Multiple sequence alignment - TraesCS5B01G222500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G222500 chr5B 100.000 5262 0 0 1 5262 397512718 397517979 0.000000e+00 9718.0
1 TraesCS5B01G222500 chr5B 95.968 124 4 1 4436 4559 514682581 514682459 3.210000e-47 200.0
2 TraesCS5B01G222500 chr5B 95.082 122 6 0 4438 4559 702225591 702225470 5.380000e-45 193.0
3 TraesCS5B01G222500 chr5B 94.262 122 7 0 4440 4561 79817995 79817874 2.500000e-43 187.0
4 TraesCS5B01G222500 chr5B 94.262 122 7 0 4442 4563 173271476 173271597 2.500000e-43 187.0
5 TraesCS5B01G222500 chr5D 94.456 2850 114 19 1612 4424 338387442 338390284 0.000000e+00 4348.0
6 TraesCS5B01G222500 chr5D 86.786 1453 111 36 33 1443 338385928 338387341 0.000000e+00 1544.0
7 TraesCS5B01G222500 chr5D 91.519 566 43 3 4698 5259 225262317 225261753 0.000000e+00 774.0
8 TraesCS5B01G222500 chr5D 91.021 568 44 4 4698 5259 438556772 438557338 0.000000e+00 760.0
9 TraesCS5B01G222500 chr5D 90.407 344 25 5 1 339 338382942 338383282 3.740000e-121 446.0
10 TraesCS5B01G222500 chr5D 94.215 121 7 0 4436 4556 30459065 30459185 9.000000e-43 185.0
11 TraesCS5B01G222500 chr5A 95.858 2680 85 16 1663 4317 439375026 439377704 0.000000e+00 4311.0
12 TraesCS5B01G222500 chr5A 88.896 1468 99 34 1 1451 439373455 439374875 0.000000e+00 1749.0
13 TraesCS5B01G222500 chr5A 94.175 103 5 1 4342 4443 439377782 439377884 7.060000e-34 156.0
14 TraesCS5B01G222500 chr2D 90.459 566 47 5 4698 5259 150623658 150624220 0.000000e+00 739.0
15 TraesCS5B01G222500 chr4A 90.681 558 41 4 4698 5254 678142114 678142661 0.000000e+00 732.0
16 TraesCS5B01G222500 chr4B 92.688 506 37 0 4748 5253 667653076 667652571 0.000000e+00 730.0
17 TraesCS5B01G222500 chr4B 74.500 200 45 6 3108 3304 660354362 660354558 1.210000e-11 82.4
18 TraesCS5B01G222500 chr7D 90.106 566 48 6 4698 5259 105556963 105556402 0.000000e+00 728.0
19 TraesCS5B01G222500 chr7D 88.516 566 57 5 4698 5259 404059062 404059623 0.000000e+00 678.0
20 TraesCS5B01G222500 chr7B 89.929 566 48 5 4698 5259 518343033 518342473 0.000000e+00 721.0
21 TraesCS5B01G222500 chr1A 90.820 512 47 0 4748 5259 460018432 460017921 0.000000e+00 686.0
22 TraesCS5B01G222500 chr1A 71.825 937 184 59 2819 3721 549359452 549358562 1.500000e-45 195.0
23 TraesCS5B01G222500 chr1A 70.636 1117 230 78 2918 3986 119710745 119709679 7.060000e-34 156.0
24 TraesCS5B01G222500 chr1A 81.416 113 17 4 3803 3913 549358492 549358382 7.260000e-14 89.8
25 TraesCS5B01G222500 chr1B 96.610 118 4 0 4442 4559 15300447 15300330 4.160000e-46 196.0
26 TraesCS5B01G222500 chr1B 73.190 649 115 46 3107 3721 626154322 626154945 4.190000e-41 180.0
27 TraesCS5B01G222500 chr1B 70.595 840 184 47 2918 3724 172008267 172007458 1.990000e-24 124.0
28 TraesCS5B01G222500 chrUn 94.355 124 7 0 4433 4556 88642455 88642578 1.930000e-44 191.0
29 TraesCS5B01G222500 chrUn 94.355 124 7 0 4433 4556 283732546 283732669 1.930000e-44 191.0
30 TraesCS5B01G222500 chr6B 94.958 119 6 0 4438 4556 130306041 130306159 2.500000e-43 187.0
31 TraesCS5B01G222500 chr6B 92.308 52 4 0 4587 4638 543848112 543848061 2.030000e-09 75.0
32 TraesCS5B01G222500 chr1D 70.751 1118 225 79 2918 3986 112469587 112468523 5.450000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G222500 chr5B 397512718 397517979 5261 False 9718.000000 9718 100.000000 1 5262 1 chr5B.!!$F2 5261
1 TraesCS5B01G222500 chr5D 338382942 338390284 7342 False 2112.666667 4348 90.549667 1 4424 3 chr5D.!!$F3 4423
2 TraesCS5B01G222500 chr5D 225261753 225262317 564 True 774.000000 774 91.519000 4698 5259 1 chr5D.!!$R1 561
3 TraesCS5B01G222500 chr5D 438556772 438557338 566 False 760.000000 760 91.021000 4698 5259 1 chr5D.!!$F2 561
4 TraesCS5B01G222500 chr5A 439373455 439377884 4429 False 2072.000000 4311 92.976333 1 4443 3 chr5A.!!$F1 4442
5 TraesCS5B01G222500 chr2D 150623658 150624220 562 False 739.000000 739 90.459000 4698 5259 1 chr2D.!!$F1 561
6 TraesCS5B01G222500 chr4A 678142114 678142661 547 False 732.000000 732 90.681000 4698 5254 1 chr4A.!!$F1 556
7 TraesCS5B01G222500 chr4B 667652571 667653076 505 True 730.000000 730 92.688000 4748 5253 1 chr4B.!!$R1 505
8 TraesCS5B01G222500 chr7D 105556402 105556963 561 True 728.000000 728 90.106000 4698 5259 1 chr7D.!!$R1 561
9 TraesCS5B01G222500 chr7D 404059062 404059623 561 False 678.000000 678 88.516000 4698 5259 1 chr7D.!!$F1 561
10 TraesCS5B01G222500 chr7B 518342473 518343033 560 True 721.000000 721 89.929000 4698 5259 1 chr7B.!!$R1 561
11 TraesCS5B01G222500 chr1A 460017921 460018432 511 True 686.000000 686 90.820000 4748 5259 1 chr1A.!!$R2 511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
597 3594 0.251916 TAACCCACCATCAAGAGGCG 59.748 55.0 0.0 0.0 0.0 5.52 F
795 3792 0.320683 GGGAATTTTGGTGTGCTGGC 60.321 55.0 0.0 0.0 0.0 4.85 F
796 3793 0.320683 GGAATTTTGGTGTGCTGGCC 60.321 55.0 0.0 0.0 0.0 5.36 F
1439 4450 0.382515 CTACCACCACTAGCTCGCTC 59.617 60.0 0.0 0.0 0.0 5.03 F
1609 4622 0.250597 AAGTACGTGGCCCTGGTTTC 60.251 55.0 0.0 0.0 0.0 2.78 F
3089 6114 0.036388 GATCCCTGCACCTTCGACAA 60.036 55.0 0.0 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1564 4577 0.107703 TCTCATCGGCATTTCGGCTT 60.108 50.000 0.00 0.00 38.27 4.35 R
1598 4611 0.467290 TTGTGTCAGAAACCAGGGCC 60.467 55.000 0.00 0.00 0.00 5.80 R
1599 4612 0.668535 GTTGTGTCAGAAACCAGGGC 59.331 55.000 0.00 0.00 0.00 5.19 R
2523 5540 1.885871 GCTGGTGCCATGGAAGAAC 59.114 57.895 18.40 7.34 0.00 3.01 R
3410 6435 2.616330 GGGGTCACGACGTACACGA 61.616 63.158 9.04 0.00 43.02 4.35 R
4527 7638 0.030369 CCGGAAATACTCGTCGGAGG 59.970 60.000 0.00 0.00 44.93 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.604976 AGCGTACTAACCGTAATCATGTC 58.395 43.478 0.00 0.00 0.00 3.06
36 38 6.627395 ACCGTAATCATGTCTTTTGTTCAA 57.373 33.333 0.00 0.00 0.00 2.69
65 67 7.446931 TGTGAGCCTTTCATAAGTTTGTTATGA 59.553 33.333 3.80 3.80 39.02 2.15
67 69 8.461222 TGAGCCTTTCATAAGTTTGTTATGATG 58.539 33.333 7.99 5.33 40.04 3.07
103 105 5.006844 AGTCTATACTCATTGAGACGTGTCG 59.993 44.000 20.33 0.00 42.56 4.35
104 106 4.874396 TCTATACTCATTGAGACGTGTCGT 59.126 41.667 20.33 2.02 45.10 4.34
105 107 2.795175 ACTCATTGAGACGTGTCGTT 57.205 45.000 20.33 0.00 41.37 3.85
144 149 2.804527 GACGTGTTTGGTCTTAGGGTTC 59.195 50.000 0.00 0.00 0.00 3.62
164 170 6.073548 GGGTTCAAGAATCTATGTAGAATGCG 60.074 42.308 0.00 0.00 35.69 4.73
171 177 5.683876 ATCTATGTAGAATGCGGCCTTAT 57.316 39.130 0.00 0.00 35.69 1.73
178 184 2.172717 AGAATGCGGCCTTATGGTTAGT 59.827 45.455 0.00 0.00 35.27 2.24
188 194 4.395231 GCCTTATGGTTAGTGAGGTTTGTC 59.605 45.833 0.00 0.00 35.27 3.18
242 3206 4.037858 AGCTGTTATGCTATTTGCTTGC 57.962 40.909 0.00 0.00 42.10 4.01
273 3237 4.809193 TGTATAGGCATGAGACTCTCCTT 58.191 43.478 13.90 7.40 32.95 3.36
312 3279 4.244066 CAGAGGAAGAATCTATGATGCCG 58.756 47.826 0.00 0.00 0.00 5.69
322 3289 1.463831 CTATGATGCCGCATGCTTCTC 59.536 52.381 17.13 7.70 42.91 2.87
339 3306 2.950781 TCTCGTATGCTCCATCCTCTT 58.049 47.619 0.00 0.00 0.00 2.85
343 3313 1.141657 GTATGCTCCATCCTCTTGGCA 59.858 52.381 0.00 0.00 36.66 4.92
346 3316 1.453762 GCTCCATCCTCTTGGCATGC 61.454 60.000 9.90 9.90 36.66 4.06
351 3321 1.945394 CATCCTCTTGGCATGCTACAC 59.055 52.381 18.92 0.53 0.00 2.90
399 3369 4.329256 GTCCAGACGTCCAACTAATTAAGC 59.671 45.833 13.01 0.00 0.00 3.09
498 3495 4.713792 ATGAAATCCATCTAGACACCCC 57.286 45.455 0.00 0.00 0.00 4.95
585 3582 3.412386 AGAAGCATTGACACTAACCCAC 58.588 45.455 0.00 0.00 0.00 4.61
586 3583 2.200373 AGCATTGACACTAACCCACC 57.800 50.000 0.00 0.00 0.00 4.61
587 3584 1.423541 AGCATTGACACTAACCCACCA 59.576 47.619 0.00 0.00 0.00 4.17
594 3591 3.007940 TGACACTAACCCACCATCAAGAG 59.992 47.826 0.00 0.00 0.00 2.85
597 3594 0.251916 TAACCCACCATCAAGAGGCG 59.748 55.000 0.00 0.00 0.00 5.52
599 3596 1.153289 CCCACCATCAAGAGGCGAG 60.153 63.158 0.00 0.00 0.00 5.03
619 3616 4.526970 GAGGCCTAATGTTTCTTGGATGA 58.473 43.478 4.42 0.00 0.00 2.92
630 3627 6.563422 TGTTTCTTGGATGACTTGAACTTTG 58.437 36.000 0.00 0.00 0.00 2.77
652 3649 5.012239 TGAGCAATTAAGCATGGACTTTCT 58.988 37.500 0.00 0.00 36.85 2.52
