Multiple sequence alignment - TraesCS5B01G225500
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS5B01G225500
chr5B
100.000
4511
0
0
1
4511
401012674
401008164
0
8331
1
TraesCS5B01G225500
chr5D
95.793
4469
141
24
60
4511
341568945
341564507
0
7167
2
TraesCS5B01G225500
chr5A
93.742
4490
175
35
60
4510
442703776
442699354
0
6637
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS5B01G225500
chr5B
401008164
401012674
4510
True
8331
8331
100.000
1
4511
1
chr5B.!!$R1
4510
1
TraesCS5B01G225500
chr5D
341564507
341568945
4438
True
7167
7167
95.793
60
4511
1
chr5D.!!$R1
4451
2
TraesCS5B01G225500
chr5A
442699354
442703776
4422
True
6637
6637
93.742
60
4510
1
chr5A.!!$R1
4450
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
922
933
0.255890
GGGCTGCATCAGGTTTAGGA
59.744
55.000
0.50
0.0
31.21
2.94
F
1518
1536
0.036164
TGCAGTATGAGGGCAACGTT
59.964
50.000
0.00
0.0
39.69
3.99
F
2920
2940
2.258286
GGTTTTGCTGCGGCGATT
59.742
55.556
12.98
0.0
42.25
3.34
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2711
2731
2.044551
CCTGCTTGGGAAGGGCTC
60.045
66.667
0.0
0.0
34.53
4.70
R
3189
3209
1.480212
ATGACACGGGACAGGAGCAA
61.480
55.000
0.0
0.0
0.00
3.91
R
4008
4033
2.092753
CACATAGTGGAATGGAGCAGGT
60.093
50.000
0.0
0.0
0.00
4.00
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
25
26
8.439993
GTTTGAGTCTTTTTCTTCTTAGGTCT
57.560
34.615
0.00
0.00
0.00
3.85
26
27
9.543783
GTTTGAGTCTTTTTCTTCTTAGGTCTA
57.456
33.333
0.00
0.00
0.00
2.59
42
43
9.186837
TCTTAGGTCTAATAGACTTGTAGTTGG
57.813
37.037
18.64
2.63
44.46
3.77
43
44
8.890410
TTAGGTCTAATAGACTTGTAGTTGGT
57.110
34.615
18.64
0.00
44.46
3.67
44
45
7.793948
AGGTCTAATAGACTTGTAGTTGGTT
57.206
36.000
18.64
0.00
44.46
3.67
45
46
7.838884
AGGTCTAATAGACTTGTAGTTGGTTC
58.161
38.462
18.64
0.00
44.46
3.62
46
47
6.750963
GGTCTAATAGACTTGTAGTTGGTTCG
59.249
42.308
18.64
0.00
44.46
3.95
47
48
7.362401
GGTCTAATAGACTTGTAGTTGGTTCGA
60.362
40.741
18.64
0.00
44.46
3.71
48
49
7.697291
GTCTAATAGACTTGTAGTTGGTTCGAG
59.303
40.741
12.85
0.00
41.88
4.04
49
50
3.027974
AGACTTGTAGTTGGTTCGAGC
57.972
47.619
0.00
0.00
0.00
5.03
50
51
2.628657
AGACTTGTAGTTGGTTCGAGCT
59.371
45.455
0.00
0.00
0.00
4.09
51
52
2.731976
GACTTGTAGTTGGTTCGAGCTG
59.268
50.000
0.00
0.00
0.00
4.24
52
53
2.102588
ACTTGTAGTTGGTTCGAGCTGT
59.897
45.455
0.00
0.00
0.00
4.40
