Multiple sequence alignment - TraesCS5B01G221900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G221900 chr5B 100.000 2309 0 0 1 2309 396492431 396490123 0.000000e+00 4265
1 TraesCS5B01G221900 chr5B 96.881 481 14 1 1 480 87254230 87253750 0.000000e+00 804
2 TraesCS5B01G221900 chr5B 79.570 186 24 6 822 1003 255680808 255680633 1.120000e-23 121
3 TraesCS5B01G221900 chr3A 98.830 1111 11 2 509 1619 265258822 265257714 0.000000e+00 1978
4 TraesCS5B01G221900 chr3A 99.451 546 3 0 1764 2309 265257729 265257184 0.000000e+00 992
5 TraesCS5B01G221900 chr3A 96.753 154 2 3 1612 1764 522092645 522092796 1.060000e-63 254
6 TraesCS5B01G221900 chr3A 92.308 169 12 1 1595 1763 201093116 201093283 2.960000e-59 239
7 TraesCS5B01G221900 chr3A 97.674 43 1 0 476 518 265258987 265258945 8.850000e-10 75
8 TraesCS5B01G221900 chr4A 97.484 477 12 0 1 477 736332188 736331712 0.000000e+00 815
9 TraesCS5B01G221900 chr4A 91.257 183 12 4 1610 1791 162287381 162287202 1.770000e-61 246
10 TraesCS5B01G221900 chr3B 97.095 482 13 1 1 481 449727961 449728442 0.000000e+00 811
11 TraesCS5B01G221900 chr2B 97.077 479 13 1 3 480 581538694 581538216 0.000000e+00 806
12 TraesCS5B01G221900 chr2B 93.963 381 15 2 1929 2309 512176478 512176850 9.260000e-159 569
13 TraesCS5B01G221900 chr2B 94.218 294 14 2 1328 1619 512176171 512176463 1.630000e-121 446
14 TraesCS5B01G221900 chr2B 79.444 180 23 6 822 997 132281349 132281518 5.210000e-22 115
15 TraesCS5B01G221900 chr7B 96.881 481 14 1 1 480 119165513 119165993 0.000000e+00 804
16 TraesCS5B01G221900 chr7B 96.881 481 14 1 1 480 461320160 461319680 0.000000e+00 804
17 TraesCS5B01G221900 chr7B 96.881 481 13 2 1 480 736124888 736124409 0.000000e+00 804
18 TraesCS5B01G221900 chr7B 91.603 131 9 2 1469 1598 70427676 70427547 1.820000e-41 180
19 TraesCS5B01G221900 chr4B 96.881 481 14 1 1 480 389322486 389322006 0.000000e+00 804
20 TraesCS5B01G221900 chr1B 96.881 481 13 2 1 480 536996546 536996067 0.000000e+00 804
21 TraesCS5B01G221900 chrUn 91.218 501 37 4 1812 2309 89779018 89778522 0.000000e+00 675
22 TraesCS5B01G221900 chrUn 83.631 672 71 18 534 1176 89780475 89779814 1.530000e-166 595
23 TraesCS5B01G221900 chrUn 90.625 448 36 3 1176 1619 89779516 89779071 7.110000e-165 590
24 TraesCS5B01G221900 chrUn 95.588 68 3 0 1764 1831 89779086 89779019 2.430000e-20 110
25 TraesCS5B01G221900 chr6D 97.386 153 2 2 1612 1763 415016550 415016701 2.280000e-65 259
26 TraesCS5B01G221900 chr7D 97.351 151 2 2 1614 1764 377611843 377611695 2.940000e-64 255
27 TraesCS5B01G221900 chr7D 86.175 217 15 6 1176 1383 445904322 445904112 1.070000e-53 220
28 TraesCS5B01G221900 chr6B 96.154 156 2 4 1608 1763 62807493 62807342 3.810000e-63 252
29 TraesCS5B01G221900 chr2D 97.315 149 3 1 1617 1764 198137188 198137336 3.810000e-63 252
30 TraesCS5B01G221900 chr7A 89.055 201 21 1 922 1122 116031816 116031617 4.930000e-62 248
31 TraesCS5B01G221900 chr7A 81.437 167 19 7 837 1003 220546591 220546437 2.410000e-25 126
32 TraesCS5B01G221900 chr6A 93.452 168 6 5 1625 1790 105990923 105991087 6.370000e-61 244
33 TraesCS5B01G221900 chr1D 92.857 168 12 0 1618 1785 328831822 328831655 6.370000e-61 244
34 TraesCS5B01G221900 chr3D 79.444 180 23 6 822 997 141381288 141381457 5.210000e-22 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G221900 chr5B 396490123 396492431 2308 True 4265.0 4265 100.000000 1 2309 1 chr5B.!!$R3 2308
1 TraesCS5B01G221900 chr3A 265257184 265258987 1803 True 1015.0 1978 98.651667 476 2309 3 chr3A.!!$R1 1833
2 TraesCS5B01G221900 chr2B 512176171 512176850 679 False 507.5 569 94.090500 1328 2309 2 chr2B.!!$F2 981
3 TraesCS5B01G221900 chrUn 89778522 89780475 1953 True 492.5 675 90.265500 534 2309 4 chrUn.!!$R1 1775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
61 62 0.034896 ACCGTTGTCCAGTGATCCAC 59.965 55.0 0.0 0.0 34.1 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 2194 0.326238 TAGCCTAGTGGTGGGAAGGG 60.326 60.0 0.0 0.0 35.27 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.893020 ACATATCCTTAGTCCTTTTCAGGT 57.107 37.500 0.00 0.00 41.69 4.00
25 26 7.989947 ACATATCCTTAGTCCTTTTCAGGTA 57.010 36.000 0.00 0.00 41.69 3.08
26 27 8.568617 ACATATCCTTAGTCCTTTTCAGGTAT 57.431 34.615 0.00 0.00 41.69 2.73
27 28 9.004231 ACATATCCTTAGTCCTTTTCAGGTATT 57.996 33.333 0.00 0.00 41.69 1.89
28 29 9.853177 CATATCCTTAGTCCTTTTCAGGTATTT 57.147 33.333 0.00 0.00 41.69 1.40
30 31 7.324388 TCCTTAGTCCTTTTCAGGTATTTCA 57.676 36.000 0.00 0.00 41.69 2.69
31 32 7.394816 TCCTTAGTCCTTTTCAGGTATTTCAG 58.605 38.462 0.00 0.00 41.69 3.02
32 33 6.599638 CCTTAGTCCTTTTCAGGTATTTCAGG 59.400 42.308 0.00 0.00 41.69 3.86
33 34 5.843019 AGTCCTTTTCAGGTATTTCAGGA 57.157 39.130 0.00 0.00 41.69 3.86
34 35 6.394345 AGTCCTTTTCAGGTATTTCAGGAT 57.606 37.500 0.00 0.00 41.69 3.24
35 36 6.183347 AGTCCTTTTCAGGTATTTCAGGATG 58.817 40.000 0.00 0.00 41.69 3.51
36 37 5.946377 GTCCTTTTCAGGTATTTCAGGATGT 59.054 40.000 0.00 0.00 41.69 3.06
37 38 6.434340 GTCCTTTTCAGGTATTTCAGGATGTT 59.566 38.462 0.00 0.00 41.69 2.71
38 39 6.659242 TCCTTTTCAGGTATTTCAGGATGTTC 59.341 38.462 0.00 0.00 41.69 3.18
39 40 6.660949 CCTTTTCAGGTATTTCAGGATGTTCT 59.339 38.462 0.00 0.00 34.29 3.01
40 41 7.177392 CCTTTTCAGGTATTTCAGGATGTTCTT 59.823 37.037 0.00 0.00 34.29 2.52
41 42 7.452880 TTTCAGGTATTTCAGGATGTTCTTG 57.547 36.000 0.00 0.00 37.40 3.02
42 43 6.373005 TCAGGTATTTCAGGATGTTCTTGA 57.627 37.500 0.00 0.00 37.40 3.02
43 44 6.173339 TCAGGTATTTCAGGATGTTCTTGAC 58.827 40.000 0.00 0.00 31.94 3.18
44 45 5.355350 CAGGTATTTCAGGATGTTCTTGACC 59.645 44.000 0.00 0.00 31.94 4.02
45 46 4.332819 GGTATTTCAGGATGTTCTTGACCG 59.667 45.833 0.00 0.00 31.94 4.79
46 47 3.485463 TTTCAGGATGTTCTTGACCGT 57.515 42.857 0.00 0.00 31.94 4.83
47 48 3.485463 TTCAGGATGTTCTTGACCGTT 57.515 42.857 0.00 0.00 31.94 4.44
48 49 2.766313 TCAGGATGTTCTTGACCGTTG 58.234 47.619 0.00 0.00 37.40 4.10
49 50 2.104111 TCAGGATGTTCTTGACCGTTGT 59.896 45.455 0.00 0.00 37.40 3.32
50 51 2.480419 CAGGATGTTCTTGACCGTTGTC 59.520 50.000 0.00 0.00 42.12 3.18
51 52 1.804748 GGATGTTCTTGACCGTTGTCC 59.195 52.381 0.00 0.00 41.01 4.02
52 53 2.489971 GATGTTCTTGACCGTTGTCCA 58.510 47.619 0.00 0.00 41.01 4.02
53 54 1.948104 TGTTCTTGACCGTTGTCCAG 58.052 50.000 0.00 0.00 41.01 3.86
54 55 1.208535 TGTTCTTGACCGTTGTCCAGT 59.791 47.619 0.00 0.00 41.01 4.00