686 3683 4.731313 ATGCCTAGGAATTTAGGGGAAG 57.269 45.455 14.75 0.00 40.52 3.46
762 3759 6.406961 GCCGGATAGTAATCATCACATGGATA 60.407 42.308 5.05 0.00 33.95 2.59
793 3790 1.047002 TGGGGAATTTTGGTGTGCTG 58.953 50.000 0.00 0.00 0.00 4.41
794 3791 0.321346 GGGGAATTTTGGTGTGCTGG 59.679 55.000 0.00 0.00 0.00 4.85
795 3792 0.320683 GGGAATTTTGGTGTGCTGGC 60.321 55.000 0.00 0.00 0.00 4.85
796 3793 0.320683 GGAATTTTGGTGTGCTGGCC 60.321 55.000 0.00 0.00 0.00 5.36
997 3997 2.979676 CAGCAGCAAGGACGGCAA 60.980 61.111 0.00 0.00 32.74 4.52
1133 4142 6.204852 TGGCCAGATCATCAAGGTAAATAT 57.795 37.500 0.00 0.00 0.00 1.28
1134 4143 7.328404 TGGCCAGATCATCAAGGTAAATATA 57.672 36.000 0.00 0.00 0.00 0.86
1135 4144 7.932134 TGGCCAGATCATCAAGGTAAATATAT 58.068 34.615 0.00 0.00 0.00 0.86
1154 4164 5.657470 ATATGATCGTTACATGTGTGCAC 57.343 39.130 10.75 10.75 0.00 4.57
1156 4166 2.478514 TGATCGTTACATGTGTGCACAC 59.521 45.455 37.28 37.28 45.05 3.82
1174 4184 4.998024 GCGTGCGTGCAAATGCCA 62.998 61.111 2.46 0.00 41.18 4.92
1175 4185 3.098958 CGTGCGTGCAAATGCCAC 61.099 61.111 2.46 3.35 41.18 5.01
1176 4186 2.027314 GTGCGTGCAAATGCCACA 59.973 55.556 2.46 0.00 41.18 4.17
1177 4187 2.017783 GTGCGTGCAAATGCCACAG 61.018 57.895 2.46 0.81 41.18 3.66
1178 4188 3.107661 GCGTGCAAATGCCACAGC 61.108 61.111 2.46 6.14 41.18 4.40
1202 4212 3.134458 CCTCGCTTCACTTGTTCTTCTT 58.866 45.455 0.00 0.00 0.00 2.52
1203 4213 3.059325 CCTCGCTTCACTTGTTCTTCTTG 60.059 47.826 0.00 0.00 0.00 3.02
1205 4215 3.938963 TCGCTTCACTTGTTCTTCTTGTT 59.061 39.130 0.00 0.00 0.00 2.83
1229 4239 4.803426 CCACGCGTCCTCAGCTCC 62.803 72.222 9.86 0.00 0.00 4.70
1232 4242 4.838486 CGCGTCCTCAGCTCCGTC 62.838 72.222 0.00 0.00 0.00 4.79
1233 4243 3.444805 GCGTCCTCAGCTCCGTCT 61.445 66.667 0.00 0.00 0.00 4.18
1235 4245 2.795297 GTCCTCAGCTCCGTCTCG 59.205 66.667 0.00 0.00 0.00 4.04
1236 4246 2.041686 GTCCTCAGCTCCGTCTCGT 61.042 63.158 0.00 0.00 0.00 4.18
1237 4247 2.041115 TCCTCAGCTCCGTCTCGTG 61.041 63.158 0.00 0.00 0.00 4.35
1238 4248 2.487428 CTCAGCTCCGTCTCGTGG 59.513 66.667 0.00 0.00 0.00 4.94
1239 4249 2.282251 TCAGCTCCGTCTCGTGGT 60.282 61.111 0.00 0.00 0.00 4.16
1242 4253 2.430921 GCTCCGTCTCGTGGTGTG 60.431 66.667 0.00 0.00 0.00 3.82
1248 4259 1.361271 GTCTCGTGGTGTGGTTCGA 59.639 57.895 0.00 0.00 0.00 3.71
1253 4264 2.110213 TGGTGTGGTTCGACCTGC 59.890 61.111 5.77 0.00 39.58 4.85
1259 4270 3.499737 GGTTCGACCTGCATGCCG 61.500 66.667 16.68 11.60 34.73 5.69
1266 4277 3.803082 CCTGCATGCCGTTCACCG 61.803 66.667 16.68 0.00 0.00 4.94
1267 4278 4.465512 CTGCATGCCGTTCACCGC 62.466 66.667 16.68 0.00 34.38 5.68
1285 4296 2.434843 CCCCGCCATGAGCAGTAGA 61.435 63.158 0.00 0.00 44.04 2.59
1295 4306 4.382901 CCATGAGCAGTAGAAGAAGCTTCT 60.383 45.833 23.49 23.49 37.48 2.85
1302 4313 5.406649 CAGTAGAAGAAGCTTCTGATCGTT 58.593 41.667 29.09 12.75 35.92 3.85
1306 4317 3.143807 AGAAGCTTCTGATCGTTCGAG 57.856 47.619 27.96 0.00 35.89 4.04
1308 4319 0.814457 AGCTTCTGATCGTTCGAGCT 59.186 50.000 11.46 11.00 0.00 4.09
1346 4357 1.349259 CTTTGCTTTGGCGCTCATGC 61.349 55.000 7.64 11.54 42.25 4.06
1347 4358 2.085042 TTTGCTTTGGCGCTCATGCA 62.085 50.000 7.64 13.84 42.25 3.96
1348 4359 1.879737 TTGCTTTGGCGCTCATGCAT 61.880 50.000 7.64 0.00 42.25 3.96
1349 4360 1.876714 GCTTTGGCGCTCATGCATG 60.877 57.895 21.07 21.07 39.64 4.06
1405 4416 2.545810 ACTCTCCTTCCCTCCTTTCTG 58.454 52.381 0.00 0.00 0.00 3.02
1407 4418 0.915364 CTCCTTCCCTCCTTTCTGGG 59.085 60.000 0.00 0.00 44.66 4.45
1413 4424 1.253593 CCCTCCTTTCTGGGCTTTGC 61.254 60.000 0.00 0.00 36.61 3.68
1414 4425 1.589716 CCTCCTTTCTGGGCTTTGCG 61.590 60.000 0.00 0.00 36.20 4.85
1438 4449 1.038130 CCTACCACCACTAGCTCGCT 61.038 60.000 0.00 0.00 0.00 4.93
1439 4450 0.382515 CTACCACCACTAGCTCGCTC 59.617 60.000 0.00 0.00 0.00 5.03
1440 4451 1.374343 TACCACCACTAGCTCGCTCG 61.374 60.000 0.00 0.00 0.00 5.03
1441 4452 2.580867 CACCACTAGCTCGCTCGC 60.581 66.667 0.00 0.00 0.00 5.03
1442 4453 2.752238 ACCACTAGCTCGCTCGCT 60.752 61.111 0.00 2.17 43.83 4.93
1446 4457 3.947841 CTAGCTCGCTCGCTCGCT 61.948 66.667 0.00 6.93 41.30 4.93
1447 4458 3.855209 CTAGCTCGCTCGCTCGCTC 62.855 68.421 0.00 0.00 41.30 5.03
1462 4473 3.200593 CTCGCTGCTGCCATGGTC 61.201 66.667 14.67 6.41 35.36 4.02
1465 4476 3.807538 GCTGCTGCCATGGTCGTG 61.808 66.667 14.67 2.43 0.00 4.35
1466 4477 3.807538 CTGCTGCCATGGTCGTGC 61.808 66.667 14.67 12.74 0.00 5.34
1467 4478 4.334118 TGCTGCCATGGTCGTGCT 62.334 61.111 14.67 0.00 0.00 4.40
1468 4479 3.807538 GCTGCCATGGTCGTGCTG 61.808 66.667 14.67 3.56 0.00 4.41
1469 4480 2.359107 CTGCCATGGTCGTGCTGT 60.359 61.111 14.67 0.00 0.00 4.40
1470 4481 2.669229 TGCCATGGTCGTGCTGTG 60.669 61.111 14.67 0.00 0.00 3.66
1471 4482 4.107051 GCCATGGTCGTGCTGTGC 62.107 66.667 14.67 0.00 0.00 4.57
1472 4483 3.434319 CCATGGTCGTGCTGTGCC 61.434 66.667 2.57 0.00 0.00 5.01
1473 4484 3.792047 CATGGTCGTGCTGTGCCG 61.792 66.667 0.00 0.00 0.00 5.69
1480 4491 4.374702 GTGCTGTGCCGCTCGTTG 62.375 66.667 0.00 0.00 0.00 4.10
1483 4494 2.664851 CTGTGCCGCTCGTTGGAA 60.665 61.111 0.00 0.00 0.00 3.53
1484 4495 2.031919 TGTGCCGCTCGTTGGAAT 59.968 55.556 0.00 0.00 0.00 3.01
1485 4496 1.577328 CTGTGCCGCTCGTTGGAATT 61.577 55.000 0.00 0.00 0.00 2.17
1486 4497 1.154225 GTGCCGCTCGTTGGAATTG 60.154 57.895 0.00 0.00 0.00 2.32
1487 4498 2.331893 TGCCGCTCGTTGGAATTGG 61.332 57.895 0.00 0.00 0.00 3.16
1488 4499 2.038269 GCCGCTCGTTGGAATTGGA 61.038 57.895 0.00 0.00 0.00 3.53
1489 4500 1.376609 GCCGCTCGTTGGAATTGGAT 61.377 55.000 0.00 0.00 0.00 3.41
1490 4501 1.094785 CCGCTCGTTGGAATTGGATT 58.905 50.000 0.00 0.00 0.00 3.01
1491 4502 2.285083 CCGCTCGTTGGAATTGGATTA 58.715 47.619 0.00 0.00 0.00 1.75
1492 4503 2.680841 CCGCTCGTTGGAATTGGATTAA 59.319 45.455 0.00 0.00 0.00 1.40
1493 4504 3.486875 CCGCTCGTTGGAATTGGATTAAC 60.487 47.826 0.00 0.00 0.00 2.01
1494 4505 3.126171 CGCTCGTTGGAATTGGATTAACA 59.874 43.478 0.00 0.00 0.00 2.41
1495 4506 4.378978 CGCTCGTTGGAATTGGATTAACAA 60.379 41.667 0.00 0.00 34.41 2.83
1496 4507 5.465935 GCTCGTTGGAATTGGATTAACAAA 58.534 37.500 0.00 0.00 33.48 2.83
1497 4508 5.572896 GCTCGTTGGAATTGGATTAACAAAG 59.427 40.000 0.00 0.00 33.48 2.77
1498 4509 6.642707 TCGTTGGAATTGGATTAACAAAGT 57.357 33.333 0.00 0.00 33.48 2.66
1499 4510 6.674066 TCGTTGGAATTGGATTAACAAAGTC 58.326 36.000 0.00 0.00 33.48 3.01
1500 4511 6.488683 TCGTTGGAATTGGATTAACAAAGTCT 59.511 34.615 0.00 0.00 33.48 3.24
1501 4512 6.801862 CGTTGGAATTGGATTAACAAAGTCTC 59.198 38.462 0.00 0.00 33.48 3.36
1502 4513 7.521423 CGTTGGAATTGGATTAACAAAGTCTCA 60.521 37.037 0.00 0.00 33.48 3.27
1503 4514 8.306761 GTTGGAATTGGATTAACAAAGTCTCAT 58.693 33.333 0.00 0.00 33.48 2.90
1504 4515 7.829725 TGGAATTGGATTAACAAAGTCTCATG 58.170 34.615 0.00 0.00 33.48 3.07
1505 4516 7.451255 TGGAATTGGATTAACAAAGTCTCATGT 59.549 33.333 0.00 0.00 33.48 3.21
1506 4517 7.970614 GGAATTGGATTAACAAAGTCTCATGTC 59.029 37.037 0.00 0.00 33.48 3.06
1507 4518 8.408043 AATTGGATTAACAAAGTCTCATGTCA 57.592 30.769 0.00 0.00 33.48 3.58
1509 4520 6.533730 TGGATTAACAAAGTCTCATGTCAGT 58.466 36.000 0.00 0.00 0.00 3.41
1515 4526 3.758755 AAGTCTCATGTCAGTTCTGCA 57.241 42.857 0.00 0.00 0.00 4.41
1516 4527 3.037431 AGTCTCATGTCAGTTCTGCAC 57.963 47.619 0.00 0.00 0.00 4.57
1530 4541 3.046968 TCTGCACCGTGCTTAATTACA 57.953 42.857 23.52 0.53 45.31 2.41
1532 4543 3.373748 TCTGCACCGTGCTTAATTACATG 59.626 43.478 23.52 0.00 45.31 3.21
1533 4544 2.421775 TGCACCGTGCTTAATTACATGG 59.578 45.455 23.52 11.13 45.31 3.66
1537 4548 4.536364 CCGTGCTTAATTACATGGTGAG 57.464 45.455 0.00 0.00 38.03 3.51
1538 4549 3.312421 CCGTGCTTAATTACATGGTGAGG 59.688 47.826 0.00 0.00 38.03 3.86
1539 4550 3.938963 CGTGCTTAATTACATGGTGAGGT 59.061 43.478 0.00 0.00 0.00 3.85
1541 4552 5.583061 CGTGCTTAATTACATGGTGAGGTAA 59.417 40.000 0.00 0.00 33.12 2.85
1542 4553 6.092944 CGTGCTTAATTACATGGTGAGGTAAA 59.907 38.462 0.00 0.00 32.38 2.01
1543 4554 7.361371 CGTGCTTAATTACATGGTGAGGTAAAA 60.361 37.037 0.00 0.00 32.38 1.52
1544 4555 8.466798 GTGCTTAATTACATGGTGAGGTAAAAT 58.533 33.333 0.00 0.00 32.38 1.82