53
54
2.148916
TGTAGTTGGTTCGAGCTGTG
57.851
50.000
0.00
0.00
0.00
3.66
54
55
1.270094
TGTAGTTGGTTCGAGCTGTGG
60.270
52.381
0.00
0.00
0.00
4.17
55
56
1.045407
TAGTTGGTTCGAGCTGTGGT
58.955
50.000
0.00
0.00
0.00
4.16
56
57
1.045407
AGTTGGTTCGAGCTGTGGTA
58.955
50.000
0.00
0.00
0.00
3.25
57
58
1.623811
AGTTGGTTCGAGCTGTGGTAT
59.376
47.619
0.00
0.00
0.00
2.73
58
59
2.000447
GTTGGTTCGAGCTGTGGTATC
59.000
52.381
0.00
0.00
0.00
2.24
76
77
7.453126
TGTGGTATCAAGTGTTTGGGATTTAAT
59.547
33.333
0.00
0.00
34.97
1.40
83
84
9.717942
TCAAGTGTTTGGGATTTAATTTAATGG
57.282
29.630
0.00
0.00
34.97
3.16
84
85
9.500785
CAAGTGTTTGGGATTTAATTTAATGGT
57.499
29.630
0.00
0.00
0.00
3.55
435
436
1.262640
GGGTTCTCTCCCAGCCGTTA
61.263
60.000
0.00
0.00
46.30
3.18
438
439
0.895530
TTCTCTCCCAGCCGTTACAG
59.104
55.000
0.00
0.00
0.00
2.74
439
440
1.153549
CTCTCCCAGCCGTTACAGC
60.154
63.158
0.00
0.00
0.00
4.40
440
441
1.888436
CTCTCCCAGCCGTTACAGCA
61.888
60.000
0.00
0.00
0.00
4.41
441
442
1.448540
CTCCCAGCCGTTACAGCAG
60.449
63.158
0.00
0.00
0.00
4.24
442
443
3.127533
CCCAGCCGTTACAGCAGC
61.128
66.667
0.00
0.00
0.00
5.25
443
444
3.490759
CCAGCCGTTACAGCAGCG
61.491
66.667
0.00
0.00
0.00
5.18
444
445
4.152625
CAGCCGTTACAGCAGCGC
62.153
66.667
0.00
0.00
0.00
5.92
555
556
3.148279
CCTCTACGGCGGCTTCCT
61.148
66.667
13.24
0.00
0.00
3.36
587
588
4.144703
GTCCTTCCTCCCGTCGCC
62.145
72.222
0.00
0.00
0.00
5.54
604
605
1.014044
GCCACATCGCAGTCTTTCGA
61.014
55.000
0.00
0.00
39.17
3.71
634
635
5.452777
GTTGTGAGGTATGAGCTTGTTTTC
58.547
41.667
0.00
0.00
0.00
2.29
652
653
5.360144
TGTTTTCTTTTCATCCCGTGGTTAA
59.640
36.000
0.00
0.00
0.00
2.01
689
690
1.077285
TCGACGCCACCTAGATCCA
60.077
57.895
0.00
0.00
0.00
3.41
704
705
2.770868
ATCCACCCCTGTGAGCCTCA
62.771
60.000
0.00
0.00
45.76
3.86
760
767
7.391833
GTGGGATTTTAGAGATCTGTTGTTTCT
59.608
37.037
0.00
0.00
0.00
2.52
794
803
6.149973
GGTAAGTTTGGTTGTTAGGATACACC
59.850
42.308
0.00
0.00
41.41
4.16
804
813
6.327279
TGTTAGGATACACCGATGTGATAG
57.673
41.667
0.00
0.00
45.76
2.08
841
850
6.551736
TGCTTTCTTTCCTGTTTATTATCGC
58.448
36.000
0.00
0.00
0.00
4.58
856
865
0.667487
ATCGCCCGTCTATGATTGCG
60.667
55.000
0.00
0.00
43.05
4.85
915
926
0.462789
GAAATTGGGGCTGCATCAGG
59.537
55.000
0.50
0.00
31.21
3.86
922
933
0.255890
GGGCTGCATCAGGTTTAGGA
59.744
55.000
0.50
0.00
31.21
2.94
1219
1237
