Multiple sequence alignment - TraesCS5B01G231400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G231400 chr5B 100.000 2703 0 0 1 2703 408223799 408226501 0.000000e+00 4992.0
1 TraesCS5B01G231400 chr6B 98.001 2051 15 9 623 2672 691340270 691342295 0.000000e+00 3537.0
2 TraesCS5B01G231400 chr6B 94.521 292 15 1 1 292 535772731 535772441 1.480000e-122 449.0
3 TraesCS5B01G231400 chr6B 83.556 523 41 17 1660 2156 424071182 424071685 5.310000e-122 448.0
4 TraesCS5B01G231400 chr6B 81.707 164 28 2 2511 2672 14776846 14777009 4.690000e-28 135.0
5 TraesCS5B01G231400 chr3A 92.196 1448 92 11 1243 2673 705291153 705292596 0.000000e+00 2028.0
6 TraesCS5B01G231400 chr3A 96.786 280 9 0 1 280 710709263 710709542 4.070000e-128 468.0
7 TraesCS5B01G231400 chr3A 96.429 280 10 0 1 280 700723588 700723309 1.900000e-126 462.0
8 TraesCS5B01G231400 chr3A 74.164 329 67 15 626 949 705290701 705291016 1.310000e-23 121.0
9 TraesCS5B01G231400 chr7D 86.331 556 64 11 622 1171 25579484 25580033 1.790000e-166 595.0
10 TraesCS5B01G231400 chr6A 93.059 389 23 4 1243 1628 57426624 57427011 1.400000e-157 566.0
11 TraesCS5B01G231400 chr6A 96.071 280 11 0 1 280 584038468 584038747 8.820000e-125 457.0
12 TraesCS5B01G231400 chr6A 90.566 53 3 2 898 949 57426436 57426487 4.830000e-08 69.4
13 TraesCS5B01G231400 chr1B 84.962 532 43 15 1660 2165 353272558 353272038 3.110000e-139 505.0
14 TraesCS5B01G231400 chr1B 96.429 280 10 0 1 280 675768841 675769120 1.900000e-126 462.0
15 TraesCS5B01G231400 chr1B 88.968 281 24 1 2199 2472 353271765 353271485 9.270000e-90 340.0
16 TraesCS5B01G231400 chrUn 85.086 523 42 16 1660 2156 363669385 363669897 4.020000e-138 501.0
17 TraesCS5B01G231400 chr3B 84.774 532 45 16 1660 2165 680233917 680233396 4.020000e-138 501.0
18 TraesCS5B01G231400 chr3B 85.086 523 42 16 1660 2156 733623198 733623710 4.020000e-138 501.0
19 TraesCS5B01G231400 chr3B 81.098 164 29 2 2511 2672 807595119 807594956 2.180000e-26 130.0
20 TraesCS5B01G231400 chr7A 84.895 523 43 16 1660 2156 608483619 608484131 1.870000e-136 496.0
21 TraesCS5B01G231400 chr7A 97.143 280 8 0 1 280 8660192 8660471 8.760000e-130 473.0
22 TraesCS5B01G231400 chr4B 84.211 532 48 16 1660 2165 396523543 396523022 4.050000e-133 484.0
23 TraesCS5B01G231400 chr4B 96.429 280 10 0 1 280 40215253 40215532 1.900000e-126 462.0
24 TraesCS5B01G231400 chr4B 81.818 165 28 2 2511 2673 237990530 237990366 1.310000e-28 137.0
25 TraesCS5B01G231400 chr2B 96.786 280 9 0 1 280 72185030 72185309 4.070000e-128 468.0
26 TraesCS5B01G231400 chr2B 88.710 186 16 4 1041 1223 773086822 773087005 3.500000e-54 222.0
27 TraesCS5B01G231400 chr2B 87.097 186 24 0 993 1178 794583622 794583437 7.580000e-51 211.0
28 TraesCS5B01G231400 chr2B 82.781 151 15 9 1288 1433 676939374 676939230 1.020000e-24 124.0
29 TraesCS5B01G231400 chr4A 96.429 280 10 0 1 280 666202275 666201996 1.900000e-126 462.0
30 TraesCS5B01G231400 chr7B 88.889 279 24 1 2199 2470 654305803 654306081 1.200000e-88 337.0
31 TraesCS5B01G231400 chr5A 83.799 358 37 14 1630 1983 502030214 502029874 1.210000e-83 320.0
32 TraesCS5B01G231400 chr5A 89.474 76 2 3 521 596 447657027 447656958 1.030000e-14 91.6
33 TraesCS5B01G231400 chr5A 100.000 28 0 0 483 510 447657054 447657027 5.000000e-03 52.8
34 TraesCS5B01G231400 chr5D 91.549 213 13 4 279 486 343950349 343950137 3.410000e-74 289.0
35 TraesCS5B01G231400 chr2A 92.308 52 4 0 1297 1348 22110069 22110018 1.040000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G231400 chr5B 408223799 408226501 2702 False 4992.0 4992 100.0000 1 2703 1 chr5B.!!$F1 2702
1 TraesCS5B01G231400 chr6B 691340270 691342295 2025 False 3537.0 3537 98.0010 623 2672 1 chr6B.!!$F3 2049
2 TraesCS5B01G231400 chr6B 424071182 424071685 503 False 448.0 448 83.5560 1660 2156 1 chr6B.!!$F2 496
3 TraesCS5B01G231400 chr3A 705290701 705292596 1895 False 1074.5 2028 83.1800 626 2673 2 chr3A.!!$F2 2047
4 TraesCS5B01G231400 chr7D 25579484 25580033 549 False 595.0 595 86.3310 622 1171 1 chr7D.!!$F1 549
5 TraesCS5B01G231400 chr6A 57426436 57427011 575 False 317.7 566 91.8125 898 1628 2 chr6A.!!$F2 730
6 TraesCS5B01G231400 chr1B 353271485 353272558 1073 True 422.5 505 86.9650 1660 2472 2 chr1B.!!$R1 812
7 TraesCS5B01G231400 chrUn 363669385 363669897 512 False 501.0 501 85.0860 1660 2156 1 chrUn.!!$F1 496
8 TraesCS5B01G231400 chr3B 680233396 680233917 521 True 501.0 501 84.7740 1660 2165 1 chr3B.!!$R1 505
9 TraesCS5B01G231400 chr3B 733623198 733623710 512 False 501.0 501 85.0860 1660 2156 1 chr3B.!!$F1 496
10 TraesCS5B01G231400 chr7A 608483619 608484131 512 False 496.0 496 84.8950 1660 2156 1 chr7A.!!$F2 496
11 TraesCS5B01G231400 chr4B 396523022 396523543 521 True 484.0 484 84.2110 1660 2165 1 chr4B.!!$R2 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
360 361 0.023229 CGTGTACAAGTATGCGCACG 59.977 55.0 14.9 3.26 44.91 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2618 2931 2.562738 CCACCGATATCTATGCCTCACA 59.437 50.0 0.34 0.0 0.0 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
22 23 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
23 24 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
24 25 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
25 26 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
26 27 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
27 28 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
28 29 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
29 30 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
30 31 2.509052 ATACACGCGCATACACTCAT 57.491 45.000 5.73 0.00 0.00 2.90
31 32 1.835121 TACACGCGCATACACTCATC 58.165 50.000 5.73 0.00 0.00 2.92
32 33 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
33 34 1.227263 ACGCGCATACACTCATCCC 60.227 57.895 5.73 0.00 0.00 3.85
34 35 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
35 36 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
36 37 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
37 38 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
38 39 2.029020 GCGCATACACTCATCCCTATGA 60.029 50.000 0.30 0.00 39.87 2.15
39 40 3.554960 GCGCATACACTCATCCCTATGAA 60.555 47.826 0.30 0.00 41.57 2.57
40 41 3.990469 CGCATACACTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
41 42 3.990469 GCATACACTCATCCCTATGAACG 59.010 47.826 0.00 0.00 41.57 3.95
42 43 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
43 44 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
44 45 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
45 46 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
46 47 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
47 48 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
48 49 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
49 50 0.389296 TCCCTATGAACGCACACACG 60.389 55.000 0.00 0.00 39.50 4.49
50 51 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
51 52 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
52 53 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
53 54 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
54 55 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
55 56 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
58 59 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
59 60 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
60 61 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
61 62 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
62 63 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
63 64 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
64 65 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
65 66 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
66 67 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
67 68 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
68 69 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
69 70 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
70 71 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
71 72 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
72 73 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