1545 4556 8.465999 TGCTTAATTACATGGTGAGGTAAAATG 58.534 33.333 0.00 0.00 32.38 2.32
1549 4560 6.489127 TTACATGGTGAGGTAAAATGAACG 57.511 37.500 0.00 0.00 0.00 3.95
1550 4561 4.394729 ACATGGTGAGGTAAAATGAACGT 58.605 39.130 0.00 0.00 0.00 3.99
1556 4569 6.646240 TGGTGAGGTAAAATGAACGTAGTAAC 59.354 38.462 0.00 0.00 45.00 2.50
1568 4581 8.813643 ATGAACGTAGTAACATATAAGAAGCC 57.186 34.615 0.00 0.00 45.00 4.35
1569 4582 6.914215 TGAACGTAGTAACATATAAGAAGCCG 59.086 38.462 0.00 0.00 45.00 5.52
1571 4584 7.031226 ACGTAGTAACATATAAGAAGCCGAA 57.969 36.000 0.00 0.00 41.94 4.30
1575 4588 7.190920 AGTAACATATAAGAAGCCGAAATGC 57.809 36.000 0.00 0.00 0.00 3.56
1587 4600 1.721389 CCGAAATGCCGATGAGATACG 59.279 52.381 0.00 0.00 0.00 3.06
1588 4601 2.394708 CGAAATGCCGATGAGATACGT 58.605 47.619 0.00 0.00 0.00 3.57
1589 4602 2.794910 CGAAATGCCGATGAGATACGTT 59.205 45.455 0.00 0.00 0.00 3.99
1590 4603 3.978855 CGAAATGCCGATGAGATACGTTA 59.021 43.478 0.00 0.00 0.00 3.18
1591 4604 4.443063 CGAAATGCCGATGAGATACGTTAA 59.557 41.667 0.00 0.00 0.00 2.01
1592 4605 5.387444 CGAAATGCCGATGAGATACGTTAAG 60.387 44.000 0.00 0.00 0.00 1.85
1593 4606 4.585955 ATGCCGATGAGATACGTTAAGT 57.414 40.909 0.00 0.00 0.00 2.24
1595 4608 4.852138 TGCCGATGAGATACGTTAAGTAC 58.148 43.478 0.00 0.00 38.29 2.73
1604 4617 2.745728 CGTTAAGTACGTGGCCCTG 58.254 57.895 0.00 0.00 45.14 4.45
1605 4618 0.738412 CGTTAAGTACGTGGCCCTGG 60.738 60.000 0.00 0.00 45.14 4.45
1606 4619 0.322648 GTTAAGTACGTGGCCCTGGT 59.677 55.000 0.00 0.00 0.00 4.00
1607 4620 1.058284 TTAAGTACGTGGCCCTGGTT 58.942 50.000 0.00 0.00 0.00 3.67
1608 4621 1.058284 TAAGTACGTGGCCCTGGTTT 58.942 50.000 0.00 0.00 0.00 3.27
1609 4622 0.250597 AAGTACGTGGCCCTGGTTTC 60.251 55.000 0.00 0.00 0.00 2.78
1610 4623 1.125711 AGTACGTGGCCCTGGTTTCT 61.126 55.000 0.00 0.00 0.00 2.52
1617 4630 0.467290 GGCCCTGGTTTCTGACACAA 60.467 55.000 0.00 0.00 0.00 3.33
1669 4686 6.279123 CACACTATGGACTACTCTACTCGTA 58.721 44.000 0.00 0.00 0.00 3.43
1676 4693 4.440250 GGACTACTCTACTCGTACGGTGTA 60.440 50.000 16.52 16.63 0.00 2.90
1702 4719 0.955905 ATGGTGCCACGTGGTTTAAC 59.044 50.000 33.92 24.73 37.57 2.01
1704 4721 0.820482 GGTGCCACGTGGTTTAACCT 60.820 55.000 33.92 0.00 39.58 3.50
1733 4750 4.544689 CGAGCAGGCGACGGAGAG 62.545 72.222 0.00 0.00 0.00 3.20
1785 4802 2.261671 CGGAGCAGCCTGTACGTT 59.738 61.111 0.00 0.00 0.00 3.99
2008 5025 2.363018 CCCTCGAGCTCTGGGTCA 60.363 66.667 25.10 0.64 39.68 4.02
2757 5782 2.221981 GCACAGACTTCAACTTTCCTCG 59.778 50.000 0.00 0.00 0.00 4.63
2800 5825 6.989437 TCATCAACGATTTTTATCTGACGAC 58.011 36.000 0.00 0.00 0.00 4.34
3089 6114 0.036388 GATCCCTGCACCTTCGACAA 60.036 55.000 0.00 0.00 0.00 3.18
3171 6196 3.012722 GGATTCCCCACCGACCCA 61.013 66.667 0.00 0.00 34.14 4.51
3258 6283 2.124612 TACGTCGAGGCCATCCGA 60.125 61.111 5.01 8.30 37.47 4.55
3475 6500 1.406065 CGACTCCATCCAGGCCATCT 61.406 60.000 5.01 0.00 37.29 2.90
3731 6759 4.560856 GATCGGTGCGCGCTCTCT 62.561 66.667 33.29 16.48 0.00 3.10
3736 6764 4.144681 GTGCGCGCTCTCTGCAAG 62.145 66.667 33.29 0.00 40.83 4.01
3741 6769 2.323580 GCGCTCTCTGCAAGCTTGT 61.324 57.895 26.55 0.00 43.06 3.16
3742 6770 1.786582 CGCTCTCTGCAAGCTTGTC 59.213 57.895 26.55 18.78 43.06 3.18
3743 6771 1.786582 GCTCTCTGCAAGCTTGTCG 59.213 57.895 26.55 17.53 42.31 4.35
3762 6814 3.737172 GCCATGTCGCCGTTTGCT 61.737 61.111 0.00 0.00 38.05 3.91
3787 6839 4.436998 GGCGTCCCACTCTCACCG 62.437 72.222 0.00 0.00 0.00 4.94
3790 6842 2.048127 GTCCCACTCTCACCGTGC 60.048 66.667 0.00 0.00 0.00 5.34
3791 6843 3.680786 TCCCACTCTCACCGTGCG 61.681 66.667 0.00 0.00 0.00 5.34
3792 6844 3.991051 CCCACTCTCACCGTGCGT 61.991 66.667 0.00 0.00 0.00 5.24
3856 6914 1.006571 GAACCTGAACGAGCGGTCA 60.007 57.895 15.89 10.44 39.84 4.02
4123 7181 4.459089 GTGGAGGACCTGCGAGGC 62.459 72.222 8.65 0.00 39.63 4.70
4277 7335 2.287668 ACTTGAGTCCGTTCTTCTGTCG 60.288 50.000 0.00 0.00 0.00 4.35
4295 7353 3.111098 GTCGCGTGAGGATTACGTAAAT 58.889 45.455 12.81 1.29 43.09 1.40
4334 7392 3.201930 TGATTGGCTGGCTGGATACTTTA 59.798 43.478 2.00 0.00 37.61 1.85
4337 7395 2.509548 TGGCTGGCTGGATACTTTACAT 59.490 45.455 2.00 0.00 37.61 2.29
4339 7397 3.316308 GGCTGGCTGGATACTTTACATTG 59.684 47.826 0.00 0.00 37.61 2.82
4340 7398 4.199310 GCTGGCTGGATACTTTACATTGA 58.801 43.478 0.00 0.00 37.61 2.57
4443 7554 1.669604 TCCAAGCGCACTTTGTTGTA 58.330 45.000 11.47 0.00 32.29 2.41
4444 7555 1.332375 TCCAAGCGCACTTTGTTGTAC 59.668 47.619 11.47 0.00 32.29 2.90
4445 7556 1.333619 CCAAGCGCACTTTGTTGTACT 59.666 47.619 11.47 0.00 32.29 2.73
4446 7557 2.602217 CCAAGCGCACTTTGTTGTACTC 60.602 50.000 11.47 0.00 32.29 2.59
4447 7558 1.226746 AGCGCACTTTGTTGTACTCC 58.773 50.000 11.47 0.00 0.00 3.85
4448 7559 0.237498 GCGCACTTTGTTGTACTCCC 59.763 55.000 0.30 0.00 0.00 4.30
4449 7560 1.878953 CGCACTTTGTTGTACTCCCT 58.121 50.000 0.00 0.00 0.00 4.20
4450 7561 1.798813 CGCACTTTGTTGTACTCCCTC 59.201 52.381 0.00 0.00 0.00 4.30
4451 7562 2.548067 CGCACTTTGTTGTACTCCCTCT 60.548 50.000 0.00 0.00 0.00 3.69
4452 7563 2.808543 GCACTTTGTTGTACTCCCTCTG 59.191 50.000 0.00 0.00 0.00 3.35
4453 7564 3.744530 GCACTTTGTTGTACTCCCTCTGT 60.745 47.826 0.00 0.00 0.00 3.41
4454 7565 4.058817 CACTTTGTTGTACTCCCTCTGTC 58.941 47.826 0.00 0.00 0.00 3.51
4455 7566 3.071167 ACTTTGTTGTACTCCCTCTGTCC 59.929 47.826 0.00 0.00 0.00 4.02
4456 7567 1.254026 TGTTGTACTCCCTCTGTCCG 58.746 55.000 0.00 0.00 0.00 4.79
4457 7568 0.531200 GTTGTACTCCCTCTGTCCGG 59.469 60.000 0.00 0.00 0.00 5.14
4458 7569 0.406750 TTGTACTCCCTCTGTCCGGA 59.593 55.000 0.00 0.00 0.00 5.14
4459 7570 0.406750 TGTACTCCCTCTGTCCGGAA 59.593 55.000 5.23 0.00 0.00 4.30
4460 7571 1.203087 TGTACTCCCTCTGTCCGGAAA 60.203 52.381 5.23 0.00 0.00 3.13
4461 7572 2.108970 GTACTCCCTCTGTCCGGAAAT 58.891 52.381 5.23 0.00 0.00 2.17
4462 7573 2.544844 ACTCCCTCTGTCCGGAAATA 57.455 50.000 5.23 0.00 0.00 1.40
4463 7574 2.108970 ACTCCCTCTGTCCGGAAATAC 58.891 52.381 5.23 0.00 0.00 1.89
4464 7575 2.292323 ACTCCCTCTGTCCGGAAATACT 60.292 50.000 5.23 0.00 0.00 2.12
4465 7576 2.766828 CTCCCTCTGTCCGGAAATACTT 59.233 50.000 5.23 0.00 0.00 2.24
4466 7577 2.500098 TCCCTCTGTCCGGAAATACTTG 59.500 50.000 5.23 0.00 0.00 3.16
4467 7578 2.236395 CCCTCTGTCCGGAAATACTTGT 59.764 50.000 5.23 0.00 0.00 3.16
4468 7579 3.307480 CCCTCTGTCCGGAAATACTTGTT 60.307 47.826 5.23 0.00 0.00 2.83
4469 7580 3.684788 CCTCTGTCCGGAAATACTTGTTG 59.315 47.826 5.23 0.00 0.00 3.33
4470 7581 3.670625 TCTGTCCGGAAATACTTGTTGG 58.329 45.455 5.23 0.00 0.00 3.77
4471 7582 3.325425 TCTGTCCGGAAATACTTGTTGGA 59.675 43.478 5.23 0.00 0.00 3.53
4472 7583 3.670625 TGTCCGGAAATACTTGTTGGAG 58.329 45.455 5.23 0.00 0.00 3.86
4473 7584 3.325425 TGTCCGGAAATACTTGTTGGAGA 59.675 43.478 5.23 0.00 0.00 3.71
4474 7585 4.202377 TGTCCGGAAATACTTGTTGGAGAA 60.202 41.667 5.23 0.00 0.00 2.87
4475 7586 4.758165 GTCCGGAAATACTTGTTGGAGAAA 59.242 41.667 5.23 0.00 0.00 2.52
4476 7587 5.414765 GTCCGGAAATACTTGTTGGAGAAAT 59.585 40.000 5.23 0.00 0.00 2.17
4477 7588 6.596497 GTCCGGAAATACTTGTTGGAGAAATA 59.404 38.462 5.23 0.00 0.00 1.40
4478 7589 6.596497 TCCGGAAATACTTGTTGGAGAAATAC 59.404 38.462 0.00 0.00 0.00 1.89
4479 7590 6.373216 CCGGAAATACTTGTTGGAGAAATACA 59.627 38.462 0.00 0.00 0.00 2.29
4480 7591 7.067008 CCGGAAATACTTGTTGGAGAAATACAT 59.933 37.037 0.00 0.00 0.00 2.29
4481 7592 9.104965 CGGAAATACTTGTTGGAGAAATACATA 57.895 33.333 0.00 0.00 0.00 2.29
4531 7642 6.865834 ACATCTAGATACATCCAATCCTCC 57.134 41.667 4.54 0.00 0.00 4.30
4532 7643 5.420421 ACATCTAGATACATCCAATCCTCCG 59.580 44.000 4.54 0.00 0.00 4.63
4533 7644 5.256806 TCTAGATACATCCAATCCTCCGA 57.743 43.478 0.00 0.00 0.00 4.55
4534 7645 5.010933 TCTAGATACATCCAATCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
4535 7646 2.558795 AGATACATCCAATCCTCCGACG 59.441 50.000 0.00 0.00 0.00 5.12
4536 7647 2.061509 TACATCCAATCCTCCGACGA 57.938 50.000 0.00 0.00 0.00 4.20
4537 7648 0.747255 ACATCCAATCCTCCGACGAG 59.253 55.000 0.00 0.00 35.72 4.18
4538 7649 0.747255 CATCCAATCCTCCGACGAGT 59.253 55.000 0.00 0.00 33.93 4.18
