Multiple sequence alignment - TraesCS5B01G223000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G223000 chr5B 100.000 5323 0 0 1 5323 397838937 397844259 0.000000e+00 9830.0
1 TraesCS5B01G223000 chr5B 90.455 220 21 0 5020 5239 426799790 426799571 1.880000e-74 291.0
2 TraesCS5B01G223000 chr5D 92.268 2522 116 26 2308 4782 338668944 338671433 0.000000e+00 3504.0
3 TraesCS5B01G223000 chr5D 89.601 1154 61 24 663 1801 338667275 338668384 0.000000e+00 1411.0
4 TraesCS5B01G223000 chr5D 96.460 565 8 3 1714 2274 338668388 338668944 0.000000e+00 922.0
5 TraesCS5B01G223000 chr5D 84.676 633 44 23 4354 4955 339006837 339007447 2.760000e-162 582.0
6 TraesCS5B01G223000 chr5D 89.313 262 15 10 4766 5023 338671449 338671701 3.090000e-82 316.0
7 TraesCS5B01G223000 chr5D 87.097 279 24 5 1 268 338666466 338666743 6.700000e-79 305.0
8 TraesCS5B01G223000 chr5D 92.958 71 3 2 5250 5320 339007540 339007608 9.430000e-18 102.0
9 TraesCS5B01G223000 chr5D 92.308 65 2 1 4959 5023 339027931 339027992 7.340000e-14 89.8
10 TraesCS5B01G223000 chr5A 85.292 2264 173 73 663 2878 439557733 439559884 0.000000e+00 2189.0
11 TraesCS5B01G223000 chr5A 86.635 853 78 18 2920 3762 439560063 439560889 0.000000e+00 911.0
12 TraesCS5B01G223000 chr5A 86.456 443 47 5 2 435 439557027 439557465 1.730000e-129 473.0
13 TraesCS5B01G223000 chr5A 78.121 713 102 32 4061 4760 439561162 439561833 2.310000e-108 403.0
14 TraesCS5B01G223000 chr5A 93.636 110 4 3 4783 4889 439563512 439563621 1.530000e-35 161.0
15 TraesCS5B01G223000 chr5A 93.220 59 0 1 4884 4938 439563891 439563949 3.420000e-12 84.2
16 TraesCS5B01G223000 chr7D 92.130 216 17 0 5024 5239 167388596 167388381 6.700000e-79 305.0
17 TraesCS5B01G223000 chr4B 91.818 220 17 1 5020 5239 234685922 234685704 6.700000e-79 305.0
18 TraesCS5B01G223000 chr2D 92.754 207 15 0 5023 5229 122563660 122563866 3.120000e-77 300.0
19 TraesCS5B01G223000 chr6A 88.353 249 28 1 5020 5268 379658400 379658647 1.120000e-76 298.0
20 TraesCS5B01G223000 chr2B 90.826 218 19 1 5023 5239 741946990 741946773 1.880000e-74 291.0
21 TraesCS5B01G223000 chr2B 90.323 217 21 0 5023 5239 4757636 4757420 8.730000e-73 285.0
22 TraesCS5B01G223000 chr6B 90.455 220 20 1 5020 5239 16603614 16603832 6.750000e-74 289.0
23 TraesCS5B01G223000 chr7B 90.000 220 22 0 5020 5239 647818304 647818523 8.730000e-73 285.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G223000 chr5B 397838937 397844259 5322 False 9830.000000 9830 100.000000 1 5323 1 chr5B.!!$F1 5322
1 TraesCS5B01G223000 chr5D 338666466 338671701 5235 False 1291.600000 3504 90.947800 1 5023 5 chr5D.!!$F2 5022
2 TraesCS5B01G223000 chr5D 339006837 339007608 771 False 342.000000 582 88.817000 4354 5320 2 chr5D.!!$F3 966
3 TraesCS5B01G223000 chr5A 439557027 439563949 6922 False 703.533333 2189 87.226667 2 4938 6 chr5A.!!$F1 4936

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
909 1130 0.109342 ACTTGGCCAGAGTGACTTGG 59.891 55.0 16.66 8.75 0.00 3.61 F
1539 1779 0.179032 TATGCCGTGCACCTTATGGG 60.179 55.0 12.15 6.55 43.04 4.00 F
2032 2372 0.312729 TCGTCTCAGCGTGCTGTTAA 59.687 50.0 20.33 5.75 43.96 2.01 F
2033 2373 0.435008 CGTCTCAGCGTGCTGTTAAC 59.565 55.0 20.33 15.06 43.96 2.01 F
3878 4429 0.462759 GGTGAGGATCTTTCCCGCAG 60.463 60.0 0.00 0.00 43.76 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2015 2355 1.784525 AGTTAACAGCACGCTGAGAC 58.215 50.000 25.09 17.72 46.30 3.36 R
3266 3808 1.497161 ACCCCATAAGTCCTCTTCCG 58.503 55.000 0.00 0.00 35.36 4.30 R
3850 4399 0.534412 AGATCCTCACCAGCACTTCG 59.466 55.000 0.00 0.00 0.00 3.79 R
3890 4441 0.676466 GCCATGGTTCCGTGTGATGA 60.676 55.000 14.67 0.00 0.00 2.92 R
5184 7814 1.643286 TGGGCATTTGGGACTTATGGA 59.357 47.619 0.00 0.00 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.160679 AGGGAAACAACAGATCCTTGG 57.839 47.619 5.87 0.00 33.61 3.61
59 68 4.858850 TCCATGATTTGCATAGACAACCT 58.141 39.130 0.00 0.00 34.82 3.50
69 78 8.641499 TTTGCATAGACAACCTTTTTGTAAAG 57.359 30.769 0.00 0.00 40.38 1.85
70 79 7.575414 TGCATAGACAACCTTTTTGTAAAGA 57.425 32.000 0.00 0.00 42.78 2.52
71 80 7.648142 TGCATAGACAACCTTTTTGTAAAGAG 58.352 34.615 0.00 0.00 42.78 2.85
74 83 4.341235 AGACAACCTTTTTGTAAAGAGGGC 59.659 41.667 15.73 5.18 42.81 5.19
75 84 4.027437 ACAACCTTTTTGTAAAGAGGGCA 58.973 39.130 15.73 0.00 42.81 5.36
77 86 4.178956 ACCTTTTTGTAAAGAGGGCAGA 57.821 40.909 15.73 0.00 42.81 4.26
94 104 4.040461 GGGCAGACTGCTATATTAAGACCA 59.960 45.833 25.92 0.00 44.28 4.02
201 220 4.804868 TGCTTTTGGTATTGTGCATCAT 57.195 36.364 0.00 0.00 0.00 2.45
203 222 3.792956 GCTTTTGGTATTGTGCATCATCG 59.207 43.478 0.00 0.00 0.00 3.84
215 234 1.845266 CATCATCGTCGAGTTGGAGG 58.155 55.000 0.00 0.00 0.00 4.30
218 237 1.305046 ATCGTCGAGTTGGAGGGGT 60.305 57.895 0.00 0.00 0.00 4.95
231 250 1.527433 GAGGGGTGAAAGCTGGCAAC 61.527 60.000 0.00 0.00 0.00 4.17
253 272 2.103263 GAGCATCTTCCGACAGGGTTAT 59.897 50.000 0.00 0.00 38.33 1.89
263 282 2.285220 CGACAGGGTTATGAATTCAGCG 59.715 50.000 14.54 3.36 0.00 5.18
266 285 3.009723 CAGGGTTATGAATTCAGCGTGT 58.990 45.455 14.54 0.00 0.00 4.49
313 427 9.717942 AATATATGCCTCTGAATTTGACTACTC 57.282 33.333 0.00 0.00 0.00 2.59
318 432 5.098893 CCTCTGAATTTGACTACTCGACAG 58.901 45.833 0.00 0.00 0.00 3.51
333 447 1.802069 GACAGTGTCAAGAAGCCTCC 58.198 55.000 18.54 0.00 32.09 4.30
334 448 1.070758 GACAGTGTCAAGAAGCCTCCA 59.929 52.381 18.54 0.00 32.09 3.86
341 455 3.196469 TGTCAAGAAGCCTCCATACTCTG 59.804 47.826 0.00 0.00 0.00 3.35
343 457 2.170187 CAAGAAGCCTCCATACTCTGCT 59.830 50.000 0.00 0.00 0.00 4.24
346 460 1.577736 AGCCTCCATACTCTGCTGTT 58.422 50.000 0.00 0.00 0.00 3.16
348 462 3.312890 AGCCTCCATACTCTGCTGTTAT 58.687 45.455 0.00 0.00 0.00 1.89
358 472 3.258372 ACTCTGCTGTTATGAACTTCCGA 59.742 43.478 0.00 0.00 0.00 4.55
374 488 1.227527 CGAATACCGGCTCCATGCA 60.228 57.895 0.00 0.00 45.15 3.96
396 510 1.369689 CGCGCATGCTAAATCCAGC 60.370 57.895 17.13 7.99 42.15 4.85
397 511 1.008079 GCGCATGCTAAATCCAGCC 60.008 57.895 17.13 0.00 41.04 4.85
399 513 0.309922 CGCATGCTAAATCCAGCCAG 59.690 55.000 17.13 0.00 41.04 4.85
400 514 0.672342 GCATGCTAAATCCAGCCAGG 59.328 55.000 11.37 0.00 41.04 4.45
404 518 0.680921 GCTAAATCCAGCCAGGCACA 60.681 55.000 15.80 0.00 35.40 4.57
406 520 0.676466 TAAATCCAGCCAGGCACACG 60.676 55.000 15.80 0.00 37.29 4.49
407 521 2.697147 AAATCCAGCCAGGCACACGT 62.697 55.000 15.80 0.00 37.29 4.49
425 539 5.575606 CACACGTTCGGTTATGTAGAAATCT 59.424 40.000 0.00 0.00 0.00 2.40
455 582 3.134262 GGTTCCTAGACCCATTCTACCAC 59.866 52.174 0.00 0.00 35.55 4.16
457 584 4.280789 TCCTAGACCCATTCTACCACAT 57.719 45.455 0.00 0.00 35.55 3.21
458 585 5.412617 TCCTAGACCCATTCTACCACATA 57.587 43.478 0.00 0.00 35.55 2.29
459 586 5.145564 TCCTAGACCCATTCTACCACATAC 58.854 45.833 0.00 0.00 35.55 2.39
462 592 5.552870 AGACCCATTCTACCACATACATC 57.447 43.478 0.00 0.00 30.17 3.06
475 605 5.428457 ACCACATACATCTCATTTCCTACCA 59.572 40.000 0.00 0.00 0.00 3.25
481 611 1.621317 TCTCATTTCCTACCACACGCA 59.379 47.619 0.00 0.00 0.00 5.24
515 653 1.982226 TCCTCCAGGAAATTCAACGGA 59.018 47.619 0.00 0.00 42.18 4.69
516 654 2.027192 TCCTCCAGGAAATTCAACGGAG 60.027 50.000 14.11 14.11 42.18 4.63
523 661 4.937620 CAGGAAATTCAACGGAGATTCAGA 59.062 41.667 0.00 0.00 0.00 3.27
526 664 5.412904 GGAAATTCAACGGAGATTCAGACTT 59.587 40.000 0.00 0.00 0.00 3.01
528 666 7.281100 GGAAATTCAACGGAGATTCAGACTTAT 59.719 37.037 0.00 0.00 0.00 1.73
529 667 9.314321 GAAATTCAACGGAGATTCAGACTTATA 57.686 33.333 0.00 0.00 0.00 0.98
530 668 9.667107 AAATTCAACGGAGATTCAGACTTATAA 57.333 29.630 0.00 0.00 0.00 0.98
531 669 8.649973 ATTCAACGGAGATTCAGACTTATAAC 57.350 34.615 0.00 0.00 0.00 1.89
532 670 7.406031 TCAACGGAGATTCAGACTTATAACT 57.594 36.000 0.00 0.00 0.00 2.24
533 671 8.515695 TCAACGGAGATTCAGACTTATAACTA 57.484 34.615 0.00 0.00 0.00 2.24
535 673 9.751542 CAACGGAGATTCAGACTTATAACTAAT 57.248 33.333 0.00 0.00 0.00 1.73
536 674 9.968870 AACGGAGATTCAGACTTATAACTAATC 57.031 33.333 0.00 0.00 0.00 1.75
537 675 8.578151 ACGGAGATTCAGACTTATAACTAATCC 58.422 37.037 0.00 0.00 0.00 3.01
546 684 9.680315 CAGACTTATAACTAATCCTAACTTCCG 57.320 37.037 0.00 0.00 0.00 4.30
547 685 9.418839 AGACTTATAACTAATCCTAACTTCCGT 57.581 33.333 0.00 0.00 0.00 4.69
553 691 7.579761 AACTAATCCTAACTTCCGTAGTAGG 57.420 40.000 0.00 0.00 35.54 3.18
554 692 6.904626 ACTAATCCTAACTTCCGTAGTAGGA 58.095 40.000 0.98 0.98 39.16 2.94