73 74 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
74 75 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
75 76 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
76 77 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
77 78 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
78 79 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
79 80 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
80 81 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
81 82 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
82 83 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
83 84 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
84 85 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
85 86 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
86 87 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
87 88 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
88 89 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
89 90 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
90 91 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
91 92 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
92 93 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
93 94 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
94 95 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
95 96 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
96 97 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
97 98 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
98 99 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
99 100 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
100 101 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
101 102 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
102 103 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
103 104 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
104 105 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
105 106 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
106 107 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
107 108 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
108 109 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
109 110 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
110 111 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
111 112 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
112 113 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
113 114 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
114 115 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
115 116 7.232994 GCATATCATCTTGAGATTTACGAAGC 58.767 38.462 0.00 0.00 31.21 3.86
116 117 7.623089 GCATATCATCTTGAGATTTACGAAGCC 60.623 40.741 0.00 0.00 31.21 4.35
117 118 5.084818 TCATCTTGAGATTTACGAAGCCA 57.915 39.130 0.00 0.00 31.21 4.75
118 119 4.870426 TCATCTTGAGATTTACGAAGCCAC 59.130 41.667 0.00 0.00 31.21 5.01
119 120 3.596214 TCTTGAGATTTACGAAGCCACC 58.404 45.455 0.00 0.00 0.00 4.61
120 121 2.004583 TGAGATTTACGAAGCCACCG 57.995 50.000 0.00 0.00 0.00 4.94
121 122 1.274167 TGAGATTTACGAAGCCACCGT 59.726 47.619 0.00 0.00 43.26 4.83
122 123 2.492881 TGAGATTTACGAAGCCACCGTA 59.507 45.455 0.00 0.00 40.95 4.02
123 124 3.114065 GAGATTTACGAAGCCACCGTAG 58.886 50.000 0.00 0.00 42.42 3.51
124 125 1.591619 GATTTACGAAGCCACCGTAGC 59.408 52.381 0.00 0.00 42.42 3.58
125 126 0.390209 TTTACGAAGCCACCGTAGCC 60.390 55.000 0.00 0.00 42.42 3.93
126 127 2.546645 TTACGAAGCCACCGTAGCCG 62.547 60.000 0.00 0.00 42.42 5.52
133 134 4.849329 CACCGTAGCCGCCTCGTC 62.849 72.222 4.55 0.00 0.00 4.20
136 137 4.883300 CGTAGCCGCCTCGTCGTC 62.883 72.222 0.00 0.00 0.00 4.20
137 138 4.883300 GTAGCCGCCTCGTCGTCG 62.883 72.222 0.00 0.00 38.55 5.12
158 159 2.363297 GGAAACGTCTCCTCCCACT 58.637 57.895 0.00 0.00 32.21 4.00
159 160 0.037232 GGAAACGTCTCCTCCCACTG 60.037 60.000 0.00 0.00 32.21 3.66
160 161 0.966920 GAAACGTCTCCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
161 162 1.343465 GAAACGTCTCCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
162 163 1.420430 AACGTCTCCTCCCACTGAAA 58.580 50.000 0.00 0.00 0.00 2.69
163 164 0.680061 ACGTCTCCTCCCACTGAAAC 59.320 55.000 0.00 0.00 0.00 2.78
164 165 0.037232 CGTCTCCTCCCACTGAAACC 60.037 60.000 0.00 0.00 0.00 3.27
165 166 0.037232 GTCTCCTCCCACTGAAACCG 60.037 60.000 0.00 0.00 0.00 4.44
166 167 1.376037 CTCCTCCCACTGAAACCGC 60.376 63.158 0.00 0.00 0.00 5.68
167 168 2.111999 CTCCTCCCACTGAAACCGCA 62.112 60.000 0.00 0.00 0.00 5.69
168 169 1.002134 CCTCCCACTGAAACCGCAT 60.002 57.895 0.00 0.00 0.00 4.73
169 170 0.609131 CCTCCCACTGAAACCGCATT 60.609 55.000 0.00 0.00 0.00 3.56
170 171 0.523072 CTCCCACTGAAACCGCATTG 59.477 55.000 0.00 0.00 0.00 2.82
171 172 1.080569 CCCACTGAAACCGCATTGC 60.081 57.895 0.00 0.00 0.00 3.56
172 173 1.080569 CCACTGAAACCGCATTGCC 60.081 57.895 2.41 0.00 0.00 4.52
173 174 1.442520 CACTGAAACCGCATTGCCG 60.443 57.895 2.41 0.00 0.00 5.69
181 182 3.513225 CGCATTGCCGGAAATCCT 58.487 55.556 4.04 0.00 0.00 3.24
182 183 1.064621 CGCATTGCCGGAAATCCTG 59.935 57.895 4.04 0.00 0.00 3.86
183 184 1.375853 CGCATTGCCGGAAATCCTGA 61.376 55.000 4.04 0.00 0.00 3.86
184 185 0.817013 GCATTGCCGGAAATCCTGAA 59.183 50.000 4.04 0.00 0.00 3.02
185 186 1.204467 GCATTGCCGGAAATCCTGAAA 59.796 47.619 4.04 0.00 0.00 2.69
186 187 2.159057 GCATTGCCGGAAATCCTGAAAT 60.159 45.455 4.04 0.00 0.00 2.17
187 188 3.068024 GCATTGCCGGAAATCCTGAAATA 59.932 43.478 4.04 0.00 0.00 1.40
188 189 4.441356 GCATTGCCGGAAATCCTGAAATAA 60.441 41.667 4.04 0.00 0.00 1.40
189 190 5.659463 CATTGCCGGAAATCCTGAAATAAA 58.341 37.500 4.04 0.00 0.00 1.40
190 191 5.930837 TTGCCGGAAATCCTGAAATAAAT 57.069 34.783 5.05 0.00 0.00 1.40
191 192 5.514274 TGCCGGAAATCCTGAAATAAATC 57.486 39.130 5.05 0.00 0.00 2.17
192 193 4.340950 TGCCGGAAATCCTGAAATAAATCC 59.659 41.667 5.05 0.00 0.00 3.01
193 194 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
194 195 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
195 196 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
205 206 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
206 207 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
207 208 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
208 209 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
209 210 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
210 211 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
211 212 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
212 213 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
213 214 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
214 215 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
215 216 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
216 217 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
217 218 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
218 219 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
219 220 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
220 221 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
221 222 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
222 223 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
223 224 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
224 225 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
241 242 2.364972 CCTGATGGGTTGGGAATACC 57.635 55.000 0.00 0.00 40.81 2.73
249 250 4.259694 TGGGAATACCACTGCCCA 57.740 55.556 0.00 0.00 46.80 5.36
250 251 1.688811 TGGGAATACCACTGCCCAC 59.311 57.895 0.00 0.00 46.80 4.61
251 252 1.076995 GGGAATACCACTGCCCACC 60.077 63.158 0.00 0.00 40.39 4.61
252 253 1.571773 GGGAATACCACTGCCCACCT 61.572 60.000 0.00 0.00 40.39 4.00
253 254 1.209621 GGAATACCACTGCCCACCTA 58.790 55.000 0.00 0.00 35.97 3.08
254 255 1.562475 GGAATACCACTGCCCACCTAA 59.438 52.381 0.00 0.00 35.97 2.69
255 256 2.640184 GAATACCACTGCCCACCTAAC 58.360 52.381 0.00 0.00 0.00 2.34
256 257 0.916809 ATACCACTGCCCACCTAACC 59.083 55.000 0.00 0.00 0.00 2.85
257 258 0.474079 TACCACTGCCCACCTAACCA 60.474 55.000 0.00 0.00 0.00 3.67
258 259 1.140134 ACCACTGCCCACCTAACCAT 61.140 55.000 0.00 0.00 0.00 3.55