2.200373
TTCTAAACAAGGCAGCTCCC
57.800
50.000
0.00
0.00
34.51
4.30
1369
1387
1.318576
CCCACCGCAGAAAGAAAAGT
58.681
50.000
0.00
0.00
0.00
2.66
1455
1473
4.000988
ACTATGTTCCTTTCGCGAATTGT
58.999
39.130
24.05
9.86
0.00
2.71
1473
1491
6.567602
AATTGTCCCTATAAGAGCTTGACT
57.432
37.500
0.00
0.00
0.00
3.41
1506
1524
3.118261
CCATACAGAACTGGGTGCAGTAT
60.118
47.826
6.76
0.00
34.56
2.12
1518
1536
0.036164
TGCAGTATGAGGGCAACGTT
59.964
50.000
0.00
0.00
39.69
3.99
1579
1597
7.285566
AGGTGCTGATAAGTACATTGATCAAT
58.714
34.615
15.36
15.36
0.00
2.57
2043
2062
2.728690
TGTGCCATTTTGATGCAGTC
57.271
45.000
0.00
0.00
35.33
3.51
2243
2263
6.586344
CAGAACAAGATAGAGGAAATGGCTA
58.414
40.000
0.00
0.00
0.00
3.93
2395
2415
7.423844
AGATGATGTCTGGTATGTTTCTACA
57.576
36.000
0.00
0.00
35.31
2.74
2524
2544
6.624423
ACTGTCTGGTCAATGCATTATTTTC
58.376
36.000
12.53
1.45
0.00
2.29
2920
2940
2.258286
GGTTTTGCTGCGGCGATT
59.742
55.556
12.98
0.00
42.25
3.34
3041
3061
3.054434
TGACTGGTATGCCTTGTTATGCT
60.054
43.478
0.16
0.00
35.27
3.79
3042
3062
3.545703
ACTGGTATGCCTTGTTATGCTC
58.454
45.455
0.16
0.00
35.27
4.26
3133
3153
7.039011
TGTGAAGCTTTCTCTACTTATCCAAGA
60.039
37.037
0.00
0.00
35.60
3.02
3189
3209
9.953565
TTTCACCTTGTATAGCAATAAGTAAGT
57.046
29.630
0.00
0.00
36.36
2.24
3205
3225
1.696097
AAGTTGCTCCTGTCCCGTGT
61.696
55.000
0.00
0.00
0.00
4.49
3214
3234
1.270839
CCTGTCCCGTGTCATCAGTTT
60.271
52.381
0.00
0.00
0.00
2.66
3258
3278
5.198965
AGTAAGATTGCCAATGCTGATTCT
58.801
37.500
0.00
0.00
38.71
2.40
3454
3474
1.377366
CCCTCTAGTGCGCGAGAAGA
61.377
60.000
12.10
5.45
0.00
2.87
3593
3613
3.311990
AGATATGGAGTCATCAGGTGCA
58.688
45.455
0.00
0.00
34.96
4.57
3644
3664
2.036346
AGCAATGAAGCAACCAAGGTTC
59.964
45.455
0.51
0.00
44.13
3.62
3650
3670
0.110486
AGCAACCAAGGTTCATCGGT
59.890
50.000
0.51
0.00
36.00
4.69
3829
3849
3.443681
CCAGTAATCCCATTGCTTCGTTT
59.556
43.478
0.00
0.00
32.71
3.60
3886
3908
1.792949
CTGTGCTGTTACCTGAACGAC
59.207
52.381
0.00
0.00
41.35
4.34
3894
3916
2.380084
TACCTGAACGACCTGAATGC
57.620
50.000
0.00
0.00
0.00
3.56
3972
3997
3.864789
TTTTCTTCCTGTGAGGAGCTT
57.135
42.857
0.00
0.00
46.73
3.74
3973
3998
4.974645
TTTTCTTCCTGTGAGGAGCTTA
57.025
40.909
0.00
0.00
46.73
3.09
4307
4352
2.426738
CAGACAACAGGCAAGACCAAAA
59.573
45.455
0.00
0.00
43.14
2.44
4358
4403
7.018249
TCCTACTTCCTCCTAAAATTGACCTTT