555 693 6.997476 ACTAATCCTAACTTCCGTAGTAGGAG 59.003 42.308 4.72 0.00 41.98 3.69
556 694 4.851639 TCCTAACTTCCGTAGTAGGAGT 57.148 45.455 0.00 0.00 41.98 3.85
557 695 5.957771 TCCTAACTTCCGTAGTAGGAGTA 57.042 43.478 0.00 0.00 41.98 2.59
558 696 5.923204 TCCTAACTTCCGTAGTAGGAGTAG 58.077 45.833 0.00 0.00 41.98 2.57
559 697 5.663106 TCCTAACTTCCGTAGTAGGAGTAGA 59.337 44.000 0.00 0.00 41.98 2.59
560 698 6.156949 TCCTAACTTCCGTAGTAGGAGTAGAA 59.843 42.308 0.00 0.00 41.98 2.10
561 699 6.997476 CCTAACTTCCGTAGTAGGAGTAGAAT 59.003 42.308 0.00 0.00 41.98 2.40
562 700 7.501892 CCTAACTTCCGTAGTAGGAGTAGAATT 59.498 40.741 0.00 0.00 41.98 2.17
563 701 6.940831 ACTTCCGTAGTAGGAGTAGAATTC 57.059 41.667 0.00 0.00 41.98 2.17
564 702 6.421485 ACTTCCGTAGTAGGAGTAGAATTCA 58.579 40.000 8.44 0.00 41.98 2.57
565 703 6.888632 ACTTCCGTAGTAGGAGTAGAATTCAA 59.111 38.462 8.44 0.00 41.98 2.69
566 704 7.560626 ACTTCCGTAGTAGGAGTAGAATTCAAT 59.439 37.037 8.44 0.00 41.98 2.57
567 705 7.507733 TCCGTAGTAGGAGTAGAATTCAATC 57.492 40.000 8.44 2.30 34.92 2.67
568 706 6.204301 TCCGTAGTAGGAGTAGAATTCAATCG 59.796 42.308 8.44 0.00 34.92 3.34
569 707 6.204301 CCGTAGTAGGAGTAGAATTCAATCGA 59.796 42.308 8.44 0.00 0.00 3.59
570 708 7.094720 CCGTAGTAGGAGTAGAATTCAATCGAT 60.095 40.741 8.44 0.00 0.00 3.59
571 709 7.958567 CGTAGTAGGAGTAGAATTCAATCGATC 59.041 40.741 8.44 0.00 0.00 3.69
572 710 7.222000 AGTAGGAGTAGAATTCAATCGATCC 57.778 40.000 8.44 6.19 0.00 3.36
573 711 6.778069 AGTAGGAGTAGAATTCAATCGATCCA 59.222 38.462 8.44 0.00 0.00 3.41
574 712 5.848406 AGGAGTAGAATTCAATCGATCCAC 58.152 41.667 8.44 0.00 0.00 4.02
575 713 5.600484 AGGAGTAGAATTCAATCGATCCACT 59.400 40.000 8.44 0.00 0.00 4.00
576 714 6.778069 AGGAGTAGAATTCAATCGATCCACTA 59.222 38.462 8.44 0.00 0.00 2.74
577 715 6.864165 GGAGTAGAATTCAATCGATCCACTAC 59.136 42.308 8.44 7.53 0.00 2.73
578 716 6.750148 AGTAGAATTCAATCGATCCACTACC 58.250 40.000 8.44 0.00 0.00 3.18
579 717 5.878406 AGAATTCAATCGATCCACTACCT 57.122 39.130 8.44 0.00 0.00 3.08
613 752 6.494893 AGCAGTAAAACGCATAAAGAATCA 57.505 33.333 0.00 0.00 0.00 2.57
614 753 7.088589 AGCAGTAAAACGCATAAAGAATCAT 57.911 32.000 0.00 0.00 0.00 2.45
624 763 5.408299 CGCATAAAGAATCATGGATACGGAA 59.592 40.000 0.00 0.00 42.51 4.30
625 764 6.092670 CGCATAAAGAATCATGGATACGGAAT 59.907 38.462 0.00 0.00 42.51 3.01
628 767 3.589988 AGAATCATGGATACGGAATCGC 58.410 45.455 0.00 0.00 40.63 4.58
661 839 1.929836 CGAGCAAGGCTAAGATCACAC 59.070 52.381 0.00 0.00 39.88 3.82
680 900 1.271762 ACCGAGGTACAGACTAGCACA 60.272 52.381 0.00 0.00 0.00 4.57
699 919 4.856801 CTCGGAATGGGCACGGGG 62.857 72.222 0.00 0.00 0.00 5.73
810 1030 2.021355 ATCGCTCTTGCCTTCTGAAG 57.979 50.000 10.46 10.46 35.36 3.02
820 1040 3.420573 TGCCTTCTGAAGGGAAGAGGAG 61.421 54.545 31.72 8.91 46.85 3.69
854 1074 1.830477 CAGAGAGGGTTCTGGAGGAAG 59.170 57.143 0.00 0.00 40.69 3.46
864 1085 0.174617 CTGGAGGAAGAAGACCGCTC 59.825 60.000 0.00 0.00 0.00 5.03
898 1119 1.881925 CGAACCAGAATGACTTGGCCA 60.882 52.381 0.00 0.00 39.69 5.36
899 1120 1.815003 GAACCAGAATGACTTGGCCAG 59.185 52.381 5.11 2.72 39.69 4.85
900 1121 1.067295 ACCAGAATGACTTGGCCAGA 58.933 50.000 5.11 0.00 39.69 3.86
901 1122 1.004044 ACCAGAATGACTTGGCCAGAG 59.996 52.381 5.11 9.46 39.69 3.35
902 1123 1.004044 CCAGAATGACTTGGCCAGAGT 59.996 52.381 17.19 17.19 39.69 3.24
903 1124 2.082231 CAGAATGACTTGGCCAGAGTG 58.918 52.381 20.74 9.70 39.69 3.51
904 1125 1.980765 AGAATGACTTGGCCAGAGTGA 59.019 47.619 20.74 14.95 0.00 3.41
905 1126 2.079925 GAATGACTTGGCCAGAGTGAC 58.920 52.381 20.74 10.86 0.00 3.67
906 1127 1.356124 ATGACTTGGCCAGAGTGACT 58.644 50.000 20.74 0.00 0.00 3.41
907 1128 1.131638 TGACTTGGCCAGAGTGACTT 58.868 50.000 20.74 1.23 0.00 3.01
908 1129 1.202687 TGACTTGGCCAGAGTGACTTG 60.203 52.381 20.74 2.42 0.00 3.16
909 1130 0.109342 ACTTGGCCAGAGTGACTTGG 59.891 55.000 16.66 8.75 0.00 3.61
910 1131 1.228245 TTGGCCAGAGTGACTTGGC 60.228 57.895 22.28 22.28 39.93 4.52
911 1132 2.360475 GGCCAGAGTGACTTGGCC 60.360 66.667 28.91 28.91 46.79 5.36
912 1133 2.753029 GCCAGAGTGACTTGGCCT 59.247 61.111 20.75 0.00 37.07 5.19
987 1208 0.302288 CGCGAGTAGAGACTTCCGAG 59.698 60.000 0.00 0.00 35.45 4.63
988 1209 1.371595 GCGAGTAGAGACTTCCGAGT 58.628 55.000 0.00 0.00 35.45 4.18
989 1210 1.738908 GCGAGTAGAGACTTCCGAGTT 59.261 52.381 0.00 0.00 35.45 3.01
990 1211 2.223089 GCGAGTAGAGACTTCCGAGTTC 60.223 54.545 0.00 0.00 35.45 3.01
991 1212 2.352342 CGAGTAGAGACTTCCGAGTTCC 59.648 54.545 0.00 0.00 35.45 3.62
992 1213 2.352342 GAGTAGAGACTTCCGAGTTCCG 59.648 54.545 0.00 0.00 35.45 4.30
993 1214 2.027377 AGTAGAGACTTCCGAGTTCCGA 60.027 50.000 0.00 0.00 35.88 4.55
1029 1250 0.423544 ATCAGTCCCCCTCTTCCCTT 59.576 55.000 0.00 0.00 0.00 3.95
1268 1500 0.463833 CCAAAACCCTAGCGGCCTAG 60.464 60.000 0.00 0.00 40.64 3.02
1341 1574 0.802494 CTAATCGCGGCTGTTTTGGT 59.198 50.000 6.13 0.00 0.00 3.67
1353 1586 0.242825 GTTTTGGTTCGGCTTAGGGC 59.757 55.000 0.00 0.00 40.90 5.19
1417 1650 1.447838 CGCAAGCTCGGTGGTATGT 60.448 57.895 0.00 0.00 0.00 2.29
1418 1651 0.179121 CGCAAGCTCGGTGGTATGTA 60.179 55.000 0.00 0.00 0.00 2.29
1419 1652 1.538204 CGCAAGCTCGGTGGTATGTAT 60.538 52.381 0.00 0.00 0.00 2.29
1420 1653 1.867233 GCAAGCTCGGTGGTATGTATG 59.133 52.381 0.00 0.00 0.00 2.39
1476 1713 0.941542 TGCGCTTGTTTCCACTGTAC 59.058 50.000 9.73 0.00 0.00 2.90
1499 1736 1.959042 ATGGCTACATGTACTGCTGC 58.041 50.000 14.62 10.36 35.57 5.25
1539 1779 0.179032 TATGCCGTGCACCTTATGGG 60.179 55.000 12.15 6.55 43.04 4.00
1621 1861 4.019174 CAGTAATGGGGATGCAAGAGTTT 58.981 43.478 0.00 0.00 0.00 2.66
1622 1862 4.463891 CAGTAATGGGGATGCAAGAGTTTT 59.536 41.667 0.00 0.00 0.00 2.43
1623 1863 4.706962 AGTAATGGGGATGCAAGAGTTTTC 59.293 41.667 0.00 0.00 0.00 2.29
1624 1864 1.923356 TGGGGATGCAAGAGTTTTCC 58.077 50.000 0.00 0.00 0.00 3.13
1625 1865 1.428912 TGGGGATGCAAGAGTTTTCCT 59.571 47.619 0.00 0.00 0.00 3.36
1650 1890 2.408271 TGAATTGCTTCTCCTGCGAT 57.592 45.000 0.00 0.00 36.20 4.58
1652 1892 2.012673 GAATTGCTTCTCCTGCGATGT 58.987 47.619 0.00 0.00 35.00 3.06
1669 1909 2.566833 TGTTGGTGAGTTCTGGATGG 57.433 50.000 0.00 0.00 0.00 3.51
1696 1936 4.763355 AGGTGGCCCTGATATGAGTTATA 58.237 43.478 0.00 0.00 40.58 0.98
1699 1939 3.844211 TGGCCCTGATATGAGTTATACCC 59.156 47.826 0.00 0.00 0.00 3.69
1709 1949 1.949525 GAGTTATACCCGGCGAGTGTA 59.050 52.381 9.30 0.00 0.00 2.90
1728 2054 6.418101 AGTGTACAGCAAATTGGATATCAGT 58.582 36.000 4.83 0.00 0.00 3.41
1969 2304 0.835971 TGTGGGCTTAGGCTGACTGA 60.836 55.000 5.62 0.00 38.73 3.41
2015 2355 9.503427 TCATCATAGCGTGTATATTCTAAATCG 57.497 33.333 0.00 0.00 0.00 3.34
2029 2369 0.319900 AAATCGTCTCAGCGTGCTGT 60.320 50.000 20.33 0.00 43.96 4.40
2030 2370 0.319900 AATCGTCTCAGCGTGCTGTT 60.320 50.000 20.33 4.70 43.96 3.16
2031 2371 0.526211 ATCGTCTCAGCGTGCTGTTA 59.474 50.000 20.33 8.07 43.96 2.41
2032 2372 0.312729 TCGTCTCAGCGTGCTGTTAA 59.687 50.000 20.33 5.75 43.96 2.01
2033 2373 0.435008 CGTCTCAGCGTGCTGTTAAC 59.565 55.000 20.33 15.06 43.96 2.01
2034 2374 1.784525 GTCTCAGCGTGCTGTTAACT 58.215 50.000 20.33 0.00 43.96 2.24
2035 2375 2.135933 GTCTCAGCGTGCTGTTAACTT 58.864 47.619 20.33 0.00 43.96 2.66
2036 2376 2.544267 GTCTCAGCGTGCTGTTAACTTT 59.456 45.455 20.33 0.00 43.96 2.66
2092 2432 3.215151 CATTGCAGAGCTGAGGAATGAT 58.785 45.455 18.62 0.00 30.97 2.45
2274 2656 4.775236 AGATCTTGGCCAGTTGTATCTTC 58.225 43.478 5.11 0.00 0.00 2.87
2275 2657 4.472833 AGATCTTGGCCAGTTGTATCTTCT 59.527 41.667 5.11 0.00 0.00 2.85
2276 2658 4.207891 TCTTGGCCAGTTGTATCTTCTC 57.792 45.455 5.11 0.00 0.00 2.87
2277 2659 3.582647 TCTTGGCCAGTTGTATCTTCTCA 59.417 43.478 5.11 0.00 0.00 3.27
2278 2660 3.616956 TGGCCAGTTGTATCTTCTCAG 57.383 47.619 0.00 0.00 0.00 3.35
2279 2661 3.173151 TGGCCAGTTGTATCTTCTCAGA 58.827 45.455 0.00 0.00 0.00 3.27
2280 2662 3.776969 TGGCCAGTTGTATCTTCTCAGAT 59.223 43.478 0.00 0.00 42.83 2.90
2281 2663 4.125703 GGCCAGTTGTATCTTCTCAGATG 58.874 47.826 0.00 0.00 40.28 2.90
2282 2664 4.383552 GGCCAGTTGTATCTTCTCAGATGT 60.384 45.833 0.00 0.00 40.28 3.06
2283 2665 5.163405 GGCCAGTTGTATCTTCTCAGATGTA 60.163 44.000 0.00 0.00 40.28 2.29
2284 2666 6.463614 GGCCAGTTGTATCTTCTCAGATGTAT 60.464 42.308 0.00 0.00 40.28 2.29
2285 2667 7.255977 GGCCAGTTGTATCTTCTCAGATGTATA 60.256 40.741 0.00 0.00 40.28 1.47
2286 2668 8.310382 GCCAGTTGTATCTTCTCAGATGTATAT 58.690 37.037 0.00 0.00 40.28 0.86
2294 2676 8.891985 ATCTTCTCAGATGTATATAAGGAGCA 57.108 34.615 0.00 0.00 38.44 4.26
