4594 4858 1.830145 GCCTCCTCCATCGCCTAAA 59.170 57.895 0.00 0.00 0.00 1.85
4595 4859 2.498941 CGCCTCCTCCATCGCCTAA 61.499 63.158 0.00 0.00 0.00 2.69
4596 4860 2.912542 CGCCTCCTCCATCGCCTA 60.913 66.667 0.00 0.00 0.00 3.93
4599 4863 3.170490 AATCCGCCTCCTCCATCGC 62.170 63.158 0.00 0.00 0.00 4.58
4600 4864 1.005630 GAATCCGCCTCCTCCATCG 60.006 63.158 0.00 0.00 0.00 3.84
4601 4865 0.034616 CTGAATCCGCCTCCTCCATC 59.965 60.000 0.00 0.00 0.00 3.51
4602 4866 2.049627 GCTGAATCCGCCTCCTCCAT 62.050 60.000 0.00 0.00 0.00 3.41
4603 4867 2.735772 GCTGAATCCGCCTCCTCCA 61.736 63.158 0.00 0.00 0.00 3.86
4604 4868 2.110006 GCTGAATCCGCCTCCTCC 59.890 66.667 0.00 0.00 0.00 4.30
4605 4869 0.392998 TTTGCTGAATCCGCCTCCTC 60.393 55.000 0.00 0.00 0.00 3.71
4606 4870 0.257039 ATTTGCTGAATCCGCCTCCT 59.743 50.000 0.00 0.00 0.00 3.69
4607 4871 0.665298 GATTTGCTGAATCCGCCTCC 59.335 55.000 0.00 0.00 38.57 4.30
4608 4872 1.673168 AGATTTGCTGAATCCGCCTC 58.327 50.000 8.99 0.00 44.32 4.70
4609 4873 2.171448 ACTAGATTTGCTGAATCCGCCT 59.829 45.455 0.00 0.00 44.32 5.52
4610 4874 2.545946 GACTAGATTTGCTGAATCCGCC 59.454 50.000 0.00 0.00 44.32 6.13
4611 4875 2.545946 GGACTAGATTTGCTGAATCCGC 59.454 50.000 0.00 0.00 44.32 5.54
4612 4876 3.797039 TGGACTAGATTTGCTGAATCCG 58.203 45.455 0.00 4.98 44.32 4.18
4613 4877 3.563390 GCTGGACTAGATTTGCTGAATCC 59.437 47.826 0.00 0.00 44.32 3.01
4614 4878 3.247173 CGCTGGACTAGATTTGCTGAATC 59.753 47.826 0.00 5.55 43.71 2.52
4615 4879 3.201290 CGCTGGACTAGATTTGCTGAAT 58.799 45.455 0.00 0.00 0.00 2.57
4616 4880 2.028112 ACGCTGGACTAGATTTGCTGAA 60.028 45.455 0.00 0.00 0.00 3.02
4617 4881 1.550524 ACGCTGGACTAGATTTGCTGA 59.449 47.619 0.00 0.00 0.00 4.26
4618 4882 1.662629 CACGCTGGACTAGATTTGCTG 59.337 52.381 0.00 0.00 0.00 4.41
4619 4883 2.009042 GCACGCTGGACTAGATTTGCT 61.009 52.381 0.00 0.00 0.00 3.91
4620 4884 0.375106 GCACGCTGGACTAGATTTGC 59.625 55.000 0.00 0.00 0.00 3.68
4621 4885 1.929836 GAGCACGCTGGACTAGATTTG 59.070 52.381 0.00 0.00 0.00 2.32
4622 4886 1.469940 CGAGCACGCTGGACTAGATTT 60.470 52.381 0.00 0.00 0.00 2.17
4623 4887 0.101399 CGAGCACGCTGGACTAGATT 59.899 55.000 0.00 0.00 0.00 2.40
4624 4888 1.730487 CGAGCACGCTGGACTAGAT 59.270 57.895 0.00 0.00 0.00 1.98
4625 4889 3.188011 CGAGCACGCTGGACTAGA 58.812 61.111 0.00 0.00 0.00 2.43
4635 4899 4.093952 CAAAGCCTGGCGAGCACG 62.094 66.667 13.96 0.00 42.93 5.34
4636 4900 1.026718 ATACAAAGCCTGGCGAGCAC 61.027 55.000 13.96 0.00 0.00 4.40
4637 4901 0.322456 AATACAAAGCCTGGCGAGCA 60.322 50.000 13.96 0.00 0.00 4.26
4638 4902 1.330829 GTAATACAAAGCCTGGCGAGC 59.669 52.381 13.96 0.00 0.00 5.03
4639 4903 2.866762 GAGTAATACAAAGCCTGGCGAG 59.133 50.000 13.96 9.68 0.00 5.03
4640 4904 2.419574 GGAGTAATACAAAGCCTGGCGA 60.420 50.000 13.96 0.00 0.00 5.54
4641 4905 1.940613 GGAGTAATACAAAGCCTGGCG 59.059 52.381 13.96 1.26 0.00 5.69
4642 4906 2.999331 TGGAGTAATACAAAGCCTGGC 58.001 47.619 11.65 11.65 0.00 4.85
4643 4907 4.843728 TCTTGGAGTAATACAAAGCCTGG 58.156 43.478 0.00 0.00 0.00 4.45
4644 4908 4.333926 GCTCTTGGAGTAATACAAAGCCTG 59.666 45.833 9.69 0.00 31.39 4.85
4645 4909 4.518249 GCTCTTGGAGTAATACAAAGCCT 58.482 43.478 9.69 0.00 31.39 4.58
4646 4910 3.309954 CGCTCTTGGAGTAATACAAAGCC 59.690 47.826 13.17 0.00 31.39 4.35
4647 4911 3.309954 CCGCTCTTGGAGTAATACAAAGC 59.690 47.826 10.41 10.41 31.39 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.