59.982
37.037
0.00
0.00
0.00
3.11
4359
4404
7.337184
CCTACTTCCTCCTAAAATTGACCTTTC
59.663
40.741
0.00
0.00
0.00
2.62
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
0
1
8.439993
AGACCTAAGAAGAAAAAGACTCAAAC
57.560
34.615
0.00
0.00
0.00
2.93
16
17
9.186837
CCAACTACAAGTCTATTAGACCTAAGA
57.813
37.037
18.16
2.56
46.18
2.10
17
18
8.968969
ACCAACTACAAGTCTATTAGACCTAAG
58.031
37.037
18.16
13.28
46.18
2.18
18
19
8.890410
ACCAACTACAAGTCTATTAGACCTAA
57.110
34.615
18.16
3.65
46.18
2.69
19
20
8.890410
AACCAACTACAAGTCTATTAGACCTA
57.110
34.615
18.16
6.73
46.18
3.08
20
21
7.362747
CGAACCAACTACAAGTCTATTAGACCT
60.363
40.741
18.16
4.78
46.18
3.85
21
22
6.750963
CGAACCAACTACAAGTCTATTAGACC
59.249
42.308
18.16
3.35
46.18
3.85
22
23
7.533426
TCGAACCAACTACAAGTCTATTAGAC
58.467
38.462
14.79
14.79
45.38
2.59
23
24
7.627939
GCTCGAACCAACTACAAGTCTATTAGA
60.628
40.741
0.00
0.00
0.00
2.10
24
25
6.472808
GCTCGAACCAACTACAAGTCTATTAG
59.527
42.308
0.00
0.00
0.00
1.73
25
26
6.152323
AGCTCGAACCAACTACAAGTCTATTA
59.848
38.462
0.00
0.00
0.00
0.98
26
27
5.047235
AGCTCGAACCAACTACAAGTCTATT
60.047
40.000
0.00
0.00
0.00
1.73
27
28
4.463186
AGCTCGAACCAACTACAAGTCTAT
59.537
41.667
0.00
0.00
0.00
1.98
28
29
3.825014
AGCTCGAACCAACTACAAGTCTA
59.175
43.478
0.00
0.00
0.00
2.59
29
30
2.628657
AGCTCGAACCAACTACAAGTCT
59.371
45.455
0.00
0.00
0.00
3.24
30
31
2.731976
CAGCTCGAACCAACTACAAGTC
59.268
50.000
0.00
0.00
0.00
3.01
31
32
2.102588
ACAGCTCGAACCAACTACAAGT
59.897
45.455
0.00
0.00
0.00
3.16
32
33
2.476619
CACAGCTCGAACCAACTACAAG
59.523
50.000
0.00
0.00
0.00
3.16
33
34
2.479837
CACAGCTCGAACCAACTACAA
58.520
47.619
0.00
0.00
0.00
2.41
34
35
1.270094
CCACAGCTCGAACCAACTACA
60.270
52.381
0.00
0.00
0.00
2.74
35
36
1.270147
ACCACAGCTCGAACCAACTAC
60.270
52.381
0.00
0.00
0.00
2.73
36
37
1.045407
ACCACAGCTCGAACCAACTA
58.955
50.000
0.00
0.00
0.00
2.24
37
38
1.045407
TACCACAGCTCGAACCAACT
58.955
50.000
0.00
0.00
0.00
3.16
38
39
2.000447
GATACCACAGCTCGAACCAAC
59.000
52.381
0.00
0.00
0.00
3.77
39
40
1.621317
TGATACCACAGCTCGAACCAA
59.379
47.619
0.00
0.00
0.00
3.67
40
41
1.262417
TGATACCACAGCTCGAACCA
58.738
50.000
0.00
0.00
0.00
3.67
41
42
2.271800
CTTGATACCACAGCTCGAACC
58.728
52.381
0.00
0.00
0.00
3.62
42
43
2.668457
CACTTGATACCACAGCTCGAAC
59.332
50.000
0.00
0.00
0.00
3.95
43
44
2.299013
ACACTTGATACCACAGCTCGAA