2295 2677 8.116651 TCTTCTCAGATGTATATAAGGAGCAC 57.883 38.462 0.00 0.00 0.00 4.40
2296 2678 7.725844 TCTTCTCAGATGTATATAAGGAGCACA 59.274 37.037 0.00 0.00 0.00 4.57
2297 2679 8.427902 TTCTCAGATGTATATAAGGAGCACAT 57.572 34.615 0.00 0.00 32.70 3.21
2298 2680 7.834803 TCTCAGATGTATATAAGGAGCACATG 58.165 38.462 0.00 0.00 30.25 3.21
2299 2681 7.671398 TCTCAGATGTATATAAGGAGCACATGA 59.329 37.037 0.00 0.00 30.25 3.07
2300 2682 7.606349 TCAGATGTATATAAGGAGCACATGAC 58.394 38.462 0.00 0.00 30.25 3.06
2301 2683 7.233348 TCAGATGTATATAAGGAGCACATGACA 59.767 37.037 0.00 0.00 30.25 3.58
2302 2684 7.874528 CAGATGTATATAAGGAGCACATGACAA 59.125 37.037 0.00 0.00 30.25 3.18
2303 2685 8.600668 AGATGTATATAAGGAGCACATGACAAT 58.399 33.333 0.00 0.00 30.25 2.71
2304 2686 9.875691 GATGTATATAAGGAGCACATGACAATA 57.124 33.333 0.00 0.00 30.25 1.90
2533 2922 8.691661 AATATACCAGGTCAATATTGGTCAAC 57.308 34.615 15.36 6.09 43.82 3.18
2692 3094 8.772705 GCTTTCTTTTATGACATCATCTAGGAG 58.227 37.037 0.00 0.02 37.76 3.69
2745 3147 9.398538 AGTAATTTACACTTGTCCACTAAAACA 57.601 29.630 9.15 0.00 0.00 2.83
2796 3198 5.986501 AACGGTTTAGCATTTTGGGAATA 57.013 34.783 0.00 0.00 0.00 1.75
3266 3808 4.202111 ACAATTACACCAAGAAAGTGGCAC 60.202 41.667 10.29 10.29 43.00 5.01
3317 3859 7.690952 ACTAAAACCTTTGTGTCAAGTGTTA 57.309 32.000 0.00 0.00 0.00 2.41
3319 3861 9.398538 ACTAAAACCTTTGTGTCAAGTGTTATA 57.601 29.630 0.00 0.00 0.00 0.98
3324 3866 8.458573 ACCTTTGTGTCAAGTGTTATATTTCA 57.541 30.769 0.00 0.00 0.00 2.69
3362 3904 9.442047 TCAAGAAGTATCAGATCTTCCTTTTTC 57.558 33.333 14.30 0.00 40.34 2.29
3400 3942 6.097696 ACTGTAAACATGTAGGTTGCCTTTTT 59.902 34.615 0.00 0.00 34.61 1.94
3407 3949 4.274147 TGTAGGTTGCCTTTTTCAACTGA 58.726 39.130 5.94 0.00 42.40 3.41
3414 3956 3.446873 TGCCTTTTTCAACTGAGAAGCAA 59.553 39.130 0.00 0.00 0.00 3.91
3482 4024 6.992063 ACAATAGTGTATTCCTTTGCTCTG 57.008 37.500 0.00 0.00 35.72 3.35
3488 4030 5.098211 GTGTATTCCTTTGCTCTGAAATGC 58.902 41.667 0.00 0.00 0.00 3.56
3498 4040 2.294233 GCTCTGAAATGCCAAGTTGACA 59.706 45.455 3.87 0.00 0.00 3.58
3501 4043 3.256383 TCTGAAATGCCAAGTTGACATGG 59.744 43.478 5.35 1.17 37.74 3.66
3532 4074 5.008217 TGTGACACAACACTACCTAAATTGC 59.992 40.000 5.62 0.00 40.87 3.56
3560 4103 4.540099 TGGATACTTTTGTTGGAGAGGGAT 59.460 41.667 0.00 0.00 37.61 3.85
3582 4127 7.254795 GGGATATGGAGACTTATTGAACAAACG 60.255 40.741 0.00 0.00 31.38 3.60
3585 4130 4.024387 TGGAGACTTATTGAACAAACGCAC 60.024 41.667 0.00 0.00 0.00 5.34
3591 4136 1.018148 TTGAACAAACGCACGATGGT 58.982 45.000 0.00 0.00 0.00 3.55
3678 4227 7.558444 AGAACTACATGTCCTCTTCCTAAGTAG 59.442 40.741 0.00 0.00 34.26 2.57
3736 4285 7.229907 ACAAACACAACCCCTATTTTGTAGTAG 59.770 37.037 0.00 0.00 35.85 2.57
3776 4325 4.424711 GCCCTCAACCCCGATGCA 62.425 66.667 0.00 0.00 0.00 3.96
3813 4362 1.410004 CTCATCGGCAACCCTACCTA 58.590 55.000 0.00 0.00 0.00 3.08
3850 4399 1.264288 GTGTGTAACCAGAAGCAGCAC 59.736 52.381 0.00 0.00 34.36 4.40
3871 4422 2.613977 CGAAGTGCTGGTGAGGATCTTT 60.614 50.000 0.00 0.00 34.92 2.52
3878 4429 0.462759 GGTGAGGATCTTTCCCGCAG 60.463 60.000 0.00 0.00 43.76 5.18
3890 4441 4.164221 TCTTTCCCGCAGATTAGGATTCTT 59.836 41.667 0.00 0.00 0.00 2.52
3909 4460 0.676466 TCATCACACGGAACCATGGC 60.676 55.000 13.04 0.00 0.00 4.40
3926 4477 0.723981 GGCAACAGAGCGAAGATGTC 59.276 55.000 0.00 0.00 34.64 3.06
4015 4592 6.070538 ACCTCTAGCTGACAAACTTATCATGT 60.071 38.462 0.00 0.00 0.00 3.21
4031 4608 9.844790 ACTTATCATGTGTGTTAATGATTTGTG 57.155 29.630 3.69 0.00 39.89 3.33
4035 4612 7.314393 TCATGTGTGTTAATGATTTGTGGATG 58.686 34.615 0.00 0.00 0.00 3.51
4036 4613 6.890979 TGTGTGTTAATGATTTGTGGATGA 57.109 33.333 0.00 0.00 0.00 2.92
4037 4614 7.465353 TGTGTGTTAATGATTTGTGGATGAT 57.535 32.000 0.00 0.00 0.00 2.45
4038 4615 7.314393 TGTGTGTTAATGATTTGTGGATGATG 58.686 34.615 0.00 0.00 0.00 3.07
4039 4616 7.176340 TGTGTGTTAATGATTTGTGGATGATGA 59.824 33.333 0.00 0.00 0.00 2.92
4040 4617 8.192774 GTGTGTTAATGATTTGTGGATGATGAT 58.807 33.333 0.00 0.00 0.00 2.45
4042 4619 9.027129 GTGTTAATGATTTGTGGATGATGATTG 57.973 33.333 0.00 0.00 0.00 2.67
4048 4626 8.578448 TGATTTGTGGATGATGATTGTTTCTA 57.422 30.769 0.00 0.00 0.00 2.10
4121 4700 5.133221 CCATTTCCGAATCTTATGAAGGGT 58.867 41.667 0.00 0.00 0.00 4.34
4124 4705 2.135933 CCGAATCTTATGAAGGGTCGC 58.864 52.381 6.83 0.00 35.36 5.19
4125 4706 1.787155 CGAATCTTATGAAGGGTCGCG 59.213 52.381 0.00 0.00 31.80 5.87
4126 4707 2.135933 GAATCTTATGAAGGGTCGCGG 58.864 52.381 6.13 0.00 0.00 6.46
4128 4709 0.458669 TCTTATGAAGGGTCGCGGTC 59.541 55.000 6.13 0.00 0.00 4.79
4164 4745 1.290955 CGGGGTGCTTTCACGTCTA 59.709 57.895 0.00 0.00 44.03 2.59
4199 4780 1.001517 TCTTGCCGCCCTGCATTTA 60.002 52.632 0.00 0.00 41.70 1.40
4243 4827 6.569179 ACCTGAACGCATGTACTTATTTTT 57.431 33.333 0.00 0.00 0.00 1.94
4324 4908 1.470890 TGCAGGCTTTATTTGGTACGC 59.529 47.619 0.00 0.00 0.00 4.42
4337 4921 0.461516 GGTACGCTACCCTTCTTGCC 60.462 60.000 3.59 0.00 43.18 4.52
4370 4954 5.689819 AGAACAATGTCTATCACGTTTTGC 58.310 37.500 0.00 0.00 31.22 3.68
4385 4969 3.792956 CGTTTTGCCAATGATGATGTAGC 59.207 43.478 0.00 0.00 0.00 3.58
4389 4973 5.402997 TTGCCAATGATGATGTAGCAAAA 57.597 34.783 0.00 0.00 35.95 2.44
4400 4984 4.756642 TGATGTAGCAAAACCTGAAGTCAG 59.243 41.667 1.05 1.05 43.40 3.51
4423 5011 1.270625 TGAAGTTGGATCGTGTGGACC 60.271 52.381 0.00 0.00 0.00 4.46
4456 5044 1.351707 CGCCATCCGTATGTGCAAC 59.648 57.895 0.00 0.00 32.15 4.17
4481 5069 3.775316 TGGGAAGTTCCTATCTGGTCTTC 59.225 47.826 21.25 0.96 41.71 2.87
4553 5173 1.082756 GCGTGTCGGTTGCTTTCTG 60.083 57.895 0.00 0.00 0.00 3.02
4599 5219 2.877168 AGAATGCATCGCTTCCAGAATC 59.123 45.455 0.00 0.00 0.00 2.52
4603 5223 1.869754 GCATCGCTTCCAGAATCGCTA 60.870 52.381 0.00 0.00 30.90 4.26
4615 5235 0.752009 AATCGCTAGACCTCGCCTCA 60.752 55.000 0.00 0.00 0.00 3.86
4625 5245 3.062763 GACCTCGCCTCACATATGAATG 58.937 50.000 10.38 0.00 39.17 2.67
4684 5304 8.588290 TTAGATTGTGGGCTGTTGTTAATTAT 57.412 30.769 0.00 0.00 0.00 1.28
4685 5305 9.688091 TTAGATTGTGGGCTGTTGTTAATTATA 57.312 29.630 0.00 0.00 0.00 0.98
4686 5306 8.588290 AGATTGTGGGCTGTTGTTAATTATAA 57.412 30.769 0.00 0.00 0.00 0.98
4776 5455 5.593095 AGCATGCTATTTGAAGACATGATGT 59.407 36.000 21.21 0.00 40.39 3.06
4781 5460 6.207221 TGCTATTTGAAGACATGATGTTGTGT 59.793 34.615 0.00 0.00 0.00 3.72
4790 5469 2.078849 TGATGTTGTGTAGACCTGCG 57.921 50.000 0.00 0.00 0.00 5.18
4802 7114 6.874664 TGTGTAGACCTGCGATTTATAAACAA 59.125 34.615 0.00 0.00 0.00 2.83
4955 7582 9.975218 AGTGGACAAAGTCTACCAATATTTATT 57.025 29.630 9.58 0.00 43.48 1.40
5023 7653 4.695455 CACCACCTAAACACACATCCTAAG 59.305 45.833 0.00 0.00 0.00 2.18
5024 7654 4.261801 CCACCTAAACACACATCCTAAGG 58.738 47.826 0.00 0.00 0.00 2.69
5025 7655 3.689649 CACCTAAACACACATCCTAAGGC 59.310 47.826 0.00 0.00 0.00 4.35
5026 7656 3.279434 CCTAAACACACATCCTAAGGCC 58.721 50.000 0.00 0.00 0.00 5.19
5027 7657 2.215942 AAACACACATCCTAAGGCCC 57.784 50.000 0.00 0.00 0.00 5.80
5028 7658 1.372501 AACACACATCCTAAGGCCCT 58.627 50.000 0.00 0.00 0.00 5.19
5029 7659 0.620556 ACACACATCCTAAGGCCCTG 59.379 55.000 0.00 0.00 0.00 4.45
5030 7660 0.620556 CACACATCCTAAGGCCCTGT 59.379 55.000 0.00 0.00 0.00 4.00
5031 7661 1.004745 CACACATCCTAAGGCCCTGTT 59.995 52.381 0.00 0.00 0.00 3.16
5032 7662 1.710809 ACACATCCTAAGGCCCTGTTT 59.289 47.619 0.00 0.00 0.00 2.83
5033 7663 2.916934 ACACATCCTAAGGCCCTGTTTA 59.083 45.455 0.00 0.00 0.00 2.01
5034 7664 3.054361 ACACATCCTAAGGCCCTGTTTAG 60.054 47.826 0.00 0.06 0.00 1.85
5035 7665 3.054361 CACATCCTAAGGCCCTGTTTAGT 60.054 47.826 0.00 0.00 0.00 2.24
5036 7666 3.591977 ACATCCTAAGGCCCTGTTTAGTT 59.408 43.478 0.00 0.00 0.00 2.24
5037 7667 3.994931 TCCTAAGGCCCTGTTTAGTTC 57.005 47.619 0.00 0.00 0.00 3.01
5038 7668 3.253220 TCCTAAGGCCCTGTTTAGTTCA 58.747 45.455 0.00 0.00 0.00 3.18
5039 7669 3.850173 TCCTAAGGCCCTGTTTAGTTCAT 59.150 43.478 0.00 0.00 0.00 2.57
5040 7670 5.034200 TCCTAAGGCCCTGTTTAGTTCATA 58.966 41.667 0.00 0.00 0.00 2.15
5041 7671 5.489637 TCCTAAGGCCCTGTTTAGTTCATAA 59.510 40.000 0.00 0.00 0.00 1.90
5042 7672 5.823045 CCTAAGGCCCTGTTTAGTTCATAAG 59.177 44.000 0.00 0.00 0.00 1.73
5043 7673 4.929146 AGGCCCTGTTTAGTTCATAAGT 57.071 40.909 0.00 0.00 0.00 2.24
5044 7674 4.844884 AGGCCCTGTTTAGTTCATAAGTC 58.155 43.478 0.00 0.00 0.00 3.01
5045 7675 4.536489 AGGCCCTGTTTAGTTCATAAGTCT 59.464 41.667 0.00 0.00 0.00 3.24