4539 7650 1.954382 CATCCAATCCTCCGACGAGTA 59.046 52.381 0.00 0.00 33.93 2.59
4540 7651 2.359981 TCCAATCCTCCGACGAGTAT 57.640 50.000 0.00 0.00 33.93 2.12
4541 7652 2.662866 TCCAATCCTCCGACGAGTATT 58.337 47.619 0.00 0.00 33.93 1.89
4542 7653 3.028850 TCCAATCCTCCGACGAGTATTT 58.971 45.455 0.00 0.00 33.93 1.40
4543 7654 3.067742 TCCAATCCTCCGACGAGTATTTC 59.932 47.826 0.00 0.00 33.93 2.17
4544 7655 3.381949 CAATCCTCCGACGAGTATTTCC 58.618 50.000 0.00 0.00 33.93 3.13
4545 7656 1.019673 TCCTCCGACGAGTATTTCCG 58.980 55.000 0.00 0.00 33.93 4.30
4546 7657 0.030369 CCTCCGACGAGTATTTCCGG 59.970 60.000 0.00 0.00 41.36 5.14
4547 7658 1.019673 CTCCGACGAGTATTTCCGGA 58.980 55.000 0.00 0.00 45.74 5.14
4548 7659 0.734889 TCCGACGAGTATTTCCGGAC 59.265 55.000 1.83 0.00 43.47 4.79
4549 7660 0.590732 CCGACGAGTATTTCCGGACG 60.591 60.000 1.83 5.89 42.49 4.79
4550 7661 0.590732 CGACGAGTATTTCCGGACGG 60.591 60.000 1.83 3.96 0.00 4.79
4551 7662 0.734889 GACGAGTATTTCCGGACGGA 59.265 55.000 1.83 9.76 43.52 4.69
4552 7663 0.737219 ACGAGTATTTCCGGACGGAG 59.263 55.000 13.64 3.15 46.06 4.63
4553 7664 0.030369 CGAGTATTTCCGGACGGAGG 59.970 60.000 13.64 0.00 46.06 4.30
4554 7665 0.388294 GAGTATTTCCGGACGGAGGG 59.612 60.000 13.64 0.00 46.06 4.30
4555 7666 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4556 7667 0.826062 GTATTTCCGGACGGAGGGAA 59.174 55.000 13.64 6.20 46.06 3.97
4557 7668 1.415289 GTATTTCCGGACGGAGGGAAT 59.585 52.381 13.64 12.81 46.06 3.01
4558 7669 1.797320 ATTTCCGGACGGAGGGAATA 58.203 50.000 13.64 0.00 46.06 1.75
4559 7670 1.797320 TTTCCGGACGGAGGGAATAT 58.203 50.000 13.64 0.00 46.06 1.28
4560 7671 1.335145 TTCCGGACGGAGGGAATATC 58.665 55.000 13.64 0.00 46.06 1.63
4561 7672 0.186630 TCCGGACGGAGGGAATATCA 59.813 55.000 9.76 0.00 39.76 2.15
4562 7673 0.317479 CCGGACGGAGGGAATATCAC 59.683 60.000 4.40 0.00 37.50 3.06
4563 7674 0.317479 CGGACGGAGGGAATATCACC 59.683 60.000 0.00 0.00 0.00 4.02
4565 7676 1.325355 GACGGAGGGAATATCACCGA 58.675 55.000 0.00 0.00 45.31 4.69
4566 7677 1.269998 GACGGAGGGAATATCACCGAG 59.730 57.143 0.00 0.00 45.31 4.63
4567 7678 1.329256 CGGAGGGAATATCACCGAGT 58.671 55.000 0.00 0.00 45.31 4.18
4568 7679 2.158564 ACGGAGGGAATATCACCGAGTA 60.159 50.000 0.00 0.00 45.31 2.59
4569 7680 2.488545 CGGAGGGAATATCACCGAGTAG 59.511 54.545 0.00 0.00 45.31 2.57
4570 7681 3.764218 GGAGGGAATATCACCGAGTAGA 58.236 50.000 0.00 0.00 0.00 2.59
4571 7682 4.345854 GGAGGGAATATCACCGAGTAGAT 58.654 47.826 0.00 0.00 0.00 1.98
4572 7683 4.158764 GGAGGGAATATCACCGAGTAGATG 59.841 50.000 0.00 0.00 0.00 2.90
4573 7684 3.511934 AGGGAATATCACCGAGTAGATGC 59.488 47.826 0.00 0.00 0.00 3.91
4574 7685 3.502920 GGAATATCACCGAGTAGATGCG 58.497 50.000 0.00 0.00 0.00 4.73
4575 7686 3.190744 GGAATATCACCGAGTAGATGCGA 59.809 47.826 0.00 0.00 0.00 5.10
4576 7687 4.407818 GAATATCACCGAGTAGATGCGAG 58.592 47.826 0.00 0.00 0.00 5.03
4577 7688 1.681538 ATCACCGAGTAGATGCGAGT 58.318 50.000 0.00 0.00 0.00 4.18
4578 7689 0.733150 TCACCGAGTAGATGCGAGTG 59.267 55.000 0.00 0.00 33.26 3.51
4579 7690 0.248661 CACCGAGTAGATGCGAGTGG 60.249 60.000 0.00 0.00 0.00 4.00
4580 7691 0.680280 ACCGAGTAGATGCGAGTGGT 60.680 55.000 0.00 0.00 0.00 4.16
4581 7692 0.456221 CCGAGTAGATGCGAGTGGTT 59.544 55.000 0.00 0.00 0.00 3.67
4582 7693 1.550065 CGAGTAGATGCGAGTGGTTG 58.450 55.000 0.00 0.00 0.00 3.77
4583 7694 1.799181 CGAGTAGATGCGAGTGGTTGG 60.799 57.143 0.00 0.00 0.00 3.77
4584 7695 0.108138 AGTAGATGCGAGTGGTTGGC 60.108 55.000 0.00 0.00 0.00 4.52
4585 7696 0.108138 GTAGATGCGAGTGGTTGGCT 60.108 55.000 0.00 0.00 0.00 4.75
4586 7697 1.136305 GTAGATGCGAGTGGTTGGCTA 59.864 52.381 0.00 0.00 0.00 3.93
4587 7698 0.613260 AGATGCGAGTGGTTGGCTAA 59.387 50.000 0.00 0.00 0.00 3.09
4588 7699 1.003118 AGATGCGAGTGGTTGGCTAAA 59.997 47.619 0.00 0.00 0.00 1.85
4589 7700 2.017049 GATGCGAGTGGTTGGCTAAAT 58.983 47.619 0.00 0.00 0.00 1.40
4590 7701 1.904287 TGCGAGTGGTTGGCTAAATT 58.096 45.000 0.00 0.00 0.00 1.82
4591 7702 3.060736 TGCGAGTGGTTGGCTAAATTA 57.939 42.857 0.00 0.00 0.00 1.40
4592 7703 3.616219 TGCGAGTGGTTGGCTAAATTAT 58.384 40.909 0.00 0.00 0.00 1.28
4593 7704 4.013728 TGCGAGTGGTTGGCTAAATTATT 58.986 39.130 0.00 0.00 0.00 1.40
4594 7705 4.142491 TGCGAGTGGTTGGCTAAATTATTG 60.142 41.667 0.00 0.00 0.00 1.90
4595 7706 4.142469 GCGAGTGGTTGGCTAAATTATTGT 60.142 41.667 0.00 0.00 0.00 2.71
4596 7707 5.065474 GCGAGTGGTTGGCTAAATTATTGTA 59.935 40.000 0.00 0.00 0.00 2.41
4597 7708 6.483687 CGAGTGGTTGGCTAAATTATTGTAC 58.516 40.000 0.00 0.00 0.00 2.90
4598 7709 6.315393 CGAGTGGTTGGCTAAATTATTGTACT 59.685 38.462 0.00 0.00 0.00 2.73
4599 7710 7.493320 CGAGTGGTTGGCTAAATTATTGTACTA 59.507 37.037 0.00 0.00 0.00 1.82
4600 7711 9.338622 GAGTGGTTGGCTAAATTATTGTACTAT 57.661 33.333 0.00 0.00 0.00 2.12
4601 7712 9.338622 AGTGGTTGGCTAAATTATTGTACTATC 57.661 33.333 0.00 0.00 0.00 2.08
4602 7713 9.116067 GTGGTTGGCTAAATTATTGTACTATCA 57.884 33.333 0.00 0.00 0.00 2.15
4603 7714 9.688091 TGGTTGGCTAAATTATTGTACTATCAA 57.312 29.630 0.00 0.00 0.00 2.57
4615 7726 9.784680 TTATTGTACTATCAAAGAAGAGTCGTC 57.215 33.333 0.00 0.00 0.00 4.20
4616 7727 7.450124 TTGTACTATCAAAGAAGAGTCGTCT 57.550 36.000 2.39 2.39 32.81 4.18
4617 7728 7.074507 TGTACTATCAAAGAAGAGTCGTCTC 57.925 40.000 9.13 1.04 40.70 3.36
4618 7729 6.653740 TGTACTATCAAAGAAGAGTCGTCTCA 59.346 38.462 9.13 0.00 42.66 3.27
4619 7730 6.767524 ACTATCAAAGAAGAGTCGTCTCAT 57.232 37.500 9.13 0.00 42.66 2.90
4620 7731 6.559810 ACTATCAAAGAAGAGTCGTCTCATG 58.440 40.000 9.13 11.22 42.66 3.07
4621 7732 5.651387 ATCAAAGAAGAGTCGTCTCATGA 57.349 39.130 19.40 19.40 42.66 3.07
4622 7733 5.053140 TCAAAGAAGAGTCGTCTCATGAG 57.947 43.478 17.07 17.07 42.66 2.90
4623 7734 4.762251 TCAAAGAAGAGTCGTCTCATGAGA 59.238 41.667 21.67 21.67 42.66 3.27
4624 7735 5.417266 TCAAAGAAGAGTCGTCTCATGAGAT 59.583 40.000 27.51 12.41 42.66 2.75
4625 7736 5.499139 AAGAAGAGTCGTCTCATGAGATC 57.501 43.478 27.51 20.00 42.66 2.75
4626 7737 4.522114 AGAAGAGTCGTCTCATGAGATCA 58.478 43.478 27.51 14.66 42.66 2.92
4627 7738 4.946772 AGAAGAGTCGTCTCATGAGATCAA 59.053 41.667 27.51 13.59 42.66 2.57
4628 7739 4.630894 AGAGTCGTCTCATGAGATCAAC 57.369 45.455 27.51 22.73 42.66 3.18
4629 7740 4.013050 AGAGTCGTCTCATGAGATCAACA 58.987 43.478 27.51 8.11 42.66 3.33
4630 7741 4.096231 AGAGTCGTCTCATGAGATCAACAG 59.904 45.833 27.51 14.56 42.66 3.16
4631 7742 3.130164 AGTCGTCTCATGAGATCAACAGG 59.870 47.826 27.51 10.47 39.97 4.00
4632 7743 2.159184 TCGTCTCATGAGATCAACAGGC 60.159 50.000 27.51 11.55 39.97 4.85
4633 7744 2.200067 GTCTCATGAGATCAACAGGCG 58.800 52.381 27.51 0.00 39.97 5.52
4634 7745 1.827344 TCTCATGAGATCAACAGGCGT 59.173 47.619 21.67 0.00 31.41 5.68
4635 7746 1.931841 CTCATGAGATCAACAGGCGTG 59.068 52.381 18.34 4.53 0.00 5.34
4636 7747 1.012086 CATGAGATCAACAGGCGTGG 58.988 55.000 11.67 0.00 0.00 4.94
4637 7748 0.904649 ATGAGATCAACAGGCGTGGA 59.095 50.000 11.67 0.00 0.00 4.02
4638 7749 0.904649 TGAGATCAACAGGCGTGGAT 59.095 50.000 11.67 4.65 38.60 3.41
4639 7750 1.278985 TGAGATCAACAGGCGTGGATT 59.721 47.619 11.67 0.00 35.81 3.01
4640 7751 2.290260 TGAGATCAACAGGCGTGGATTT 60.290 45.455 11.67 0.16 35.81 2.17
4641 7752 3.055458 TGAGATCAACAGGCGTGGATTTA 60.055 43.478 11.67 0.00 35.81 1.40
4642 7753 4.130118 GAGATCAACAGGCGTGGATTTAT 58.870 43.478 11.67 0.00 35.81 1.40
4643 7754 4.526970 AGATCAACAGGCGTGGATTTATT 58.473 39.130 11.67 0.00 35.81 1.40
4644 7755 4.336433 AGATCAACAGGCGTGGATTTATTG 59.664 41.667 11.67 5.21 35.81 1.90
4645 7756 3.417101 TCAACAGGCGTGGATTTATTGT 58.583 40.909 11.67 0.00 0.00 2.71
4646 7757 4.580868 TCAACAGGCGTGGATTTATTGTA 58.419 39.130 11.67 0.00 0.00 2.41
4647 7758 4.393680 TCAACAGGCGTGGATTTATTGTAC 59.606 41.667 11.67 0.00 0.00 2.90
4648 7759 3.945346 ACAGGCGTGGATTTATTGTACA 58.055 40.909 11.67 0.00 0.00 2.90
4649 7760 4.523083 ACAGGCGTGGATTTATTGTACAT 58.477 39.130 11.67 0.00 0.00 2.29
4650 7761 4.947388 ACAGGCGTGGATTTATTGTACATT 59.053 37.500 11.67 0.00 0.00 2.71
4651 7762 6.116806 ACAGGCGTGGATTTATTGTACATTA 58.883 36.000 11.67 0.00 0.00 1.90
4652 7763 6.260050 ACAGGCGTGGATTTATTGTACATTAG 59.740 38.462 11.67 0.00 0.00 1.73