259 260 0.394352 CCACTGCCCACCTAACCATC 60.394 60.000 0.00 0.00 0.00 3.51
260 261 0.620556 CACTGCCCACCTAACCATCT 59.379 55.000 0.00 0.00 0.00 2.90
261 262 0.912486 ACTGCCCACCTAACCATCTC 59.088 55.000 0.00 0.00 0.00 2.75
262 263 0.911769 CTGCCCACCTAACCATCTCA 59.088 55.000 0.00 0.00 0.00 3.27
263 264 1.281867 CTGCCCACCTAACCATCTCAA 59.718 52.381 0.00 0.00 0.00 3.02
264 265 1.004277 TGCCCACCTAACCATCTCAAC 59.996 52.381 0.00 0.00 0.00 3.18
265 266 1.682087 GCCCACCTAACCATCTCAACC 60.682 57.143 0.00 0.00 0.00 3.77
266 267 1.633432 CCCACCTAACCATCTCAACCA 59.367 52.381 0.00 0.00 0.00 3.67
267 268 2.618045 CCCACCTAACCATCTCAACCAC 60.618 54.545 0.00 0.00 0.00 4.16
268 269 2.039746 CCACCTAACCATCTCAACCACA 59.960 50.000 0.00 0.00 0.00 4.17
269 270 3.338249 CACCTAACCATCTCAACCACAG 58.662 50.000 0.00 0.00 0.00 3.66
270 271 2.305927 ACCTAACCATCTCAACCACAGG 59.694 50.000 0.00 0.00 0.00 4.00
271 272 2.305927 CCTAACCATCTCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
281 282 3.353836 CCACAGGTTGGTTCGCCG 61.354 66.667 0.00 0.00 41.10 6.46
282 283 3.353836 CACAGGTTGGTTCGCCGG 61.354 66.667 0.00 0.00 41.18 6.13
283 284 3.868985 ACAGGTTGGTTCGCCGGT 61.869 61.111 1.90 0.00 41.18 5.28
284 285 2.344500 CAGGTTGGTTCGCCGGTA 59.656 61.111 1.90 0.00 41.18 4.02
285 286 2.030958 CAGGTTGGTTCGCCGGTAC 61.031 63.158 1.90 0.00 41.18 3.34
286 287 2.030862 GGTTGGTTCGCCGGTACA 59.969 61.111 1.90 0.00 41.18 2.90
287 288 2.030958 GGTTGGTTCGCCGGTACAG 61.031 63.158 1.90 0.00 41.18 2.74
288 289 1.301165 GTTGGTTCGCCGGTACAGT 60.301 57.895 1.90 0.00 41.18 3.55
289 290 0.038343 GTTGGTTCGCCGGTACAGTA 60.038 55.000 1.90 0.00 41.18 2.74
290 291 0.244450 TTGGTTCGCCGGTACAGTAG 59.756 55.000 1.90 0.00 41.18 2.57
291 292 1.517913 GGTTCGCCGGTACAGTAGC 60.518 63.158 1.90 0.00 0.00 3.58
292 293 1.213537 GTTCGCCGGTACAGTAGCA 59.786 57.895 1.90 0.00 0.00 3.49
293 294 0.179119 GTTCGCCGGTACAGTAGCAT 60.179 55.000 1.90 0.00 0.00 3.79
294 295 0.101759 TTCGCCGGTACAGTAGCATC 59.898 55.000 1.90 0.17 0.00 3.91
295 296 1.033202 TCGCCGGTACAGTAGCATCA 61.033 55.000 1.90 0.00 0.00 3.07
296 297 0.179121 CGCCGGTACAGTAGCATCAA 60.179 55.000 1.90 0.00 0.00 2.57
297 298 1.571919 GCCGGTACAGTAGCATCAAG 58.428 55.000 1.90 0.00 0.00 3.02
298 299 1.806623 GCCGGTACAGTAGCATCAAGG 60.807 57.143 1.90 3.80 0.00 3.61
299 300 1.202533 CCGGTACAGTAGCATCAAGGG 60.203 57.143 10.37 0.00 0.00 3.95
300 301 1.480954 CGGTACAGTAGCATCAAGGGT 59.519 52.381 10.37 0.00 0.00 4.34
301 302 2.738643 CGGTACAGTAGCATCAAGGGTG 60.739 54.545 10.37 0.00 0.00 4.61
302 303 2.280628 GTACAGTAGCATCAAGGGTGC 58.719 52.381 0.00 0.00 42.81 5.01
303 304 0.391661 ACAGTAGCATCAAGGGTGCG 60.392 55.000 0.00 0.00 46.86 5.34
304 305 0.391661 CAGTAGCATCAAGGGTGCGT 60.392 55.000 0.00 0.00 46.86 5.24
305 306 0.391661 AGTAGCATCAAGGGTGCGTG 60.392 55.000 0.00 0.00 46.86 5.34
306 307 0.673644 GTAGCATCAAGGGTGCGTGT 60.674 55.000 0.00 0.00 46.86 4.49
307 308 0.036164 TAGCATCAAGGGTGCGTGTT 59.964 50.000 0.00 0.00 46.86 3.32
308 309 1.081242 GCATCAAGGGTGCGTGTTG 60.081 57.895 0.00 0.00 32.29 3.33
309 310 1.081242 CATCAAGGGTGCGTGTTGC 60.081 57.895 0.00 0.00 46.70 4.17
318 319 3.337889 GCGTGTTGCAGACGAGCA 61.338 61.111 20.80 0.00 45.45 4.26
319 320 2.849007 CGTGTTGCAGACGAGCAG 59.151 61.111 13.51 0.00 46.54 4.24
320 321 1.951130 CGTGTTGCAGACGAGCAGT 60.951 57.895 13.51 0.00 46.54 4.40
333 334 4.244425 ACGAGCAGTCATGTATCCATAC 57.756 45.455 0.00 0.00 0.00 2.39
334 335 3.237628 CGAGCAGTCATGTATCCATACG 58.762 50.000 0.00 0.00 36.06 3.06
335 336 3.579709 GAGCAGTCATGTATCCATACGG 58.420 50.000 0.00 0.00 36.06 4.02
336 337 2.069273 GCAGTCATGTATCCATACGGC 58.931 52.381 0.00 0.00 36.06 5.68
337 338 2.688507 CAGTCATGTATCCATACGGCC 58.311 52.381 0.00 0.00 36.06 6.13
338 339 2.300152 CAGTCATGTATCCATACGGCCT 59.700 50.000 0.00 0.00 36.06 5.19
339 340 3.509967 CAGTCATGTATCCATACGGCCTA 59.490 47.826 0.00 0.00 36.06 3.93
340 341 3.510360 AGTCATGTATCCATACGGCCTAC 59.490 47.826 0.00 0.00 36.06 3.18
341 342 2.829720 TCATGTATCCATACGGCCTACC 59.170 50.000 0.00 0.00 36.06 3.18
354 355 2.817901 GGCCTACCGTGTACAAGTATG 58.182 52.381 8.02 6.63 0.00 2.39
355 356 2.199236 GCCTACCGTGTACAAGTATGC 58.801 52.381 14.52 14.52 0.00 3.14
356 357 2.456989 CCTACCGTGTACAAGTATGCG 58.543 52.381 8.02 1.36 0.00 4.73
357 358 1.850441 CTACCGTGTACAAGTATGCGC 59.150 52.381 0.00 0.00 0.00 6.09
358 359 0.038067 ACCGTGTACAAGTATGCGCA 60.038 50.000 14.96 14.96 0.00 6.09
359 360 0.368907 CCGTGTACAAGTATGCGCAC 59.631 55.000 14.90 0.00 33.69 5.34
360 361 0.023229 CGTGTACAAGTATGCGCACG 59.977 55.000 14.90 3.26 44.91 5.34
361 362 0.368907 GTGTACAAGTATGCGCACGG 59.631 55.000 14.90 2.76 0.00 4.94
362 363 1.347221 GTACAAGTATGCGCACGGC 59.653 57.895 14.90 5.81 43.96 5.68
373 374 2.851104 GCACGGCGTGAACAGTAC 59.149 61.111 40.94 19.10 35.23 2.73
374 375 1.952133 GCACGGCGTGAACAGTACA 60.952 57.895 40.94 0.00 35.23 2.90
375 376 1.492319 GCACGGCGTGAACAGTACAA 61.492 55.000 40.94 0.00 35.23 2.41
376 377 0.931702 CACGGCGTGAACAGTACAAA 59.068 50.000 34.85 0.00 35.23 2.83
377 378 1.070843 CACGGCGTGAACAGTACAAAG 60.071 52.381 34.85 2.00 35.23 2.77
378 379 0.110823 CGGCGTGAACAGTACAAAGC 60.111 55.000 0.00 0.00 0.00 3.51
379 380 0.941542 GGCGTGAACAGTACAAAGCA 59.058 50.000 0.00 0.00 0.00 3.91
380 381 1.069906 GGCGTGAACAGTACAAAGCAG 60.070 52.381 0.00 0.00 0.00 4.24
381 382 1.864711 GCGTGAACAGTACAAAGCAGA 59.135 47.619 0.00 0.00 0.00 4.26
382 383 2.286833 GCGTGAACAGTACAAAGCAGAA 59.713 45.455 0.00 0.00 0.00 3.02
383 384 3.058914 GCGTGAACAGTACAAAGCAGAAT 60.059 43.478 0.00 0.00 0.00 2.40
384 385 4.151689 GCGTGAACAGTACAAAGCAGAATA 59.848 41.667 0.00 0.00 0.00 1.75
385 386 5.668866 GCGTGAACAGTACAAAGCAGAATAG 60.669 44.000 0.00 0.00 0.00 1.73
386 387 5.405571 CGTGAACAGTACAAAGCAGAATAGT 59.594 40.000 0.00 0.00 0.00 2.12
387 388 6.400091 CGTGAACAGTACAAAGCAGAATAGTC 60.400 42.308 0.00 0.00 0.00 2.59
388 389 5.633601 TGAACAGTACAAAGCAGAATAGTCG 59.366 40.000 0.00 0.00 0.00 4.18
389 390 5.135508 ACAGTACAAAGCAGAATAGTCGT 57.864 39.130 0.00 0.00 0.00 4.34
390 391 5.162075 ACAGTACAAAGCAGAATAGTCGTC 58.838 41.667 0.00 0.00 0.00 4.20
391 392 4.563184 CAGTACAAAGCAGAATAGTCGTCC 59.437 45.833 0.00 0.00 0.00 4.79
392 393 3.678056 ACAAAGCAGAATAGTCGTCCA 57.322 42.857 0.00 0.00 0.00 4.02
393 394 4.207891 ACAAAGCAGAATAGTCGTCCAT 57.792 40.909 0.00 0.00 0.00 3.41
394 395 4.184629 ACAAAGCAGAATAGTCGTCCATC 58.815 43.478 0.00 0.00 0.00 3.51
395 396 2.783828 AGCAGAATAGTCGTCCATCG 57.216 50.000 0.00 0.00 41.41 3.84
396 397 2.025155 AGCAGAATAGTCGTCCATCGT 58.975 47.619 0.00 0.00 40.80 3.73
397 398 2.120232 GCAGAATAGTCGTCCATCGTG 58.880 52.381 0.00 0.00 40.80 4.35
398 399 2.223502 GCAGAATAGTCGTCCATCGTGA 60.224 50.000 0.00 0.00 40.80 4.35
399 400 3.364062 CAGAATAGTCGTCCATCGTGAC 58.636 50.000 0.00 0.00 40.80 3.67
405 406 3.248171 GTCCATCGTGACGCGCTC 61.248 66.667 5.73 3.58 41.07 5.03
406 407 3.440415 TCCATCGTGACGCGCTCT 61.440 61.111 5.73 0.00 41.07 4.09
407 408 2.110352 TCCATCGTGACGCGCTCTA 61.110 57.895 5.73 0.00 41.07 2.43
408 409 1.008424 CCATCGTGACGCGCTCTAT 60.008 57.895 5.73 0.00 41.07 1.98
409 410 1.271446 CCATCGTGACGCGCTCTATG 61.271 60.000 5.73 7.91 41.07 2.23
410 411 1.658717 ATCGTGACGCGCTCTATGC 60.659 57.895 5.73 0.00 41.07 3.14
411 412 3.323136 CGTGACGCGCTCTATGCC 61.323 66.667 5.73 0.00 38.78 4.40
412 413 2.962253 GTGACGCGCTCTATGCCC 60.962 66.667 5.73 0.00 38.78 5.36
416 417 2.429236 CGCGCTCTATGCCCGTAG 60.429 66.667 5.56 0.00 38.08 3.51
417 418 2.904676 CGCGCTCTATGCCCGTAGA 61.905 63.158 5.56 0.00 38.08 2.59
418 419 1.371881 GCGCTCTATGCCCGTAGAC 60.372 63.158 0.00 0.00 38.78 2.59
419 420 1.797211 GCGCTCTATGCCCGTAGACT 61.797 60.000 0.00 0.00 38.78 3.24
420 421 0.669077 CGCTCTATGCCCGTAGACTT 59.331 55.000 0.00 0.00 38.78 3.01
421 422 1.600663 CGCTCTATGCCCGTAGACTTG 60.601 57.143 0.00 0.00 38.78 3.16
422 423 1.409427 GCTCTATGCCCGTAGACTTGT 59.591 52.381 0.00 0.00 35.15 3.16
423 424 2.621998 GCTCTATGCCCGTAGACTTGTA 59.378 50.000 0.00 0.00 35.15 2.41
424 425 3.256136 GCTCTATGCCCGTAGACTTGTAT 59.744 47.826 0.00 0.00 35.15 2.29
425 426 4.799678 CTCTATGCCCGTAGACTTGTATG 58.200 47.826 0.00 0.00 0.00 2.39
426 427 4.212716 TCTATGCCCGTAGACTTGTATGT 58.787 43.478 0.00 0.00 0.00 2.29