5046 7676 5.014228 AGGCCCTGTTTAGTTCATAAGTCTT 59.986 40.000 0.00 0.00 0.00 3.01
5047 7677 6.214819 AGGCCCTGTTTAGTTCATAAGTCTTA 59.785 38.462 0.00 0.00 0.00 2.10
5048 7678 6.539103 GGCCCTGTTTAGTTCATAAGTCTTAG 59.461 42.308 0.00 0.00 0.00 2.18
5049 7679 6.539103 GCCCTGTTTAGTTCATAAGTCTTAGG 59.461 42.308 0.00 0.00 0.00 2.69
5050 7680 7.580882 GCCCTGTTTAGTTCATAAGTCTTAGGA 60.581 40.741 2.85 2.85 0.00 2.94
5051 7681 7.764901 CCCTGTTTAGTTCATAAGTCTTAGGAC 59.235 40.741 6.47 0.00 42.41 3.85
5079 7709 3.487120 AGTCCCAACTAAAAAGTCGCT 57.513 42.857 0.00 0.00 32.59 4.93
5080 7710 4.612264 AGTCCCAACTAAAAAGTCGCTA 57.388 40.909 0.00 0.00 32.59 4.26
5081 7711 4.566987 AGTCCCAACTAAAAAGTCGCTAG 58.433 43.478 0.00 0.00 32.59 3.42
5082 7712 4.040095 AGTCCCAACTAAAAAGTCGCTAGT 59.960 41.667 0.00 0.00 32.59 2.57
5083 7713 4.388165 GTCCCAACTAAAAAGTCGCTAGTC 59.612 45.833 0.00 0.00 0.00 2.59
5084 7714 3.683340 CCCAACTAAAAAGTCGCTAGTCC 59.317 47.826 0.00 0.00 0.00 3.85
5085 7715 3.683340 CCAACTAAAAAGTCGCTAGTCCC 59.317 47.826 0.00 0.00 0.00 4.46
5086 7716 4.562963 CCAACTAAAAAGTCGCTAGTCCCT 60.563 45.833 0.00 0.00 0.00 4.20
5087 7717 5.337009 CCAACTAAAAAGTCGCTAGTCCCTA 60.337 44.000 0.00 0.00 0.00 3.53
5088 7718 5.990120 ACTAAAAAGTCGCTAGTCCCTAA 57.010 39.130 0.00 0.00 0.00 2.69
5089 7719 6.350629 ACTAAAAAGTCGCTAGTCCCTAAA 57.649 37.500 0.00 0.00 0.00 1.85
5090 7720 6.762333 ACTAAAAAGTCGCTAGTCCCTAAAA 58.238 36.000 0.00 0.00 0.00 1.52
5091 7721 7.219322 ACTAAAAAGTCGCTAGTCCCTAAAAA 58.781 34.615 0.00 0.00 0.00 1.94
5111 7741 6.605471 AAAAATCCCTATCTGTTTGGTTCC 57.395 37.500 0.00 0.00 0.00 3.62
5112 7742 5.536497 AAATCCCTATCTGTTTGGTTCCT 57.464 39.130 0.00 0.00 0.00 3.36
5113 7743 4.510167 ATCCCTATCTGTTTGGTTCCTG 57.490 45.455 0.00 0.00 0.00 3.86
5114 7744 3.526899 TCCCTATCTGTTTGGTTCCTGA 58.473 45.455 0.00 0.00 0.00 3.86
5115 7745 3.519510 TCCCTATCTGTTTGGTTCCTGAG 59.480 47.826 0.00 0.00 0.00 3.35
5116 7746 3.519510 CCCTATCTGTTTGGTTCCTGAGA 59.480 47.826 0.00 0.00 0.00 3.27
5117 7747 4.383552 CCCTATCTGTTTGGTTCCTGAGAG 60.384 50.000 0.00 0.00 0.00 3.20
5118 7748 4.223923 CCTATCTGTTTGGTTCCTGAGAGT 59.776 45.833 0.00 0.00 0.00 3.24
5119 7749 5.422331 CCTATCTGTTTGGTTCCTGAGAGTA 59.578 44.000 0.00 0.00 0.00 2.59
5120 7750 5.825593 ATCTGTTTGGTTCCTGAGAGTAA 57.174 39.130 0.00 0.00 0.00 2.24
5121 7751 5.623956 TCTGTTTGGTTCCTGAGAGTAAA 57.376 39.130 0.00 0.00 0.00 2.01
5122 7752 5.365619 TCTGTTTGGTTCCTGAGAGTAAAC 58.634 41.667 0.00 0.00 0.00 2.01
5123 7753 5.104693 TCTGTTTGGTTCCTGAGAGTAAACA 60.105 40.000 0.00 0.00 35.85 2.83
5124 7754 5.690865 TGTTTGGTTCCTGAGAGTAAACAT 58.309 37.500 0.00 0.00 33.27 2.71
5125 7755 5.530915 TGTTTGGTTCCTGAGAGTAAACATG 59.469 40.000 0.00 0.00 33.27 3.21
5126 7756 4.286297 TGGTTCCTGAGAGTAAACATGG 57.714 45.455 0.00 0.00 0.00 3.66
5127 7757 3.907474 TGGTTCCTGAGAGTAAACATGGA 59.093 43.478 0.00 0.00 0.00 3.41
5128 7758 4.254492 GGTTCCTGAGAGTAAACATGGAC 58.746 47.826 0.00 0.00 0.00 4.02
5129 7759 4.020128 GGTTCCTGAGAGTAAACATGGACT 60.020 45.833 0.00 0.00 0.00 3.85
5130 7760 5.187186 GGTTCCTGAGAGTAAACATGGACTA 59.813 44.000 0.00 0.00 0.00 2.59
5131 7761 6.295688 GGTTCCTGAGAGTAAACATGGACTAA 60.296 42.308 0.00 0.00 0.00 2.24
5132 7762 6.531503 TCCTGAGAGTAAACATGGACTAAG 57.468 41.667 0.00 0.00 0.00 2.18
5133 7763 6.253758 TCCTGAGAGTAAACATGGACTAAGA 58.746 40.000 0.00 0.00 0.00 2.10
5134 7764 6.378564 TCCTGAGAGTAAACATGGACTAAGAG 59.621 42.308 0.00 0.00 0.00 2.85
5135 7765 6.378564 CCTGAGAGTAAACATGGACTAAGAGA 59.621 42.308 0.00 0.00 0.00 3.10
5136 7766 7.159322 TGAGAGTAAACATGGACTAAGAGAC 57.841 40.000 0.00 0.00 0.00 3.36
5137 7767 6.153000 TGAGAGTAAACATGGACTAAGAGACC 59.847 42.308 0.00 0.00 0.00 3.85
5138 7768 6.017192 AGAGTAAACATGGACTAAGAGACCA 58.983 40.000 0.00 0.22 43.65 4.02
5146 7776 6.620877 ATGGACTAAGAGACCATGTTACAA 57.379 37.500 9.26 0.00 46.27 2.41
5147 7777 5.790593 TGGACTAAGAGACCATGTTACAAC 58.209 41.667 0.00 0.00 35.22 3.32
5148 7778 5.542635 TGGACTAAGAGACCATGTTACAACT 59.457 40.000 0.00 0.00 35.22 3.16
5149 7779 6.722590 TGGACTAAGAGACCATGTTACAACTA 59.277 38.462 0.00 0.00 35.22 2.24
5150 7780 7.233962 TGGACTAAGAGACCATGTTACAACTAA 59.766 37.037 0.00 0.00 35.22 2.24
5151 7781 8.092687 GGACTAAGAGACCATGTTACAACTAAA 58.907 37.037 0.00 0.00 30.29 1.85
5152 7782 9.485206 GACTAAGAGACCATGTTACAACTAAAA 57.515 33.333 0.00 0.00 0.00 1.52
5153 7783 9.490379 ACTAAGAGACCATGTTACAACTAAAAG 57.510 33.333 0.00 0.00 0.00 2.27
5154 7784 9.706691 CTAAGAGACCATGTTACAACTAAAAGA 57.293 33.333 0.00 0.00 0.00 2.52
5155 7785 7.964604 AGAGACCATGTTACAACTAAAAGAC 57.035 36.000 0.00 0.00 0.00 3.01
5156 7786 6.935208 AGAGACCATGTTACAACTAAAAGACC 59.065 38.462 0.00 0.00 0.00 3.85
5157 7787 6.002082 AGACCATGTTACAACTAAAAGACCC 58.998 40.000 0.00 0.00 0.00 4.46
5158 7788 5.697067 ACCATGTTACAACTAAAAGACCCA 58.303 37.500 0.00 0.00 0.00 4.51
5159 7789 6.130569 ACCATGTTACAACTAAAAGACCCAA 58.869 36.000 0.00 0.00 0.00 4.12
5160 7790 6.608002 ACCATGTTACAACTAAAAGACCCAAA 59.392 34.615 0.00 0.00 0.00 3.28
5161 7791 7.124448 ACCATGTTACAACTAAAAGACCCAAAA 59.876 33.333 0.00 0.00 0.00 2.44
5162 7792 7.982354 CCATGTTACAACTAAAAGACCCAAAAA 59.018 33.333 0.00 0.00 0.00 1.94
5163 7793 9.030301 CATGTTACAACTAAAAGACCCAAAAAG 57.970 33.333 0.00 0.00 0.00 2.27
5164 7794 8.350852 TGTTACAACTAAAAGACCCAAAAAGA 57.649 30.769 0.00 0.00 0.00 2.52
5165 7795 8.245491 TGTTACAACTAAAAGACCCAAAAAGAC 58.755 33.333 0.00 0.00 0.00 3.01
5166 7796 8.464404 GTTACAACTAAAAGACCCAAAAAGACT 58.536 33.333 0.00 0.00 0.00 3.24
5167 7797 7.476540 ACAACTAAAAGACCCAAAAAGACTT 57.523 32.000 0.00 0.00 0.00 3.01
5168 7798 7.903145 ACAACTAAAAGACCCAAAAAGACTTT 58.097 30.769 0.00 0.00 33.18 2.66
5169 7799 8.033038 ACAACTAAAAGACCCAAAAAGACTTTC 58.967 33.333 0.00 0.00 31.73 2.62
5170 7800 7.108841 ACTAAAAGACCCAAAAAGACTTTCC 57.891 36.000 0.00 0.00 31.73 3.13
5171 7801 4.649088 AAAGACCCAAAAAGACTTTCCG 57.351 40.909 0.00 0.00 0.00 4.30
5172 7802 3.292492 AGACCCAAAAAGACTTTCCGT 57.708 42.857 0.00 0.00 0.00 4.69
5173 7803 3.211865 AGACCCAAAAAGACTTTCCGTC 58.788 45.455 0.00 5.03 43.17 4.79
5174 7804 2.946990 GACCCAAAAAGACTTTCCGTCA 59.053 45.455 0.00 0.00 45.32 4.35
5175 7805 2.949644 ACCCAAAAAGACTTTCCGTCAG 59.050 45.455 0.00 0.00 45.32 3.51
5176 7806 2.293399 CCCAAAAAGACTTTCCGTCAGG 59.707 50.000 0.00 0.00 45.32 3.86
5177 7807 2.293399 CCAAAAAGACTTTCCGTCAGGG 59.707 50.000 0.00 0.00 45.32 4.45
5178 7808 2.949644 CAAAAAGACTTTCCGTCAGGGT 59.050 45.455 0.00 0.00 45.32 4.34
5179 7809 2.545537 AAAGACTTTCCGTCAGGGTC 57.454 50.000 0.00 0.00 45.32 4.46
5180 7810 1.718280 AAGACTTTCCGTCAGGGTCT 58.282 50.000 0.00 0.00 45.32 3.85
5181 7811 1.718280 AGACTTTCCGTCAGGGTCTT 58.282 50.000 0.00 0.00 45.32 3.01
5182 7812 2.885616 AGACTTTCCGTCAGGGTCTTA 58.114 47.619 0.00 0.00 45.32 2.10
5183 7813 3.442076 AGACTTTCCGTCAGGGTCTTAT 58.558 45.455 0.00 0.00 45.32 1.73
5184 7814 3.838903 AGACTTTCCGTCAGGGTCTTATT 59.161 43.478 0.00 0.00 45.32 1.40
5185 7815 4.081586 AGACTTTCCGTCAGGGTCTTATTC 60.082 45.833 0.00 0.00 45.32 1.75
5186 7816 3.055312 ACTTTCCGTCAGGGTCTTATTCC 60.055 47.826 0.00 0.00 38.33 3.01
5187 7817 2.241281 TCCGTCAGGGTCTTATTCCA 57.759 50.000 0.00 0.00 38.33 3.53
5188 7818 2.759355 TCCGTCAGGGTCTTATTCCAT 58.241 47.619 0.00 0.00 38.33 3.41
5189 7819 3.918566 TCCGTCAGGGTCTTATTCCATA 58.081 45.455 0.00 0.00 38.33 2.74
5190 7820 4.291792 TCCGTCAGGGTCTTATTCCATAA 58.708 43.478 0.00 0.00 38.33 1.90
5191 7821 4.344102 TCCGTCAGGGTCTTATTCCATAAG 59.656 45.833 0.00 0.00 39.80 1.73
5192 7822 4.101119 CCGTCAGGGTCTTATTCCATAAGT 59.899 45.833 3.93 0.00 42.21 2.24
5193 7823 5.290386 CGTCAGGGTCTTATTCCATAAGTC 58.710 45.833 3.93 0.00 42.21 3.01
5194 7824 5.612351 GTCAGGGTCTTATTCCATAAGTCC 58.388 45.833 9.90 9.90 44.83 3.85
5200 7830 7.277174 GGTCTTATTCCATAAGTCCCAAATG 57.723 40.000 8.00 0.00 41.90 2.32
5201 7831 6.239036 GGTCTTATTCCATAAGTCCCAAATGC 60.239 42.308 8.00 0.00 41.90 3.56
5202 7832 5.833131 TCTTATTCCATAAGTCCCAAATGCC 59.167 40.000 3.93 0.00 42.21 4.40
5203 7833 2.452600 TCCATAAGTCCCAAATGCCC 57.547 50.000 0.00 0.00 0.00 5.36
5204 7834 1.643286 TCCATAAGTCCCAAATGCCCA 59.357 47.619 0.00 0.00 0.00 5.36
5205 7835 1.756538 CCATAAGTCCCAAATGCCCAC 59.243 52.381 0.00 0.00 0.00 4.61
5206 7836 2.624029 CCATAAGTCCCAAATGCCCACT 60.624 50.000 0.00 0.00 0.00 4.00
5207 7837 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