4653 7764 6.481976 CAGGCGTGGATTTATTGTACATTAGA 59.518 38.462 0.00 0.00 0.00 2.10
4654 7765 6.482308 AGGCGTGGATTTATTGTACATTAGAC 59.518 38.462 0.00 0.00 0.00 2.59
4655 7766 6.352526 GCGTGGATTTATTGTACATTAGACG 58.647 40.000 0.00 4.28 0.00 4.18
4656 7767 6.019318 GCGTGGATTTATTGTACATTAGACGT 60.019 38.462 0.00 0.00 0.00 4.34
4657 7768 7.464977 GCGTGGATTTATTGTACATTAGACGTT 60.465 37.037 0.00 0.00 0.00 3.99
4658 7769 8.385111 CGTGGATTTATTGTACATTAGACGTTT 58.615 33.333 0.00 0.00 0.00 3.60
4677 7788 9.715121 AGACGTTTACATTTCTTATAAGGTTCA 57.285 29.630 12.54 0.00 0.00 3.18
4685 7796 9.753674 ACATTTCTTATAAGGTTCAAATCCAGA 57.246 29.630 12.54 0.00 0.00 3.86
4736 7847 4.881319 GCATACAAAGCGCAATTTTTACC 58.119 39.130 11.47 0.00 0.00 2.85
4737 7848 4.625311 GCATACAAAGCGCAATTTTTACCT 59.375 37.500 11.47 0.00 0.00 3.08
4738 7849 5.120053 GCATACAAAGCGCAATTTTTACCTT 59.880 36.000 11.47 0.00 0.00 3.50
4741 7852 5.112686 ACAAAGCGCAATTTTTACCTTTGA 58.887 33.333 11.47 0.00 40.73 2.69
4742 7853 5.582665 ACAAAGCGCAATTTTTACCTTTGAA 59.417 32.000 11.47 0.00 40.73 2.69
4743 7854 5.905480 AAGCGCAATTTTTACCTTTGAAG 57.095 34.783 11.47 0.00 0.00 3.02
4777 7891 6.721208 GGATAAAATGATATGGAAGGCTTGGA 59.279 38.462 3.46 0.00 0.00 3.53
4783 7897 1.376649 ATGGAAGGCTTGGACTCCTT 58.623 50.000 3.46 0.00 44.80 3.36
4811 7927 2.430332 TCAAGTTCTTTGCTTGGTTGGG 59.570 45.455 5.39 0.00 42.44 4.12
4858 7974 0.251916 TAGATTGGCGAAGTGTGGGG 59.748 55.000 0.00 0.00 0.00 4.96
4880 7996 0.468029 CCCAACTGTGGTCTTTGCCT 60.468 55.000 0.00 0.00 44.30 4.75
4883 7999 1.338020 CAACTGTGGTCTTTGCCTTCC 59.662 52.381 0.00 0.00 0.00 3.46
4894 8010 3.650942 TCTTTGCCTTCCCTGTAAGAGAA 59.349 43.478 0.00 0.00 34.07 2.87
4920 8036 5.642919 GCAAGAATGTGAGTCTCATCTCTTT 59.357 40.000 19.07 5.85 35.68 2.52
4938 8054 2.323939 TTTTCAAATGCCGCTACACG 57.676 45.000 0.00 0.00 43.15 4.49
4994 8110 0.608640 ATTCTCGGACTTGACGCCTT 59.391 50.000 0.00 0.00 0.00 4.35
5008 8124 2.676471 CCTTCGGTTGGCCCTTGG 60.676 66.667 0.00 0.00 0.00 3.61
5010 8126 1.530655 CTTCGGTTGGCCCTTGGTT 60.531 57.895 0.00 0.00 0.00 3.67
5032 8148 0.397941 CTCAGTTGAGGCTTGGTGGA 59.602 55.000 1.09 0.00 38.48 4.02
5121 8237 3.109619 GACTATCTGGAACGAGCGAAAG 58.890 50.000 0.00 0.00 0.00 2.62
5149 8265 0.520404 CTTCAAGCACAAGAGCGCAT 59.480 50.000 11.47 0.00 40.15 4.73
5259 8375 5.199000 CGAGAGTAATCTCATGTCGTGTAC 58.801 45.833 19.38 0.00 42.66 2.90
5260 8376 5.006844 CGAGAGTAATCTCATGTCGTGTACT 59.993 44.000 19.38 0.00 42.66 2.73
5261 8377 6.457122 CGAGAGTAATCTCATGTCGTGTACTT 60.457 42.308 19.38 0.00 42.66 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 6.313411 TGAAAGGCTCACATTTTGAACAAAAG 59.687 34.615 15.92 11.20 42.72 2.27
36 38 7.054491 ACAAACTTATGAAAGGCTCACATTT 57.946 32.000 10.67 0.00 36.69 2.32
86 88 2.223735 ACAACGACACGTCTCAATGAGT 60.224 45.455 10.36 0.00 39.99 3.41
90 92 1.067974 TCCACAACGACACGTCTCAAT 59.932 47.619 0.00 0.00 39.99 2.57
103 105 2.036006 TAACGGCGCCATCCACAAC 61.036 57.895 28.98 0.00 0.00 3.32
104 106 2.036006 GTAACGGCGCCATCCACAA 61.036 57.895 28.98 0.32 0.00 3.33
105 107 2.435234 GTAACGGCGCCATCCACA 60.435 61.111 28.98 1.13 0.00 4.17
144 149 4.153117 GGCCGCATTCTACATAGATTCTTG 59.847 45.833 0.00 0.00 31.40 3.02
164 170 3.646736 AACCTCACTAACCATAAGGCC 57.353 47.619 0.00 0.00 39.06 5.19
171 177 4.447138 AATGGACAAACCTCACTAACCA 57.553 40.909 0.00 0.00 39.86 3.67
178 184 3.221771 CCAGACAAATGGACAAACCTCA 58.778 45.455 0.00 0.00 43.57 3.86
188 194 1.408340 TGCAACACACCAGACAAATGG 59.592 47.619 0.00 0.00 46.47 3.16
242 3206 6.313905 AGTCTCATGCCTATACAAAAGAAACG 59.686 38.462 0.00 0.00 0.00 3.60
273 3237 3.390311 CCTCTGTCATCCATCATGAAGGA 59.610 47.826 21.27 21.27 43.52 3.36
322 3289 1.875576 GCCAAGAGGATGGAGCATACG 60.876 57.143 0.00 0.00 43.54 3.06
339 3306 0.911053 TGAGATGGTGTAGCATGCCA 59.089 50.000 15.66 4.89 36.64 4.92
343 3313 4.458397 CAAGGAATGAGATGGTGTAGCAT 58.542 43.478 0.00 0.00 0.00 3.79
346 3316 3.813443 CCCAAGGAATGAGATGGTGTAG 58.187 50.000 0.00 0.00 0.00 2.74
351 3321 0.259647 TGGCCCAAGGAATGAGATGG 59.740 55.000 0.00 0.00 0.00 3.51
498 3495 7.429633 CCGTTATTAGATGATCTATAGGCCAG 58.570 42.308 5.01 0.00 0.00 4.85
540 3537 0.937304 TCTTGTTTGCGACTGAGTGC 59.063 50.000 0.00 0.00 0.00 4.40
564 3561 3.412386 GTGGGTTAGTGTCAATGCTTCT 58.588 45.455 0.00 0.00 0.00 2.85
565 3562 2.488153 GGTGGGTTAGTGTCAATGCTTC 59.512 50.000 0.00 0.00 0.00 3.86
566 3563 2.158534 TGGTGGGTTAGTGTCAATGCTT 60.159 45.455 0.00 0.00 0.00 3.91
567 3564 1.423541 TGGTGGGTTAGTGTCAATGCT 59.576 47.619 0.00 0.00 0.00 3.79
568 3565 1.904287 TGGTGGGTTAGTGTCAATGC 58.096 50.000 0.00 0.00 0.00 3.56
569 3566 3.684908 TGATGGTGGGTTAGTGTCAATG 58.315 45.455 0.00 0.00 0.00 2.82
582 3579 1.153289 CCTCGCCTCTTGATGGTGG 60.153 63.158 0.00 0.00 35.90 4.61
585 3582 2.203126 GGCCTCGCCTCTTGATGG 60.203 66.667 0.00 0.00 46.69 3.51
597 3594 4.336713 GTCATCCAAGAAACATTAGGCCTC 59.663 45.833 9.68 0.00 0.00 4.70
599 3596 4.273318 AGTCATCCAAGAAACATTAGGCC 58.727 43.478 0.00 0.00 0.00 5.19
619 3616 6.147864 TGCTTAATTGCTCAAAGTTCAAGT 57.852 33.333 0.00 0.00 0.00 3.16
630 3627 5.573337 AGAAAGTCCATGCTTAATTGCTC 57.427 39.130 0.00 0.00 0.00 4.26
652 3649 0.035915 TAGGCATTGCTGTTGGCGTA 60.036 50.000 8.82 0.00 45.43 4.42
686 3683 2.044946 AGCGTGGAGGAAATGGCC 60.045 61.111 0.00 0.00 0.00 5.36
762 3759 2.380571 ATTCCCCACCGGTTTTGGCT 62.381 55.000 2.97 0.00 32.13 4.75
793 3790 4.219999 GAGAGAGCAGAGCCGGCC 62.220 72.222 26.15 15.34 0.00 6.13
794 3791 4.219999 GGAGAGAGCAGAGCCGGC 62.220 72.222 21.89 21.89 0.00 6.13
795 3792 3.535962 GGGAGAGAGCAGAGCCGG 61.536 72.222 0.00 0.00 0.00 6.13
796 3793 3.535962 GGGGAGAGAGCAGAGCCG 61.536 72.222 0.00 0.00 0.00 5.52
889 3886 2.126596 CACACACTGGCTTGCCCAA 61.127 57.895 9.35 0.00 44.81 4.12
1046 4055 4.487412 GGACGCCGTGGAGGTACG 62.487 72.222 0.00 0.00 43.70 3.67
1133 4142 4.328712 GTGTGCACACATGTAACGATCATA 59.671 41.667 38.42 1.03 45.75 2.15
1134 4143 3.125146 GTGTGCACACATGTAACGATCAT 59.875 43.478 38.42 0.00 45.75 2.45
1135 4144 2.478514 GTGTGCACACATGTAACGATCA 59.521 45.455 38.42 2.23 45.75 2.92
1157 4167 4.998024 TGGCATTTGCACGCACGC 62.998 61.111 4.74 0.00 44.36 5.34
1158 4168 3.098958 GTGGCATTTGCACGCACG 61.099 61.111 4.74 0.00 44.36 5.34
1160 4170 2.335729 CTGTGGCATTTGCACGCA 59.664 55.556 4.74 6.08 44.36 5.24
1161 4171 3.107661 GCTGTGGCATTTGCACGC 61.108 61.111 4.74 1.81 44.36 5.34
1162 4172 2.335729 TGCTGTGGCATTTGCACG 59.664 55.556 4.74 0.00 44.28 5.34
1171 4181 2.437359 AAGCGAGGATGCTGTGGC 60.437 61.111 0.00 0.00 46.60 5.01
1172 4182 1.078918 TGAAGCGAGGATGCTGTGG 60.079 57.895 0.00 0.00 46.60 4.17
1173 4183 0.390866 AGTGAAGCGAGGATGCTGTG 60.391 55.000 0.00 0.00 46.60 3.66
1174 4184 0.322975 AAGTGAAGCGAGGATGCTGT 59.677 50.000 0.00 0.00 46.60 4.40
1175 4185 0.725686 CAAGTGAAGCGAGGATGCTG 59.274 55.000 0.00 0.00 46.60 4.41
1177 4187 1.129437 GAACAAGTGAAGCGAGGATGC 59.871 52.381 0.00 0.00 0.00 3.91
1178 4188 2.693069 AGAACAAGTGAAGCGAGGATG 58.307 47.619 0.00 0.00 0.00 3.51
1179 4189 3.007398 AGAAGAACAAGTGAAGCGAGGAT 59.993 43.478 0.00 0.00 0.00 3.24
1218 4228 2.041686 ACGAGACGGAGCTGAGGAC 61.042 63.158 0.00 0.00 0.00 3.85
1224 4234 2.597805 ACACCACGAGACGGAGCT 60.598 61.111 0.00 0.00 0.00 4.09
1226 4236 2.083835 AACCACACCACGAGACGGAG 62.084 60.000 0.00 0.00 0.00 4.63
1227 4237 2.079020 GAACCACACCACGAGACGGA 62.079 60.000 0.00 0.00 0.00 4.69
1229 4239 2.014554 CGAACCACACCACGAGACG 61.015 63.158 0.00 0.00 0.00 4.18
1231 4241 1.361271 GTCGAACCACACCACGAGA 59.639 57.895 0.00 0.00 35.52 4.04
1232 4242 1.663702 GGTCGAACCACACCACGAG 60.664 63.158 0.00 0.00 38.42 4.18
1233 4243 2.129146 AGGTCGAACCACACCACGA 61.129 57.895 0.00 0.00 41.95 4.35
1235 4245 2.251642 GCAGGTCGAACCACACCAC 61.252 63.158 0.00 0.00 41.95 4.16
1236 4246 2.050836 ATGCAGGTCGAACCACACCA 62.051 55.000 0.00 0.00 41.95 4.17
1237 4247 1.302511 ATGCAGGTCGAACCACACC 60.303 57.895 0.00 0.00 41.95 4.16
1238 4248 1.868997 CATGCAGGTCGAACCACAC 59.131 57.895 0.00 0.00 41.95 3.82
1239 4249 1.965930 GCATGCAGGTCGAACCACA 60.966 57.895 14.21 0.00 41.95 4.17