55 56 1.597663 GTTCTTGACCGTTGTCCAGTG 59.402 52.381 0.00 0.00 41.01 3.66
56 57 1.116308 TCTTGACCGTTGTCCAGTGA 58.884 50.000 0.00 0.00 41.01 3.41
57 58 1.691976 TCTTGACCGTTGTCCAGTGAT 59.308 47.619 0.00 0.00 41.01 3.06
58 59 2.069273 CTTGACCGTTGTCCAGTGATC 58.931 52.381 0.00 0.00 41.01 2.92
59 60 0.320374 TGACCGTTGTCCAGTGATCC 59.680 55.000 0.00 0.00 41.01 3.36
60 61 0.320374 GACCGTTGTCCAGTGATCCA 59.680 55.000 0.00 0.00 35.34 3.41
61 62 0.034896 ACCGTTGTCCAGTGATCCAC 59.965 55.000 0.00 0.00 34.10 4.02
62 63 0.321671 CCGTTGTCCAGTGATCCACT 59.678 55.000 0.00 0.00 46.51 4.00
63 64 1.673033 CCGTTGTCCAGTGATCCACTC 60.673 57.143 0.00 0.00 43.43 3.51
64 65 1.673033 CGTTGTCCAGTGATCCACTCC 60.673 57.143 0.00 0.00 43.43 3.85
65 66 1.625818 GTTGTCCAGTGATCCACTCCT 59.374 52.381 0.00 0.00 43.43 3.69
66 67 1.269958 TGTCCAGTGATCCACTCCTG 58.730 55.000 0.00 0.00 43.43 3.86
67 68 0.539051 GTCCAGTGATCCACTCCTGG 59.461 60.000 0.00 0.00 43.43 4.45
78 79 3.256704 TCCACTCCTGGATTACTTTGGT 58.743 45.455 0.00 0.00 42.15 3.67
79 80 4.431378 TCCACTCCTGGATTACTTTGGTA 58.569 43.478 0.00 0.00 42.15 3.25
80 81 4.224370 TCCACTCCTGGATTACTTTGGTAC 59.776 45.833 0.00 0.00 42.15 3.34
81 82 4.514401 CACTCCTGGATTACTTTGGTACC 58.486 47.826 4.43 4.43 0.00 3.34
82 83 4.225267 CACTCCTGGATTACTTTGGTACCT 59.775 45.833 14.36 0.00 0.00 3.08
83 84 4.470304 ACTCCTGGATTACTTTGGTACCTC 59.530 45.833 14.36 0.00 0.00 3.85
84 85 3.778629 TCCTGGATTACTTTGGTACCTCC 59.221 47.826 14.36 10.20 33.74 4.30
85 86 3.118000 CCTGGATTACTTTGGTACCTCCC 60.118 52.174 14.36 3.41 32.89 4.30
86 87 3.780850 CTGGATTACTTTGGTACCTCCCT 59.219 47.826 14.36 0.00 32.89 4.20
87 88 3.521937 TGGATTACTTTGGTACCTCCCTG 59.478 47.826 14.36 1.70 32.89 4.45
88 89 3.542648 GATTACTTTGGTACCTCCCTGC 58.457 50.000 14.36 0.00 34.77 4.85
89 90 2.337359 TACTTTGGTACCTCCCTGCT 57.663 50.000 14.36 0.00 34.77 4.24
90 91 2.337359 ACTTTGGTACCTCCCTGCTA 57.663 50.000 14.36 0.00 34.77 3.49
91 92 2.627933 ACTTTGGTACCTCCCTGCTAA 58.372 47.619 14.36 0.00 34.77 3.09
92 93 2.983898 ACTTTGGTACCTCCCTGCTAAA 59.016 45.455 14.36 1.57 34.77 1.85
93 94 3.244805 ACTTTGGTACCTCCCTGCTAAAC 60.245 47.826 14.36 0.00 34.77 2.01
94 95 2.337359 TGGTACCTCCCTGCTAAACT 57.663 50.000 14.36 0.00 34.77 2.66
95 96 3.478175 TGGTACCTCCCTGCTAAACTA 57.522 47.619 14.36 0.00 34.77 2.24
96 97 3.793712 TGGTACCTCCCTGCTAAACTAA 58.206 45.455 14.36 0.00 34.77 2.24
97 98 4.368067 TGGTACCTCCCTGCTAAACTAAT 58.632 43.478 14.36 0.00 34.77 1.73
98 99 5.531198 TGGTACCTCCCTGCTAAACTAATA 58.469 41.667 14.36 0.00 34.77 0.98
99 100 5.601313 TGGTACCTCCCTGCTAAACTAATAG 59.399 44.000 14.36 0.00 34.77 1.73
100 101 4.691326 ACCTCCCTGCTAAACTAATAGC 57.309 45.455 0.00 0.00 46.78 2.97
109 110 4.909894 GCTAAACTAATAGCAAGGCACAC 58.090 43.478 1.64 0.00 46.06 3.82
110 111 4.394920 GCTAAACTAATAGCAAGGCACACA 59.605 41.667 1.64 0.00 46.06 3.72
111 112 5.066505 GCTAAACTAATAGCAAGGCACACAT 59.933 40.000 1.64 0.00 46.06 3.21
112 113 5.567138 AAACTAATAGCAAGGCACACATC 57.433 39.130 0.00 0.00 0.00 3.06
113 114 4.220693 ACTAATAGCAAGGCACACATCA 57.779 40.909 0.00 0.00 0.00 3.07
114 115 4.588899 ACTAATAGCAAGGCACACATCAA 58.411 39.130 0.00 0.00 0.00 2.57
115 116 4.637534 ACTAATAGCAAGGCACACATCAAG 59.362 41.667 0.00 0.00 0.00 3.02
116 117 2.566833 TAGCAAGGCACACATCAAGT 57.433 45.000 0.00 0.00 0.00 3.16
117 118 1.242076 AGCAAGGCACACATCAAGTC 58.758 50.000 0.00 0.00 0.00 3.01
118 119 1.202855 AGCAAGGCACACATCAAGTCT 60.203 47.619 0.00 0.00 0.00 3.24
119 120 1.068748 GCAAGGCACACATCAAGTCTG 60.069 52.381 0.00 0.00 0.00 3.51
120 121 1.538512 CAAGGCACACATCAAGTCTGG 59.461 52.381 0.00 0.00 0.00 3.86
121 122 0.767375 AGGCACACATCAAGTCTGGT 59.233 50.000 0.00 0.00 0.00 4.00
122 123 1.977854 AGGCACACATCAAGTCTGGTA 59.022 47.619 0.00 0.00 0.00 3.25
123 124 2.076863 GGCACACATCAAGTCTGGTAC 58.923 52.381 0.00 0.00 0.00 3.34
124 125 2.549992 GGCACACATCAAGTCTGGTACA 60.550 50.000 0.00 0.00 0.00 2.90
125 126 2.480419 GCACACATCAAGTCTGGTACAC 59.520 50.000 0.00 0.00 0.00 2.90
126 127 3.727726 CACACATCAAGTCTGGTACACA 58.272 45.455 0.00 0.00 0.00 3.72
137 138 3.680642 CTGGTACACAGCATTGCATAC 57.319 47.619 11.91 7.48 40.97 2.39
138 139 3.009026 CTGGTACACAGCATTGCATACA 58.991 45.455 11.91 0.00 40.97 2.29
139 140 3.619419 TGGTACACAGCATTGCATACAT 58.381 40.909 11.91 0.00 0.00 2.29
140 141 3.377798 TGGTACACAGCATTGCATACATG 59.622 43.478 11.91 2.28 0.00 3.21
141 142 3.627123 GGTACACAGCATTGCATACATGA 59.373 43.478 11.91 0.00 0.00 3.07
142 143 4.276678 GGTACACAGCATTGCATACATGAT 59.723 41.667 11.91 0.00 0.00 2.45
143 144 5.469760 GGTACACAGCATTGCATACATGATA 59.530 40.000 11.91 0.00 0.00 2.15
144 145 5.684550 ACACAGCATTGCATACATGATAG 57.315 39.130 11.91 0.00 0.00 2.08
145 146 5.370679 ACACAGCATTGCATACATGATAGA 58.629 37.500 11.91 0.00 0.00 1.98
146 147 5.469084 ACACAGCATTGCATACATGATAGAG 59.531 40.000 11.91 0.00 0.00 2.43
147 148 4.454847 ACAGCATTGCATACATGATAGAGC 59.545 41.667 11.91 0.00 0.00 4.09
148 149 4.008330 AGCATTGCATACATGATAGAGCC 58.992 43.478 11.91 0.00 0.00 4.70
149 150 4.008330 GCATTGCATACATGATAGAGCCT 58.992 43.478 3.15 0.00 0.00 4.58
150 151 5.046087 AGCATTGCATACATGATAGAGCCTA 60.046 40.000 11.91 0.00 0.00 3.93
151 152 5.821470 GCATTGCATACATGATAGAGCCTAT 59.179 40.000 3.15 0.00 0.00 2.57
152 153 6.988580 GCATTGCATACATGATAGAGCCTATA 59.011 38.462 3.15 0.00 0.00 1.31
153 154 7.171167 GCATTGCATACATGATAGAGCCTATAG 59.829 40.741 3.15 0.00 0.00 1.31
154 155 6.154203 TGCATACATGATAGAGCCTATAGC 57.846 41.667 0.00 0.00 44.25 2.97
166 167 3.258971 GCCTATAGCTGAAGCATAGGG 57.741 52.381 25.55 15.70 43.93 3.53
167 168 2.834549 GCCTATAGCTGAAGCATAGGGA 59.165 50.000 25.55 2.89 43.93 4.20
168 169 3.261897 GCCTATAGCTGAAGCATAGGGAA 59.738 47.826 25.55 2.23 43.93 3.97
169 170 4.826556 CCTATAGCTGAAGCATAGGGAAC 58.173 47.826 21.23 0.00 42.25 3.62
170 171 4.530161 CCTATAGCTGAAGCATAGGGAACT 59.470 45.833 21.23 0.00 42.25 3.01
171 172 5.012561 CCTATAGCTGAAGCATAGGGAACTT 59.987 44.000 21.23 0.00 42.25 2.66
172 173 3.274095 AGCTGAAGCATAGGGAACTTC 57.726 47.619 4.90 0.00 45.16 3.01
173 174 2.843113 AGCTGAAGCATAGGGAACTTCT 59.157 45.455 4.90 0.00 45.16 2.85
174 175 3.265479 AGCTGAAGCATAGGGAACTTCTT 59.735 43.478 4.90 0.00 45.16 2.52
175 176 4.013050 GCTGAAGCATAGGGAACTTCTTT 58.987 43.478 0.00 0.00 40.36 2.52