59.701
45.455
0.00
0.00
0.00
3.71
44
45
1.893137
ACACTTGATACCACAGCTCGA
59.107
47.619
0.00
0.00
0.00
4.04
45
46
2.370281
ACACTTGATACCACAGCTCG
57.630
50.000
0.00
0.00
0.00
5.03
46
47
3.189287
CCAAACACTTGATACCACAGCTC
59.811
47.826
0.00
0.00
34.14
4.09
47
48
3.149196
CCAAACACTTGATACCACAGCT
58.851
45.455
0.00
0.00
34.14
4.24
48
49
2.228822
CCCAAACACTTGATACCACAGC
59.771
50.000
0.00
0.00
34.14
4.40
49
50
3.750371
TCCCAAACACTTGATACCACAG
58.250
45.455
0.00
0.00
34.14
3.66
50
51
3.866703
TCCCAAACACTTGATACCACA
57.133
42.857
0.00
0.00
34.14
4.17
51
52
5.722021
AAATCCCAAACACTTGATACCAC
57.278
39.130
0.00
0.00
34.14
4.16
52
53
8.429237
AATTAAATCCCAAACACTTGATACCA
57.571
30.769
0.00
0.00
34.14
3.25
57
58
9.717942
CCATTAAATTAAATCCCAAACACTTGA
57.282
29.630
0.00
0.00
34.14
3.02
58
59
9.500785
ACCATTAAATTAAATCCCAAACACTTG
57.499
29.630
0.00
0.00
0.00
3.16
128
129
2.257207
ACCCGACTGGAAGATTCTCAA
58.743
47.619
0.00
0.00
37.43
3.02
129
130
1.938585
ACCCGACTGGAAGATTCTCA
58.061
50.000
0.00
0.00
37.43
3.27
130
131
4.182339
GTTTACCCGACTGGAAGATTCTC
58.818
47.826
0.00
0.00
37.43
2.87
386
387
0.902531
TCTCGGGGTTTTAGAGCTGG
59.097
55.000
0.00
0.00
32.42
4.85
448
449
3.659089
TAGGCGAACGGCAGCTTCC
62.659
63.158
21.28
0.00
46.16
3.46
500
501
3.470888
CTCGCGGGGGAGAATGGT
61.471
66.667
6.13
0.00
36.08
3.55
604
605
3.873801
GCTCATACCTCACAACCCAATGT
60.874
47.826
0.00
0.00
0.00
2.71
634
635
4.658071
CGAATTAACCACGGGATGAAAAG
58.342
43.478
0.00
0.00
0.00
2.27
652
653
0.692419
AGATCAGTGGAGGGGCGAAT
60.692
55.000
0.00
0.00
0.00
3.34
704
705
1.446907
CAGCAGGAGAAATGAAGCGT
58.553
50.000
0.00
0.00
0.00
5.07
712
713
0.674581
CATGTCGGCAGCAGGAGAAA
60.675
55.000
0.00
0.00
0.00
2.52
733
740
5.178797
ACAACAGATCTCTAAAATCCCACG
58.821
41.667
0.00
0.00
0.00
4.94
765
772
6.702716
TCCTAACAACCAAACTTACCAAAG
57.297
37.500
0.00
0.00
38.77
2.77
781
789
6.016527
GTCTATCACATCGGTGTATCCTAACA
60.017
42.308
0.00
0.00
45.45
2.41
794
803
2.535984
GTGGCTTTCGTCTATCACATCG
59.464
50.000
0.00
0.00
0.00
3.84
841
850
1.491670
CTGACGCAATCATAGACGGG
58.508
55.000
0.00
0.00
36.48
5.28
856
865
1.068541
GGAACCGCAATTTCACCTGAC
60.069
52.381
0.00
0.00
0.00
3.51
903
914
0.255890
TCCTAAACCTGATGCAGCCC
59.744
55.000
0.00
0.00
0.00
5.19
1227
1245
0.883370
ACTTCTTCACCGGCGAAACC
60.883
55.000
9.30
0.00
0.00
3.27
1272
1290
4.716784