427 428 5.379187 TCTATGCCCGTAGACTTGTATGTA 58.621 41.667 0.00 0.00 0.00 2.29
428 429 3.788333 TGCCCGTAGACTTGTATGTAC 57.212 47.619 0.00 0.00 0.00 2.90
429 430 3.090790 TGCCCGTAGACTTGTATGTACA 58.909 45.455 0.00 0.00 0.00 2.90
430 431 3.129813 TGCCCGTAGACTTGTATGTACAG 59.870 47.826 0.33 0.00 37.52 2.74
431 432 3.703420 CCCGTAGACTTGTATGTACAGC 58.297 50.000 0.33 0.00 37.52 4.40
432 433 3.129813 CCCGTAGACTTGTATGTACAGCA 59.870 47.826 0.33 0.00 37.52 4.41
433 434 4.202121 CCCGTAGACTTGTATGTACAGCAT 60.202 45.833 0.33 0.00 41.42 3.79
434 435 5.348986 CCGTAGACTTGTATGTACAGCATT 58.651 41.667 0.33 0.00 38.94 3.56
435 436 5.810587 CCGTAGACTTGTATGTACAGCATTT 59.189 40.000 0.33 0.00 38.94 2.32
436 437 6.237835 CCGTAGACTTGTATGTACAGCATTTG 60.238 42.308 0.33 0.48 38.94 2.32
437 438 6.310467 CGTAGACTTGTATGTACAGCATTTGT 59.690 38.462 0.33 3.37 43.96 2.83
438 439 7.486870 CGTAGACTTGTATGTACAGCATTTGTA 59.513 37.037 0.33 0.00 41.29 2.41
439 440 7.834068 AGACTTGTATGTACAGCATTTGTAG 57.166 36.000 0.33 0.26 42.75 2.74
440 441 7.611770 AGACTTGTATGTACAGCATTTGTAGA 58.388 34.615 0.33 0.00 42.75 2.59
441 442 8.260818 AGACTTGTATGTACAGCATTTGTAGAT 58.739 33.333 0.33 3.06 45.31 1.98
442 443 8.201554 ACTTGTATGTACAGCATTTGTAGATG 57.798 34.615 0.33 0.00 43.74 2.90
443 444 7.824289 ACTTGTATGTACAGCATTTGTAGATGT 59.176 33.333 0.33 0.00 43.74 3.06
444 445 7.770801 TGTATGTACAGCATTTGTAGATGTC 57.229 36.000 0.33 2.65 43.74 3.06
445 446 5.973651 ATGTACAGCATTTGTAGATGTCG 57.026 39.130 0.33 0.00 42.73 4.35
446 447 3.616821 TGTACAGCATTTGTAGATGTCGC 59.383 43.478 0.00 0.00 42.75 5.19
447 448 2.698803 ACAGCATTTGTAGATGTCGCA 58.301 42.857 0.00 0.00 38.56 5.10
448 449 2.416547 ACAGCATTTGTAGATGTCGCAC 59.583 45.455 0.00 0.00 38.56 5.34
449 450 1.660607 AGCATTTGTAGATGTCGCACG 59.339 47.619 0.00 0.00 0.00 5.34
450 451 1.658596 GCATTTGTAGATGTCGCACGA 59.341 47.619 0.00 0.00 0.00 4.35
451 452 2.285220 GCATTTGTAGATGTCGCACGAT 59.715 45.455 0.00 0.00 0.00 3.73
452 453 3.489416 GCATTTGTAGATGTCGCACGATA 59.511 43.478 0.00 0.00 0.00 2.92
453 454 4.150627 GCATTTGTAGATGTCGCACGATAT 59.849 41.667 1.72 1.72 0.00 1.63
454 455 5.344933 GCATTTGTAGATGTCGCACGATATA 59.655 40.000 2.14 0.00 0.00 0.86
455 456 6.035005 GCATTTGTAGATGTCGCACGATATAT 59.965 38.462 2.14 2.40 0.00 0.86
456 457 6.927933 TTTGTAGATGTCGCACGATATATG 57.072 37.500 7.10 0.00 0.00 1.78
457 458 4.412207 TGTAGATGTCGCACGATATATGC 58.588 43.478 7.10 6.40 39.81 3.14
458 459 3.575965 AGATGTCGCACGATATATGCA 57.424 42.857 11.04 0.00 43.57 3.96
459 460 3.913089 AGATGTCGCACGATATATGCAA 58.087 40.909 11.04 0.00 43.57 4.08
460 461 4.498241 AGATGTCGCACGATATATGCAAT 58.502 39.130 11.04 2.85 43.57 3.56
461 462 4.328169 AGATGTCGCACGATATATGCAATG 59.672 41.667 11.04 0.00 43.57 2.82
462 463 2.157474 TGTCGCACGATATATGCAATGC 59.843 45.455 0.00 0.00 43.57 3.56
463 464 2.157474 GTCGCACGATATATGCAATGCA 59.843 45.455 11.44 11.44 43.57 3.96
481 482 4.610714 TGGTACAACGCAGGCGCA 62.611 61.111 14.32 0.00 44.19 6.09
482 483 4.084888 GGTACAACGCAGGCGCAC 62.085 66.667 14.32 6.67 44.19 5.34
483 484 3.041940 GTACAACGCAGGCGCACT 61.042 61.111 14.32 0.02 44.19 4.40
484 485 2.736995 TACAACGCAGGCGCACTC 60.737 61.111 14.32 0.00 44.19 3.51
493 494 4.796231 GGCGCACTCGTCCGTCAT 62.796 66.667 10.83 0.00 38.14 3.06
494 495 2.101575 GCGCACTCGTCCGTCATA 59.898 61.111 0.30 0.00 38.14 2.15
495 496 1.299165 GCGCACTCGTCCGTCATAT 60.299 57.895 0.30 0.00 38.14 1.78
496 497 1.269444 GCGCACTCGTCCGTCATATC 61.269 60.000 0.30 0.00 38.14 1.63
497 498 0.992263 CGCACTCGTCCGTCATATCG 60.992 60.000 0.00 0.00 0.00 2.92
505 506 3.030209 CCGTCATATCGGGCATACG 57.970 57.895 0.00 0.00 45.88 3.06
506 507 0.242825 CCGTCATATCGGGCATACGT 59.757 55.000 0.00 0.00 45.88 3.57
507 508 1.469703 CCGTCATATCGGGCATACGTA 59.530 52.381 0.00 0.00 45.88 3.57
508 509 2.512885 CGTCATATCGGGCATACGTAC 58.487 52.381 0.00 0.00 34.94 3.67
509 510 2.095617 CGTCATATCGGGCATACGTACA 60.096 50.000 0.00 0.00 34.94 2.90
510 511 3.240069 GTCATATCGGGCATACGTACAC 58.760 50.000 0.00 0.00 34.94 2.90
511 512 2.095617 TCATATCGGGCATACGTACACG 60.096 50.000 0.00 0.00 46.33 4.49
512 513 0.040157 TATCGGGCATACGTACACGC 60.040 55.000 0.00 0.68 44.43 5.34
513 514 2.994143 ATCGGGCATACGTACACGCG 62.994 60.000 22.37 22.37 44.43 6.01
514 515 2.102749 GGGCATACGTACACGCGA 59.897 61.111 15.93 0.00 44.43 5.87
515 516 1.942712 GGGCATACGTACACGCGAG 60.943 63.158 15.93 7.88 44.43 5.03
516 517 1.942712 GGCATACGTACACGCGAGG 60.943 63.158 15.93 7.12 44.43 4.63
517 518 1.942712 GCATACGTACACGCGAGGG 60.943 63.158 15.93 4.07 44.43 4.30
518 519 1.298863 CATACGTACACGCGAGGGG 60.299 63.158 15.93 0.51 44.43 4.79
519 520 1.750399 ATACGTACACGCGAGGGGT 60.750 57.895 15.93 7.39 44.43 4.95
520 521 0.463654 ATACGTACACGCGAGGGGTA 60.464 55.000 15.93 9.55 44.43 3.69
521 522 0.463654 TACGTACACGCGAGGGGTAT 60.464 55.000 15.93 0.00 44.43 2.73
522 523 1.298863 CGTACACGCGAGGGGTATG 60.299 63.158 15.93 11.05 40.46 2.39
523 524 1.717791 CGTACACGCGAGGGGTATGA 61.718 60.000 15.93 0.00 40.46 2.15
524 525 0.672342 GTACACGCGAGGGGTATGAT 59.328 55.000 15.93 0.00 40.46 2.45
525 526 0.671796 TACACGCGAGGGGTATGATG 59.328 55.000 15.93 0.00 40.46 3.07
526 527 1.956170 CACGCGAGGGGTATGATGC 60.956 63.158 15.93 0.00 0.00 3.91
527 528 2.734723 CGCGAGGGGTATGATGCG 60.735 66.667 0.00 0.00 39.57 4.73
528 529 3.044305 GCGAGGGGTATGATGCGC 61.044 66.667 0.00 0.00 37.60 6.09
529 530 2.357517 CGAGGGGTATGATGCGCC 60.358 66.667 4.18 8.55 38.99 6.53
531 532 3.151906 AGGGGTATGATGCGCCTC 58.848 61.111 13.18 5.02 44.55 4.70
532 533 2.357517 GGGGTATGATGCGCCTCG 60.358 66.667 4.18 0.00 36.22 4.63
533 534 2.421739 GGGTATGATGCGCCTCGT 59.578 61.111 12.17 12.17 0.00 4.18
534 535 1.956170 GGGTATGATGCGCCTCGTG 60.956 63.158 16.53 0.00 0.00 4.35
535 536 1.067416 GGTATGATGCGCCTCGTGA 59.933 57.895 16.53 0.00 0.00 4.35
536 537 0.319900 GGTATGATGCGCCTCGTGAT 60.320 55.000 16.53 3.78 0.00 3.06
537 538 1.502231 GTATGATGCGCCTCGTGATT 58.498 50.000 16.53 0.00 0.00 2.57
538 539 1.457303 GTATGATGCGCCTCGTGATTC 59.543 52.381 16.53 2.56 0.00 2.52
539 540 0.179076 ATGATGCGCCTCGTGATTCA 60.179 50.000 4.18 0.00 0.00 2.57
540 541 1.083806 TGATGCGCCTCGTGATTCAC 61.084 55.000 4.18 6.73 0.00 3.18
556 557 2.776072 ACGATACGTGCTTTGCGC 59.224 55.556 0.00 0.00 39.18 6.09
557 558 1.736645 ACGATACGTGCTTTGCGCT 60.737 52.632 9.73 0.00 39.18 5.92
558 559 1.013323 CGATACGTGCTTTGCGCTC 60.013 57.895 9.73 0.00 40.11 5.03
562 563 4.783841 CGTGCTTTGCGCTCGCTC 62.784 66.667 9.73 8.42 46.61 5.03
563 564 4.783841 GTGCTTTGCGCTCGCTCG 62.784 66.667 9.73 4.98 42.51 5.03
572 573 4.264638 GCTCGCTCGCTCCCTCTC 62.265 72.222 0.00 0.00 0.00 3.20
573 574 3.591835 CTCGCTCGCTCCCTCTCC 61.592 72.222 0.00 0.00 0.00 3.71
576 577 3.223589 GCTCGCTCCCTCTCCCTC 61.224 72.222 0.00 0.00 0.00 4.30
577 578 2.904866 CTCGCTCCCTCTCCCTCG 60.905 72.222 0.00 0.00 0.00 4.63
581 582 3.213402 CTCCCTCTCCCTCGCGTC 61.213 72.222 5.77 0.00 0.00 5.19
600 601 3.249999 GCGAGTGCCTGCGTTAAA 58.750 55.556 0.00 0.00 33.98 1.52
601 602 1.794222 GCGAGTGCCTGCGTTAAAT 59.206 52.632 0.00 0.00 33.98 1.40
602 603 0.168128 GCGAGTGCCTGCGTTAAATT 59.832 50.000 0.00 0.00 33.98 1.82
603 604 1.401018 GCGAGTGCCTGCGTTAAATTT 60.401 47.619 0.00 0.00 33.98 1.82
604 605 2.920647 GCGAGTGCCTGCGTTAAATTTT 60.921 45.455 0.00 0.00 33.98 1.82
605 606 3.668491 GCGAGTGCCTGCGTTAAATTTTA 60.668 43.478 0.00 0.00 33.98 1.52
606 607 4.468643 CGAGTGCCTGCGTTAAATTTTAA 58.531 39.130 0.00 0.00 0.00 1.52
607 608 4.319901 CGAGTGCCTGCGTTAAATTTTAAC 59.680 41.667 18.11 18.11 0.00 2.01
608 609 4.552355 AGTGCCTGCGTTAAATTTTAACC 58.448 39.130 20.80 15.45 0.00 2.85
609 610 4.038162 AGTGCCTGCGTTAAATTTTAACCA 59.962 37.500 20.80 18.07 0.00 3.67
610 611 4.745620 GTGCCTGCGTTAAATTTTAACCAA 59.254 37.500 20.80 11.60 0.00 3.67
611 612 4.985409 TGCCTGCGTTAAATTTTAACCAAG 59.015 37.500 20.80 17.79 0.00 3.61
612 613 4.143200 GCCTGCGTTAAATTTTAACCAAGC 60.143 41.667 20.80 19.22 0.00 4.01
613 614 4.089351 CCTGCGTTAAATTTTAACCAAGCG 59.911 41.667 20.80 12.87 0.00 4.68
614 615 3.425858 TGCGTTAAATTTTAACCAAGCGC 59.574 39.130 20.80 19.81 41.22 5.92
615 616 3.479072 GCGTTAAATTTTAACCAAGCGCG 60.479 43.478 20.80 0.00 32.27 6.86