176 177 4.095632 GCTGAAGCATAGGGAACTTCTTTC 59.904 45.833 0.00 0.00 40.36 2.62
177 178 5.241403 TGAAGCATAGGGAACTTCTTTCA 57.759 39.130 0.00 0.00 43.67 2.69
178 179 5.819991 TGAAGCATAGGGAACTTCTTTCAT 58.180 37.500 0.00 0.00 43.67 2.57
179 180 6.248433 TGAAGCATAGGGAACTTCTTTCATT 58.752 36.000 0.00 0.00 43.67 2.57
180 181 6.721208 TGAAGCATAGGGAACTTCTTTCATTT 59.279 34.615 0.00 0.00 43.67 2.32
181 182 7.233348 TGAAGCATAGGGAACTTCTTTCATTTT 59.767 33.333 0.00 0.00 43.67 1.82
182 183 7.163001 AGCATAGGGAACTTCTTTCATTTTC 57.837 36.000 0.00 0.00 43.67 2.29
183 184 6.950619 AGCATAGGGAACTTCTTTCATTTTCT 59.049 34.615 0.00 0.00 43.67 2.52
184 185 7.121907 AGCATAGGGAACTTCTTTCATTTTCTC 59.878 37.037 0.00 0.00 43.67 2.87
185 186 7.121907 GCATAGGGAACTTCTTTCATTTTCTCT 59.878 37.037 0.00 0.00 43.67 3.10
186 187 8.672815 CATAGGGAACTTCTTTCATTTTCTCTC 58.327 37.037 0.00 0.00 43.67 3.20
187 188 6.846988 AGGGAACTTCTTTCATTTTCTCTCT 58.153 36.000 0.00 0.00 37.44 3.10
188 189 7.978925 AGGGAACTTCTTTCATTTTCTCTCTA 58.021 34.615 0.00 0.00 37.44 2.43
189 190 8.610369 AGGGAACTTCTTTCATTTTCTCTCTAT 58.390 33.333 0.00 0.00 37.44 1.98
190 191 8.888716 GGGAACTTCTTTCATTTTCTCTCTATC 58.111 37.037 0.00 0.00 35.70 2.08
191 192 9.665719 GGAACTTCTTTCATTTTCTCTCTATCT 57.334 33.333 0.00 0.00 35.70 1.98
196 197 8.715191 TCTTTCATTTTCTCTCTATCTTCTGC 57.285 34.615 0.00 0.00 0.00 4.26
197 198 8.316946 TCTTTCATTTTCTCTCTATCTTCTGCA 58.683 33.333 0.00 0.00 0.00 4.41
198 199 8.489990 TTTCATTTTCTCTCTATCTTCTGCAG 57.510 34.615 7.63 7.63 0.00 4.41
199 200 7.180322 TCATTTTCTCTCTATCTTCTGCAGT 57.820 36.000 14.67 0.00 0.00 4.40
200 201 7.040494 TCATTTTCTCTCTATCTTCTGCAGTG 58.960 38.462 14.67 8.33 0.00 3.66
201 202 4.998671 TTCTCTCTATCTTCTGCAGTGG 57.001 45.455 14.67 7.93 0.00 4.00
202 203 3.974719 TCTCTCTATCTTCTGCAGTGGT 58.025 45.455 14.67 7.03 0.00 4.16
203 204 3.951037 TCTCTCTATCTTCTGCAGTGGTC 59.049 47.826 14.67 0.00 0.00 4.02
204 205 2.685388 TCTCTATCTTCTGCAGTGGTCG 59.315 50.000 14.67 1.02 0.00 4.79
205 206 1.751351 TCTATCTTCTGCAGTGGTCGG 59.249 52.381 14.67 2.11 0.00 4.79
206 207 1.751351 CTATCTTCTGCAGTGGTCGGA 59.249 52.381 14.67 4.77 0.00 4.55
207 208 0.247736 ATCTTCTGCAGTGGTCGGAC 59.752 55.000 14.67 0.00 0.00 4.79
208 209 1.112916 TCTTCTGCAGTGGTCGGACA 61.113 55.000 14.67 0.00 0.00 4.02
209 210 0.036952 CTTCTGCAGTGGTCGGACAT 60.037 55.000 14.67 0.00 0.00 3.06
210 211 0.396435 TTCTGCAGTGGTCGGACATT 59.604 50.000 14.67 0.00 0.00 2.71
211 212 0.320683 TCTGCAGTGGTCGGACATTG 60.321 55.000 14.67 6.00 0.00 2.82
212 213 0.320683 CTGCAGTGGTCGGACATTGA 60.321 55.000 10.76 0.00 30.51 2.57
213 214 0.320683 TGCAGTGGTCGGACATTGAG 60.321 55.000 10.76 0.00 30.51 3.02
214 215 0.320771 GCAGTGGTCGGACATTGAGT 60.321 55.000 10.76 0.00 30.51 3.41
215 216 1.714794 CAGTGGTCGGACATTGAGTC 58.285 55.000 10.76 0.00 46.83 3.36
216 217 1.273606 CAGTGGTCGGACATTGAGTCT 59.726 52.381 10.76 0.00 46.72 3.24
232 233 4.999751 GAGTCTGACTCAATTTCACACC 57.000 45.455 28.18 1.41 44.45 4.16
233 234 4.636249 GAGTCTGACTCAATTTCACACCT 58.364 43.478 28.18 0.00 44.45 4.00
234 235 5.041191 AGTCTGACTCAATTTCACACCTT 57.959 39.130 4.06 0.00 0.00 3.50
235 236 4.818546 AGTCTGACTCAATTTCACACCTTG 59.181 41.667 4.06 0.00 0.00 3.61
236 237 4.576463 GTCTGACTCAATTTCACACCTTGT 59.424 41.667 0.00 0.00 0.00 3.16
237 238 5.758296 GTCTGACTCAATTTCACACCTTGTA 59.242 40.000 0.00 0.00 0.00 2.41
238 239 6.428159 GTCTGACTCAATTTCACACCTTGTAT 59.572 38.462 0.00 0.00 0.00 2.29
239 240 6.998074 TCTGACTCAATTTCACACCTTGTATT 59.002 34.615 0.00 0.00 0.00 1.89
240 241 8.154203 TCTGACTCAATTTCACACCTTGTATTA 58.846 33.333 0.00 0.00 0.00 0.98
241 242 8.094798 TGACTCAATTTCACACCTTGTATTAC 57.905 34.615 0.00 0.00 0.00 1.89
242 243 7.717436 TGACTCAATTTCACACCTTGTATTACA 59.283 33.333 0.00 0.00 0.00 2.41
243 244 8.099364 ACTCAATTTCACACCTTGTATTACAG 57.901 34.615 0.00 0.00 0.00 2.74
244 245 7.174946 ACTCAATTTCACACCTTGTATTACAGG 59.825 37.037 9.45 9.45 0.00 4.00
245 246 5.897377 ATTTCACACCTTGTATTACAGGC 57.103 39.130 10.44 0.00 0.00 4.85
246 247 4.359434 TTCACACCTTGTATTACAGGCA 57.641 40.909 10.44 0.00 0.00 4.75
247 248 4.359434 TCACACCTTGTATTACAGGCAA 57.641 40.909 10.44 0.00 0.00 4.52
248 249 4.323417 TCACACCTTGTATTACAGGCAAG 58.677 43.478 10.44 0.00 39.26 4.01
249 250 4.041075 TCACACCTTGTATTACAGGCAAGA 59.959 41.667 5.24 5.38 41.31 3.02
250 251 4.759693 CACACCTTGTATTACAGGCAAGAA 59.240 41.667 5.24 0.00 41.31 2.52
251 252 4.760204 ACACCTTGTATTACAGGCAAGAAC 59.240 41.667 5.24 0.00 41.31 3.01
252 253 4.156008 CACCTTGTATTACAGGCAAGAACC 59.844 45.833 5.24 0.00 41.31 3.62
253 254 3.694566 CCTTGTATTACAGGCAAGAACCC 59.305 47.826 5.24 0.00 41.31 4.11
254 255 4.567747 CCTTGTATTACAGGCAAGAACCCT 60.568 45.833 5.24 0.00 41.31 4.34
255 256 4.650972 TGTATTACAGGCAAGAACCCTT 57.349 40.909 0.00 0.00 0.00 3.95
256 257 4.993028 TGTATTACAGGCAAGAACCCTTT 58.007 39.130 0.00 0.00 0.00 3.11
257 258 5.007682 TGTATTACAGGCAAGAACCCTTTC 58.992 41.667 0.00 0.00 0.00 2.62
258 259 3.876309 TTACAGGCAAGAACCCTTTCT 57.124 42.857 0.00 0.00 44.53 2.52
269 270 3.829026 AGAACCCTTTCTTTGCTTGATCC 59.171 43.478 0.00 0.00 39.17 3.36
270 271 3.243359 ACCCTTTCTTTGCTTGATCCA 57.757 42.857 0.00 0.00 0.00 3.41
271 272 3.782992 ACCCTTTCTTTGCTTGATCCAT 58.217 40.909 0.00 0.00 0.00 3.41
272 273 4.162651 ACCCTTTCTTTGCTTGATCCATT 58.837 39.130 0.00 0.00 0.00 3.16
273 274 4.594491 ACCCTTTCTTTGCTTGATCCATTT 59.406 37.500 0.00 0.00 0.00 2.32
274 275 5.072193 ACCCTTTCTTTGCTTGATCCATTTT 59.928 36.000 0.00 0.00 0.00 1.82
275 276 5.410439 CCCTTTCTTTGCTTGATCCATTTTG 59.590 40.000 0.00 0.00 0.00 2.44
276 277 6.225318 CCTTTCTTTGCTTGATCCATTTTGA 58.775 36.000 0.00 0.00 0.00 2.69
277 278 6.707161 CCTTTCTTTGCTTGATCCATTTTGAA 59.293 34.615 0.00 0.00 0.00 2.69
278 279 7.307573 CCTTTCTTTGCTTGATCCATTTTGAAC 60.308 37.037 0.00 0.00 0.00 3.18
279 280 6.409524 TCTTTGCTTGATCCATTTTGAACT 57.590 33.333 0.00 0.00 0.00 3.01
280 281 6.819284 TCTTTGCTTGATCCATTTTGAACTT 58.181 32.000 0.00 0.00 0.00 2.66
281 282 7.274447 TCTTTGCTTGATCCATTTTGAACTTT 58.726 30.769 0.00 0.00 0.00 2.66
282 283 7.769970 TCTTTGCTTGATCCATTTTGAACTTTT 59.230 29.630 0.00 0.00 0.00 2.27
283 284 7.862512 TTGCTTGATCCATTTTGAACTTTTT 57.137 28.000 0.00 0.00 0.00 1.94
284 285 7.481275 TGCTTGATCCATTTTGAACTTTTTC 57.519 32.000 0.00 0.00 0.00 2.29
285 286 7.046652 TGCTTGATCCATTTTGAACTTTTTCA 58.953 30.769 0.00 0.00 40.14 2.69