1242 4253 3.499737 CGGCATGCAGGTCGAACC 61.500 66.667 22.41 0.00 38.35 3.62
1248 4259 2.672996 GGTGAACGGCATGCAGGT 60.673 61.111 21.96 16.30 0.00 4.00
1285 4296 3.506810 CTCGAACGATCAGAAGCTTCTT 58.493 45.455 26.44 13.47 34.74 2.52
1295 4306 2.288186 CACTAGCTAGCTCGAACGATCA 59.712 50.000 23.26 0.00 0.00 2.92
1302 4313 2.835705 GCGCCACTAGCTAGCTCGA 61.836 63.158 23.26 3.28 40.39 4.04
1308 4319 4.207281 CTGCGGCGCCACTAGCTA 62.207 66.667 30.82 6.78 40.39 3.32
1323 4334 0.386478 GAGCGCCAAAGCAAAGACTG 60.386 55.000 2.29 0.00 39.83 3.51
1326 4337 0.241749 CATGAGCGCCAAAGCAAAGA 59.758 50.000 2.29 0.00 39.83 2.52
1365 4376 2.990066 ATCCTTGACGTCCAATCCTC 57.010 50.000 14.12 0.00 33.68 3.71
1366 4377 3.375699 AGTATCCTTGACGTCCAATCCT 58.624 45.455 14.12 0.00 33.68 3.24
1369 4380 3.385111 GGAGAGTATCCTTGACGTCCAAT 59.615 47.826 14.12 3.85 45.64 3.16
1395 4406 1.589716 CGCAAAGCCCAGAAAGGAGG 61.590 60.000 0.00 0.00 41.22 4.30
1396 4407 0.606401 TCGCAAAGCCCAGAAAGGAG 60.606 55.000 0.00 0.00 41.22 3.69
1405 4416 1.095807 GGTAGGTGATCGCAAAGCCC 61.096 60.000 8.82 0.00 0.00 5.19
1407 4418 0.727398 GTGGTAGGTGATCGCAAAGC 59.273 55.000 8.82 5.55 0.00 3.51
1413 4424 1.067212 GCTAGTGGTGGTAGGTGATCG 59.933 57.143 0.00 0.00 0.00 3.69
1414 4425 2.362717 GAGCTAGTGGTGGTAGGTGATC 59.637 54.545 0.00 0.00 0.00 2.92
1448 4459 3.807538 CACGACCATGGCAGCAGC 61.808 66.667 13.04 0.00 41.10 5.25
1449 4460 3.807538 GCACGACCATGGCAGCAG 61.808 66.667 13.04 3.82 0.00 4.24
1450 4461 4.334118 AGCACGACCATGGCAGCA 62.334 61.111 13.04 0.00 0.00 4.41
1451 4462 3.807538 CAGCACGACCATGGCAGC 61.808 66.667 13.04 10.90 0.00 5.25
1452 4463 2.359107 ACAGCACGACCATGGCAG 60.359 61.111 13.04 8.72 0.00 4.85
1453 4464 2.669229 CACAGCACGACCATGGCA 60.669 61.111 13.04 0.00 0.00 4.92
1454 4465 4.107051 GCACAGCACGACCATGGC 62.107 66.667 13.04 3.65 0.00 4.40
1456 4467 3.792047 CGGCACAGCACGACCATG 61.792 66.667 0.00 0.00 0.00 3.66
1463 4474 4.374702 CAACGAGCGGCACAGCAC 62.375 66.667 1.45 0.00 40.15 4.40
1466 4477 1.577328 AATTCCAACGAGCGGCACAG 61.577 55.000 1.45 0.00 0.00 3.66
1467 4478 1.599518 AATTCCAACGAGCGGCACA 60.600 52.632 1.45 0.00 0.00 4.57
1468 4479 1.154225 CAATTCCAACGAGCGGCAC 60.154 57.895 1.45 0.00 0.00 5.01
1469 4480 2.331893 CCAATTCCAACGAGCGGCA 61.332 57.895 1.45 0.00 0.00 5.69
1470 4481 1.376609 ATCCAATTCCAACGAGCGGC 61.377 55.000 0.00 0.00 0.00 6.53
1471 4482 1.094785 AATCCAATTCCAACGAGCGG 58.905 50.000 0.00 0.00 0.00 5.52
1472 4483 3.126171 TGTTAATCCAATTCCAACGAGCG 59.874 43.478 0.00 0.00 0.00 5.03
1473 4484 4.695217 TGTTAATCCAATTCCAACGAGC 57.305 40.909 0.00 0.00 0.00 5.03
1474 4485 6.677913 ACTTTGTTAATCCAATTCCAACGAG 58.322 36.000 0.00 0.00 0.00 4.18
1475 4486 6.488683 AGACTTTGTTAATCCAATTCCAACGA 59.511 34.615 0.00 0.00 0.00 3.85
1476 4487 6.677913 AGACTTTGTTAATCCAATTCCAACG 58.322 36.000 0.00 0.00 0.00 4.10
1477 4488 7.657336 TGAGACTTTGTTAATCCAATTCCAAC 58.343 34.615 0.00 0.00 0.00 3.77
1478 4489 7.831691 TGAGACTTTGTTAATCCAATTCCAA 57.168 32.000 0.00 0.00 0.00 3.53
1479 4490 7.451255 ACATGAGACTTTGTTAATCCAATTCCA 59.549 33.333 0.00 0.00 0.00 3.53
1480 4491 7.830739 ACATGAGACTTTGTTAATCCAATTCC 58.169 34.615 0.00 0.00 0.00 3.01
1481 4492 8.514594 TGACATGAGACTTTGTTAATCCAATTC 58.485 33.333 0.00 0.00 0.00 2.17
1482 4493 8.408043 TGACATGAGACTTTGTTAATCCAATT 57.592 30.769 0.00 0.00 0.00 2.32
1483 4494 7.667219 ACTGACATGAGACTTTGTTAATCCAAT 59.333 33.333 0.00 0.00 0.00 3.16
1484 4495 6.998074 ACTGACATGAGACTTTGTTAATCCAA 59.002 34.615 0.00 0.00 0.00 3.53
1485 4496 6.533730 ACTGACATGAGACTTTGTTAATCCA 58.466 36.000 0.00 0.00 0.00 3.41
1486 4497 7.389053 AGAACTGACATGAGACTTTGTTAATCC 59.611 37.037 0.00 0.00 0.00 3.01
1487 4498 8.226448 CAGAACTGACATGAGACTTTGTTAATC 58.774 37.037 0.00 0.00 0.00 1.75
1488 4499 7.308229 GCAGAACTGACATGAGACTTTGTTAAT 60.308 37.037 0.00 0.00 0.00 1.40
1489 4500 6.017934 GCAGAACTGACATGAGACTTTGTTAA 60.018 38.462 0.00 0.00 0.00 2.01
1490 4501 5.466728 GCAGAACTGACATGAGACTTTGTTA 59.533 40.000 0.00 0.00 0.00 2.41
1491 4502 4.274459 GCAGAACTGACATGAGACTTTGTT 59.726 41.667 0.00 0.00 0.00 2.83
1492 4503 3.812053 GCAGAACTGACATGAGACTTTGT 59.188 43.478 0.00 0.00 0.00 2.83
1493 4504 3.811497 TGCAGAACTGACATGAGACTTTG 59.189 43.478 0.00 0.00 0.00 2.77
1494 4505 3.812053 GTGCAGAACTGACATGAGACTTT 59.188 43.478 0.00 0.00 0.00 2.66
1495 4506 3.397482 GTGCAGAACTGACATGAGACTT 58.603 45.455 0.00 0.00 0.00 3.01
1496 4507 2.289320 GGTGCAGAACTGACATGAGACT 60.289 50.000 0.00 0.00 0.00 3.24
1497 4508 2.072298 GGTGCAGAACTGACATGAGAC 58.928 52.381 0.00 0.00 0.00 3.36
1498 4509 1.337167 CGGTGCAGAACTGACATGAGA 60.337 52.381 0.00 0.00 37.33 3.27
1499 4510 1.073964 CGGTGCAGAACTGACATGAG 58.926 55.000 0.00 0.00 37.33 2.90
1500 4511 0.392706 ACGGTGCAGAACTGACATGA 59.607 50.000 0.00 0.00 38.65 3.07
1501 4512 0.514255 CACGGTGCAGAACTGACATG 59.486 55.000 5.97 0.00 38.65 3.21
1502 4513 1.230635 GCACGGTGCAGAACTGACAT 61.231 55.000 27.10 0.00 44.26 3.06
1503 4514 1.887242 GCACGGTGCAGAACTGACA 60.887 57.895 27.10 1.03 44.26 3.58
1504 4515 2.939022 GCACGGTGCAGAACTGAC 59.061 61.111 27.10 0.00 44.26 3.51
1515 4526 3.938963 CTCACCATGTAATTAAGCACGGT 59.061 43.478 0.00 0.00 30.69 4.83
1516 4527 3.312421 CCTCACCATGTAATTAAGCACGG 59.688 47.826 0.00 0.00 0.00 4.94
1530 4541 5.801380 ACTACGTTCATTTTACCTCACCAT 58.199 37.500 0.00 0.00 0.00 3.55
1532 4543 6.646240 TGTTACTACGTTCATTTTACCTCACC 59.354 38.462 0.00 0.00 0.00 4.02
1533 4544 7.642071 TGTTACTACGTTCATTTTACCTCAC 57.358 36.000 0.00 0.00 0.00 3.51
1542 4553 9.257651 GGCTTCTTATATGTTACTACGTTCATT 57.742 33.333 0.00 0.00 0.00 2.57
1543 4554 7.594015 CGGCTTCTTATATGTTACTACGTTCAT 59.406 37.037 0.00 0.00 0.00 2.57
1544 4555 6.914215 CGGCTTCTTATATGTTACTACGTTCA 59.086 38.462 0.00 0.00 0.00 3.18
1545 4556 7.134815 TCGGCTTCTTATATGTTACTACGTTC 58.865 38.462 0.00 0.00 0.00 3.95
1548 4559 7.919313 TTTCGGCTTCTTATATGTTACTACG 57.081 36.000 0.00 0.00 0.00 3.51
1549 4560 8.221766 GCATTTCGGCTTCTTATATGTTACTAC 58.778 37.037 0.00 0.00 0.00 2.73
1550 4561 7.386848 GGCATTTCGGCTTCTTATATGTTACTA 59.613 37.037 0.00 0.00 37.17 1.82
1556 4569 3.745975 TCGGCATTTCGGCTTCTTATATG 59.254 43.478 0.00 0.00 38.27 1.78
1560 4573 1.939934 CATCGGCATTTCGGCTTCTTA 59.060 47.619 0.00 0.00 38.27 2.10
1561 4574 0.734889 CATCGGCATTTCGGCTTCTT 59.265 50.000 0.00 0.00 38.27 2.52
1563 4576 0.305922 CTCATCGGCATTTCGGCTTC 59.694 55.000 0.00 0.00 38.27 3.86
1564 4577 0.107703 TCTCATCGGCATTTCGGCTT 60.108 50.000 0.00 0.00 38.27 4.35
1566 4579 1.461127 GTATCTCATCGGCATTTCGGC 59.539 52.381 0.00 0.00 0.00 5.54
1567 4580 1.721389 CGTATCTCATCGGCATTTCGG 59.279 52.381 0.00 0.00 0.00 4.30
1568 4581 2.394708 ACGTATCTCATCGGCATTTCG 58.605 47.619 0.00 0.00 0.00 3.46
1569 4582 5.462398 ACTTAACGTATCTCATCGGCATTTC 59.538 40.000 0.00 0.00 0.00 2.17
1571 4584 4.945246 ACTTAACGTATCTCATCGGCATT 58.055 39.130 0.00 0.00 0.00 3.56
1587 4600 0.322648 ACCAGGGCCACGTACTTAAC 59.677 55.000 6.18 0.00 0.00 2.01
1588 4601 1.058284 AACCAGGGCCACGTACTTAA 58.942 50.000 6.18 0.00 0.00 1.85
1589 4602 1.002315 GAAACCAGGGCCACGTACTTA 59.998 52.381 6.18 0.00 0.00 2.24
1590 4603 0.250597 GAAACCAGGGCCACGTACTT 60.251 55.000 6.18 0.00 0.00 2.24
1591 4604 1.125711 AGAAACCAGGGCCACGTACT 61.126 55.000 6.18 1.81 0.00 2.73
1592 4605 0.953960 CAGAAACCAGGGCCACGTAC 60.954 60.000 6.18 0.00 0.00 3.67
1593 4606 1.122632 TCAGAAACCAGGGCCACGTA 61.123 55.000 6.18 0.00 0.00 3.57
1595 4608 1.966451 GTCAGAAACCAGGGCCACG 60.966 63.158 6.18 0.00 0.00 4.94
1597 4610 1.150536 GTGTCAGAAACCAGGGCCA 59.849 57.895 6.18 0.00 0.00 5.36
1598 4611 0.467290 TTGTGTCAGAAACCAGGGCC 60.467 55.000 0.00 0.00 0.00 5.80
1599 4612 0.668535 GTTGTGTCAGAAACCAGGGC 59.331 55.000 0.00 0.00 0.00 5.19
1600 4613 2.051334 TGTTGTGTCAGAAACCAGGG 57.949 50.000 0.00 0.00 0.00 4.45
1601 4614 4.082245 ACTTTTGTTGTGTCAGAAACCAGG 60.082 41.667 0.00 0.00 0.00 4.45
1602 4615 5.059404 ACTTTTGTTGTGTCAGAAACCAG 57.941 39.130 0.00 0.00 0.00 4.00
1603 4616 4.764823 AGACTTTTGTTGTGTCAGAAACCA 59.235 37.500 0.00 0.00 33.56 3.67