616 617 3.907194 CGTTAAATTTTAACCAAGCGCGA 59.093 39.130 20.80 0.00 0.00 5.87
617 618 4.028648 CGTTAAATTTTAACCAAGCGCGAG 59.971 41.667 20.80 0.00 0.00 5.03
697 698 5.403246 GTTGGATCTCATATAGATTCGCGT 58.597 41.667 5.77 0.00 45.35 6.01
780 781 2.158871 TCGTATATGCCAGTGGGTTTCC 60.159 50.000 12.15 0.00 36.17 3.13
1433 1471 6.122277 TCAAATTTTCTCTCTGAGGTGTTGT 58.878 36.000 4.59 0.00 0.00 3.32
1853 1894 6.552008 AGATCTCTGTAGCTAGCCTAATTCT 58.448 40.000 12.13 1.35 0.00 2.40
2609 2922 7.230849 TCAGCATTTAATGTCTTGAATTGGT 57.769 32.000 6.81 0.00 0.00 3.67
2673 2986 2.499693 TGTGCTACAAATCCTCATCCGA 59.500 45.455 0.00 0.00 0.00 4.55
2674 2987 3.126831 GTGCTACAAATCCTCATCCGAG 58.873 50.000 0.00 0.00 39.16 4.63
2675 2988 2.139118 GCTACAAATCCTCATCCGAGC 58.861 52.381 0.00 0.00 38.00 5.03
2676 2989 2.398498 CTACAAATCCTCATCCGAGCG 58.602 52.381 0.00 0.00 38.00 5.03
2677 2990 0.179073 ACAAATCCTCATCCGAGCGG 60.179 55.000 1.74 1.74 38.00 5.52
2678 2991 0.179073 CAAATCCTCATCCGAGCGGT 60.179 55.000 8.96 0.00 38.00 5.68
2679 2992 1.068588 CAAATCCTCATCCGAGCGGTA 59.931 52.381 8.96 0.00 38.00 4.02
2680 2993 1.633774 AATCCTCATCCGAGCGGTAT 58.366 50.000 8.96 0.00 38.00 2.73
2681 2994 2.509166 ATCCTCATCCGAGCGGTATA 57.491 50.000 8.96 0.00 38.00 1.47
2682 2995 1.531423 TCCTCATCCGAGCGGTATAC 58.469 55.000 8.96 0.00 38.00 1.47
2683 2996 1.073444 TCCTCATCCGAGCGGTATACT 59.927 52.381 8.96 0.00 38.00 2.12
2684 2997 1.200252 CCTCATCCGAGCGGTATACTG 59.800 57.143 7.38 7.38 38.00 2.74
2685 2998 1.880675 CTCATCCGAGCGGTATACTGT 59.119 52.381 13.23 0.43 36.47 3.55
2686 2999 2.293677 CTCATCCGAGCGGTATACTGTT 59.706 50.000 13.23 7.18 36.47 3.16
2687 3000 3.479489 TCATCCGAGCGGTATACTGTTA 58.521 45.455 13.23 0.00 36.47 2.41
2688 3001 3.501062 TCATCCGAGCGGTATACTGTTAG 59.499 47.826 13.23 7.53 36.47 2.34
2689 3002 2.224606 TCCGAGCGGTATACTGTTAGG 58.775 52.381 17.95 17.95 36.47 2.69
2690 3003 1.335689 CCGAGCGGTATACTGTTAGGC 60.336 57.143 13.35 3.88 0.00 3.93
2691 3004 1.607628 CGAGCGGTATACTGTTAGGCT 59.392 52.381 13.23 7.48 0.00 4.58
2692 3005 2.810274 CGAGCGGTATACTGTTAGGCTA 59.190 50.000 13.23 0.00 0.00 3.93
2693 3006 3.120269 CGAGCGGTATACTGTTAGGCTAG 60.120 52.174 13.23 4.95 0.00 3.42
2694 3007 3.819902 GAGCGGTATACTGTTAGGCTAGT 59.180 47.826 13.23 0.00 0.00 2.57
2695 3008 3.819902 AGCGGTATACTGTTAGGCTAGTC 59.180 47.826 13.23 0.00 0.00 2.59
2696 3009 3.567164 GCGGTATACTGTTAGGCTAGTCA 59.433 47.826 13.23 0.00 0.00 3.41
2697 3010 4.217983 GCGGTATACTGTTAGGCTAGTCAT 59.782 45.833 13.23 0.00 0.00 3.06
2698 3011 5.413833 GCGGTATACTGTTAGGCTAGTCATA 59.586 44.000 13.23 0.00 0.00 2.15
2699 3012 6.403418 GCGGTATACTGTTAGGCTAGTCATAG 60.403 46.154 13.23 0.00 0.00 2.23
2700 3013 6.654161 CGGTATACTGTTAGGCTAGTCATAGT 59.346 42.308 3.31 0.00 0.00 2.12
2701 3014 7.821359 CGGTATACTGTTAGGCTAGTCATAGTA 59.179 40.741 3.31 4.46 0.00 1.82
2702 3015 9.165035 GGTATACTGTTAGGCTAGTCATAGTAG 57.835 40.741 2.25 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
6 7 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
7 8 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
8 9 3.305110 TGAGTGTATGCGCGTGTATATG 58.695 45.455 13.61 0.00 0.00 1.78
9 10 3.636282 TGAGTGTATGCGCGTGTATAT 57.364 42.857 13.61 0.00 0.00 0.86
10 11 3.561503 GATGAGTGTATGCGCGTGTATA 58.438 45.455 13.61 2.40 0.00 1.47
11 12 2.394708 GATGAGTGTATGCGCGTGTAT 58.605 47.619 13.61 4.63 0.00 2.29
12 13 1.535226 GGATGAGTGTATGCGCGTGTA 60.535 52.381 13.61 0.00 0.00 2.90
13 14 0.806102 GGATGAGTGTATGCGCGTGT 60.806 55.000 13.61 0.00 0.00 4.49
14 15 1.490693 GGGATGAGTGTATGCGCGTG 61.491 60.000 13.61 0.00 0.00 5.34
15 16 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
16 17 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
17 18 2.029020 TCATAGGGATGAGTGTATGCGC 60.029 50.000 0.00 0.00 37.15 6.09
18 19 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
19 20 3.990469 CGTTCATAGGGATGAGTGTATGC 59.010 47.826 0.00 0.00 43.03 3.14
20 21 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
21 22 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
22 23 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
23 24 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
24 25 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
25 26 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
26 27 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
27 28 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
28 29 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
29 30 1.739035 CGTGTGTGCGTTCATAGGGAT 60.739 52.381 0.00 0.00 0.00 3.85
30 31 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
31 32 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
32 33 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
33 34 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
34 35 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
35 36 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
36 37 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
37 38 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
38 39 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
41 42 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
42 43 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
43 44 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
44 45 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
45 46 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
46 47 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
47 48 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
48 49 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
49 50 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
50 51 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
51 52 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
52 53 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
53 54 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
54 55 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
55 56 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
56 57 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
57 58 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
58 59 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
59 60 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
60 61 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
61 62 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
62 63 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
63 64 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
64 65 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
65 66 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
66 67 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
67 68 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
68 69 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
69 70 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
70 71 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
71 72 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
72 73 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
73 74 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
74 75 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
75 76 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
76 77 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
77 78 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
78 79 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
79 80 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
80 81 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
81 82 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
82 83 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
83 84 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
84 85 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
85 86 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
86 87 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
87 88 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
88 89 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
89 90 7.623089 GCTTCGTAAATCTCAAGATGATATGCC 60.623 40.741 0.00 0.00 34.49 4.40