300 301 9.936759 TGAACTTTTTCAAAACTTTATCAAGGT 57.063 25.926 0.00 0.00 38.87 3.50
313 314 8.561738 ACTTTATCAAGGTATGTACTTTGTGG 57.438 34.615 12.76 5.21 42.02 4.17
314 315 8.380099 ACTTTATCAAGGTATGTACTTTGTGGA 58.620 33.333 12.76 0.00 42.02 4.02
315 316 9.226606 CTTTATCAAGGTATGTACTTTGTGGAA 57.773 33.333 12.76 5.47 42.02 3.53
316 317 8.786826 TTATCAAGGTATGTACTTTGTGGAAG 57.213 34.615 12.76 0.00 42.02 3.46
318 319 6.228258 TCAAGGTATGTACTTTGTGGAAGTC 58.772 40.000 12.76 0.00 45.40 3.01
319 320 5.161943 AGGTATGTACTTTGTGGAAGTCC 57.838 43.478 0.00 0.00 45.40 3.85
320 321 4.595781 AGGTATGTACTTTGTGGAAGTCCA 59.404 41.667 0.00 0.00 45.40 4.02
331 332 3.695830 TGGAAGTCCAATTAAGCGTCT 57.304 42.857 0.00 0.00 44.35 4.18
332 333 4.015872 TGGAAGTCCAATTAAGCGTCTT 57.984 40.909 0.00 0.00 44.35 3.01
333 334 3.751175 TGGAAGTCCAATTAAGCGTCTTG 59.249 43.478 0.00 0.00 44.35 3.02
334 335 4.000988 GGAAGTCCAATTAAGCGTCTTGA 58.999 43.478 2.86 0.00 35.64 3.02
335 336 4.636206 GGAAGTCCAATTAAGCGTCTTGAT 59.364 41.667 2.86 0.00 35.64 2.57
336 337 5.220681 GGAAGTCCAATTAAGCGTCTTGATC 60.221 44.000 2.86 0.00 35.64 2.92
337 338 5.091261 AGTCCAATTAAGCGTCTTGATCT 57.909 39.130 0.00 0.00 0.00 2.75
338 339 6.222038 AGTCCAATTAAGCGTCTTGATCTA 57.778 37.500 0.00 0.00 0.00 1.98
339 340 6.821388 AGTCCAATTAAGCGTCTTGATCTAT 58.179 36.000 0.00 0.00 0.00 1.98
340 341 6.926272 AGTCCAATTAAGCGTCTTGATCTATC 59.074 38.462 0.00 0.00 0.00 2.08
341 342 6.926272 GTCCAATTAAGCGTCTTGATCTATCT 59.074 38.462 0.00 0.00 0.00 1.98
342 343 7.115663 GTCCAATTAAGCGTCTTGATCTATCTC 59.884 40.741 0.00 0.00 0.00 2.75
343 344 7.014711 TCCAATTAAGCGTCTTGATCTATCTCT 59.985 37.037 0.00 0.00 0.00 3.10
344 345 8.300286 CCAATTAAGCGTCTTGATCTATCTCTA 58.700 37.037 0.00 0.00 0.00 2.43
345 346 9.853555 CAATTAAGCGTCTTGATCTATCTCTAT 57.146 33.333 0.00 0.00 0.00 1.98
348 349 9.945904 TTAAGCGTCTTGATCTATCTCTATAGA 57.054 33.333 1.69 1.69 46.31 1.98
360 361 7.646884 TCTATCTCTATAGATCTTGATGCCCA 58.353 38.462 0.00 0.00 41.71 5.36
361 362 8.118600 TCTATCTCTATAGATCTTGATGCCCAA 58.881 37.037 0.00 0.00 41.71 4.12
362 363 7.752518 ATCTCTATAGATCTTGATGCCCAAT 57.247 36.000 0.00 0.00 38.04 3.16
363 364 8.851106 ATCTCTATAGATCTTGATGCCCAATA 57.149 34.615 0.00 0.00 38.04 1.90
364 365 8.851106 TCTCTATAGATCTTGATGCCCAATAT 57.149 34.615 0.00 0.00 33.68 1.28
365 366 9.942526 TCTCTATAGATCTTGATGCCCAATATA 57.057 33.333 0.00 0.00 33.68 0.86
370 371 9.790344 ATAGATCTTGATGCCCAATATATAAGC 57.210 33.333 0.00 0.00 33.68 3.09
371 372 7.636579 AGATCTTGATGCCCAATATATAAGCA 58.363 34.615 6.68 6.68 37.94 3.91
372 373 7.774157 AGATCTTGATGCCCAATATATAAGCAG 59.226 37.037 9.33 0.00 36.80 4.24
373 374 5.649395 TCTTGATGCCCAATATATAAGCAGC 59.351 40.000 11.00 11.00 40.14 5.25
374 375 5.183530 TGATGCCCAATATATAAGCAGCT 57.816 39.130 16.14 0.00 40.36 4.24
375 376 5.573219 TGATGCCCAATATATAAGCAGCTT 58.427 37.500 13.46 13.46 40.36 3.74
376 377 5.649395 TGATGCCCAATATATAAGCAGCTTC 59.351 40.000 12.07 9.81 40.36 3.86
377 378 4.984295 TGCCCAATATATAAGCAGCTTCA 58.016 39.130 12.07 0.82 0.00 3.02
378 379 4.761739 TGCCCAATATATAAGCAGCTTCAC 59.238 41.667 12.07 0.00 0.00 3.18
379 380 5.006386 GCCCAATATATAAGCAGCTTCACT 58.994 41.667 12.07 0.27 0.00 3.41
392 393 4.363991 AGCTTCACTGAGGTCTTTCATT 57.636 40.909 0.00 0.00 0.00 2.57
393 394 4.070716 AGCTTCACTGAGGTCTTTCATTG 58.929 43.478 0.00 0.00 0.00 2.82
394 395 4.067896 GCTTCACTGAGGTCTTTCATTGA 58.932 43.478 0.00 0.00 35.69 2.57
395 396 4.516698 GCTTCACTGAGGTCTTTCATTGAA 59.483 41.667 8.04 8.04 41.51 2.69
396 397 5.009010 GCTTCACTGAGGTCTTTCATTGAAA 59.991 40.000 11.19 11.19 42.45 2.69
397 398 6.460123 GCTTCACTGAGGTCTTTCATTGAAAA 60.460 38.462 12.62 2.45 42.45 2.29
398 399 7.403312 TTCACTGAGGTCTTTCATTGAAAAA 57.597 32.000 12.62 0.00 41.11 1.94
399 400 6.795399 TCACTGAGGTCTTTCATTGAAAAAC 58.205 36.000 12.62 9.78 34.89 2.43
400 401 6.603201 TCACTGAGGTCTTTCATTGAAAAACT 59.397 34.615 13.70 11.67 34.89 2.66
401 402 7.122650 TCACTGAGGTCTTTCATTGAAAAACTT 59.877 33.333 13.70 7.58 34.89 2.66
402 403 7.761249 CACTGAGGTCTTTCATTGAAAAACTTT 59.239 33.333 13.70 4.76 31.51 2.66
403 404 8.314021 ACTGAGGTCTTTCATTGAAAAACTTTT 58.686 29.630 13.70 2.72 30.84 2.27
404 405 9.801873 CTGAGGTCTTTCATTGAAAAACTTTTA 57.198 29.630 13.70 2.07 30.84 1.52
428 429 9.561069 TTATTCAAGTATCCTTTTATGCTCTCC 57.439 33.333 0.00 0.00 0.00 3.71
429 430 6.560003 TCAAGTATCCTTTTATGCTCTCCA 57.440 37.500 0.00 0.00 0.00 3.86
430 431 6.586344 TCAAGTATCCTTTTATGCTCTCCAG 58.414 40.000 0.00 0.00 0.00 3.86
431 432 6.384015 TCAAGTATCCTTTTATGCTCTCCAGA 59.616 38.462 0.00 0.00 0.00 3.86
432 433 6.814954 AGTATCCTTTTATGCTCTCCAGAA 57.185 37.500 0.00 0.00 0.00 3.02
433 434 7.200434 AGTATCCTTTTATGCTCTCCAGAAA 57.800 36.000 0.00 0.00 33.15 2.52
434 435 7.810260 AGTATCCTTTTATGCTCTCCAGAAAT 58.190 34.615 0.00 0.00 34.87 2.17
435 436 8.277918 AGTATCCTTTTATGCTCTCCAGAAATT 58.722 33.333 0.00 0.00 34.87 1.82
436 437 7.579761 ATCCTTTTATGCTCTCCAGAAATTC 57.420 36.000 0.00 0.00 34.87 2.17
437 438 6.725364 TCCTTTTATGCTCTCCAGAAATTCT 58.275 36.000 0.00 0.00 34.87 2.40
438 439 7.861629 TCCTTTTATGCTCTCCAGAAATTCTA 58.138 34.615 0.00 0.00 34.87 2.10
439 440 8.497745 TCCTTTTATGCTCTCCAGAAATTCTAT 58.502 33.333 0.00 0.00 34.87 1.98
440 441 9.784531 CCTTTTATGCTCTCCAGAAATTCTATA 57.215 33.333 0.00 0.00 34.87 1.31
447 448 9.857656 TGCTCTCCAGAAATTCTATATCATTTT 57.142 29.630 0.00 0.00 0.00 1.82
513 514 0.522180 CTACGCTACCCGCTATCCTG 59.478 60.000 0.00 0.00 41.76 3.86
540 673 1.790387 GCGCTCGCAAGTGATTTCT 59.210 52.632 9.59 0.00 41.49 2.52
595 728 0.813610 TGCTGTCAACTGGTCAACCG 60.814 55.000 0.00 0.00 39.43 4.44
640 773 1.153568 GGCTGACGCTGCATGACTA 60.154 57.895 0.00 0.00 36.09 2.59
805 962 2.363018 CAGCGACCCTCCTCTCCA 60.363 66.667 0.00 0.00 0.00 3.86
1268 1726 5.617751 GCAAGACAATGCTTTTGAGTATCGT 60.618 40.000 6.92 0.00 43.06 3.73
1567 2031 0.395686 AGCATCATATGGCGCTGAGT 59.604 50.000 16.11 0.00 32.33 3.41
1569 2033 1.875157 GCATCATATGGCGCTGAGTGA 60.875 52.381 7.64 7.95 0.00 3.41
1652 2116 3.676093 CAGAAAGACTGTAAGGGAACCC 58.324 50.000 0.94 0.94 45.84 4.11
1653 2117 3.559384 CAGAAAGACTGTAAGGGAACCCC 60.559 52.174 6.23 0.00 45.84 4.95
1670 2134 7.284919 GGAACCCCTTACATTATAATTGGTG 57.715 40.000 0.00 0.00 0.00 4.17
1671 2135 6.239204 GGAACCCCTTACATTATAATTGGTGC 60.239 42.308 0.00 0.00 0.00 5.01