5208 7838 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
5209 7839 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
5210 7840 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
5211 7841 3.165071 AGTCCCAAATGCCCACTTTAAG 58.835 45.455 0.00 0.00 0.00 1.85
5212 7842 2.897326 GTCCCAAATGCCCACTTTAAGT 59.103 45.455 0.00 0.00 0.00 2.24
5213 7843 3.056821 GTCCCAAATGCCCACTTTAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
5214 7844 2.233676 CCCAAATGCCCACTTTAAGTCC 59.766 50.000 0.00 0.00 0.00 3.85
5215 7845 3.165071 CCAAATGCCCACTTTAAGTCCT 58.835 45.455 0.00 0.00 0.00 3.85
5216 7846 3.578282 CCAAATGCCCACTTTAAGTCCTT 59.422 43.478 0.00 0.00 0.00 3.36
5217 7847 4.770010 CCAAATGCCCACTTTAAGTCCTTA 59.230 41.667 0.00 0.00 0.00 2.69
5218 7848 5.422012 CCAAATGCCCACTTTAAGTCCTTAT 59.578 40.000 0.00 0.00 0.00 1.73
5219 7849 6.605594 CCAAATGCCCACTTTAAGTCCTTATA 59.394 38.462 0.00 0.00 0.00 0.98
5220 7850 7.123547 CCAAATGCCCACTTTAAGTCCTTATAA 59.876 37.037 0.00 0.00 0.00 0.98
5221 7851 7.881775 AATGCCCACTTTAAGTCCTTATAAG 57.118 36.000 5.43 5.43 0.00 1.73
5222 7852 6.382919 TGCCCACTTTAAGTCCTTATAAGT 57.617 37.500 11.50 0.00 32.26 2.24
5223 7853 6.412214 TGCCCACTTTAAGTCCTTATAAGTC 58.588 40.000 11.50 4.58 31.03 3.01
5224 7854 5.821470 GCCCACTTTAAGTCCTTATAAGTCC 59.179 44.000 11.50 1.62 31.03 3.85
5225 7855 6.354938 CCCACTTTAAGTCCTTATAAGTCCC 58.645 44.000 11.50 0.00 31.03 4.46
5226 7856 6.158169 CCCACTTTAAGTCCTTATAAGTCCCT 59.842 42.308 11.50 1.51 31.03 4.20
5227 7857 7.273712 CCACTTTAAGTCCTTATAAGTCCCTC 58.726 42.308 11.50 0.00 31.03 4.30
5228 7858 7.273712 CACTTTAAGTCCTTATAAGTCCCTCC 58.726 42.308 11.50 0.00 31.03 4.30
5229 7859 7.125963 CACTTTAAGTCCTTATAAGTCCCTCCT 59.874 40.741 11.50 0.00 31.03 3.69
5230 7860 7.125963 ACTTTAAGTCCTTATAAGTCCCTCCTG 59.874 40.741 11.50 0.00 29.26 3.86
5231 7861 4.628661 AGTCCTTATAAGTCCCTCCTGT 57.371 45.455 11.50 0.00 0.00 4.00
5232 7862 4.961585 AGTCCTTATAAGTCCCTCCTGTT 58.038 43.478 11.50 0.00 0.00 3.16
5233 7863 5.351405 AGTCCTTATAAGTCCCTCCTGTTT 58.649 41.667 11.50 0.00 0.00 2.83
5234 7864 5.189934 AGTCCTTATAAGTCCCTCCTGTTTG 59.810 44.000 11.50 0.00 0.00 2.93
5235 7865 4.473559 TCCTTATAAGTCCCTCCTGTTTGG 59.526 45.833 11.50 0.00 37.10 3.28
5236 7866 4.227527 CCTTATAAGTCCCTCCTGTTTGGT 59.772 45.833 11.50 0.00 37.07 3.67
5237 7867 5.281037 CCTTATAAGTCCCTCCTGTTTGGTT 60.281 44.000 11.50 0.00 37.07 3.67
5238 7868 4.741928 ATAAGTCCCTCCTGTTTGGTTT 57.258 40.909 0.00 0.00 37.07 3.27
5239 7869 3.398318 AAGTCCCTCCTGTTTGGTTTT 57.602 42.857 0.00 0.00 37.07 2.43
5240 7870 4.529716 AAGTCCCTCCTGTTTGGTTTTA 57.470 40.909 0.00 0.00 37.07 1.52
5241 7871 4.529716 AGTCCCTCCTGTTTGGTTTTAA 57.470 40.909 0.00 0.00 37.07 1.52
5242 7872 4.470602 AGTCCCTCCTGTTTGGTTTTAAG 58.529 43.478 0.00 0.00 37.07 1.85
5243 7873 4.079385 AGTCCCTCCTGTTTGGTTTTAAGT 60.079 41.667 0.00 0.00 37.07 2.24
5244 7874 4.277672 GTCCCTCCTGTTTGGTTTTAAGTC 59.722 45.833 0.00 0.00 37.07 3.01
5245 7875 3.572682 CCCTCCTGTTTGGTTTTAAGTCC 59.427 47.826 0.00 0.00 37.07 3.85
5246 7876 3.572682 CCTCCTGTTTGGTTTTAAGTCCC 59.427 47.826 0.00 0.00 37.07 4.46
5247 7877 4.470602 CTCCTGTTTGGTTTTAAGTCCCT 58.529 43.478 0.00 0.00 37.07 4.20
5248 7878 4.211920 TCCTGTTTGGTTTTAAGTCCCTG 58.788 43.478 0.00 0.00 37.07 4.45
5249 7879 3.958147 CCTGTTTGGTTTTAAGTCCCTGT 59.042 43.478 0.00 0.00 0.00 4.00
5250 7880 5.104024 TCCTGTTTGGTTTTAAGTCCCTGTA 60.104 40.000 0.00 0.00 37.07 2.74
5251 7881 5.595133 CCTGTTTGGTTTTAAGTCCCTGTAA 59.405 40.000 0.00 0.00 0.00 2.41
5252 7882 6.097129 CCTGTTTGGTTTTAAGTCCCTGTAAA 59.903 38.462 0.00 0.00 0.00 2.01
5253 7883 6.865411 TGTTTGGTTTTAAGTCCCTGTAAAC 58.135 36.000 0.00 0.00 0.00 2.01
5254 7884 6.436532 TGTTTGGTTTTAAGTCCCTGTAAACA 59.563 34.615 0.00 0.00 33.51 2.83
5255 7885 7.039223 TGTTTGGTTTTAAGTCCCTGTAAACAA 60.039 33.333 0.00 0.00 33.14 2.83
5256 7886 7.477945 TTGGTTTTAAGTCCCTGTAAACAAA 57.522 32.000 0.00 0.00 31.96 2.83
5257 7887 6.865411 TGGTTTTAAGTCCCTGTAAACAAAC 58.135 36.000 0.00 0.00 31.96 2.93
5258 7888 6.436532 TGGTTTTAAGTCCCTGTAAACAAACA 59.563 34.615 0.00 0.00 31.96 2.83
5259 7889 7.124448 TGGTTTTAAGTCCCTGTAAACAAACAT 59.876 33.333 0.00 0.00 31.96 2.71
5260 7890 7.650504 GGTTTTAAGTCCCTGTAAACAAACATC 59.349 37.037 0.00 0.00 31.96 3.06
5261 7891 6.887626 TTAAGTCCCTGTAAACAAACATCC 57.112 37.500 0.00 0.00 0.00 3.51
5262 7892 4.447138 AGTCCCTGTAAACAAACATCCA 57.553 40.909 0.00 0.00 0.00 3.41
5286 7916 7.097192 CACTAATATATGCACCACCGATTAGT 58.903 38.462 0.00 0.65 38.52 2.24
5320 7950 5.187772 ACTTCTGTACTTAGCCACATGATGA 59.812 40.000 0.00 0.00 0.00 2.92
5321 7951 5.876651 TCTGTACTTAGCCACATGATGAT 57.123 39.130 0.00 0.00 0.00 2.45
5322 7952 5.604565 TCTGTACTTAGCCACATGATGATG 58.395 41.667 0.00 0.00 35.49 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 5.343249 GTTGTCTATGCAAATCATGGAACC 58.657 41.667 0.00 0.00 43.06 3.62
59 68 3.317993 GCAGTCTGCCCTCTTTACAAAAA 59.682 43.478 14.27 0.00 37.42 1.94
69 78 5.474825 GTCTTAATATAGCAGTCTGCCCTC 58.525 45.833 21.32 0.00 46.52 4.30
70 79 4.284746 GGTCTTAATATAGCAGTCTGCCCT 59.715 45.833 21.32 11.23 46.52 5.19
71 80 4.040461 TGGTCTTAATATAGCAGTCTGCCC 59.960 45.833 21.32 11.26 46.52 5.36
121 131 5.295950 CCTAGACATTTGCTGTAGATCCTG 58.704 45.833 0.00 0.00 38.54 3.86
185 204 2.607180 CGACGATGATGCACAATACCAA 59.393 45.455 0.00 0.00 0.00 3.67
201 220 2.116772 ACCCCTCCAACTCGACGA 59.883 61.111 0.00 0.00 0.00 4.20
203 222 0.395312 TTTCACCCCTCCAACTCGAC 59.605 55.000 0.00 0.00 0.00 4.20
215 234 1.856265 CTCGTTGCCAGCTTTCACCC 61.856 60.000 0.00 0.00 0.00 4.61
218 237 0.890542 ATGCTCGTTGCCAGCTTTCA 60.891 50.000 0.00 0.00 42.00 2.69
231 250 1.227089 CCCTGTCGGAAGATGCTCG 60.227 63.158 0.00 0.00 45.19 5.03
313 427 1.423395 GAGGCTTCTTGACACTGTCG 58.577 55.000 4.71 0.00 34.95 4.35
318 432 3.196685 AGAGTATGGAGGCTTCTTGACAC 59.803 47.826 0.00 0.00 0.00 3.67
333 447 5.233050 CGGAAGTTCATAACAGCAGAGTATG 59.767 44.000 5.01 0.00 0.00 2.39
334 448 5.127194 TCGGAAGTTCATAACAGCAGAGTAT 59.873 40.000 5.01 0.00 0.00 2.12
341 455 4.025979 CGGTATTCGGAAGTTCATAACAGC 60.026 45.833 5.01 0.00 34.75 4.40
358 472 1.956477 GAATTGCATGGAGCCGGTATT 59.044 47.619 1.90 0.00 44.83 1.89
374 488 1.675483 TGGATTTAGCATGCGCGAATT 59.325 42.857 12.10 4.73 45.49 2.17
386 500 1.098050 GTGTGCCTGGCTGGATTTAG 58.902 55.000 21.03 0.00 38.35 1.85
396 510 0.672401 ATAACCGAACGTGTGCCTGG 60.672 55.000 0.00 0.00 0.00 4.45
397 511 0.442310 CATAACCGAACGTGTGCCTG 59.558 55.000 0.00 0.00 0.00 4.85
399 513 1.657094 CTACATAACCGAACGTGTGCC 59.343 52.381 0.00 0.00 0.00 5.01
400 514 2.598589 TCTACATAACCGAACGTGTGC 58.401 47.619 0.00 0.00 0.00 4.57
404 518 5.107133 CCAGATTTCTACATAACCGAACGT 58.893 41.667 0.00 0.00 0.00 3.99
406 520 4.873827 TGCCAGATTTCTACATAACCGAAC 59.126 41.667 0.00 0.00 0.00 3.95
407 521 5.092554 TGCCAGATTTCTACATAACCGAA 57.907 39.130 0.00 0.00 0.00 4.30
425 539 1.205460 GGTCTAGGAACCCCTTGCCA 61.205 60.000 0.00 0.00 40.78 4.92
447 574 7.437713 AGGAAATGAGATGTATGTGGTAGAA 57.562 36.000 0.00 0.00 0.00 2.10
448 575 7.015292 GGTAGGAAATGAGATGTATGTGGTAGA 59.985 40.741 0.00 0.00 0.00 2.59
452 579 5.760253 GTGGTAGGAAATGAGATGTATGTGG 59.240 44.000 0.00 0.00 0.00 4.17
453 580 6.258727 GTGTGGTAGGAAATGAGATGTATGTG 59.741 42.308 0.00 0.00 0.00 3.21
455 582 5.463392 CGTGTGGTAGGAAATGAGATGTATG 59.537 44.000 0.00 0.00 0.00 2.39
457 584 4.679639 GCGTGTGGTAGGAAATGAGATGTA 60.680 45.833 0.00 0.00 0.00 2.29
458 585 3.861840 CGTGTGGTAGGAAATGAGATGT 58.138 45.455 0.00 0.00 0.00 3.06
459 586 2.609459 GCGTGTGGTAGGAAATGAGATG 59.391 50.000 0.00 0.00 0.00 2.90
462 592 2.002586 CTGCGTGTGGTAGGAAATGAG 58.997 52.381 0.00 0.00 0.00 2.90
494 632 2.027192 TCCGTTGAATTTCCTGGAGGAG 60.027 50.000 0.00 0.00 46.36 3.69
498 636 4.261801 GAATCTCCGTTGAATTTCCTGGA 58.738 43.478 0.00 0.00 0.00 3.86
501 639 4.938226 GTCTGAATCTCCGTTGAATTTCCT 59.062 41.667 0.00 0.00 0.00 3.36
502 640 4.938226 AGTCTGAATCTCCGTTGAATTTCC 59.062 41.667 0.00 0.00 0.00 3.13
503 641 6.487689 AAGTCTGAATCTCCGTTGAATTTC 57.512 37.500 0.00 0.00 0.00 2.17
504 642 9.667107 TTATAAGTCTGAATCTCCGTTGAATTT 57.333 29.630 0.00 0.00 0.00 1.82
507 645 7.837863 AGTTATAAGTCTGAATCTCCGTTGAA 58.162 34.615 0.00 0.00 0.00 2.69
528 666 8.494433 TCCTACTACGGAAGTTAGGATTAGTTA 58.506 37.037 11.09 0.00 46.40 2.24
529 667 7.349598 TCCTACTACGGAAGTTAGGATTAGTT 58.650 38.462 11.09 0.00 46.40 2.24