90 91 7.232994 GCTTCGTAAATCTCAAGATGATATGC 58.767 38.462 0.00 0.00 34.49 3.14
91 92 7.386025 TGGCTTCGTAAATCTCAAGATGATATG 59.614 37.037 0.00 0.00 34.49 1.78
92 93 7.386299 GTGGCTTCGTAAATCTCAAGATGATAT 59.614 37.037 0.00 0.00 34.49 1.63
93 94 6.701841 GTGGCTTCGTAAATCTCAAGATGATA 59.298 38.462 0.00 0.00 34.49 2.15
94 95 5.525378 GTGGCTTCGTAAATCTCAAGATGAT 59.475 40.000 0.00 0.00 34.49 2.45
95 96 4.870426 GTGGCTTCGTAAATCTCAAGATGA 59.130 41.667 0.00 0.00 34.49 2.92
96 97 4.034510 GGTGGCTTCGTAAATCTCAAGATG 59.965 45.833 0.00 0.00 34.49 2.90
97 98 4.192317 GGTGGCTTCGTAAATCTCAAGAT 58.808 43.478 0.00 0.00 36.07 2.40
98 99 3.596214 GGTGGCTTCGTAAATCTCAAGA 58.404 45.455 0.00 0.00 0.00 3.02
99 100 2.348666 CGGTGGCTTCGTAAATCTCAAG 59.651 50.000 0.00 0.00 0.00 3.02
100 101 2.289195 ACGGTGGCTTCGTAAATCTCAA 60.289 45.455 4.10 0.00 39.22 3.02
101 102 1.274167 ACGGTGGCTTCGTAAATCTCA 59.726 47.619 4.10 0.00 39.22 3.27
102 103 2.005971 ACGGTGGCTTCGTAAATCTC 57.994 50.000 4.10 0.00 39.22 2.75
103 104 2.737679 GCTACGGTGGCTTCGTAAATCT 60.738 50.000 9.42 0.00 41.62 2.40
104 105 1.591619 GCTACGGTGGCTTCGTAAATC 59.408 52.381 9.42 3.96 41.62 2.17
105 106 1.648504 GCTACGGTGGCTTCGTAAAT 58.351 50.000 9.42 0.00 41.62 1.40
106 107 0.390209 GGCTACGGTGGCTTCGTAAA 60.390 55.000 16.20 0.00 41.62 2.01
107 108 1.216178 GGCTACGGTGGCTTCGTAA 59.784 57.895 16.20 0.76 41.62 3.18
108 109 2.887360 GGCTACGGTGGCTTCGTA 59.113 61.111 16.20 11.10 41.38 3.43
109 110 4.430765 CGGCTACGGTGGCTTCGT 62.431 66.667 16.20 10.10 43.64 3.85
116 117 4.849329 GACGAGGCGGCTACGGTG 62.849 72.222 25.66 12.41 41.36 4.94
119 120 4.883300 GACGACGAGGCGGCTACG 62.883 72.222 23.15 23.15 44.63 3.51
139 140 1.080025 GTGGGAGGAGACGTTTCCG 60.080 63.158 18.59 0.00 42.29 4.30
140 141 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.000 17.16 17.16 37.52 3.13
141 142 0.966920 TCAGTGGGAGGAGACGTTTC 59.033 55.000 0.00 0.00 0.00 2.78
142 143 1.420430 TTCAGTGGGAGGAGACGTTT 58.580 50.000 0.00 0.00 0.00 3.60
143 144 1.070289 GTTTCAGTGGGAGGAGACGTT 59.930 52.381 0.00 0.00 0.00 3.99
144 145 0.680061 GTTTCAGTGGGAGGAGACGT 59.320 55.000 0.00 0.00 0.00 4.34
145 146 0.037232 GGTTTCAGTGGGAGGAGACG 60.037 60.000 0.00 0.00 0.00 4.18
146 147 0.037232 CGGTTTCAGTGGGAGGAGAC 60.037 60.000 0.00 0.00 0.00 3.36
147 148 1.827399 GCGGTTTCAGTGGGAGGAGA 61.827 60.000 0.00 0.00 0.00 3.71
148 149 1.376037 GCGGTTTCAGTGGGAGGAG 60.376 63.158 0.00 0.00 0.00 3.69
149 150 1.488705 ATGCGGTTTCAGTGGGAGGA 61.489 55.000 0.00 0.00 0.00 3.71
150 151 0.609131 AATGCGGTTTCAGTGGGAGG 60.609 55.000 0.00 0.00 0.00 4.30
151 152 0.523072 CAATGCGGTTTCAGTGGGAG 59.477 55.000 0.00 0.00 0.00 4.30
152 153 1.523154 GCAATGCGGTTTCAGTGGGA 61.523 55.000 0.00 0.00 33.17 4.37
153 154 1.080569 GCAATGCGGTTTCAGTGGG 60.081 57.895 0.00 0.00 33.17 4.61
154 155 1.080569 GGCAATGCGGTTTCAGTGG 60.081 57.895 0.00 0.00 33.17 4.00
155 156 1.442520 CGGCAATGCGGTTTCAGTG 60.443 57.895 4.53 0.00 35.39 3.66
156 157 2.625823 CCGGCAATGCGGTTTCAGT 61.626 57.895 11.74 0.00 0.00 3.41
157 158 1.861542 TTCCGGCAATGCGGTTTCAG 61.862 55.000 11.74 0.00 0.00 3.02
158 159 1.456196 TTTCCGGCAATGCGGTTTCA 61.456 50.000 11.74 0.00 0.00 2.69
159 160 0.108851 ATTTCCGGCAATGCGGTTTC 60.109 50.000 11.74 0.00 0.00 2.78
160 161 0.108851 GATTTCCGGCAATGCGGTTT 60.109 50.000 3.34 1.23 0.00 3.27
161 162 1.510844 GATTTCCGGCAATGCGGTT 59.489 52.632 3.34 1.54 0.00 4.44
162 163 2.414785 GGATTTCCGGCAATGCGGT 61.415 57.895 3.34 0.00 0.00 5.68
163 164 2.120909 AGGATTTCCGGCAATGCGG 61.121 57.895 12.24 5.77 42.08 5.69
164 165 1.064621 CAGGATTTCCGGCAATGCG 59.935 57.895 12.24 4.57 42.08 4.73
165 166 0.817013 TTCAGGATTTCCGGCAATGC 59.183 50.000 10.26 10.26 42.08 3.56
166 167 3.806625 ATTTCAGGATTTCCGGCAATG 57.193 42.857 3.34 0.00 42.08 2.82
167 168 5.930837 TTTATTTCAGGATTTCCGGCAAT 57.069 34.783 0.00 0.00 42.08 3.56
168 169 5.163457 GGATTTATTTCAGGATTTCCGGCAA 60.163 40.000 0.00 0.00 42.08 4.52
169 170 4.340950 GGATTTATTTCAGGATTTCCGGCA 59.659 41.667 0.00 0.00 42.08 5.69
170 171 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
171 172 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
179 180 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
180 181 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
181 182 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
182 183 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
183 184 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
184 185 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
185 186 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
186 187 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
187 188 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
188 189 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
189 190 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
190 191 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
191 192 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
192 193 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
193 194 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
194 195 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
195 196 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
196 197 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
197 198 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
198 199 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
199 200 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
200 201 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
201 202 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
202 203 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
203 204 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
204 205 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
205 206 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
206 207 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
222 223 1.568597 TGGTATTCCCAACCCATCAGG 59.431 52.381 0.00 0.00 41.50 3.86
232 233 1.688811 GTGGGCAGTGGTATTCCCA 59.311 57.895 1.57 1.57 45.87 4.37
233 234 1.076995 GGTGGGCAGTGGTATTCCC 60.077 63.158 0.00 0.00 39.22 3.97
234 235 1.209621 TAGGTGGGCAGTGGTATTCC 58.790 55.000 0.00 0.00 0.00 3.01
235 236 2.640184 GTTAGGTGGGCAGTGGTATTC 58.360 52.381 0.00 0.00 0.00 1.75
236 237 1.283905 GGTTAGGTGGGCAGTGGTATT 59.716 52.381 0.00 0.00 0.00 1.89
237 238 0.916809 GGTTAGGTGGGCAGTGGTAT 59.083 55.000 0.00 0.00 0.00 2.73
238 239 0.474079 TGGTTAGGTGGGCAGTGGTA 60.474 55.000 0.00 0.00 0.00 3.25
239 240 1.140134 ATGGTTAGGTGGGCAGTGGT 61.140 55.000 0.00 0.00 0.00 4.16
240 241 0.394352 GATGGTTAGGTGGGCAGTGG 60.394 60.000 0.00 0.00 0.00 4.00
241 242 0.620556 AGATGGTTAGGTGGGCAGTG 59.379 55.000 0.00 0.00 0.00 3.66
242 243 0.912486 GAGATGGTTAGGTGGGCAGT 59.088 55.000 0.00 0.00 0.00 4.40
243 244 0.911769 TGAGATGGTTAGGTGGGCAG 59.088 55.000 0.00 0.00 0.00 4.85
244 245 1.004277 GTTGAGATGGTTAGGTGGGCA 59.996 52.381 0.00 0.00 0.00 5.36
245 246 1.682087 GGTTGAGATGGTTAGGTGGGC 60.682 57.143 0.00 0.00 0.00 5.36
246 247 1.633432 TGGTTGAGATGGTTAGGTGGG 59.367 52.381 0.00 0.00 0.00 4.61
247 248 2.039746 TGTGGTTGAGATGGTTAGGTGG 59.960 50.000 0.00 0.00 0.00 4.61
248 249 3.338249 CTGTGGTTGAGATGGTTAGGTG 58.662 50.000 0.00 0.00 0.00 4.00
249 250 2.305927 CCTGTGGTTGAGATGGTTAGGT 59.694 50.000 0.00 0.00 0.00 3.08
250 251 2.305927 ACCTGTGGTTGAGATGGTTAGG 59.694 50.000 0.00 0.00 27.29 2.69
251 252 3.703001 ACCTGTGGTTGAGATGGTTAG 57.297 47.619 0.00 0.00 27.29 2.34
265 266 2.718747 TACCGGCGAACCAACCTGTG 62.719 60.000 9.30 0.00 34.57 3.66
266 267 2.509651 TACCGGCGAACCAACCTGT 61.510 57.895 9.30 0.00 34.57 4.00
267 268 2.030958 GTACCGGCGAACCAACCTG 61.031 63.158 9.30 0.00 34.57 4.00
268 269 2.344872 GTACCGGCGAACCAACCT 59.655 61.111 9.30 0.00 34.57 3.50
269 270 2.030862 TGTACCGGCGAACCAACC 59.969 61.111 9.30 0.00 34.57 3.77
270 271 0.038343 TACTGTACCGGCGAACCAAC 60.038 55.000 9.30 0.00 34.57 3.77
271 272 0.244450 CTACTGTACCGGCGAACCAA 59.756 55.000 9.30 0.00 34.57 3.67
272 273 1.885157 CTACTGTACCGGCGAACCA 59.115 57.895 9.30 0.00 34.57 3.67
273 274 1.517913 GCTACTGTACCGGCGAACC 60.518 63.158 9.30 0.00 0.00 3.62