1672 2136 5.772004 ACCCCTTACATTATAATTGGTGCA 58.228 37.500 0.00 0.00 0.00 4.57
1673 2137 6.198639 ACCCCTTACATTATAATTGGTGCAA 58.801 36.000 0.00 0.00 0.00 4.08
1674 2138 6.097696 ACCCCTTACATTATAATTGGTGCAAC 59.902 38.462 0.00 0.00 0.00 4.17
1675 2139 6.097554 CCCCTTACATTATAATTGGTGCAACA 59.902 38.462 0.00 0.00 39.98 3.33
1676 2140 7.364232 CCCCTTACATTATAATTGGTGCAACAA 60.364 37.037 21.46 21.46 39.98 2.83
1677 2141 8.037758 CCCTTACATTATAATTGGTGCAACAAA 58.962 33.333 23.14 6.25 39.98 2.83
1678 2142 8.868916 CCTTACATTATAATTGGTGCAACAAAC 58.131 33.333 23.14 0.00 39.98 2.93
1679 2143 8.764524 TTACATTATAATTGGTGCAACAAACC 57.235 30.769 23.14 1.54 39.98 3.27
1680 2144 6.169800 ACATTATAATTGGTGCAACAAACCC 58.830 36.000 23.14 0.66 39.98 4.11
1681 2145 5.808366 TTATAATTGGTGCAACAAACCCA 57.192 34.783 23.14 3.95 39.98 4.51
1682 2146 4.696479 ATAATTGGTGCAACAAACCCAA 57.304 36.364 23.14 14.03 39.98 4.12
1683 2147 3.356529 AATTGGTGCAACAAACCCAAA 57.643 38.095 23.14 0.00 40.16 3.28
1684 2148 3.574354 ATTGGTGCAACAAACCCAAAT 57.426 38.095 23.14 0.00 40.16 2.32
1685 2149 3.356529 TTGGTGCAACAAACCCAAATT 57.643 38.095 16.46 0.00 39.98 1.82
1686 2150 2.636830 TGGTGCAACAAACCCAAATTG 58.363 42.857 0.00 0.00 39.98 2.32
1687 2151 1.333308 GGTGCAACAAACCCAAATTGC 59.667 47.619 0.00 0.94 46.08 3.56
1690 2154 3.337301 GCAACAAACCCAAATTGCAAG 57.663 42.857 4.94 0.00 45.38 4.01
1691 2155 2.682352 GCAACAAACCCAAATTGCAAGT 59.318 40.909 4.94 0.00 45.38 3.16
1692 2156 3.873952 GCAACAAACCCAAATTGCAAGTA 59.126 39.130 4.94 0.00 45.38 2.24
1693 2157 4.260579 GCAACAAACCCAAATTGCAAGTAC 60.261 41.667 4.94 0.00 45.38 2.73
1694 2158 4.066646 ACAAACCCAAATTGCAAGTACC 57.933 40.909 4.94 0.00 0.00 3.34
1695 2159 3.452627 ACAAACCCAAATTGCAAGTACCA 59.547 39.130 4.94 0.00 0.00 3.25
1696 2160 4.102367 ACAAACCCAAATTGCAAGTACCAT 59.898 37.500 4.94 0.00 0.00 3.55
1697 2161 3.959535 ACCCAAATTGCAAGTACCATG 57.040 42.857 4.94 0.00 0.00 3.66
1698 2162 2.028203 ACCCAAATTGCAAGTACCATGC 60.028 45.455 4.94 12.96 44.08 4.06
1699 2163 2.620242 CCAAATTGCAAGTACCATGCC 58.380 47.619 16.17 2.49 43.16 4.40
1700 2164 2.234414 CCAAATTGCAAGTACCATGCCT 59.766 45.455 16.17 3.91 43.16 4.75
1701 2165 3.306919 CCAAATTGCAAGTACCATGCCTT 60.307 43.478 16.17 8.78 43.16 4.35
1702 2166 3.598019 AATTGCAAGTACCATGCCTTG 57.402 42.857 16.17 11.51 43.16 3.61
1703 2167 2.284754 TTGCAAGTACCATGCCTTGA 57.715 45.000 16.17 0.00 43.16 3.02
1704 2168 2.284754 TGCAAGTACCATGCCTTGAA 57.715 45.000 16.17 7.93 43.16 2.69
1705 2169 1.885887 TGCAAGTACCATGCCTTGAAC 59.114 47.619 16.17 5.82 43.16 3.18
1706 2170 1.202348 GCAAGTACCATGCCTTGAACC 59.798 52.381 17.22 2.20 40.36 3.62
1707 2171 2.795329 CAAGTACCATGCCTTGAACCT 58.205 47.619 10.72 0.00 40.36 3.50
1708 2172 2.489329 CAAGTACCATGCCTTGAACCTG 59.511 50.000 10.72 0.00 40.36 4.00
1709 2173 1.004745 AGTACCATGCCTTGAACCTGG 59.995 52.381 0.00 0.00 0.00 4.45
1710 2174 0.331278 TACCATGCCTTGAACCTGGG 59.669 55.000 0.00 0.00 0.00 4.45
1711 2175 1.077265 CCATGCCTTGAACCTGGGT 59.923 57.895 0.00 0.00 0.00 4.51
1712 2176 1.252904 CCATGCCTTGAACCTGGGTG 61.253 60.000 0.00 0.00 0.00 4.61
1713 2177 1.077265 ATGCCTTGAACCTGGGTGG 59.923 57.895 0.00 0.00 42.93 4.61
1714 2178 2.283173 GCCTTGAACCTGGGTGGG 60.283 66.667 0.00 0.00 41.11 4.61
1715 2179 3.146828 GCCTTGAACCTGGGTGGGT 62.147 63.158 0.00 0.00 42.05 4.51
1716 2180 1.228552 CCTTGAACCTGGGTGGGTG 60.229 63.158 0.00 0.00 39.85 4.61
1717 2181 1.228552 CTTGAACCTGGGTGGGTGG 60.229 63.158 0.00 0.00 39.85 4.61
1718 2182 2.713531 CTTGAACCTGGGTGGGTGGG 62.714 65.000 0.00 0.00 39.85 4.61
1719 2183 2.856988 GAACCTGGGTGGGTGGGA 60.857 66.667 0.00 0.00 39.85 4.37
1720 2184 2.370403 AACCTGGGTGGGTGGGAA 60.370 61.111 0.00 0.00 39.85 3.97
1721 2185 2.426305 GAACCTGGGTGGGTGGGAAG 62.426 65.000 0.00 0.00 39.85 3.46
1722 2186 3.661648 CCTGGGTGGGTGGGAAGG 61.662 72.222 0.00 0.00 0.00 3.46
1723 2187 4.366684 CTGGGTGGGTGGGAAGGC 62.367 72.222 0.00 0.00 0.00 4.35
1725 2189 3.672503 GGGTGGGTGGGAAGGCAT 61.673 66.667 0.00 0.00 0.00 4.40
1726 2190 2.043953 GGTGGGTGGGAAGGCATC 60.044 66.667 0.00 0.00 0.00 3.91
1727 2191 2.763215 GTGGGTGGGAAGGCATCA 59.237 61.111 0.00 0.00 0.00 3.07
1728 2192 1.379044 GTGGGTGGGAAGGCATCAG 60.379 63.158 0.00 0.00 0.00 2.90
1729 2193 2.440980 GGGTGGGAAGGCATCAGC 60.441 66.667 0.00 0.00 41.10 4.26
1739 2203 2.440980 GCATCAGCCCCTTCCCAC 60.441 66.667 0.00 0.00 33.58 4.61
1740 2204 2.276740 CATCAGCCCCTTCCCACC 59.723 66.667 0.00 0.00 0.00 4.61
1741 2205 2.204291 ATCAGCCCCTTCCCACCA 60.204 61.111 0.00 0.00 0.00 4.17
1742 2206 2.616458 ATCAGCCCCTTCCCACCAC 61.616 63.158 0.00 0.00 0.00 4.16
1743 2207 3.260100 CAGCCCCTTCCCACCACT 61.260 66.667 0.00 0.00 0.00 4.00
1744 2208 1.923395 CAGCCCCTTCCCACCACTA 60.923 63.158 0.00 0.00 0.00 2.74
1745 2209 1.616628 AGCCCCTTCCCACCACTAG 60.617 63.158 0.00 0.00 0.00 2.57
1746 2210 2.680370 GCCCCTTCCCACCACTAGG 61.680 68.421 0.00 0.00 42.21 3.02
1747 2211 2.680370 CCCCTTCCCACCACTAGGC 61.680 68.421 0.00 0.00 39.06 3.93
1748 2212 1.616628 CCCTTCCCACCACTAGGCT 60.617 63.158 0.00 0.00 39.06 4.58
1749 2213 0.326238 CCCTTCCCACCACTAGGCTA 60.326 60.000 0.00 0.00 39.06 3.93
1750 2214 1.695989 CCCTTCCCACCACTAGGCTAT 60.696 57.143 0.00 0.00 39.06 2.97
1751 2215 1.417890 CCTTCCCACCACTAGGCTATG 59.582 57.143 0.00 0.00 39.06 2.23
1752 2216 0.837272 TTCCCACCACTAGGCTATGC 59.163 55.000 0.00 0.00 39.06 3.14
1763 2227 3.314083 GGCTATGCCTTAGTCTGCC 57.686 57.895 0.73 0.00 46.69 4.85
1764 2228 0.761802 GGCTATGCCTTAGTCTGCCT 59.238 55.000 0.73 0.00 46.69 4.75
1765 2229 1.270571 GGCTATGCCTTAGTCTGCCTC 60.271 57.143 0.73 0.00 46.69 4.70
1766 2230 1.691434 GCTATGCCTTAGTCTGCCTCT 59.309 52.381 0.00 0.00 0.00 3.69
1767 2231 2.547642 GCTATGCCTTAGTCTGCCTCTG 60.548 54.545 0.00 0.00 0.00 3.35
1768 2232 1.577736 ATGCCTTAGTCTGCCTCTGT 58.422 50.000 0.00 0.00 0.00 3.41
1769 2233 2.231716 TGCCTTAGTCTGCCTCTGTA 57.768 50.000 0.00 0.00 0.00 2.74
1770 2234 2.752030 TGCCTTAGTCTGCCTCTGTAT 58.248 47.619 0.00 0.00 0.00 2.29
1771 2235 3.107601 TGCCTTAGTCTGCCTCTGTATT 58.892 45.455 0.00 0.00 0.00 1.89
1772 2236 4.286707 TGCCTTAGTCTGCCTCTGTATTA 58.713 43.478 0.00 0.00 0.00 0.98
1773 2237 4.901849 TGCCTTAGTCTGCCTCTGTATTAT 59.098 41.667 0.00 0.00 0.00 1.28