TGATCTTGGCAAGGTGTATAGTCT
59.283
41.667
25.92
0.02
0.00
3.24
1369
1387
1.228124
GTGGTACCAGGCAGTGCAA
60.228
57.895
16.93
0.00
0.00
4.08
1455
1473
3.632604
CGACAGTCAAGCTCTTATAGGGA
59.367
47.826
0.41
0.00
0.00
4.20
1473
1491
3.258372
AGTTCTGTATGGCTTTCTCGACA
59.742
43.478
0.00
0.00
0.00
4.35
1506
1524
2.270352
ATCTGAAAACGTTGCCCTCA
57.730
45.000
0.00
2.07
0.00
3.86
1542
1560
0.397941
CAGCACCTTGAGGGAACTGA
59.602
55.000
1.54
0.00
44.43
3.41
1579
1597
3.563808
GCAATCGGTATAACTGATGCCAA
59.436
43.478
2.25
0.00
43.05
4.52
1741
1760
5.313280
TCTTTAACAAGTAAGCTCCCCAA
57.687
39.130
0.00
0.00
0.00
4.12
1906
1925
4.943705
GGAATCAAGCACCTAGAACAATGA
59.056
41.667
0.00
0.00
0.00
2.57
2243
2263
5.013599
AGACTTTCTCCCAACATAGAAGCTT
59.986
40.000
0.00
0.00
33.49
3.74
2341
2361
3.479489
TGATTCACACATCTGCACAGTT
58.521
40.909
0.00
0.00
0.00
3.16
2524
2544
3.262420
ACACATCTAAGTAGGCAAAGCG
58.738
45.455
0.00
0.00
0.00
4.68
2711
2731
2.044551
CCTGCTTGGGAAGGGCTC
60.045
66.667
0.00
0.00
34.53
4.70
3030
3050
3.706698
TCGAGATTCGAGCATAACAAGG
58.293
45.455
0.00
0.00
44.82
3.61
3042
3062
5.154932
ACAACTTTACTGAGTCGAGATTCG
58.845
41.667
0.00
0.00
42.10
3.34
3051
3071
6.823689
AGTTCATGACAACAACTTTACTGAGT
59.176
34.615
0.00
0.00
0.00
3.41
3133
3153
5.775701
ACTAGCGTGGATAAGATCATAGGTT
59.224
40.000
0.00
0.00
0.00
3.50
3189
3209
1.480212
ATGACACGGGACAGGAGCAA
61.480
55.000
0.00
0.00
0.00
3.91
3205
3225
7.717436
TGTTATACAAGGTGACAAAACTGATGA
59.283
33.333
0.00
0.00
0.00
2.92
3438
3458
1.669604
AGATCTTCTCGCGCACTAGA
58.330
50.000
8.75
3.83
0.00
2.43
3593
3613
5.243954
GGAGAAGAGTAGGCCATTTTTGTTT
59.756
40.000
5.01
0.00
0.00
2.83
3644
3664
7.436970
TGTTACAACAATATACTGCTACCGATG
59.563
37.037
0.00
0.00
35.67
3.84
3843
3865
7.933033
ACAGTAAAGTTACGGAAGAAATAACCA
59.067
33.333
8.11
0.00
38.65
3.67
3886
3908
6.998968
ATTCTTGAGTAGAAAGCATTCAGG
57.001
37.500
4.27
0.00
45.62
3.86
3965
3990
6.266131
TCCATTGTTCCATTATAAGCTCCT
57.734
37.500
0.00
0.00
0.00
3.69
3972
3997
6.778542
TCTCCCATCCATTGTTCCATTATA
57.221
37.500
0.00
0.00
0.00
0.98
3973
3998
5.668135
TCTCCCATCCATTGTTCCATTAT
57.332
39.130
0.00
0.00
0.00
1.28
4008
4033
2.092753
CACATAGTGGAATGGAGCAGGT
60.093
50.000
0.00
0.00
0.00
4.00
4331
4376
6.157123
AGGTCAATTTTAGGAGGAAGTAGGAG
59.843
42.308
0.00
0.00
0.00
3.69
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.