274 275 0.179119 ATGCTACTGTACCGGCGAAC 60.179 55.000 9.30 6.97 0.00 3.95
275 276 0.101759 GATGCTACTGTACCGGCGAA 59.898 55.000 9.30 0.00 0.00 4.70
276 277 1.033202 TGATGCTACTGTACCGGCGA 61.033 55.000 9.30 0.00 0.00 5.54
277 278 0.179121 TTGATGCTACTGTACCGGCG 60.179 55.000 0.00 0.00 0.00 6.46
278 279 1.571919 CTTGATGCTACTGTACCGGC 58.428 55.000 0.00 0.00 0.00 6.13
279 280 1.202533 CCCTTGATGCTACTGTACCGG 60.203 57.143 0.00 0.00 0.00 5.28
280 281 1.480954 ACCCTTGATGCTACTGTACCG 59.519 52.381 0.00 0.00 0.00 4.02
281 282 2.906354 CACCCTTGATGCTACTGTACC 58.094 52.381 0.00 0.00 0.00 3.34
282 283 2.280628 GCACCCTTGATGCTACTGTAC 58.719 52.381 0.00 0.00 40.08 2.90
283 284 1.134818 CGCACCCTTGATGCTACTGTA 60.135 52.381 0.00 0.00 41.10 2.74
284 285 0.391661 CGCACCCTTGATGCTACTGT 60.392 55.000 0.00 0.00 41.10 3.55
285 286 0.391661 ACGCACCCTTGATGCTACTG 60.392 55.000 0.00 0.00 41.10 2.74
286 287 0.391661 CACGCACCCTTGATGCTACT 60.392 55.000 0.00 0.00 41.10 2.57
287 288 0.673644 ACACGCACCCTTGATGCTAC 60.674 55.000 0.00 0.00 41.10 3.58
288 289 0.036164 AACACGCACCCTTGATGCTA 59.964 50.000 0.00 0.00 41.10 3.49
289 290 1.228245 AACACGCACCCTTGATGCT 60.228 52.632 0.00 0.00 41.10 3.79
290 291 1.081242 CAACACGCACCCTTGATGC 60.081 57.895 0.00 0.00 39.81 3.91
291 292 1.081242 GCAACACGCACCCTTGATG 60.081 57.895 0.00 0.00 41.79 3.07
292 293 3.354678 GCAACACGCACCCTTGAT 58.645 55.556 0.00 0.00 41.79 2.57
301 302 3.287121 CTGCTCGTCTGCAACACGC 62.287 63.158 12.04 7.47 42.83 5.34
302 303 1.880601 GACTGCTCGTCTGCAACACG 61.881 60.000 10.87 10.87 42.83 4.49
303 304 0.875908 TGACTGCTCGTCTGCAACAC 60.876 55.000 7.94 0.00 42.83 3.32
304 305 0.033920 ATGACTGCTCGTCTGCAACA 59.966 50.000 7.94 0.00 42.83 3.33
305 306 0.441533 CATGACTGCTCGTCTGCAAC 59.558 55.000 7.94 0.00 42.83 4.17
306 307 0.033920 ACATGACTGCTCGTCTGCAA 59.966 50.000 0.00 0.00 42.83 4.08
307 308 0.887933 TACATGACTGCTCGTCTGCA 59.112 50.000 0.00 0.00 43.25 4.41
308 309 2.123342 GATACATGACTGCTCGTCTGC 58.877 52.381 0.00 0.00 43.25 4.26
309 310 2.099756 TGGATACATGACTGCTCGTCTG 59.900 50.000 0.00 6.50 46.17 3.51
310 311 2.379005 TGGATACATGACTGCTCGTCT 58.621 47.619 0.00 0.00 46.17 4.18
311 312 2.871182 TGGATACATGACTGCTCGTC 57.129 50.000 0.00 0.53 46.17 4.20
334 335 2.817901 CATACTTGTACACGGTAGGCC 58.182 52.381 4.21 0.00 0.00 5.19
335 336 2.199236 GCATACTTGTACACGGTAGGC 58.801 52.381 20.86 20.86 36.40 3.93
336 337 2.456989 CGCATACTTGTACACGGTAGG 58.543 52.381 12.59 12.59 0.00 3.18
337 338 1.850441 GCGCATACTTGTACACGGTAG 59.150 52.381 0.30 0.00 0.00 3.18
338 339 1.201880 TGCGCATACTTGTACACGGTA 59.798 47.619 5.66 7.23 0.00 4.02
339 340 0.038067 TGCGCATACTTGTACACGGT 60.038 50.000 5.66 5.24 0.00 4.83
340 341 0.368907 GTGCGCATACTTGTACACGG 59.631 55.000 15.91 0.00 0.00 4.94
341 342 0.023229 CGTGCGCATACTTGTACACG 59.977 55.000 15.91 4.00 43.01 4.49
342 343 0.368907 CCGTGCGCATACTTGTACAC 59.631 55.000 15.91 0.00 0.00 2.90
343 344 1.355796 GCCGTGCGCATACTTGTACA 61.356 55.000 15.91 0.00 37.47 2.90
344 345 1.347221 GCCGTGCGCATACTTGTAC 59.653 57.895 15.91 0.00 37.47 2.90
345 346 3.788817 GCCGTGCGCATACTTGTA 58.211 55.556 15.91 0.00 37.47 2.41
356 357 1.492319 TTGTACTGTTCACGCCGTGC 61.492 55.000 13.39 0.00 32.98 5.34
357 358 0.931702 TTTGTACTGTTCACGCCGTG 59.068 50.000 11.80 11.80 34.45 4.94
358 359 1.214367 CTTTGTACTGTTCACGCCGT 58.786 50.000 0.00 0.00 0.00 5.68
359 360 0.110823 GCTTTGTACTGTTCACGCCG 60.111 55.000 0.00 0.00 0.00 6.46
360 361 0.941542 TGCTTTGTACTGTTCACGCC 59.058 50.000 0.00 0.00 0.00 5.68
361 362 1.864711 TCTGCTTTGTACTGTTCACGC 59.135 47.619 0.00 0.00 0.00 5.34
362 363 4.732285 ATTCTGCTTTGTACTGTTCACG 57.268 40.909 0.00 0.00 0.00 4.35
363 364 6.400091 CGACTATTCTGCTTTGTACTGTTCAC 60.400 42.308 0.00 0.00 0.00 3.18
364 365 5.633601 CGACTATTCTGCTTTGTACTGTTCA 59.366 40.000 0.00 0.00 0.00 3.18
365 366 5.634020 ACGACTATTCTGCTTTGTACTGTTC 59.366 40.000 0.00 0.00 0.00 3.18
366 367 5.539048 ACGACTATTCTGCTTTGTACTGTT 58.461 37.500 0.00 0.00 0.00 3.16
367 368 5.135508 ACGACTATTCTGCTTTGTACTGT 57.864 39.130 0.00 0.00 0.00 3.55
368 369 4.563184 GGACGACTATTCTGCTTTGTACTG 59.437 45.833 0.00 0.00 0.00 2.74
369 370 4.219944 TGGACGACTATTCTGCTTTGTACT 59.780 41.667 0.00 0.00 0.00 2.73
370 371 4.491676 TGGACGACTATTCTGCTTTGTAC 58.508 43.478 0.00 0.00 0.00 2.90
371 372 4.794278 TGGACGACTATTCTGCTTTGTA 57.206 40.909 0.00 0.00 0.00 2.41
372 373 3.678056 TGGACGACTATTCTGCTTTGT 57.322 42.857 0.00 0.00 0.00 2.83
373 374 3.243877 CGATGGACGACTATTCTGCTTTG 59.756 47.826 0.00 0.00 45.77 2.77
374 375 3.119101 ACGATGGACGACTATTCTGCTTT 60.119 43.478 0.00 0.00 45.77 3.51
375 376 2.427453 ACGATGGACGACTATTCTGCTT 59.573 45.455 0.00 0.00 45.77 3.91
376 377 2.025155 ACGATGGACGACTATTCTGCT 58.975 47.619 0.00 0.00 45.77 4.24
377 378 2.120232 CACGATGGACGACTATTCTGC 58.880 52.381 0.00 0.00 45.77 4.26
378 379 3.364062 GTCACGATGGACGACTATTCTG 58.636 50.000 0.00 0.00 45.77 3.02
379 380 3.694535 GTCACGATGGACGACTATTCT 57.305 47.619 0.00 0.00 45.77 2.40
388 389 2.319011 TAGAGCGCGTCACGATGGAC 62.319 60.000 8.43 0.00 43.08 4.02
389 390 1.444917 ATAGAGCGCGTCACGATGGA 61.445 55.000 8.43 0.00 43.08 3.41
390 391 1.008424 ATAGAGCGCGTCACGATGG 60.008 57.895 8.43 0.00 43.08 3.51
391 392 1.870268 GCATAGAGCGCGTCACGATG 61.870 60.000 8.43 11.55 43.08 3.84
395 396 2.962253 GGGCATAGAGCGCGTCAC 60.962 66.667 8.43 0.00 46.66 3.67
402 403 1.409427 ACAAGTCTACGGGCATAGAGC 59.591 52.381 0.00 0.00 44.65 4.09
403 404 4.278669 ACATACAAGTCTACGGGCATAGAG 59.721 45.833 0.00 0.00 31.75 2.43
404 405 4.212716 ACATACAAGTCTACGGGCATAGA 58.787 43.478 0.00 0.00 0.00 1.98
405 406 4.585955 ACATACAAGTCTACGGGCATAG 57.414 45.455 0.00 0.00 0.00 2.23
406 407 4.888823 TGTACATACAAGTCTACGGGCATA 59.111 41.667 0.00 0.00 32.40 3.14
407 408 3.702548 TGTACATACAAGTCTACGGGCAT 59.297 43.478 0.00 0.00 32.40 4.40
408 409 3.090790 TGTACATACAAGTCTACGGGCA 58.909 45.455 0.00 0.00 32.40 5.36
409 410 3.703420 CTGTACATACAAGTCTACGGGC 58.297 50.000 0.00 0.00 35.50 6.13
410 411 3.129813 TGCTGTACATACAAGTCTACGGG 59.870 47.826 0.00 0.00 35.50 5.28
411 412 4.365899 TGCTGTACATACAAGTCTACGG 57.634 45.455 0.00 0.00 35.50 4.02
412 413 6.310467 ACAAATGCTGTACATACAAGTCTACG 59.690 38.462 0.00 0.00 38.34 3.51
413 414 7.596749 ACAAATGCTGTACATACAAGTCTAC 57.403 36.000 0.00 0.00 38.34 2.59
414 415 8.745590 TCTACAAATGCTGTACATACAAGTCTA 58.254 33.333 0.00 0.00 38.34 2.59
415 416 7.611770 TCTACAAATGCTGTACATACAAGTCT 58.388 34.615 0.00 0.00 38.34 3.24
416 417 7.827819 TCTACAAATGCTGTACATACAAGTC 57.172 36.000 0.00 0.00 38.34 3.01
417 418 7.824289 ACATCTACAAATGCTGTACATACAAGT 59.176 33.333 0.00 2.37 38.34 3.16
418 419 8.201554 ACATCTACAAATGCTGTACATACAAG 57.798 34.615 0.00 0.00 38.34 3.16
419 420 7.010091 CGACATCTACAAATGCTGTACATACAA 59.990 37.037 0.00 0.00 38.34 2.41
420 421 6.475402 CGACATCTACAAATGCTGTACATACA 59.525 38.462 0.00 0.00 38.34 2.29
421 422 6.562270 GCGACATCTACAAATGCTGTACATAC 60.562 42.308 0.00 0.00 38.34 2.39
422 423 5.462068 GCGACATCTACAAATGCTGTACATA 59.538 40.000 0.00 0.00 38.34 2.29
423 424 4.271049 GCGACATCTACAAATGCTGTACAT 59.729 41.667 0.00 0.00 42.30 2.29
424 425 3.616821 GCGACATCTACAAATGCTGTACA 59.383 43.478 0.00 0.00 39.64 2.90
425 426 3.616821 TGCGACATCTACAAATGCTGTAC 59.383 43.478 0.00 0.00 39.64 2.90
426 427 3.616821 GTGCGACATCTACAAATGCTGTA 59.383 43.478 0.00 0.00 39.64 2.74
427 428 2.416547 GTGCGACATCTACAAATGCTGT 59.583 45.455 0.00 0.00 42.47 4.40
428 429 2.535534 CGTGCGACATCTACAAATGCTG 60.536 50.000 0.00 0.00 0.00 4.41
429 430 1.660607 CGTGCGACATCTACAAATGCT 59.339 47.619 0.00 0.00 0.00 3.79
430 431 1.658596 TCGTGCGACATCTACAAATGC 59.341 47.619 0.00 0.00 0.00 3.56
431 432 5.829233 ATATCGTGCGACATCTACAAATG 57.171 39.130 0.00 0.00 0.00 2.32
432 433 6.035005 GCATATATCGTGCGACATCTACAAAT 59.965 38.462 0.00 0.00 32.29 2.32
433 434 5.344933 GCATATATCGTGCGACATCTACAAA 59.655 40.000 0.00 0.00 32.29 2.83
434 435 4.857037 GCATATATCGTGCGACATCTACAA 59.143 41.667 0.00 0.00 32.29 2.41
435 436 4.083003 TGCATATATCGTGCGACATCTACA 60.083 41.667 0.00 0.00 45.37 2.74
436 437 4.412207 TGCATATATCGTGCGACATCTAC 58.588 43.478 0.00 0.00 45.37 2.59
437 438 4.695217 TGCATATATCGTGCGACATCTA 57.305 40.909 0.00 0.00 45.37 1.98