530 668 6.904626 TCCTACTACGGAAGTTAGGATTAGT 58.095 40.000 11.09 0.00 46.40 2.24
531 669 6.997476 ACTCCTACTACGGAAGTTAGGATTAG 59.003 42.308 13.54 8.63 46.40 1.73
532 670 6.904626 ACTCCTACTACGGAAGTTAGGATTA 58.095 40.000 13.54 1.08 46.40 1.75
533 671 5.764432 ACTCCTACTACGGAAGTTAGGATT 58.236 41.667 13.54 8.97 46.40 3.01
535 673 4.851639 ACTCCTACTACGGAAGTTAGGA 57.148 45.455 12.97 12.97 46.40 2.94
536 674 5.923204 TCTACTCCTACTACGGAAGTTAGG 58.077 45.833 0.00 4.37 46.40 2.69
537 675 8.449251 AATTCTACTCCTACTACGGAAGTTAG 57.551 38.462 0.00 0.00 46.40 2.34
542 680 7.255035 CGATTGAATTCTACTCCTACTACGGAA 60.255 40.741 7.05 0.00 31.44 4.30
543 681 6.204301 CGATTGAATTCTACTCCTACTACGGA 59.796 42.308 7.05 0.00 0.00 4.69
545 683 7.187244 TCGATTGAATTCTACTCCTACTACG 57.813 40.000 7.05 0.00 0.00 3.51
546 684 8.238631 GGATCGATTGAATTCTACTCCTACTAC 58.761 40.741 7.05 0.00 0.00 2.73
547 685 7.942894 TGGATCGATTGAATTCTACTCCTACTA 59.057 37.037 7.05 0.00 0.00 1.82
548 686 6.778069 TGGATCGATTGAATTCTACTCCTACT 59.222 38.462 7.05 0.00 0.00 2.57
549 687 6.864165 GTGGATCGATTGAATTCTACTCCTAC 59.136 42.308 7.05 3.13 0.00 3.18
550 688 6.778069 AGTGGATCGATTGAATTCTACTCCTA 59.222 38.462 7.05 0.00 0.00 2.94
551 689 5.600484 AGTGGATCGATTGAATTCTACTCCT 59.400 40.000 7.05 0.00 0.00 3.69
552 690 5.848406 AGTGGATCGATTGAATTCTACTCC 58.152 41.667 7.05 5.15 0.00 3.85
553 691 6.864165 GGTAGTGGATCGATTGAATTCTACTC 59.136 42.308 7.05 0.24 30.48 2.59
554 692 6.551601 AGGTAGTGGATCGATTGAATTCTACT 59.448 38.462 7.05 2.40 32.03 2.57
555 693 6.750148 AGGTAGTGGATCGATTGAATTCTAC 58.250 40.000 7.05 7.32 0.00 2.59
556 694 6.978674 AGGTAGTGGATCGATTGAATTCTA 57.021 37.500 7.05 0.00 0.00 2.10
557 695 5.878406 AGGTAGTGGATCGATTGAATTCT 57.122 39.130 7.05 0.00 0.00 2.40
558 696 6.984474 TGTTAGGTAGTGGATCGATTGAATTC 59.016 38.462 0.00 0.00 0.00 2.17
559 697 6.884832 TGTTAGGTAGTGGATCGATTGAATT 58.115 36.000 0.00 0.00 0.00 2.17
560 698 6.479972 TGTTAGGTAGTGGATCGATTGAAT 57.520 37.500 0.00 0.00 0.00 2.57
561 699 5.681437 GCTGTTAGGTAGTGGATCGATTGAA 60.681 44.000 0.00 0.00 0.00 2.69
562 700 4.202121 GCTGTTAGGTAGTGGATCGATTGA 60.202 45.833 0.00 0.00 0.00 2.57
563 701 4.051922 GCTGTTAGGTAGTGGATCGATTG 58.948 47.826 0.00 0.00 0.00 2.67
564 702 3.704566 TGCTGTTAGGTAGTGGATCGATT 59.295 43.478 0.00 0.00 0.00 3.34
565 703 3.296854 TGCTGTTAGGTAGTGGATCGAT 58.703 45.455 0.00 0.00 0.00 3.59
566 704 2.688446 CTGCTGTTAGGTAGTGGATCGA 59.312 50.000 0.00 0.00 0.00 3.59
567 705 2.223829 CCTGCTGTTAGGTAGTGGATCG 60.224 54.545 0.00 0.00 32.99 3.69
568 706 3.031736 TCCTGCTGTTAGGTAGTGGATC 58.968 50.000 0.00 0.00 38.99 3.36
569 707 3.116096 TCCTGCTGTTAGGTAGTGGAT 57.884 47.619 0.00 0.00 38.99 3.41
570 708 2.615986 TCCTGCTGTTAGGTAGTGGA 57.384 50.000 0.00 0.00 38.99 4.02
571 709 2.678190 GCTTCCTGCTGTTAGGTAGTGG 60.678 54.545 0.00 0.00 37.51 4.00
572 710 2.028112 TGCTTCCTGCTGTTAGGTAGTG 60.028 50.000 0.00 0.00 43.37 2.74
573 711 2.234908 CTGCTTCCTGCTGTTAGGTAGT 59.765 50.000 0.00 0.00 43.37 2.73
574 712 2.898705 CTGCTTCCTGCTGTTAGGTAG 58.101 52.381 0.00 0.00 43.37 3.18
576 714 3.944476 CTGCTTCCTGCTGTTAGGT 57.056 52.632 0.00 0.00 43.37 3.08
613 752 0.320771 GCTGGCGATTCCGTATCCAT 60.321 55.000 0.00 0.00 37.80 3.41
614 753 1.069090 GCTGGCGATTCCGTATCCA 59.931 57.895 0.00 0.00 37.80 3.41
624 763 3.518003 GCCTTTGATGCTGGCGAT 58.482 55.556 0.00 0.00 37.11 4.58
628 767 1.588824 TTGCTCGCCTTTGATGCTGG 61.589 55.000 0.00 0.00 0.00 4.85
661 839 1.460504 TGTGCTAGTCTGTACCTCGG 58.539 55.000 0.00 0.00 0.00 4.63
680 900 2.505982 CCGTGCCCATTCCGAGAT 59.494 61.111 0.00 0.00 0.00 2.75
773 993 2.624674 ATTTTGGATCCGGGGCCTCG 62.625 60.000 21.16 21.16 0.00 4.63
837 1057 2.112691 TCTTCTTCCTCCAGAACCCTCT 59.887 50.000 0.00 0.00 0.00 3.69
838 1058 2.235155 GTCTTCTTCCTCCAGAACCCTC 59.765 54.545 0.00 0.00 0.00 4.30
854 1074 4.117661 ACGGAGCGAGCGGTCTTC 62.118 66.667 19.54 9.92 41.80 2.87
864 1085 2.087009 GTTCGGTTCAGACGGAGCG 61.087 63.158 0.00 0.00 36.61 5.03
898 1119 1.536943 GGACGAGGCCAAGTCACTCT 61.537 60.000 25.35 0.00 39.01 3.24
899 1120 1.079750 GGACGAGGCCAAGTCACTC 60.080 63.158 25.35 10.11 39.01 3.51
900 1121 2.932234 CGGACGAGGCCAAGTCACT 61.932 63.158 25.35 0.00 39.01 3.41
901 1122 2.227089 ATCGGACGAGGCCAAGTCAC 62.227 60.000 25.35 16.32 39.01 3.67
902 1123 1.945354 GATCGGACGAGGCCAAGTCA 61.945 60.000 25.35 11.53 39.01 3.41
903 1124 1.227002 GATCGGACGAGGCCAAGTC 60.227 63.158 18.83 18.83 36.70 3.01
904 1125 2.893398 GATCGGACGAGGCCAAGT 59.107 61.111 5.01 3.59 0.00 3.16
905 1126 2.278857 CGATCGGACGAGGCCAAG 60.279 66.667 7.38 0.00 35.09 3.61
906 1127 4.508128 GCGATCGGACGAGGCCAA 62.508 66.667 18.30 0.00 35.09 4.52
910 1131 4.609247 GGTCGCGATCGGACGAGG 62.609 72.222 14.06 0.00 39.30 4.63
911 1132 4.939915 CGGTCGCGATCGGACGAG 62.940 72.222 33.02 14.51 39.30 4.18
1268 1500 3.644399 GAGGACAACGCCTCGGGTC 62.644 68.421 0.00 5.23 44.52 4.46
1297 1529 4.482952 ACTATAAACCGTCCAAGGAAGG 57.517 45.455 17.90 17.90 46.70 3.46
1341 1574 2.676265 GGGGAAGCCCTAAGCCGAA 61.676 63.158 2.01 0.00 44.66 4.30
1353 1586 3.406595 GATGTCCGCCCTGGGGAAG 62.407 68.421 16.03 2.35 45.99 3.46
1476 1713 4.053983 CAGCAGTACATGTAGCCATACAG 58.946 47.826 5.62 0.00 44.90 2.74
1499 1736 2.426752 CAAAACAACGAGGCGCGG 60.427 61.111 16.41 0.00 46.49 6.46
1505 1742 2.664424 CGGCATACACCAAAACAACGAG 60.664 50.000 0.00 0.00 0.00 4.18
1539 1779 1.103398 CCCGGACCATGAATGAAGCC 61.103 60.000 0.73 0.00 0.00 4.35
1543 1783 3.650461 TCATAATCCCGGACCATGAATGA 59.350 43.478 0.73 3.01 0.00 2.57
1597 1837 2.173356 CTCTTGCATCCCCATTACTGGA 59.827 50.000 0.00 0.00 46.37 3.86
1621 1861 5.003804 GGAGAAGCAATTCAACTACAGGAA 58.996 41.667 0.00 0.00 0.00 3.36
1622 1862 4.287067 AGGAGAAGCAATTCAACTACAGGA 59.713 41.667 0.00 0.00 0.00 3.86
1623 1863 4.394300 CAGGAGAAGCAATTCAACTACAGG 59.606 45.833 0.00 0.00 0.00 4.00
1624 1864 4.142730 GCAGGAGAAGCAATTCAACTACAG 60.143 45.833 0.00 0.00 0.00 2.74
1625 1865 3.753272 GCAGGAGAAGCAATTCAACTACA 59.247 43.478 0.00 0.00 0.00 2.74
1650 1890 1.774254 ACCATCCAGAACTCACCAACA 59.226 47.619 0.00 0.00 0.00 3.33
1652 1892 1.073763 CCACCATCCAGAACTCACCAA 59.926 52.381 0.00 0.00 0.00 3.67
1669 1909 1.062488 ATATCAGGGCCACCTCCCAC 61.062 60.000 6.18 0.00 46.95 4.61
1696 1936 4.065281 GCTGTACACTCGCCGGGT 62.065 66.667 2.18 0.00 0.00 5.28
1699 1939 0.796312 AATTTGCTGTACACTCGCCG 59.204 50.000 3.40 0.00 0.00 6.46
1709 1949 4.018490 TGCACTGATATCCAATTTGCTGT 58.982 39.130 0.00 0.00 0.00 4.40
1829 2155 2.554344 GCAAACCCTGTTCAGGTCCATA 60.554 50.000 16.33 0.00 36.27 2.74
1830 2156 1.823250 GCAAACCCTGTTCAGGTCCAT 60.823 52.381 16.33 0.00 36.27 3.41
2015 2355 1.784525 AGTTAACAGCACGCTGAGAC 58.215 50.000 25.09 17.72 46.30 3.36
2092 2432 8.253810 TCAATTTTGTTTGTAACATCCTTGTGA 58.746 29.630 0.00 0.00 41.79 3.58
2274 2656 7.758980 GTCATGTGCTCCTTATATACATCTGAG 59.241 40.741 0.00 0.00 30.15 3.35
2275 2657 7.233348 TGTCATGTGCTCCTTATATACATCTGA 59.767 37.037 0.00 0.00 30.15 3.27
2276 2658 7.381323 TGTCATGTGCTCCTTATATACATCTG 58.619 38.462 0.00 0.00 30.15 2.90
2277 2659 7.544804 TGTCATGTGCTCCTTATATACATCT 57.455 36.000 0.00 0.00 30.15 2.90
2278 2660 8.783833 ATTGTCATGTGCTCCTTATATACATC 57.216 34.615 0.00 0.00 30.15 3.06
2515 2904 5.049060 TGAAACGTTGACCAATATTGACCTG 60.049 40.000 17.23 2.57 0.00 4.00
2518 2907 6.362283 CCTTTGAAACGTTGACCAATATTGAC 59.638 38.462 17.23 10.64 0.00 3.18
2533 2922 4.466828 CATGTAGTCAAGCCTTTGAAACG 58.533 43.478 0.00 0.00 44.49 3.60
2692 3094 6.879458 AGTGTTGGTCAGGTTATAAAGATCAC 59.121 38.462 0.00 0.00 0.00 3.06
2745 3147 2.900546 CTGAGGGTACTTCCAAGTGTCT 59.099 50.000 2.01 0.00 40.07 3.41
2878 3282 6.723977 AGAATAGCCCATGTTTCAAGGTAAAA 59.276 34.615 0.00 0.00 0.00 1.52
3266 3808 1.497161 ACCCCATAAGTCCTCTTCCG 58.503 55.000 0.00 0.00 35.36 4.30
3376 3918 5.705609 AAAGGCAACCTACATGTTTACAG 57.294 39.130 2.30 0.00 31.13 2.74
3400 3942 5.809001 ACAAGGATATTGCTTCTCAGTTGA 58.191 37.500 0.00 0.00 0.00 3.18
3407 3949 7.419172 GGGAGTAACTACAAGGATATTGCTTCT 60.419 40.741 0.00 0.00 0.00 2.85
3414 3956 6.210522 ACAAGGGGAGTAACTACAAGGATAT 58.789 40.000 0.00 0.00 0.00 1.63
3463 4005 6.094048 GCATTTCAGAGCAAAGGAATACACTA 59.906 38.462 0.00 0.00 0.00 2.74
3471 4013 2.291209 TGGCATTTCAGAGCAAAGGA 57.709 45.000 0.00 0.00 0.00 3.36
3482 4024 3.940209 TCCATGTCAACTTGGCATTTC 57.060 42.857 6.11 0.00 40.21 2.17
3488 4030 6.808212 GTCACATTTAATCCATGTCAACTTGG 59.192 38.462 8.41 8.41 41.16 3.61