1604 4617 5.123979 AGAGACTTTTGTTGTGTCAGAAACC 59.876 40.000 0.00 0.00 33.56 3.27
1605 4618 6.024049 CAGAGACTTTTGTTGTGTCAGAAAC 58.976 40.000 0.00 0.00 33.56 2.78
1606 4619 5.705441 ACAGAGACTTTTGTTGTGTCAGAAA 59.295 36.000 0.00 0.00 33.56 2.52
1607 4620 5.245531 ACAGAGACTTTTGTTGTGTCAGAA 58.754 37.500 0.00 0.00 33.56 3.02
1608 4621 4.832248 ACAGAGACTTTTGTTGTGTCAGA 58.168 39.130 0.00 0.00 33.56 3.27
1609 4622 5.551760 AACAGAGACTTTTGTTGTGTCAG 57.448 39.130 5.73 0.00 36.26 3.51
1610 4623 5.957842 AAACAGAGACTTTTGTTGTGTCA 57.042 34.783 6.96 0.00 37.57 3.58
1648 4665 5.508825 CCGTACGAGTAGAGTAGTCCATAGT 60.509 48.000 18.76 0.00 0.00 2.12
1656 4673 6.036517 ACATTTACACCGTACGAGTAGAGTAG 59.963 42.308 18.76 10.46 0.00 2.57
1657 4674 5.874810 ACATTTACACCGTACGAGTAGAGTA 59.125 40.000 18.76 6.16 0.00 2.59
1658 4675 4.697352 ACATTTACACCGTACGAGTAGAGT 59.303 41.667 18.76 14.02 0.00 3.24
1659 4676 5.227238 ACATTTACACCGTACGAGTAGAG 57.773 43.478 18.76 13.48 0.00 2.43
1660 4677 6.735678 TTACATTTACACCGTACGAGTAGA 57.264 37.500 18.76 14.12 0.00 2.59
1661 4678 6.415867 CCATTACATTTACACCGTACGAGTAG 59.584 42.308 18.76 9.78 0.00 2.57
1669 4686 2.750712 GGCACCATTACATTTACACCGT 59.249 45.455 0.00 0.00 0.00 4.83
1676 4693 1.543802 CCACGTGGCACCATTACATTT 59.456 47.619 24.02 0.00 0.00 2.32
1702 4719 1.444553 GCTCGAGTTCGTCACCAGG 60.445 63.158 15.13 0.00 40.80 4.45
1704 4721 1.285950 CTGCTCGAGTTCGTCACCA 59.714 57.895 15.13 0.00 40.80 4.17
2067 5084 2.979197 CTCGACGTCCAGGAAGCGT 61.979 63.158 10.58 4.81 41.81 5.07
2187 5204 1.157870 CGTTGGACAGGTGCGAGTTT 61.158 55.000 0.00 0.00 0.00 2.66
2523 5540 1.885871 GCTGGTGCCATGGAAGAAC 59.114 57.895 18.40 7.34 0.00 3.01
2547 5564 4.845580 CGCGGGCAGAGGAAGCAT 62.846 66.667 0.00 0.00 0.00 3.79
2757 5782 6.203647 TGATGATGATGATTCAAAATGCGTC 58.796 36.000 0.00 0.00 34.96 5.19
3267 6292 3.372954 GTTCTCGATGTAGATGAACCGG 58.627 50.000 0.00 0.00 33.16 5.28
3329 6354 4.704103 TCAGGCAGCCGGAGTCCT 62.704 66.667 10.69 3.95 0.00 3.85
3410 6435 2.616330 GGGGTCACGACGTACACGA 61.616 63.158 9.04 0.00 43.02 4.35
3734 6762 2.669569 ACATGGCGCGACAAGCTT 60.670 55.556 23.46 0.00 45.59 3.74
3736 6764 4.505217 CGACATGGCGCGACAAGC 62.505 66.667 23.46 10.76 43.95 4.01
3762 6814 3.138798 GTGGGACGCCGAGAGCTA 61.139 66.667 0.00 0.00 40.39 3.32
3787 6839 2.327940 GCACAACAGGTCACGCAC 59.672 61.111 0.00 0.00 0.00 5.34
4277 7335 4.604082 CGTATTTACGTAATCCTCACGC 57.396 45.455 9.18 0.00 44.13 5.34
4295 7353 9.154847 CAGCCAATCATATGAATAAGATTCGTA 57.845 33.333 9.99 4.12 30.77 3.43
4301 7359 5.708697 CAGCCAGCCAATCATATGAATAAGA 59.291 40.000 9.99 0.00 0.00 2.10
4334 7392 1.535462 GTGGCGTGCTACTTTCAATGT 59.465 47.619 0.67 0.00 0.00 2.71
4337 7395 1.669604 TTGTGGCGTGCTACTTTCAA 58.330 45.000 9.76 0.00 0.00 2.69
4339 7397 2.289547 TCTTTTGTGGCGTGCTACTTTC 59.710 45.455 9.76 0.00 0.00 2.62
4340 7398 2.290641 CTCTTTTGTGGCGTGCTACTTT 59.709 45.455 9.76 0.00 0.00 2.66
4349 7460 2.143122 TGCTTACTCTCTTTTGTGGCG 58.857 47.619 0.00 0.00 0.00 5.69
4443 7554 2.108970 GTATTTCCGGACAGAGGGAGT 58.891 52.381 1.83 0.00 33.01 3.85
4444 7555 2.389715 AGTATTTCCGGACAGAGGGAG 58.610 52.381 1.83 0.00 33.01 4.30
4445 7556 2.500098 CAAGTATTTCCGGACAGAGGGA 59.500 50.000 1.83 0.00 0.00 4.20
4446 7557 2.236395 ACAAGTATTTCCGGACAGAGGG 59.764 50.000 1.83 0.00 0.00 4.30
4447 7558 3.611766 ACAAGTATTTCCGGACAGAGG 57.388 47.619 1.83 0.00 0.00 3.69
4448 7559 3.684788 CCAACAAGTATTTCCGGACAGAG 59.315 47.826 1.83 0.00 0.00 3.35
4449 7560 3.325425 TCCAACAAGTATTTCCGGACAGA 59.675 43.478 1.83 0.00 0.00 3.41
4450 7561 3.670625 TCCAACAAGTATTTCCGGACAG 58.329 45.455 1.83 0.00 0.00 3.51
4451 7562 3.325425 TCTCCAACAAGTATTTCCGGACA 59.675 43.478 1.83 0.00 0.00 4.02
4452 7563 3.934068 TCTCCAACAAGTATTTCCGGAC 58.066 45.455 1.83 0.00 0.00 4.79
4453 7564 4.627284 TTCTCCAACAAGTATTTCCGGA 57.373 40.909 0.00 0.00 0.00 5.14
4454 7565 5.897377 ATTTCTCCAACAAGTATTTCCGG 57.103 39.130 0.00 0.00 0.00 5.14
4455 7566 7.372451 TGTATTTCTCCAACAAGTATTTCCG 57.628 36.000 0.00 0.00 0.00 4.30
4505 7616 8.986991 GGAGGATTGGATGTATCTAGATGTATT 58.013 37.037 15.79 0.00 0.00 1.89
4506 7617 7.286546 CGGAGGATTGGATGTATCTAGATGTAT 59.713 40.741 15.79 9.11 0.00 2.29
4507 7618 6.603599 CGGAGGATTGGATGTATCTAGATGTA 59.396 42.308 15.79 4.44 0.00 2.29
4508 7619 5.420421 CGGAGGATTGGATGTATCTAGATGT 59.580 44.000 15.79 1.25 0.00 3.06
4509 7620 5.654209 TCGGAGGATTGGATGTATCTAGATG 59.346 44.000 15.79 0.00 0.00 2.90
4510 7621 5.654650 GTCGGAGGATTGGATGTATCTAGAT 59.345 44.000 10.73 10.73 0.00 1.98
4511 7622 5.010933 GTCGGAGGATTGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
4512 7623 4.142578 CGTCGGAGGATTGGATGTATCTAG 60.143 50.000 0.00 0.00 0.00 2.43
4513 7624 3.756963 CGTCGGAGGATTGGATGTATCTA 59.243 47.826 0.00 0.00 0.00 1.98
4514 7625 2.558795 CGTCGGAGGATTGGATGTATCT 59.441 50.000 0.00 0.00 0.00 1.98
4515 7626 2.557056 TCGTCGGAGGATTGGATGTATC 59.443 50.000 0.00 0.00 0.00 2.24
4516 7627 2.558795 CTCGTCGGAGGATTGGATGTAT 59.441 50.000 0.27 0.00 36.61 2.29
4517 7628 1.954382 CTCGTCGGAGGATTGGATGTA 59.046 52.381 0.27 0.00 36.61 2.29
4518 7629 0.747255 CTCGTCGGAGGATTGGATGT 59.253 55.000 0.27 0.00 36.61 3.06
4519 7630 0.747255 ACTCGTCGGAGGATTGGATG 59.253 55.000 0.27 0.00 44.93 3.51
4520 7631 2.359981 TACTCGTCGGAGGATTGGAT 57.640 50.000 0.27 0.00 44.93 3.41
4521 7632 2.359981 ATACTCGTCGGAGGATTGGA 57.640 50.000 0.27 0.00 41.24 3.53
4525 7636 1.607628 CGGAAATACTCGTCGGAGGAT 59.392 52.381 0.27 0.00 46.19 3.24
4526 7637 1.019673 CGGAAATACTCGTCGGAGGA 58.980 55.000 0.00 0.00 44.93 3.71
4527 7638 0.030369 CCGGAAATACTCGTCGGAGG 59.970 60.000 0.00 0.00 44.93 4.30
4528 7639 1.019673 TCCGGAAATACTCGTCGGAG 58.980 55.000 0.00 0.00 43.84 4.63
4529 7640 0.734889 GTCCGGAAATACTCGTCGGA 59.265 55.000 5.23 0.00 46.06 4.55
4530 7641 0.590732 CGTCCGGAAATACTCGTCGG 60.591 60.000 5.23 0.00 41.80 4.79
4531 7642 0.590732 CCGTCCGGAAATACTCGTCG 60.591 60.000 5.23 1.25 37.50 5.12
4532 7643 0.734889 TCCGTCCGGAAATACTCGTC 59.265 55.000 5.23 0.00 42.05 4.20
4533 7644 0.737219 CTCCGTCCGGAAATACTCGT 59.263 55.000 5.23 0.00 44.66 4.18
4534 7645 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.90 44.66 4.18
4535 7646 0.388294 CCCTCCGTCCGGAAATACTC 59.612 60.000 5.23 0.00 44.66 2.59
4536 7647 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4537 7648 0.826062 TTCCCTCCGTCCGGAAATAC 59.174 55.000 5.23 0.00 44.66 1.89
4538 7649 1.797320 ATTCCCTCCGTCCGGAAATA 58.203 50.000 5.23 0.00 44.66 1.40
4539 7650 1.797320 TATTCCCTCCGTCCGGAAAT 58.203 50.000 5.23 9.21 44.66 2.17
4540 7651 1.690352 GATATTCCCTCCGTCCGGAAA 59.310 52.381 5.23 1.92 44.66 3.13
4541 7652 1.335145 GATATTCCCTCCGTCCGGAA 58.665 55.000 5.23 0.00 44.66 4.30
4542 7653 0.186630 TGATATTCCCTCCGTCCGGA 59.813 55.000 0.00 0.00 42.90 5.14
4543 7654 0.317479 GTGATATTCCCTCCGTCCGG 59.683 60.000 0.00 0.00 0.00 5.14
4544 7655 0.317479 GGTGATATTCCCTCCGTCCG 59.683 60.000 0.00 0.00 0.00 4.79
4545 7656 0.317479 CGGTGATATTCCCTCCGTCC 59.683 60.000 0.00 0.00 36.99 4.79
4546 7657 1.269998 CTCGGTGATATTCCCTCCGTC 59.730 57.143 0.00 0.00 41.58 4.79
4547 7658 1.329256 CTCGGTGATATTCCCTCCGT 58.671 55.000 0.00 0.00 41.58 4.69
4548 7659 1.329256 ACTCGGTGATATTCCCTCCG 58.671 55.000 0.00 0.00 42.12 4.63
4549 7660 3.764218 TCTACTCGGTGATATTCCCTCC 58.236 50.000 0.00 0.00 0.00 4.30
4550 7661 4.381079 GCATCTACTCGGTGATATTCCCTC 60.381 50.000 0.00 0.00 0.00 4.30
4551 7662 3.511934 GCATCTACTCGGTGATATTCCCT 59.488 47.826 0.00 0.00 0.00 4.20
4552 7663 3.673594 CGCATCTACTCGGTGATATTCCC 60.674 52.174 0.00 0.00 0.00 3.97
4553 7664 3.190744 TCGCATCTACTCGGTGATATTCC 59.809 47.826 0.00 0.00 0.00 3.01
4554 7665 4.083217 ACTCGCATCTACTCGGTGATATTC 60.083 45.833 0.00 0.00 0.00 1.75
4555 7666 3.821600 ACTCGCATCTACTCGGTGATATT 59.178 43.478 0.00 0.00 0.00 1.28
4556 7667 3.189495 CACTCGCATCTACTCGGTGATAT 59.811 47.826 0.00 0.00 32.58 1.63
4557 7668 2.548480 CACTCGCATCTACTCGGTGATA 59.452 50.000 0.00 0.00 32.58 2.15
4558 7669 1.335182 CACTCGCATCTACTCGGTGAT 59.665 52.381 0.00 0.00 32.58 3.06