438 439 3.575965 TGCATATATCGTGCGACATCT 57.424 42.857 0.00 0.00 45.37 2.90
439 440 4.571889 CATTGCATATATCGTGCGACATC 58.428 43.478 5.36 0.00 45.37 3.06
440 441 3.181517 GCATTGCATATATCGTGCGACAT 60.182 43.478 3.15 0.00 45.37 3.06
441 442 2.157474 GCATTGCATATATCGTGCGACA 59.843 45.455 3.15 0.00 45.37 4.35
442 443 2.157474 TGCATTGCATATATCGTGCGAC 59.843 45.455 7.38 0.00 45.37 5.19
443 444 2.411904 TGCATTGCATATATCGTGCGA 58.588 42.857 7.38 5.65 45.37 5.10
444 445 2.878906 TGCATTGCATATATCGTGCG 57.121 45.000 7.38 0.00 45.37 5.34
455 456 0.109365 GCGTTGTACCATGCATTGCA 60.109 50.000 14.72 14.72 44.86 4.08
456 457 0.109365 TGCGTTGTACCATGCATTGC 60.109 50.000 9.65 0.46 31.31 3.56
457 458 1.467883 CCTGCGTTGTACCATGCATTG 60.468 52.381 13.70 0.00 36.64 2.82
458 459 0.810648 CCTGCGTTGTACCATGCATT 59.189 50.000 13.70 0.00 36.64 3.56
459 460 1.656818 GCCTGCGTTGTACCATGCAT 61.657 55.000 13.70 0.00 36.64 3.96
460 461 2.331893 GCCTGCGTTGTACCATGCA 61.332 57.895 12.79 12.79 35.75 3.96
461 462 2.485122 GCCTGCGTTGTACCATGC 59.515 61.111 4.22 4.22 0.00 4.06
462 463 2.784596 CGCCTGCGTTGTACCATG 59.215 61.111 2.83 0.00 34.35 3.66
463 464 3.124921 GCGCCTGCGTTGTACCAT 61.125 61.111 13.57 0.00 42.09 3.55
479 480 2.784712 CGATATGACGGACGAGTGC 58.215 57.895 0.00 0.00 0.00 4.40
488 489 2.095617 TGTACGTATGCCCGATATGACG 60.096 50.000 0.00 0.00 36.42 4.35
489 490 3.240069 GTGTACGTATGCCCGATATGAC 58.760 50.000 0.00 0.00 0.00 3.06
490 491 2.095617 CGTGTACGTATGCCCGATATGA 60.096 50.000 0.00 0.00 34.11 2.15
491 492 2.247637 CGTGTACGTATGCCCGATATG 58.752 52.381 0.00 0.00 34.11 1.78
492 493 1.401931 GCGTGTACGTATGCCCGATAT 60.402 52.381 0.00 0.00 42.22 1.63
493 494 0.040157 GCGTGTACGTATGCCCGATA 60.040 55.000 0.00 0.00 42.22 2.92
494 495 1.299620 GCGTGTACGTATGCCCGAT 60.300 57.895 0.00 0.00 42.22 4.18
495 496 2.102749 GCGTGTACGTATGCCCGA 59.897 61.111 0.00 0.00 42.22 5.14
496 497 3.317036 CGCGTGTACGTATGCCCG 61.317 66.667 0.00 0.22 42.22 6.13
497 498 1.942712 CTCGCGTGTACGTATGCCC 60.943 63.158 5.77 0.00 42.22 5.36
498 499 1.942712 CCTCGCGTGTACGTATGCC 60.943 63.158 5.77 0.00 42.22 4.40
499 500 1.942712 CCCTCGCGTGTACGTATGC 60.943 63.158 5.77 2.88 42.22 3.14
500 501 1.298863 CCCCTCGCGTGTACGTATG 60.299 63.158 5.77 0.00 42.22 2.39
501 502 0.463654 TACCCCTCGCGTGTACGTAT 60.464 55.000 5.77 0.00 42.22 3.06
502 503 0.463654 ATACCCCTCGCGTGTACGTA 60.464 55.000 5.77 3.95 42.22 3.57
503 504 1.750399 ATACCCCTCGCGTGTACGT 60.750 57.895 5.77 0.00 42.22 3.57
504 505 1.298863 CATACCCCTCGCGTGTACG 60.299 63.158 5.77 0.00 43.27 3.67
505 506 0.672342 ATCATACCCCTCGCGTGTAC 59.328 55.000 5.77 0.00 0.00 2.90
506 507 0.671796 CATCATACCCCTCGCGTGTA 59.328 55.000 5.77 4.53 0.00 2.90
507 508 1.441729 CATCATACCCCTCGCGTGT 59.558 57.895 5.77 2.14 0.00 4.49
508 509 1.956170 GCATCATACCCCTCGCGTG 60.956 63.158 5.77 2.75 0.00 5.34
509 510 2.421739 GCATCATACCCCTCGCGT 59.578 61.111 5.77 0.00 0.00 6.01
510 511 2.734723 CGCATCATACCCCTCGCG 60.735 66.667 0.00 0.00 36.47 5.87
511 512 3.044305 GCGCATCATACCCCTCGC 61.044 66.667 0.30 0.00 35.82 5.03
512 513 2.357517 GGCGCATCATACCCCTCG 60.358 66.667 10.83 0.00 0.00 4.63
513 514 1.004440 GAGGCGCATCATACCCCTC 60.004 63.158 18.55 2.76 35.75 4.30
514 515 2.872388 CGAGGCGCATCATACCCCT 61.872 63.158 23.09 0.00 0.00 4.79
515 516 2.357517 CGAGGCGCATCATACCCC 60.358 66.667 23.09 0.00 0.00 4.95
516 517 1.956170 CACGAGGCGCATCATACCC 60.956 63.158 23.09 0.00 0.00 3.69
517 518 0.319900 ATCACGAGGCGCATCATACC 60.320 55.000 23.09 0.00 0.00 2.73
518 519 1.457303 GAATCACGAGGCGCATCATAC 59.543 52.381 23.09 3.13 0.00 2.39
519 520 1.068434 TGAATCACGAGGCGCATCATA 59.932 47.619 23.09 6.66 0.00 2.15
520 521 0.179076 TGAATCACGAGGCGCATCAT 60.179 50.000 23.09 2.98 0.00 2.45
521 522 1.083806 GTGAATCACGAGGCGCATCA 61.084 55.000 23.09 2.48 0.00 3.07
522 523 1.638467 GTGAATCACGAGGCGCATC 59.362 57.895 12.96 12.96 0.00 3.91
523 524 3.799753 GTGAATCACGAGGCGCAT 58.200 55.556 10.83 0.00 0.00 4.73
555 556 4.264638 GAGAGGGAGCGAGCGAGC 62.265 72.222 0.00 0.00 37.41 5.03
556 557 3.591835 GGAGAGGGAGCGAGCGAG 61.592 72.222 0.00 0.00 0.00 5.03
559 560 3.223589 GAGGGAGAGGGAGCGAGC 61.224 72.222 0.00 0.00 0.00 5.03
560 561 2.904866 CGAGGGAGAGGGAGCGAG 60.905 72.222 0.00 0.00 0.00 5.03
564 565 3.213402 GACGCGAGGGAGAGGGAG 61.213 72.222 15.93 0.00 0.00 4.30
583 584 0.168128 AATTTAACGCAGGCACTCGC 59.832 50.000 0.00 0.00 34.60 5.03
584 585 2.611974 AAATTTAACGCAGGCACTCG 57.388 45.000 0.00 0.00 34.60 4.18
585 586 4.619760 GGTTAAAATTTAACGCAGGCACTC 59.380 41.667 18.77 2.42 34.60 3.51
586 587 4.038162 TGGTTAAAATTTAACGCAGGCACT 59.962 37.500 18.77 0.00 43.88 4.40
587 588 4.299978 TGGTTAAAATTTAACGCAGGCAC 58.700 39.130 18.77 7.04 0.00 5.01
588 589 4.585955 TGGTTAAAATTTAACGCAGGCA 57.414 36.364 18.77 10.25 0.00 4.75
589 590 4.143200 GCTTGGTTAAAATTTAACGCAGGC 60.143 41.667 23.47 23.47 0.00 4.85
590 591 4.089351 CGCTTGGTTAAAATTTAACGCAGG 59.911 41.667 18.77 17.62 0.00 4.85
591 592 4.432373 GCGCTTGGTTAAAATTTAACGCAG 60.432 41.667 18.77 17.05 41.98 5.18
592 593 3.425858 GCGCTTGGTTAAAATTTAACGCA 59.574 39.130 18.77 15.35 41.98 5.24
593 594 3.479072 CGCGCTTGGTTAAAATTTAACGC 60.479 43.478 18.77 17.10 39.26 4.84
594 595 3.907194 TCGCGCTTGGTTAAAATTTAACG 59.093 39.130 18.77 10.55 0.00 3.18
595 596 4.201456 GCTCGCGCTTGGTTAAAATTTAAC 60.201 41.667 17.64 17.64 0.00 2.01
596 597 3.915569 GCTCGCGCTTGGTTAAAATTTAA 59.084 39.130 5.56 0.00 0.00 1.52
597 598 3.494232 GCTCGCGCTTGGTTAAAATTTA 58.506 40.909 5.56 0.00 0.00 1.40
598 599 2.324860 GCTCGCGCTTGGTTAAAATTT 58.675 42.857 5.56 0.00 0.00 1.82
599 600 1.727857 CGCTCGCGCTTGGTTAAAATT 60.728 47.619 5.56 0.00 0.00 1.82
600 601 0.179200 CGCTCGCGCTTGGTTAAAAT 60.179 50.000 5.56 0.00 0.00 1.82
601 602 1.205568 CGCTCGCGCTTGGTTAAAA 59.794 52.632 5.56 0.00 0.00 1.52
602 603 2.673114 CCGCTCGCGCTTGGTTAAA 61.673 57.895 5.56 0.00 38.24 1.52
603 604 2.489539 TACCGCTCGCGCTTGGTTAA 62.490 55.000 18.56 2.31 38.24 2.01
604 605 2.287457 ATACCGCTCGCGCTTGGTTA 62.287 55.000 18.56 7.77 38.24 2.85
605 606 2.287457 TATACCGCTCGCGCTTGGTT 62.287 55.000 18.56 10.64 38.24 3.67
606 607 2.679132 CTATACCGCTCGCGCTTGGT 62.679 60.000 17.70 17.70 38.24 3.67
607 608 2.016704 CTATACCGCTCGCGCTTGG 61.017 63.158 5.56 4.82 38.24 3.61
608 609 2.016704 CCTATACCGCTCGCGCTTG 61.017 63.158 5.56 0.00 38.24 4.01
609 610 1.731433 TTCCTATACCGCTCGCGCTT 61.731 55.000 5.56 0.00 38.24 4.68
610 611 1.731433 TTTCCTATACCGCTCGCGCT 61.731 55.000 5.56 0.00 38.24 5.92
611 612 0.666577 ATTTCCTATACCGCTCGCGC 60.667 55.000 0.00 0.00 38.24 6.86
612 613 1.779569 AATTTCCTATACCGCTCGCG 58.220 50.000 0.00 0.00 39.44 5.87
613 614 3.645884 TGTAATTTCCTATACCGCTCGC 58.354 45.455 0.00 0.00 0.00 5.03
614 615 5.117355 TCTGTAATTTCCTATACCGCTCG 57.883 43.478 0.00 0.00 0.00 5.03
615 616 5.243283 TCCTCTGTAATTTCCTATACCGCTC 59.757 44.000 0.00 0.00 0.00 5.03
616 617 5.145564 TCCTCTGTAATTTCCTATACCGCT 58.854 41.667 0.00 0.00 0.00 5.52
617 618 5.464030 TCCTCTGTAATTTCCTATACCGC 57.536 43.478 0.00 0.00 0.00 5.68
618 619 5.010719 TGCTCCTCTGTAATTTCCTATACCG 59.989 44.000 0.00 0.00 0.00 4.02
619 620 6.224584 GTGCTCCTCTGTAATTTCCTATACC 58.775 44.000 0.00 0.00 0.00 2.73
620 621 6.224584 GGTGCTCCTCTGTAATTTCCTATAC 58.775 44.000 0.00 0.00 0.00 1.47
621 622 5.307196 GGGTGCTCCTCTGTAATTTCCTATA 59.693 44.000 4.53 0.00 0.00 1.31
622 623 4.103311 GGGTGCTCCTCTGTAATTTCCTAT 59.897 45.833 4.53 0.00 0.00 2.57
623 624 3.454812 GGGTGCTCCTCTGTAATTTCCTA 59.545 47.826 4.53 0.00 0.00 2.94
624 625 2.239907 GGGTGCTCCTCTGTAATTTCCT 59.760 50.000 4.53 0.00 0.00 3.36
697 698 2.846206 ACAGGGCATTGATTAGGACAGA 59.154 45.455 0.00 0.00 0.00 3.41
2614 2927 6.407412 CCACCGATATCTATGCCTCACATTAT 60.407 42.308 0.34 0.00 40.38 1.28
2618 2931 2.562738 CCACCGATATCTATGCCTCACA 59.437 50.000 0.34 0.00 0.00 3.58
2673 2986 3.819902 GACTAGCCTAACAGTATACCGCT 59.180 47.826 0.00 0.49 0.00 5.52
2674 2987 3.567164 TGACTAGCCTAACAGTATACCGC 59.433 47.826 0.00 0.00 0.00 5.68
2675 2988 5.961396 ATGACTAGCCTAACAGTATACCG 57.039 43.478 0.00 0.00 0.00 4.02
2676 2989 7.999450 ACTATGACTAGCCTAACAGTATACC 57.001 40.000 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.