1909 2393 5.997385 TCGGAGCTTTTAGTTTGTTTGATC 58.003 37.500 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.272144 ACCTGAAAAGGACTAAGGATATGTT 57.728 36.000 0.00 0.00 0.00 2.71
1 2 6.893020 ACCTGAAAAGGACTAAGGATATGT 57.107 37.500 0.00 0.00 0.00 2.29
2 3 9.853177 AAATACCTGAAAAGGACTAAGGATATG 57.147 33.333 0.00 0.00 0.00 1.78
5 6 7.928873 TGAAATACCTGAAAAGGACTAAGGAT 58.071 34.615 0.00 0.00 0.00 3.24
6 7 7.324388 TGAAATACCTGAAAAGGACTAAGGA 57.676 36.000 0.00 0.00 0.00 3.36
7 8 6.599638 CCTGAAATACCTGAAAAGGACTAAGG 59.400 42.308 0.00 0.00 0.00 2.69
8 9 7.394816 TCCTGAAATACCTGAAAAGGACTAAG 58.605 38.462 0.00 0.00 0.00 2.18
9 10 7.324388 TCCTGAAATACCTGAAAAGGACTAA 57.676 36.000 0.00 0.00 0.00 2.24
10 11 6.945636 TCCTGAAATACCTGAAAAGGACTA 57.054 37.500 0.00 0.00 0.00 2.59
11 12 5.843019 TCCTGAAATACCTGAAAAGGACT 57.157 39.130 0.00 0.00 0.00 3.85
12 13 5.946377 ACATCCTGAAATACCTGAAAAGGAC 59.054 40.000 0.00 0.00 35.28 3.85
13 14 6.139679 ACATCCTGAAATACCTGAAAAGGA 57.860 37.500 0.00 0.00 36.81 3.36
14 15 6.660949 AGAACATCCTGAAATACCTGAAAAGG 59.339 38.462 0.00 0.00 0.00 3.11
15 16 7.693969 AGAACATCCTGAAATACCTGAAAAG 57.306 36.000 0.00 0.00 0.00 2.27
16 17 7.723616 TCAAGAACATCCTGAAATACCTGAAAA 59.276 33.333 0.00 0.00 0.00 2.29
17 18 7.174946 GTCAAGAACATCCTGAAATACCTGAAA 59.825 37.037 0.00 0.00 0.00 2.69
18 19 6.655003 GTCAAGAACATCCTGAAATACCTGAA 59.345 38.462 0.00 0.00 0.00 3.02
19 20 6.173339 GTCAAGAACATCCTGAAATACCTGA 58.827 40.000 0.00 0.00 0.00 3.86
20 21 5.355350 GGTCAAGAACATCCTGAAATACCTG 59.645 44.000 0.00 0.00 0.00 4.00
21 22 5.501156 GGTCAAGAACATCCTGAAATACCT 58.499 41.667 0.00 0.00 0.00 3.08
22 23 4.332819 CGGTCAAGAACATCCTGAAATACC 59.667 45.833 0.00 0.00 0.00 2.73
23 24 4.935808 ACGGTCAAGAACATCCTGAAATAC 59.064 41.667 0.00 0.00 0.00 1.89
24 25 5.160607 ACGGTCAAGAACATCCTGAAATA 57.839 39.130 0.00 0.00 0.00 1.40
25 26 4.021102 ACGGTCAAGAACATCCTGAAAT 57.979 40.909 0.00 0.00 0.00 2.17
26 27 3.485463 ACGGTCAAGAACATCCTGAAA 57.515 42.857 0.00 0.00 0.00 2.69
27 28 3.138304 CAACGGTCAAGAACATCCTGAA 58.862 45.455 0.00 0.00 0.00 3.02
28 29 2.104111 ACAACGGTCAAGAACATCCTGA 59.896 45.455 0.00 0.00 0.00 3.86
29 30 2.480419 GACAACGGTCAAGAACATCCTG 59.520 50.000 0.00 0.00 43.73 3.86
30 31 2.550208 GGACAACGGTCAAGAACATCCT 60.550 50.000 0.00 0.00 46.17 3.24
31 32 1.804748 GGACAACGGTCAAGAACATCC 59.195 52.381 0.00 0.00 46.17 3.51
32 33 2.480419 CTGGACAACGGTCAAGAACATC 59.520 50.000 0.00 0.00 46.38 3.06
33 34 2.158813 ACTGGACAACGGTCAAGAACAT 60.159 45.455 6.25 0.00 46.38 2.71
34 35 1.208535 ACTGGACAACGGTCAAGAACA 59.791 47.619 6.25 0.00 46.38 3.18
35 36 1.597663 CACTGGACAACGGTCAAGAAC 59.402 52.381 6.25 0.00 46.38 3.01
36 37 1.483004 TCACTGGACAACGGTCAAGAA 59.517 47.619 6.25 0.00 46.38 2.52
37 38 1.116308 TCACTGGACAACGGTCAAGA 58.884 50.000 6.25 0.00 46.38 3.02
39 40 1.270625 GGATCACTGGACAACGGTCAA 60.271 52.381 0.00 0.00 46.17 3.18
40 41 0.320374 GGATCACTGGACAACGGTCA 59.680 55.000 0.00 0.00 46.17 4.02
41 42 0.320374 TGGATCACTGGACAACGGTC 59.680 55.000 0.00 0.00 43.55 4.79
42 43 0.034896 GTGGATCACTGGACAACGGT 59.965 55.000 0.00 0.00 40.00 4.83
43 44 0.321671 AGTGGATCACTGGACAACGG 59.678 55.000 0.00 0.00 43.63 4.44
44 45 1.673033 GGAGTGGATCACTGGACAACG 60.673 57.143 5.20 0.00 45.44 4.10
45 46 1.625818 AGGAGTGGATCACTGGACAAC 59.374 52.381 5.20 0.00 45.44 3.32
46 47 1.625315 CAGGAGTGGATCACTGGACAA 59.375 52.381 5.20 0.00 45.44 3.18
47 48 1.269958 CAGGAGTGGATCACTGGACA 58.730 55.000 5.20 0.00 45.44 4.02
58 59 3.721087 ACCAAAGTAATCCAGGAGTGG 57.279 47.619 0.00 0.50 46.63 4.00
59 60 4.225267 AGGTACCAAAGTAATCCAGGAGTG 59.775 45.833 15.94 0.00 0.00 3.51
60 61 4.436079 AGGTACCAAAGTAATCCAGGAGT 58.564 43.478 15.94 0.00 0.00 3.85
61 62 4.141688 GGAGGTACCAAAGTAATCCAGGAG 60.142 50.000 15.94 0.00 36.92 3.69
62 63 3.778629 GGAGGTACCAAAGTAATCCAGGA 59.221 47.826 15.94 0.00 36.92 3.86
63 64 3.118000 GGGAGGTACCAAAGTAATCCAGG 60.118 52.174 15.94 0.00 37.93 4.45
64 65 3.780850 AGGGAGGTACCAAAGTAATCCAG 59.219 47.826 15.94 0.00 37.93 3.86
65 66 3.521937 CAGGGAGGTACCAAAGTAATCCA 59.478 47.826 15.94 0.00 37.93 3.41
66 67 3.684697 GCAGGGAGGTACCAAAGTAATCC 60.685 52.174 15.94 10.09 41.20 3.01
67 68 3.200165 AGCAGGGAGGTACCAAAGTAATC 59.800 47.826 15.94 0.07 41.20 1.75
68 69 3.190439 AGCAGGGAGGTACCAAAGTAAT 58.810 45.455 15.94 0.00 41.20 1.89
69 70 2.627933 AGCAGGGAGGTACCAAAGTAA 58.372 47.619 15.94 0.00 41.20 2.24
70 71 2.337359 AGCAGGGAGGTACCAAAGTA 57.663 50.000 15.94 0.00 41.20 2.24
71 72 2.337359 TAGCAGGGAGGTACCAAAGT 57.663 50.000 15.94 0.00 41.20 2.66
72 73 3.009143 AGTTTAGCAGGGAGGTACCAAAG 59.991 47.826 15.94 0.00 41.20 2.77
73 74 2.983898 AGTTTAGCAGGGAGGTACCAAA 59.016 45.455 15.94 0.00 41.20 3.28
74 75 2.627933 AGTTTAGCAGGGAGGTACCAA 58.372 47.619 15.94 0.00 41.20 3.67
75 76 2.337359 AGTTTAGCAGGGAGGTACCA 57.663 50.000 15.94 0.00 41.20 3.25
76 77 5.511031 GCTATTAGTTTAGCAGGGAGGTACC 60.511 48.000 2.73 2.73 43.33 3.34
77 78 5.539979 GCTATTAGTTTAGCAGGGAGGTAC 58.460 45.833 0.00 0.00 43.33 3.34
78 79 5.803237 GCTATTAGTTTAGCAGGGAGGTA 57.197 43.478 0.00 0.00 43.33 3.08
79 80 4.691326 GCTATTAGTTTAGCAGGGAGGT 57.309 45.455 0.00 0.00 43.33 3.85
87 88 4.394920 TGTGTGCCTTGCTATTAGTTTAGC 59.605 41.667 0.00 0.00 43.98 3.09
88 89 6.316140 TGATGTGTGCCTTGCTATTAGTTTAG 59.684 38.462 0.00 0.00 0.00 1.85
89 90 6.176896 TGATGTGTGCCTTGCTATTAGTTTA 58.823 36.000 0.00 0.00 0.00 2.01
90 91 5.009631 TGATGTGTGCCTTGCTATTAGTTT 58.990 37.500 0.00 0.00 0.00 2.66
91 92 4.588899 TGATGTGTGCCTTGCTATTAGTT 58.411 39.130 0.00 0.00 0.00 2.24
92 93 4.220693 TGATGTGTGCCTTGCTATTAGT 57.779 40.909 0.00 0.00 0.00 2.24
93 94 4.637534 ACTTGATGTGTGCCTTGCTATTAG 59.362 41.667 0.00 0.00 0.00 1.73
94 95 4.588899 ACTTGATGTGTGCCTTGCTATTA 58.411 39.130 0.00 0.00 0.00 0.98
95 96 3.424703 ACTTGATGTGTGCCTTGCTATT 58.575 40.909 0.00 0.00 0.00 1.73
96 97 3.012518 GACTTGATGTGTGCCTTGCTAT 58.987 45.455 0.00 0.00 0.00 2.97
97 98 2.038952 AGACTTGATGTGTGCCTTGCTA 59.961 45.455 0.00 0.00 0.00 3.49
98 99 1.202855 AGACTTGATGTGTGCCTTGCT 60.203 47.619 0.00 0.00 0.00 3.91
99 100 1.068748 CAGACTTGATGTGTGCCTTGC 60.069 52.381 0.00 0.00 33.16 4.01
100 101 1.538512 CCAGACTTGATGTGTGCCTTG 59.461 52.381 0.00 0.00 38.47 3.61
101 102 1.143684 ACCAGACTTGATGTGTGCCTT 59.856 47.619 0.00 0.00 38.47 4.35
102 103 0.767375 ACCAGACTTGATGTGTGCCT 59.233 50.000 0.00 0.00 38.47 4.75