3498 4040 6.899393 AGTGTTGTGTCACATTTAATCCAT 57.101 33.333 6.48 0.00 40.37 3.41
3501 4043 7.435068 AGGTAGTGTTGTGTCACATTTAATC 57.565 36.000 6.48 0.00 40.37 1.75
3532 4074 4.935205 TCTCCAACAAAAGTATCCATGTCG 59.065 41.667 0.00 0.00 0.00 4.35
3560 4103 5.935206 TGCGTTTGTTCAATAAGTCTCCATA 59.065 36.000 0.00 0.00 0.00 2.74
3582 4127 2.704725 ACACAAAATCACCATCGTGC 57.295 45.000 0.00 0.00 40.04 5.34
3585 4130 5.762045 AGAAAGAACACAAAATCACCATCG 58.238 37.500 0.00 0.00 0.00 3.84
3634 4183 6.551385 AGTTCTCTGCAATTCACTGTAAAG 57.449 37.500 0.00 0.00 0.00 1.85
3678 4227 5.705609 TTCAAGAACCTGAGGTTTTATGC 57.294 39.130 19.33 5.07 46.95 3.14
3736 4285 1.267121 TTGCTGACTAGGAGGGACAC 58.733 55.000 0.00 0.00 0.00 3.67
3813 4362 7.709613 GGTTACACACAATCGATTCCTAATAGT 59.290 37.037 7.92 0.00 0.00 2.12
3850 4399 0.534412 AGATCCTCACCAGCACTTCG 59.466 55.000 0.00 0.00 0.00 3.79
3871 4422 3.038280 TGAAGAATCCTAATCTGCGGGA 58.962 45.455 0.00 0.00 0.00 5.14
3878 4429 5.601662 TCCGTGTGATGAAGAATCCTAATC 58.398 41.667 0.00 0.00 34.00 1.75
3890 4441 0.676466 GCCATGGTTCCGTGTGATGA 60.676 55.000 14.67 0.00 0.00 2.92
3909 4460 2.681706 ACAGACATCTTCGCTCTGTTG 58.318 47.619 0.00 0.00 41.53 3.33
3955 4506 8.853126 TCTCATGTGATCAAGAAAGAAACAATT 58.147 29.630 0.00 0.00 0.00 2.32
4005 4582 9.844790 CACAAATCATTAACACACATGATAAGT 57.155 29.630 0.00 0.00 38.88 2.24
4015 4592 7.700022 TCATCATCCACAAATCATTAACACA 57.300 32.000 0.00 0.00 0.00 3.72
4053 4631 9.582648 ACCAAGTTTTACAGTTAAGATACCATT 57.417 29.630 0.00 0.00 0.00 3.16
4121 4700 4.818005 TCTACAGTTGAATATAGACCGCGA 59.182 41.667 8.23 0.00 0.00 5.87
4124 4705 5.913514 CCGTTCTACAGTTGAATATAGACCG 59.086 44.000 0.54 0.00 31.61 4.79
4125 4706 6.214399 CCCGTTCTACAGTTGAATATAGACC 58.786 44.000 0.54 0.00 0.00 3.85
4126 4707 6.183360 ACCCCGTTCTACAGTTGAATATAGAC 60.183 42.308 0.54 0.00 0.00 2.59
4128 4709 5.983720 CACCCCGTTCTACAGTTGAATATAG 59.016 44.000 0.54 0.00 0.00 1.31
4164 4745 0.467384 AGAGCTGTCTGCACAAGTGT 59.533 50.000 0.00 0.00 45.94 3.55
4199 4780 7.876068 TCAGGTTATCAGTTTACTTCGATGTTT 59.124 33.333 9.44 0.00 0.00 2.83
4324 4908 2.590092 CGGGGGCAAGAAGGGTAG 59.410 66.667 0.00 0.00 0.00 3.18
4333 4917 0.699399 TGTTCTTTATCCGGGGGCAA 59.301 50.000 0.00 0.00 0.00 4.52
4335 4919 1.681264 CATTGTTCTTTATCCGGGGGC 59.319 52.381 0.00 0.00 0.00 5.80
4337 4921 3.886123 AGACATTGTTCTTTATCCGGGG 58.114 45.455 0.00 0.00 0.00 5.73
4370 4954 5.125900 TCAGGTTTTGCTACATCATCATTGG 59.874 40.000 0.00 0.00 0.00 3.16
4385 4969 6.382869 ACTTCATTCTGACTTCAGGTTTTG 57.617 37.500 6.40 0.68 43.91 2.44
4389 4973 4.103153 TCCAACTTCATTCTGACTTCAGGT 59.897 41.667 6.40 0.00 43.91 4.00
4400 4984 3.125316 GTCCACACGATCCAACTTCATTC 59.875 47.826 0.00 0.00 0.00 2.67
4444 5032 0.321210 TCCCACAGTTGCACATACGG 60.321 55.000 0.00 0.00 0.00 4.02
4456 5044 2.840651 ACCAGATAGGAACTTCCCACAG 59.159 50.000 4.01 0.00 41.75 3.66
4599 5219 1.729470 ATGTGAGGCGAGGTCTAGCG 61.729 60.000 0.00 0.00 31.73 4.26
4603 5223 2.073252 TCATATGTGAGGCGAGGTCT 57.927 50.000 1.90 0.00 0.00 3.85
4615 5235 4.644685 GGTGGGTGCTTAACATTCATATGT 59.355 41.667 1.90 0.00 46.85 2.29
4625 5245 2.610833 GCGTATTAGGTGGGTGCTTAAC 59.389 50.000 0.00 0.00 0.00 2.01
4652 5272 2.004808 GCCCACAATCTAAAGCCGGC 62.005 60.000 21.89 21.89 0.00 6.13
4684 5304 4.101119 GGCTGCTGATTTAGACCCTACTTA 59.899 45.833 0.00 0.00 0.00 2.24
4685 5305 3.118223 GGCTGCTGATTTAGACCCTACTT 60.118 47.826 0.00 0.00 0.00 2.24
4686 5306 2.436173 GGCTGCTGATTTAGACCCTACT 59.564 50.000 0.00 0.00 0.00 2.57
4776 5455 6.874664 TGTTTATAAATCGCAGGTCTACACAA 59.125 34.615 0.31 0.00 0.00 3.33
4781 5460 8.394877 CACATTTGTTTATAAATCGCAGGTCTA 58.605 33.333 0.31 0.00 0.00 2.59
4802 7114 5.531287 GGGCGTCTTAATTAATCCTCACATT 59.469 40.000 0.00 0.00 0.00 2.71
4977 7607 3.963374 AGACTAATCAGTGCAGGCATAGA 59.037 43.478 0.00 0.00 34.21 1.98
5023 7653 4.844884 AGACTTATGAACTAAACAGGGCC 58.155 43.478 0.00 0.00 0.00 5.80
5024 7654 6.539103 CCTAAGACTTATGAACTAAACAGGGC 59.461 42.308 0.00 0.00 0.00 5.19
5025 7655 7.764901 GTCCTAAGACTTATGAACTAAACAGGG 59.235 40.741 2.20 0.00 40.10 4.45
5026 7656 8.705048 GTCCTAAGACTTATGAACTAAACAGG 57.295 38.462 2.20 0.00 40.10 4.00
5057 7687 4.964593 AGCGACTTTTTAGTTGGGACTAA 58.035 39.130 0.00 0.00 44.49 2.24
5058 7688 4.612264 AGCGACTTTTTAGTTGGGACTA 57.388 40.909 0.00 0.00 37.33 2.59
5059 7689 3.487120 AGCGACTTTTTAGTTGGGACT 57.513 42.857 0.00 0.00 39.97 3.85
5060 7690 4.313282 ACTAGCGACTTTTTAGTTGGGAC 58.687 43.478 0.00 0.00 0.00 4.46
5061 7691 4.562143 GGACTAGCGACTTTTTAGTTGGGA 60.562 45.833 0.00 0.00 0.00 4.37
5062 7692 3.683340 GGACTAGCGACTTTTTAGTTGGG 59.317 47.826 0.00 0.00 0.00 4.12
5063 7693 3.683340 GGGACTAGCGACTTTTTAGTTGG 59.317 47.826 0.00 0.00 0.00 3.77
5064 7694 4.566987 AGGGACTAGCGACTTTTTAGTTG 58.433 43.478 0.00 0.00 36.02 3.16
5065 7695 4.886496 AGGGACTAGCGACTTTTTAGTT 57.114 40.909 0.00 0.00 36.02 2.24
5066 7696 5.990120 TTAGGGACTAGCGACTTTTTAGT 57.010 39.130 0.00 0.00 44.25 2.24
5067 7697 7.662604 TTTTTAGGGACTAGCGACTTTTTAG 57.337 36.000 0.00 0.00 44.25 1.85
5088 7718 6.211384 CAGGAACCAAACAGATAGGGATTTTT 59.789 38.462 0.00 0.00 0.00 1.94
5089 7719 5.716703 CAGGAACCAAACAGATAGGGATTTT 59.283 40.000 0.00 0.00 0.00 1.82
5090 7720 5.015178 TCAGGAACCAAACAGATAGGGATTT 59.985 40.000 0.00 0.00 0.00 2.17
5091 7721 4.540099 TCAGGAACCAAACAGATAGGGATT 59.460 41.667 0.00 0.00 0.00 3.01
5092 7722 4.111577 TCAGGAACCAAACAGATAGGGAT 58.888 43.478 0.00 0.00 0.00 3.85
5093 7723 3.519510 CTCAGGAACCAAACAGATAGGGA 59.480 47.826 0.00 0.00 0.00 4.20
5094 7724 3.519510 TCTCAGGAACCAAACAGATAGGG 59.480 47.826 0.00 0.00 0.00 3.53
5095 7725 4.223923 ACTCTCAGGAACCAAACAGATAGG 59.776 45.833 0.00 0.00 0.00 2.57
5096 7726 5.413309 ACTCTCAGGAACCAAACAGATAG 57.587 43.478 0.00 0.00 0.00 2.08
5097 7727 6.928348 TTACTCTCAGGAACCAAACAGATA 57.072 37.500 0.00 0.00 0.00 1.98
5098 7728 5.825593 TTACTCTCAGGAACCAAACAGAT 57.174 39.130 0.00 0.00 0.00 2.90
5099 7729 5.104693 TGTTTACTCTCAGGAACCAAACAGA 60.105 40.000 0.00 0.00 32.41 3.41
5100 7730 5.123227 TGTTTACTCTCAGGAACCAAACAG 58.877 41.667 0.00 0.00 32.41 3.16
5101 7731 5.105567 TGTTTACTCTCAGGAACCAAACA 57.894 39.130 0.00 0.00 33.40 2.83
5102 7732 5.048713 CCATGTTTACTCTCAGGAACCAAAC 60.049 44.000 0.00 0.00 0.00 2.93
5103 7733 5.070001 CCATGTTTACTCTCAGGAACCAAA 58.930 41.667 0.00 0.00 0.00 3.28
5104 7734 4.349636 TCCATGTTTACTCTCAGGAACCAA 59.650 41.667 0.00 0.00 0.00 3.67
5105 7735 3.907474 TCCATGTTTACTCTCAGGAACCA 59.093 43.478 0.00 0.00 0.00 3.67
5106 7736 4.020128 AGTCCATGTTTACTCTCAGGAACC 60.020 45.833 0.00 0.00 0.00 3.62
5107 7737 5.153950 AGTCCATGTTTACTCTCAGGAAC 57.846 43.478 0.00 0.00 0.00 3.62
5108 7738 6.724441 TCTTAGTCCATGTTTACTCTCAGGAA 59.276 38.462 0.00 0.00 0.00 3.36
5109 7739 6.253758 TCTTAGTCCATGTTTACTCTCAGGA 58.746 40.000 0.00 0.00 0.00 3.86
5110 7740 6.378564 TCTCTTAGTCCATGTTTACTCTCAGG 59.621 42.308 0.00 0.00 0.00 3.86
5111 7741 7.254852 GTCTCTTAGTCCATGTTTACTCTCAG 58.745 42.308 0.00 0.00 0.00 3.35
5112 7742 6.153000 GGTCTCTTAGTCCATGTTTACTCTCA 59.847 42.308 0.00 0.00 0.00 3.27
5113 7743 6.153000 TGGTCTCTTAGTCCATGTTTACTCTC 59.847 42.308 0.00 0.00 28.55 3.20
5114 7744 6.017192 TGGTCTCTTAGTCCATGTTTACTCT 58.983 40.000 0.00 0.00 28.55 3.24
5115 7745 6.282199 TGGTCTCTTAGTCCATGTTTACTC 57.718 41.667 0.00 0.00 28.55 2.59
5116 7746 6.875972 ATGGTCTCTTAGTCCATGTTTACT 57.124 37.500 5.12 0.00 41.46 2.24
5123 7753 6.213600 AGTTGTAACATGGTCTCTTAGTCCAT 59.786 38.462 0.00 0.58 43.31 3.41
5124 7754 5.542635 AGTTGTAACATGGTCTCTTAGTCCA 59.457 40.000 0.00 0.00 37.79 4.02
5125 7755 6.038997 AGTTGTAACATGGTCTCTTAGTCC 57.961 41.667 0.00 0.00 0.00 3.85
5126 7756 9.485206 TTTTAGTTGTAACATGGTCTCTTAGTC 57.515 33.333 0.00 0.00 0.00 2.59
5127 7757 9.490379 CTTTTAGTTGTAACATGGTCTCTTAGT 57.510 33.333 0.00 0.00 0.00 2.24
5128 7758 9.706691 TCTTTTAGTTGTAACATGGTCTCTTAG 57.293 33.333 0.00 0.00 0.00 2.18
5129 7759 9.485206 GTCTTTTAGTTGTAACATGGTCTCTTA 57.515 33.333 0.00 0.00 0.00 2.10
5130 7760 7.444487 GGTCTTTTAGTTGTAACATGGTCTCTT 59.556 37.037 0.00 0.00 0.00 2.85
5131 7761 6.935208 GGTCTTTTAGTTGTAACATGGTCTCT 59.065 38.462 0.00 0.00 0.00 3.10
5132 7762 6.148976 GGGTCTTTTAGTTGTAACATGGTCTC 59.851 42.308 0.00 0.00 0.00 3.36
5133 7763 6.002082 GGGTCTTTTAGTTGTAACATGGTCT 58.998 40.000 0.00 0.00 0.00 3.85
5134 7764 5.766174 TGGGTCTTTTAGTTGTAACATGGTC 59.234 40.000 0.00 0.00 0.00 4.02