4559 7670 0.733150 CACTCGCATCTACTCGGTGA 59.267 55.000 0.00 0.00 32.58 4.02
4560 7671 0.248661 CCACTCGCATCTACTCGGTG 60.249 60.000 0.00 0.00 0.00 4.94
4561 7672 0.680280 ACCACTCGCATCTACTCGGT 60.680 55.000 0.00 0.00 0.00 4.69
4562 7673 0.456221 AACCACTCGCATCTACTCGG 59.544 55.000 0.00 0.00 0.00 4.63
4563 7674 1.550065 CAACCACTCGCATCTACTCG 58.450 55.000 0.00 0.00 0.00 4.18
4564 7675 1.927895 CCAACCACTCGCATCTACTC 58.072 55.000 0.00 0.00 0.00 2.59
4565 7676 0.108138 GCCAACCACTCGCATCTACT 60.108 55.000 0.00 0.00 0.00 2.57
4566 7677 0.108138 AGCCAACCACTCGCATCTAC 60.108 55.000 0.00 0.00 0.00 2.59
4567 7678 1.480789 TAGCCAACCACTCGCATCTA 58.519 50.000 0.00 0.00 0.00 1.98
4568 7679 0.613260 TTAGCCAACCACTCGCATCT 59.387 50.000 0.00 0.00 0.00 2.90
4569 7680 1.448985 TTTAGCCAACCACTCGCATC 58.551 50.000 0.00 0.00 0.00 3.91
4570 7681 2.128771 ATTTAGCCAACCACTCGCAT 57.871 45.000 0.00 0.00 0.00 4.73
4571 7682 1.904287 AATTTAGCCAACCACTCGCA 58.096 45.000 0.00 0.00 0.00 5.10
4572 7683 4.142469 ACAATAATTTAGCCAACCACTCGC 60.142 41.667 0.00 0.00 0.00 5.03
4573 7684 5.560966 ACAATAATTTAGCCAACCACTCG 57.439 39.130 0.00 0.00 0.00 4.18
4574 7685 7.625828 AGTACAATAATTTAGCCAACCACTC 57.374 36.000 0.00 0.00 0.00 3.51
4575 7686 9.338622 GATAGTACAATAATTTAGCCAACCACT 57.661 33.333 0.00 0.00 0.00 4.00
4576 7687 9.116067 TGATAGTACAATAATTTAGCCAACCAC 57.884 33.333 0.00 0.00 0.00 4.16
4577 7688 9.688091 TTGATAGTACAATAATTTAGCCAACCA 57.312 29.630 0.00 0.00 0.00 3.67
4589 7700 9.784680 GACGACTCTTCTTTGATAGTACAATAA 57.215 33.333 0.00 0.00 0.00 1.40
4590 7701 9.175312 AGACGACTCTTCTTTGATAGTACAATA 57.825 33.333 0.00 0.00 0.00 1.90
4591 7702 8.057536 AGACGACTCTTCTTTGATAGTACAAT 57.942 34.615 0.00 0.00 0.00 2.71
4592 7703 7.174426 TGAGACGACTCTTCTTTGATAGTACAA 59.826 37.037 15.65 0.00 42.99 2.41
4593 7704 6.653740 TGAGACGACTCTTCTTTGATAGTACA 59.346 38.462 15.65 0.00 42.99 2.90
4594 7705 7.074507 TGAGACGACTCTTCTTTGATAGTAC 57.925 40.000 15.65 0.00 42.99 2.73
4595 7706 7.553044 TCATGAGACGACTCTTCTTTGATAGTA 59.447 37.037 15.65 0.00 42.99 1.82
4596 7707 6.375736 TCATGAGACGACTCTTCTTTGATAGT 59.624 38.462 15.65 0.00 42.99 2.12
4597 7708 6.790282 TCATGAGACGACTCTTCTTTGATAG 58.210 40.000 15.65 0.00 42.99 2.08
4598 7709 6.599638 TCTCATGAGACGACTCTTCTTTGATA 59.400 38.462 21.67 0.00 42.99 2.15
4599 7710 5.417266 TCTCATGAGACGACTCTTCTTTGAT 59.583 40.000 21.67 0.00 42.99 2.57
4600 7711 4.762251 TCTCATGAGACGACTCTTCTTTGA 59.238 41.667 21.67 9.58 42.99 2.69
4601 7712 5.053140 TCTCATGAGACGACTCTTCTTTG 57.947 43.478 21.67 6.32 42.99 2.77
4602 7713 5.417266 TGATCTCATGAGACGACTCTTCTTT 59.583 40.000 27.37 7.16 42.99 2.52
4603 7714 4.946772 TGATCTCATGAGACGACTCTTCTT 59.053 41.667 27.37 7.70 42.99 2.52
4604 7715 4.522114 TGATCTCATGAGACGACTCTTCT 58.478 43.478 27.37 8.48 42.99 2.85
4605 7716 4.891627 TGATCTCATGAGACGACTCTTC 57.108 45.455 27.37 18.39 42.99 2.87
4606 7717 4.460731 TGTTGATCTCATGAGACGACTCTT 59.539 41.667 27.37 10.02 42.99 2.85
4607 7718 4.013050 TGTTGATCTCATGAGACGACTCT 58.987 43.478 27.37 10.80 42.99 3.24
4608 7719 4.350346 CTGTTGATCTCATGAGACGACTC 58.650 47.826 27.37 20.10 40.75 3.36
4609 7720 3.130164 CCTGTTGATCTCATGAGACGACT 59.870 47.826 27.37 11.98 40.75 4.18
4610 7721 3.443037 CCTGTTGATCTCATGAGACGAC 58.557 50.000 27.37 25.49 40.75 4.34
4611 7722 2.159184 GCCTGTTGATCTCATGAGACGA 60.159 50.000 27.37 17.05 40.75 4.20
4612 7723 2.200067 GCCTGTTGATCTCATGAGACG 58.800 52.381 27.37 11.24 40.75 4.18
4613 7724 2.200067 CGCCTGTTGATCTCATGAGAC 58.800 52.381 27.37 19.87 40.75 3.36
4614 7725 1.827344 ACGCCTGTTGATCTCATGAGA 59.173 47.619 27.03 27.03 42.37 3.27
4615 7726 1.931841 CACGCCTGTTGATCTCATGAG 59.068 52.381 17.07 17.07 0.00 2.90
4616 7727 1.405933 CCACGCCTGTTGATCTCATGA 60.406 52.381 0.00 0.00 0.00 3.07
4617 7728 1.012086 CCACGCCTGTTGATCTCATG 58.988 55.000 0.00 0.00 0.00 3.07
4618 7729 0.904649 TCCACGCCTGTTGATCTCAT 59.095 50.000 0.00 0.00 0.00 2.90
4619 7730 0.904649 ATCCACGCCTGTTGATCTCA 59.095 50.000 0.00 0.00 0.00 3.27
4620 7731 2.029838 AATCCACGCCTGTTGATCTC 57.970 50.000 0.00 0.00 29.72 2.75
4621 7732 2.496899 AAATCCACGCCTGTTGATCT 57.503 45.000 0.00 0.00 29.72 2.75
4622 7733 4.096382 ACAATAAATCCACGCCTGTTGATC 59.904 41.667 0.00 0.00 29.72 2.92
4623 7734 4.016444 ACAATAAATCCACGCCTGTTGAT 58.984 39.130 0.00 0.00 32.19 2.57
4624 7735 3.417101 ACAATAAATCCACGCCTGTTGA 58.583 40.909 0.00 0.00 0.00 3.18
4625 7736 3.848272 ACAATAAATCCACGCCTGTTG 57.152 42.857 0.00 0.00 0.00 3.33
4626 7737 4.328536 TGTACAATAAATCCACGCCTGTT 58.671 39.130 0.00 0.00 0.00 3.16
4627 7738 3.945346 TGTACAATAAATCCACGCCTGT 58.055 40.909 0.00 0.00 0.00 4.00
4628 7739 5.499139 AATGTACAATAAATCCACGCCTG 57.501 39.130 0.00 0.00 0.00 4.85
4629 7740 6.482308 GTCTAATGTACAATAAATCCACGCCT 59.518 38.462 0.00 0.00 0.00 5.52
4630 7741 6.563381 CGTCTAATGTACAATAAATCCACGCC 60.563 42.308 0.00 0.00 0.00 5.68
4631 7742 6.019318 ACGTCTAATGTACAATAAATCCACGC 60.019 38.462 0.00 0.00 0.00 5.34
4632 7743 7.459394 ACGTCTAATGTACAATAAATCCACG 57.541 36.000 0.00 3.59 0.00 4.94
4651 7762 9.715121 TGAACCTTATAAGAAATGTAAACGTCT 57.285 29.630 14.28 0.00 0.00 4.18
4659 7770 9.753674 TCTGGATTTGAACCTTATAAGAAATGT 57.246 29.630 14.28 0.26 0.00 2.71
4686 7797 2.482721 CGCCGAGTAGACCATTGTTTTT 59.517 45.455 0.00 0.00 0.00 1.94
4687 7798 2.073816 CGCCGAGTAGACCATTGTTTT 58.926 47.619 0.00 0.00 0.00 2.43
4688 7799 1.674817 CCGCCGAGTAGACCATTGTTT 60.675 52.381 0.00 0.00 0.00 2.83
4689 7800 0.108329 CCGCCGAGTAGACCATTGTT 60.108 55.000 0.00 0.00 0.00 2.83
4690 7801 1.515954 CCGCCGAGTAGACCATTGT 59.484 57.895 0.00 0.00 0.00 2.71
4691 7802 1.883084 GCCGCCGAGTAGACCATTG 60.883 63.158 0.00 0.00 0.00 2.82
4692 7803 1.686325 ATGCCGCCGAGTAGACCATT 61.686 55.000 0.00 0.00 0.00 3.16
4693 7804 2.088674 GATGCCGCCGAGTAGACCAT 62.089 60.000 0.00 0.00 0.00 3.55
4694 7805 2.758327 ATGCCGCCGAGTAGACCA 60.758 61.111 0.00 0.00 0.00 4.02
4695 7806 2.027751 GATGCCGCCGAGTAGACC 59.972 66.667 0.00 0.00 0.00 3.85
4696 7807 2.027751 GGATGCCGCCGAGTAGAC 59.972 66.667 0.00 0.00 0.00 2.59
4722 7833 4.038642 TCCTTCAAAGGTAAAAATTGCGCT 59.961 37.500 9.73 0.00 46.54 5.92
4736 7847 2.521547 ATCCTTGGGCTCCTTCAAAG 57.478 50.000 0.00 0.00 0.00 2.77
4737 7848 4.396357 TTTATCCTTGGGCTCCTTCAAA 57.604 40.909 0.00 0.00 0.00 2.69
4738 7849 4.396357 TTTTATCCTTGGGCTCCTTCAA 57.604 40.909 0.00 0.00 0.00 2.69
4741 7852 4.608170 TCATTTTATCCTTGGGCTCCTT 57.392 40.909 0.00 0.00 0.00 3.36
4742 7853 4.821532 ATCATTTTATCCTTGGGCTCCT 57.178 40.909 0.00 0.00 0.00 3.69
4743 7854 5.420104 CCATATCATTTTATCCTTGGGCTCC 59.580 44.000 0.00 0.00 0.00 4.70
4744 7855 6.248433 TCCATATCATTTTATCCTTGGGCTC 58.752 40.000 0.00 0.00 0.00 4.70
4745 7856 6.218195 TCCATATCATTTTATCCTTGGGCT 57.782 37.500 0.00 0.00 0.00 5.19
4746 7857 6.071165 CCTTCCATATCATTTTATCCTTGGGC 60.071 42.308 0.00 0.00 0.00 5.36
4751 7865 6.723052 CCAAGCCTTCCATATCATTTTATCCT 59.277 38.462 0.00 0.00 0.00 3.24
4811 7927 5.234543 GCGGTCCAAATTCTATCTTGTAGAC 59.765 44.000 0.00 0.00 0.00 2.59
4880 7996 4.908601 TCTTGCATTCTCTTACAGGGAA 57.091 40.909 0.00 0.00 0.00 3.97
4883 7999 5.645067 TCACATTCTTGCATTCTCTTACAGG 59.355 40.000 0.00 0.00 0.00 4.00
4894 8010 5.100344 AGATGAGACTCACATTCTTGCAT 57.900 39.130 7.47 0.00 0.00 3.96
4920 8036 0.109964 GCGTGTAGCGGCATTTGAAA 60.110 50.000 1.45 0.00 41.69 2.69
4938 8054 0.951558 TCAAAGACCAAAGCCTTCGC 59.048 50.000 0.00 0.00 0.00 4.70
4994 8110 2.203422 CAACCAAGGGCCAACCGA 60.203 61.111 6.18 0.00 46.96 4.69
5008 8124 1.876156 CCAAGCCTCAACTGAGTCAAC 59.124 52.381 6.01 0.00 40.48 3.18
5010 8126 1.131638 ACCAAGCCTCAACTGAGTCA 58.868 50.000 6.01 0.00 40.48 3.41
5032 8148 2.708861 TGTCATTGTCCCAGGTACTTGT 59.291 45.455 4.10 0.00 34.60 3.16
5043 8159 0.039527 GGTTTGGCGTGTCATTGTCC 60.040 55.000 0.00 0.00 0.00 4.02
5065 8181 1.472904 GGTTAGGGACGCCTTAGCTTC 60.473 57.143 0.00 0.00 36.56 3.86
5121 8237 1.597742 TGTGCTTGAAGACTCTTGCC 58.402 50.000 0.00 0.00 0.00 4.52
5149 8265 1.497991 GCAAGCAATATAGTCGGCGA 58.502 50.000 4.99 4.99 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.