103 104 2.076863 GTACCAGACTTGATGTGTGCC 58.923 52.381 0.00 0.00 38.47 5.01
104 105 2.480419 GTGTACCAGACTTGATGTGTGC 59.520 50.000 0.00 0.00 38.47 4.57
105 106 3.727726 TGTGTACCAGACTTGATGTGTG 58.272 45.455 0.00 0.00 39.38 3.82
106 107 3.803715 GCTGTGTACCAGACTTGATGTGT 60.804 47.826 13.57 0.00 44.49 3.72
107 108 2.738846 GCTGTGTACCAGACTTGATGTG 59.261 50.000 13.57 0.00 44.49 3.21
108 109 2.368548 TGCTGTGTACCAGACTTGATGT 59.631 45.455 13.57 0.00 44.49 3.06
109 110 3.044235 TGCTGTGTACCAGACTTGATG 57.956 47.619 13.57 0.00 44.49 3.07
110 111 3.988976 ATGCTGTGTACCAGACTTGAT 57.011 42.857 13.57 0.00 44.49 2.57
111 112 3.402110 CAATGCTGTGTACCAGACTTGA 58.598 45.455 13.57 0.00 44.49 3.02
112 113 2.095567 GCAATGCTGTGTACCAGACTTG 60.096 50.000 13.57 14.26 44.49 3.16
113 114 2.154462 GCAATGCTGTGTACCAGACTT 58.846 47.619 13.57 4.94 44.49 3.01
114 115 1.072173 TGCAATGCTGTGTACCAGACT 59.928 47.619 6.82 0.00 44.49 3.24
115 116 1.522668 TGCAATGCTGTGTACCAGAC 58.477 50.000 6.82 7.01 44.49 3.51
116 117 2.495155 ATGCAATGCTGTGTACCAGA 57.505 45.000 6.82 2.30 44.49 3.86
117 118 3.009026 TGTATGCAATGCTGTGTACCAG 58.991 45.455 6.82 6.91 44.53 4.00
118 119 3.064900 TGTATGCAATGCTGTGTACCA 57.935 42.857 6.82 0.00 0.00 3.25
119 120 3.627123 TCATGTATGCAATGCTGTGTACC 59.373 43.478 6.82 0.00 0.00 3.34
120 121 4.880886 TCATGTATGCAATGCTGTGTAC 57.119 40.909 6.82 5.40 0.00 2.90
121 122 6.523840 TCTATCATGTATGCAATGCTGTGTA 58.476 36.000 6.82 0.00 0.00 2.90
122 123 5.370679 TCTATCATGTATGCAATGCTGTGT 58.629 37.500 6.82 0.00 0.00 3.72
123 124 5.617087 GCTCTATCATGTATGCAATGCTGTG 60.617 44.000 6.82 0.00 0.00 3.66
124 125 4.454847 GCTCTATCATGTATGCAATGCTGT 59.545 41.667 6.82 0.00 0.00 4.40
125 126 4.142665 GGCTCTATCATGTATGCAATGCTG 60.143 45.833 6.82 0.00 0.00 4.41
126 127 4.008330 GGCTCTATCATGTATGCAATGCT 58.992 43.478 6.82 0.00 0.00 3.79
127 128 4.008330 AGGCTCTATCATGTATGCAATGC 58.992 43.478 0.00 0.00 0.00 3.56
128 129 7.171167 GCTATAGGCTCTATCATGTATGCAATG 59.829 40.741 1.04 0.00 38.06 2.82
129 130 7.215789 GCTATAGGCTCTATCATGTATGCAAT 58.784 38.462 1.04 0.00 38.06 3.56
130 131 6.577103 GCTATAGGCTCTATCATGTATGCAA 58.423 40.000 1.04 0.00 38.06 4.08
131 132 6.154203 GCTATAGGCTCTATCATGTATGCA 57.846 41.667 1.04 0.00 38.06 3.96
146 147 2.834549 TCCCTATGCTTCAGCTATAGGC 59.165 50.000 20.81 4.97 43.27 3.93
147 148 4.530161 AGTTCCCTATGCTTCAGCTATAGG 59.470 45.833 19.99 19.99 43.69 2.57
148 149 5.736951 AGTTCCCTATGCTTCAGCTATAG 57.263 43.478 0.00 0.00 42.66 1.31
149 150 5.841237 AGAAGTTCCCTATGCTTCAGCTATA 59.159 40.000 0.00 0.00 40.57 1.31
150 151 4.657969 AGAAGTTCCCTATGCTTCAGCTAT 59.342 41.667 0.00 0.00 40.57 2.97
151 152 4.033709 AGAAGTTCCCTATGCTTCAGCTA 58.966 43.478 0.00 0.00 40.57 3.32
152 153 2.843113 AGAAGTTCCCTATGCTTCAGCT 59.157 45.455 0.00 0.00 40.57 4.24
153 154 3.274095 AGAAGTTCCCTATGCTTCAGC 57.726 47.619 0.00 0.00 40.57 4.26
154 155 5.248640 TGAAAGAAGTTCCCTATGCTTCAG 58.751 41.667 0.00 0.00 40.57 3.02
155 156 5.241403 TGAAAGAAGTTCCCTATGCTTCA 57.759 39.130 0.00 0.00 40.57 3.02
156 157 6.765915 AATGAAAGAAGTTCCCTATGCTTC 57.234 37.500 0.00 0.00 38.97 3.86
157 158 7.452813 AGAAAATGAAAGAAGTTCCCTATGCTT 59.547 33.333 0.00 0.00 35.12 3.91
158 159 6.950619 AGAAAATGAAAGAAGTTCCCTATGCT 59.049 34.615 0.00 0.00 35.12 3.79
159 160 7.121907 AGAGAAAATGAAAGAAGTTCCCTATGC 59.878 37.037 0.00 0.00 35.12 3.14
160 161 8.572855 AGAGAAAATGAAAGAAGTTCCCTATG 57.427 34.615 0.00 0.00 35.12 2.23
161 162 8.610369 AGAGAGAAAATGAAAGAAGTTCCCTAT 58.390 33.333 0.00 0.00 35.12 2.57
162 163 7.978925 AGAGAGAAAATGAAAGAAGTTCCCTA 58.021 34.615 0.00 0.00 35.12 3.53
163 164 6.846988 AGAGAGAAAATGAAAGAAGTTCCCT 58.153 36.000 0.00 0.00 35.12 4.20
164 165 8.800370 ATAGAGAGAAAATGAAAGAAGTTCCC 57.200 34.615 0.00 0.00 35.12 3.97
165 166 9.665719 AGATAGAGAGAAAATGAAAGAAGTTCC 57.334 33.333 0.00 0.00 35.12 3.62
170 171 9.160496 GCAGAAGATAGAGAGAAAATGAAAGAA 57.840 33.333 0.00 0.00 0.00 2.52
171 172 8.316946 TGCAGAAGATAGAGAGAAAATGAAAGA 58.683 33.333 0.00 0.00 0.00 2.52
172 173 8.489990 TGCAGAAGATAGAGAGAAAATGAAAG 57.510 34.615 0.00 0.00 0.00 2.62
173 174 8.099537 ACTGCAGAAGATAGAGAGAAAATGAAA 58.900 33.333 23.35 0.00 0.00 2.69
174 175 7.548427 CACTGCAGAAGATAGAGAGAAAATGAA 59.452 37.037 23.35 0.00 0.00 2.57
175 176 7.040494 CACTGCAGAAGATAGAGAGAAAATGA 58.960 38.462 23.35 0.00 0.00 2.57
176 177 6.258287 CCACTGCAGAAGATAGAGAGAAAATG 59.742 42.308 23.35 1.08 0.00 2.32
177 178 6.070309 ACCACTGCAGAAGATAGAGAGAAAAT 60.070 38.462 23.35 0.00 0.00 1.82
178 179 5.247110 ACCACTGCAGAAGATAGAGAGAAAA 59.753 40.000 23.35 0.00 0.00 2.29
179 180 4.774726 ACCACTGCAGAAGATAGAGAGAAA 59.225 41.667 23.35 0.00 0.00 2.52
180 181 4.348486 ACCACTGCAGAAGATAGAGAGAA 58.652 43.478 23.35 0.00 0.00 2.87
181 182 3.951037 GACCACTGCAGAAGATAGAGAGA 59.049 47.826 23.35 0.00 0.00 3.10
182 183 3.243035 CGACCACTGCAGAAGATAGAGAG 60.243 52.174 23.35 0.56 0.00 3.20
183 184 2.685388 CGACCACTGCAGAAGATAGAGA 59.315 50.000 23.35 0.00 0.00 3.10
184 185 2.223688 CCGACCACTGCAGAAGATAGAG 60.224 54.545 23.35 3.62 0.00 2.43
185 186 1.751351 CCGACCACTGCAGAAGATAGA 59.249 52.381 23.35 0.00 0.00 1.98
186 187 1.751351 TCCGACCACTGCAGAAGATAG 59.249 52.381 23.35 6.79 0.00 2.08
187 188 1.476891 GTCCGACCACTGCAGAAGATA 59.523 52.381 23.35 0.00 0.00 1.98
188 189 0.247736 GTCCGACCACTGCAGAAGAT 59.752 55.000 23.35 0.00 0.00 2.40
189 190 1.112916 TGTCCGACCACTGCAGAAGA 61.113 55.000 23.35 4.42 0.00 2.87
190 191 0.036952 ATGTCCGACCACTGCAGAAG 60.037 55.000 23.35 13.47 0.00 2.85
191 192 0.396435 AATGTCCGACCACTGCAGAA 59.604 50.000 23.35 0.00 0.00 3.02
192 193 0.320683 CAATGTCCGACCACTGCAGA 60.321 55.000 23.35 0.00 0.00 4.26
193 194 0.320683 TCAATGTCCGACCACTGCAG 60.321 55.000 13.48 13.48 0.00 4.41
194 195 0.320683 CTCAATGTCCGACCACTGCA 60.321 55.000 0.00 0.00 0.00 4.41
195 196 0.320771 ACTCAATGTCCGACCACTGC 60.321 55.000 0.00 0.00 0.00 4.40
196 197 1.273606 AGACTCAATGTCCGACCACTG 59.726 52.381 0.00 0.00 46.46 3.66
197 198 1.273606 CAGACTCAATGTCCGACCACT 59.726 52.381 0.00 0.00 46.46 4.00
198 199 1.272490 TCAGACTCAATGTCCGACCAC 59.728 52.381 0.00 0.00 46.46 4.16
199 200 1.272490 GTCAGACTCAATGTCCGACCA 59.728 52.381 0.00 0.00 43.65 4.02
200 201 1.997669 GTCAGACTCAATGTCCGACC 58.002 55.000 0.00 0.00 43.65 4.79
211 212 4.636249 AGGTGTGAAATTGAGTCAGACTC 58.364 43.478 22.09 22.09 45.26 3.36