5135 7765 5.697067 TGGGTCTTTTAGTTGTAACATGGT 58.303 37.500 0.00 0.00 0.00 3.55
5136 7766 6.642707 TTGGGTCTTTTAGTTGTAACATGG 57.357 37.500 0.00 0.00 0.00 3.66
5137 7767 8.934507 TTTTTGGGTCTTTTAGTTGTAACATG 57.065 30.769 0.00 0.00 0.00 3.21
5138 7768 8.973182 TCTTTTTGGGTCTTTTAGTTGTAACAT 58.027 29.630 0.00 0.00 0.00 2.71
5139 7769 8.245491 GTCTTTTTGGGTCTTTTAGTTGTAACA 58.755 33.333 0.00 0.00 0.00 2.41
5140 7770 8.464404 AGTCTTTTTGGGTCTTTTAGTTGTAAC 58.536 33.333 0.00 0.00 0.00 2.50
5141 7771 8.584063 AGTCTTTTTGGGTCTTTTAGTTGTAA 57.416 30.769 0.00 0.00 0.00 2.41
5142 7772 8.584063 AAGTCTTTTTGGGTCTTTTAGTTGTA 57.416 30.769 0.00 0.00 0.00 2.41
5143 7773 7.476540 AAGTCTTTTTGGGTCTTTTAGTTGT 57.523 32.000 0.00 0.00 0.00 3.32
5144 7774 7.491372 GGAAAGTCTTTTTGGGTCTTTTAGTTG 59.509 37.037 0.00 0.00 0.00 3.16
5145 7775 7.553334 GGAAAGTCTTTTTGGGTCTTTTAGTT 58.447 34.615 0.00 0.00 0.00 2.24
5146 7776 6.183360 CGGAAAGTCTTTTTGGGTCTTTTAGT 60.183 38.462 0.00 0.00 0.00 2.24
5147 7777 6.183360 ACGGAAAGTCTTTTTGGGTCTTTTAG 60.183 38.462 0.00 0.00 0.00 1.85
5148 7778 5.653330 ACGGAAAGTCTTTTTGGGTCTTTTA 59.347 36.000 0.00 0.00 0.00 1.52
5149 7779 4.464951 ACGGAAAGTCTTTTTGGGTCTTTT 59.535 37.500 0.00 0.00 0.00 2.27
5150 7780 4.021229 ACGGAAAGTCTTTTTGGGTCTTT 58.979 39.130 0.00 0.00 0.00 2.52
5151 7781 3.628008 ACGGAAAGTCTTTTTGGGTCTT 58.372 40.909 0.00 0.00 0.00 3.01
5152 7782 3.211865 GACGGAAAGTCTTTTTGGGTCT 58.788 45.455 0.00 0.00 46.13 3.85
5153 7783 3.620929 GACGGAAAGTCTTTTTGGGTC 57.379 47.619 0.00 2.09 46.13 4.46
5164 7794 3.055312 GGAATAAGACCCTGACGGAAAGT 60.055 47.826 0.00 0.00 34.64 2.66
5165 7795 3.055385 TGGAATAAGACCCTGACGGAAAG 60.055 47.826 0.00 0.00 34.64 2.62
5166 7796 2.907696 TGGAATAAGACCCTGACGGAAA 59.092 45.455 0.00 0.00 34.64 3.13
5167 7797 2.542550 TGGAATAAGACCCTGACGGAA 58.457 47.619 0.00 0.00 34.64 4.30
5168 7798 2.241281 TGGAATAAGACCCTGACGGA 57.759 50.000 0.00 0.00 34.64 4.69
5169 7799 4.682778 TTATGGAATAAGACCCTGACGG 57.317 45.455 0.00 0.00 32.95 4.79
5180 7810 4.898861 GGGCATTTGGGACTTATGGAATAA 59.101 41.667 0.00 0.00 36.20 1.40
5181 7811 4.078922 TGGGCATTTGGGACTTATGGAATA 60.079 41.667 0.00 0.00 0.00 1.75
5182 7812 3.308401 GGGCATTTGGGACTTATGGAAT 58.692 45.455 0.00 0.00 0.00 3.01
5183 7813 2.043664 TGGGCATTTGGGACTTATGGAA 59.956 45.455 0.00 0.00 0.00 3.53
5184 7814 1.643286 TGGGCATTTGGGACTTATGGA 59.357 47.619 0.00 0.00 0.00 3.41
5185 7815 1.756538 GTGGGCATTTGGGACTTATGG 59.243 52.381 0.00 0.00 0.00 2.74
5186 7816 2.738743 AGTGGGCATTTGGGACTTATG 58.261 47.619 0.00 0.00 0.00 1.90
5187 7817 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
5188 7818 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
5189 7819 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
5190 7820 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
5191 7821 2.897326 ACTTAAAGTGGGCATTTGGGAC 59.103 45.455 0.00 0.00 0.00 4.46
5192 7822 3.161866 GACTTAAAGTGGGCATTTGGGA 58.838 45.455 0.00 0.00 0.00 4.37
5193 7823 2.233676 GGACTTAAAGTGGGCATTTGGG 59.766 50.000 0.00 0.00 0.00 4.12
5194 7824 3.165071 AGGACTTAAAGTGGGCATTTGG 58.835 45.455 0.00 0.00 0.00 3.28
5195 7825 4.871933 AAGGACTTAAAGTGGGCATTTG 57.128 40.909 0.00 0.00 0.00 2.32
5196 7826 7.893833 ACTTATAAGGACTTAAAGTGGGCATTT 59.106 33.333 16.73 0.00 31.61 2.32
5197 7827 7.410991 ACTTATAAGGACTTAAAGTGGGCATT 58.589 34.615 16.73 0.00 31.61 3.56
5198 7828 6.970191 ACTTATAAGGACTTAAAGTGGGCAT 58.030 36.000 16.73 0.00 31.61 4.40
5199 7829 6.382919 ACTTATAAGGACTTAAAGTGGGCA 57.617 37.500 16.73 0.00 31.61 5.36
5200 7830 5.821470 GGACTTATAAGGACTTAAAGTGGGC 59.179 44.000 16.73 8.52 32.26 5.36
5201 7831 6.158169 AGGGACTTATAAGGACTTAAAGTGGG 59.842 42.308 16.73 0.00 27.25 4.61
5202 7832 7.196637 AGGGACTTATAAGGACTTAAAGTGG 57.803 40.000 16.73 0.00 27.25 4.00
5203 7833 7.125963 AGGAGGGACTTATAAGGACTTAAAGTG 59.874 40.741 16.73 4.81 41.55 3.16
5204 7834 7.125963 CAGGAGGGACTTATAAGGACTTAAAGT 59.874 40.741 16.73 14.02 41.55 2.66
5205 7835 7.125963 ACAGGAGGGACTTATAAGGACTTAAAG 59.874 40.741 16.73 4.02 41.55 1.85
5206 7836 6.964086 ACAGGAGGGACTTATAAGGACTTAAA 59.036 38.462 16.73 0.00 41.55 1.52
5207 7837 6.509386 ACAGGAGGGACTTATAAGGACTTAA 58.491 40.000 16.73 0.00 41.55 1.85
5208 7838 6.101274 ACAGGAGGGACTTATAAGGACTTA 57.899 41.667 16.73 0.00 41.55 2.24
5209 7839 4.961585 ACAGGAGGGACTTATAAGGACTT 58.038 43.478 16.73 5.36 41.55 3.01
5210 7840 4.628661 ACAGGAGGGACTTATAAGGACT 57.371 45.455 16.73 10.75 41.55 3.85
5211 7841 5.429130 CAAACAGGAGGGACTTATAAGGAC 58.571 45.833 16.73 9.80 41.55 3.85
5212 7842 4.473559 CCAAACAGGAGGGACTTATAAGGA 59.526 45.833 16.73 0.00 41.55 3.36
5213 7843 4.227527 ACCAAACAGGAGGGACTTATAAGG 59.772 45.833 16.73 0.00 41.55 2.69
5214 7844 5.437191 ACCAAACAGGAGGGACTTATAAG 57.563 43.478 11.05 11.05 41.55 1.73
5215 7845 5.853572 AACCAAACAGGAGGGACTTATAA 57.146 39.130 0.00 0.00 41.55 0.98
5216 7846 5.853572 AAACCAAACAGGAGGGACTTATA 57.146 39.130 0.00 0.00 41.55 0.98
5217 7847 4.741928 AAACCAAACAGGAGGGACTTAT 57.258 40.909 0.00 0.00 41.55 1.73
5218 7848 4.529716 AAAACCAAACAGGAGGGACTTA 57.470 40.909 0.00 0.00 41.55 2.24
5219 7849 3.398318 AAAACCAAACAGGAGGGACTT 57.602 42.857 0.00 0.00 41.55 3.01
5221 7851 4.212716 ACTTAAAACCAAACAGGAGGGAC 58.787 43.478 0.00 0.00 41.22 4.46
5222 7852 4.466827 GACTTAAAACCAAACAGGAGGGA 58.533 43.478 0.00 0.00 41.22 4.20
5223 7853 3.572682 GGACTTAAAACCAAACAGGAGGG 59.427 47.826 0.00 0.00 41.22 4.30
5224 7854 3.572682 GGGACTTAAAACCAAACAGGAGG 59.427 47.826 0.00 0.00 41.22 4.30
5225 7855 4.278419 CAGGGACTTAAAACCAAACAGGAG 59.722 45.833 0.00 0.00 36.02 3.69
5226 7856 4.211920 CAGGGACTTAAAACCAAACAGGA 58.788 43.478 0.00 0.00 36.02 3.86
5227 7857 3.958147 ACAGGGACTTAAAACCAAACAGG 59.042 43.478 0.00 0.00 39.99 4.00
5228 7858 6.702716 TTACAGGGACTTAAAACCAAACAG 57.297 37.500 0.00 0.00 34.60 3.16
5229 7859 6.436532 TGTTTACAGGGACTTAAAACCAAACA 59.563 34.615 0.00 0.00 38.80 2.83
5230 7860 6.865411 TGTTTACAGGGACTTAAAACCAAAC 58.135 36.000 0.00 0.00 38.80 2.93
5231 7861 7.477945 TTGTTTACAGGGACTTAAAACCAAA 57.522 32.000 0.00 0.00 38.80 3.28
5232 7862 7.039223 TGTTTGTTTACAGGGACTTAAAACCAA 60.039 33.333 0.00 0.00 38.80 3.67
5233 7863 6.436532 TGTTTGTTTACAGGGACTTAAAACCA 59.563 34.615 0.00 0.00 38.80 3.67
5234 7864 6.865411 TGTTTGTTTACAGGGACTTAAAACC 58.135 36.000 0.00 0.00 38.80 3.27
5235 7865 7.650504 GGATGTTTGTTTACAGGGACTTAAAAC 59.349 37.037 0.00 0.00 39.53 2.43
5236 7866 7.342284 TGGATGTTTGTTTACAGGGACTTAAAA 59.658 33.333 0.00 0.00 34.60 1.52
5237 7867 6.834451 TGGATGTTTGTTTACAGGGACTTAAA 59.166 34.615 0.00 0.00 34.60 1.52
5238 7868 6.263617 GTGGATGTTTGTTTACAGGGACTTAA 59.736 38.462 0.00 0.00 34.60 1.85
5239 7869 5.766174 GTGGATGTTTGTTTACAGGGACTTA 59.234 40.000 0.00 0.00 34.60 2.24
5240 7870 4.583073 GTGGATGTTTGTTTACAGGGACTT 59.417 41.667 0.00 0.00 34.60 3.01
5241 7871 4.141251 AGTGGATGTTTGTTTACAGGGACT 60.141 41.667 0.00 0.00 43.88 3.85
5242 7872 4.142038 AGTGGATGTTTGTTTACAGGGAC 58.858 43.478 0.00 0.00 0.00 4.46
5243 7873 4.447138 AGTGGATGTTTGTTTACAGGGA 57.553 40.909 0.00 0.00 0.00 4.20
5244 7874 6.834168 ATTAGTGGATGTTTGTTTACAGGG 57.166 37.500 0.00 0.00 0.00 4.45
5250 7880 8.413229 GGTGCATATATTAGTGGATGTTTGTTT 58.587 33.333 0.00 0.00 0.00 2.83
5251 7881 7.559533 TGGTGCATATATTAGTGGATGTTTGTT 59.440 33.333 0.00 0.00 0.00 2.83
5252 7882 7.013274 GTGGTGCATATATTAGTGGATGTTTGT 59.987 37.037 0.00 0.00 0.00 2.83
5253 7883 7.362662 GTGGTGCATATATTAGTGGATGTTTG 58.637 38.462 0.00 0.00 0.00 2.93
5254 7884 6.490040 GGTGGTGCATATATTAGTGGATGTTT 59.510 38.462 0.00 0.00 0.00 2.83
5255 7885 6.003950 GGTGGTGCATATATTAGTGGATGTT 58.996 40.000 0.00 0.00 0.00 2.71
5256 7886 5.560724 GGTGGTGCATATATTAGTGGATGT 58.439 41.667 0.00 0.00 0.00 3.06
5257 7887 4.631377 CGGTGGTGCATATATTAGTGGATG 59.369 45.833 0.00 0.00 0.00 3.51
5258 7888 4.530553 TCGGTGGTGCATATATTAGTGGAT 59.469 41.667 0.00 0.00 0.00 3.41
5259 7889 3.898741 TCGGTGGTGCATATATTAGTGGA 59.101 43.478 0.00 0.00 0.00 4.02
5260 7890 4.265904 TCGGTGGTGCATATATTAGTGG 57.734 45.455 0.00 0.00 0.00 4.00
5261 7891 7.097192 ACTAATCGGTGGTGCATATATTAGTG 58.903 38.462 13.98 0.00 37.31 2.74
5262 7892 7.241042 ACTAATCGGTGGTGCATATATTAGT 57.759 36.000 0.00 2.20 35.12 2.24
5286 7916 6.932960 GGCTAAGTACAGAAGTTTAAGTGGAA 59.067 38.462 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.