212 213 4.696479 AGGTGTGAAATTGAGTCAGACT 57.304 40.909 1.46 1.46 38.84 3.24
213 214 4.576463 ACAAGGTGTGAAATTGAGTCAGAC 59.424 41.667 0.00 0.00 38.28 3.51
214 215 4.780815 ACAAGGTGTGAAATTGAGTCAGA 58.219 39.130 0.00 0.00 0.00 3.27
215 216 6.808008 ATACAAGGTGTGAAATTGAGTCAG 57.192 37.500 0.00 0.00 0.00 3.51
216 217 7.717436 TGTAATACAAGGTGTGAAATTGAGTCA 59.283 33.333 0.00 0.00 0.00 3.41
217 218 8.094798 TGTAATACAAGGTGTGAAATTGAGTC 57.905 34.615 0.00 0.00 0.00 3.36
218 219 7.174946 CCTGTAATACAAGGTGTGAAATTGAGT 59.825 37.037 0.00 0.00 0.00 3.41
219 220 7.530010 CCTGTAATACAAGGTGTGAAATTGAG 58.470 38.462 0.00 0.00 0.00 3.02
220 221 6.072175 GCCTGTAATACAAGGTGTGAAATTGA 60.072 38.462 9.49 0.00 0.00 2.57
221 222 6.092748 GCCTGTAATACAAGGTGTGAAATTG 58.907 40.000 9.49 0.00 0.00 2.32
222 223 5.772672 TGCCTGTAATACAAGGTGTGAAATT 59.227 36.000 9.49 0.00 0.00 1.82
223 224 5.321102 TGCCTGTAATACAAGGTGTGAAAT 58.679 37.500 9.49 0.00 0.00 2.17
224 225 4.720046 TGCCTGTAATACAAGGTGTGAAA 58.280 39.130 9.49 0.00 0.00 2.69
225 226 4.359434 TGCCTGTAATACAAGGTGTGAA 57.641 40.909 9.49 0.00 0.00 3.18
226 227 4.041075 TCTTGCCTGTAATACAAGGTGTGA 59.959 41.667 9.49 4.51 40.90 3.58
227 228 4.323417 TCTTGCCTGTAATACAAGGTGTG 58.677 43.478 9.49 2.92 40.90 3.82
228 229 4.634012 TCTTGCCTGTAATACAAGGTGT 57.366 40.909 9.49 0.00 40.90 4.16
229 230 4.156008 GGTTCTTGCCTGTAATACAAGGTG 59.844 45.833 9.49 3.40 40.90 4.00
230 231 4.332828 GGTTCTTGCCTGTAATACAAGGT 58.667 43.478 9.49 0.00 40.90 3.50
231 232 3.694566 GGGTTCTTGCCTGTAATACAAGG 59.305 47.826 0.00 0.00 40.90 3.61
232 233 4.589908 AGGGTTCTTGCCTGTAATACAAG 58.410 43.478 0.00 0.00 41.70 3.16
233 234 4.650972 AGGGTTCTTGCCTGTAATACAA 57.349 40.909 0.00 0.00 0.00 2.41
234 235 4.650972 AAGGGTTCTTGCCTGTAATACA 57.349 40.909 0.00 0.00 0.00 2.29
235 236 5.254115 AGAAAGGGTTCTTGCCTGTAATAC 58.746 41.667 0.00 0.00 41.55 1.89
236 237 5.514500 AGAAAGGGTTCTTGCCTGTAATA 57.486 39.130 0.00 0.00 41.55 0.98
237 238 4.388577 AGAAAGGGTTCTTGCCTGTAAT 57.611 40.909 0.00 0.00 41.55 1.89
238 239 3.876309 AGAAAGGGTTCTTGCCTGTAA 57.124 42.857 0.00 0.00 41.55 2.41
247 248 3.829026 GGATCAAGCAAAGAAAGGGTTCT 59.171 43.478 0.00 0.00 46.47 3.01
248 249 3.573967 TGGATCAAGCAAAGAAAGGGTTC 59.426 43.478 0.00 0.00 0.00 3.62
249 250 3.575805 TGGATCAAGCAAAGAAAGGGTT 58.424 40.909 0.00 0.00 0.00 4.11
250 251 3.243359 TGGATCAAGCAAAGAAAGGGT 57.757 42.857 0.00 0.00 0.00 4.34
251 252 4.813750 AATGGATCAAGCAAAGAAAGGG 57.186 40.909 0.00 0.00 0.00 3.95
252 253 6.225318 TCAAAATGGATCAAGCAAAGAAAGG 58.775 36.000 0.00 0.00 0.00 3.11
253 254 7.440255 AGTTCAAAATGGATCAAGCAAAGAAAG 59.560 33.333 0.00 0.00 0.00 2.62
254 255 7.274447 AGTTCAAAATGGATCAAGCAAAGAAA 58.726 30.769 0.00 0.00 0.00 2.52
255 256 6.819284 AGTTCAAAATGGATCAAGCAAAGAA 58.181 32.000 0.00 0.00 0.00 2.52
256 257 6.409524 AGTTCAAAATGGATCAAGCAAAGA 57.590 33.333 0.00 0.00 0.00 2.52
257 258 7.486802 AAAGTTCAAAATGGATCAAGCAAAG 57.513 32.000 0.00 0.00 0.00 2.77
258 259 7.862512 AAAAGTTCAAAATGGATCAAGCAAA 57.137 28.000 0.00 0.00 0.00 3.68
259 260 7.551974 TGAAAAAGTTCAAAATGGATCAAGCAA 59.448 29.630 0.00 0.00 40.87 3.91
260 261 7.046652 TGAAAAAGTTCAAAATGGATCAAGCA 58.953 30.769 0.00 0.00 40.87 3.91
261 262 7.481275 TGAAAAAGTTCAAAATGGATCAAGC 57.519 32.000 0.00 0.00 40.87 4.01
274 275 9.936759 ACCTTGATAAAGTTTTGAAAAAGTTCA 57.063 25.926 8.61 1.89 39.82 3.18
287 288 9.010029 CCACAAAGTACATACCTTGATAAAGTT 57.990 33.333 7.27 0.00 33.14 2.66
288 289 8.380099 TCCACAAAGTACATACCTTGATAAAGT 58.620 33.333 7.27 0.00 33.14 2.66
289 290 8.786826 TCCACAAAGTACATACCTTGATAAAG 57.213 34.615 7.27 0.00 33.14 1.85
290 291 9.226606 CTTCCACAAAGTACATACCTTGATAAA 57.773 33.333 7.27 0.00 33.14 1.40
291 292 8.380099 ACTTCCACAAAGTACATACCTTGATAA 58.620 33.333 7.27 0.00 46.55 1.75
292 293 7.913789 ACTTCCACAAAGTACATACCTTGATA 58.086 34.615 7.27 0.00 46.55 2.15
293 294 6.779860 ACTTCCACAAAGTACATACCTTGAT 58.220 36.000 7.27 0.00 46.55 2.57
294 295 6.182507 ACTTCCACAAAGTACATACCTTGA 57.817 37.500 7.27 0.00 46.55 3.02
311 312 3.695830 AGACGCTTAATTGGACTTCCA 57.304 42.857 0.00 0.00 45.94 3.53
312 313 4.000988 TCAAGACGCTTAATTGGACTTCC 58.999 43.478 0.00 0.00 0.00 3.46
313 314 5.582665 AGATCAAGACGCTTAATTGGACTTC 59.417 40.000 0.00 0.00 0.00 3.01
314 315 5.491982 AGATCAAGACGCTTAATTGGACTT 58.508 37.500 0.00 0.00 0.00 3.01
315 316 5.091261 AGATCAAGACGCTTAATTGGACT 57.909 39.130 0.00 0.00 0.00 3.85
316 317 6.926272 AGATAGATCAAGACGCTTAATTGGAC 59.074 38.462 0.00 0.00 0.00 4.02
317 318 7.014711 AGAGATAGATCAAGACGCTTAATTGGA 59.985 37.037 0.00 0.00 0.00 3.53
318 319 7.151308 AGAGATAGATCAAGACGCTTAATTGG 58.849 38.462 0.00 0.00 0.00 3.16
319 320 9.853555 ATAGAGATAGATCAAGACGCTTAATTG 57.146 33.333 0.00 0.00 0.00 2.32
322 323 9.945904 TCTATAGAGATAGATCAAGACGCTTAA 57.054 33.333 0.00 0.00 39.34 1.85
335 336 7.646884 TGGGCATCAAGATCTATAGAGATAGA 58.353 38.462 8.70 4.65 46.42 1.98
336 337 7.894753 TGGGCATCAAGATCTATAGAGATAG 57.105 40.000 8.70 0.00 42.80 2.08
337 338 8.851106 ATTGGGCATCAAGATCTATAGAGATA 57.149 34.615 8.70 0.00 38.52 1.98
338 339 7.752518 ATTGGGCATCAAGATCTATAGAGAT 57.247 36.000 8.70 0.00 40.04 2.75
339 340 8.851106 ATATTGGGCATCAAGATCTATAGAGA 57.149 34.615 8.70 0.27 38.95 3.10
344 345 9.790344 GCTTATATATTGGGCATCAAGATCTAT 57.210 33.333 0.00 0.00 38.20 1.98
345 346 8.771286 TGCTTATATATTGGGCATCAAGATCTA 58.229 33.333 0.00 0.00 38.20 1.98
346 347 7.636579 TGCTTATATATTGGGCATCAAGATCT 58.363 34.615 3.05 0.00 38.20 2.75
347 348 7.468357 GCTGCTTATATATTGGGCATCAAGATC 60.468 40.741 3.05 0.00 38.20 2.75
348 349 6.320672 GCTGCTTATATATTGGGCATCAAGAT 59.679 38.462 0.00 4.90 40.11 2.40
349 350 5.649395 GCTGCTTATATATTGGGCATCAAGA 59.351 40.000 0.00 0.00 38.95 3.02
350 351 5.651139 AGCTGCTTATATATTGGGCATCAAG 59.349 40.000 0.00 0.00 38.95 3.02
351 352 5.573219 AGCTGCTTATATATTGGGCATCAA 58.427 37.500 0.00 0.00 40.01 2.57
352 353 5.183530 AGCTGCTTATATATTGGGCATCA 57.816 39.130 0.00 0.00 32.39 3.07
353 354 5.649395 TGAAGCTGCTTATATATTGGGCATC 59.351 40.000 15.95 0.00 32.39 3.91
354 355 5.416952 GTGAAGCTGCTTATATATTGGGCAT 59.583 40.000 15.95 0.00 32.39 4.40
355 356 4.761739 GTGAAGCTGCTTATATATTGGGCA 59.238 41.667 15.95 1.92 0.00 5.36
356 357 5.006386 AGTGAAGCTGCTTATATATTGGGC 58.994 41.667 15.95 0.00 0.00 5.36
357 358 6.233434 TCAGTGAAGCTGCTTATATATTGGG 58.767 40.000 15.95 0.00 44.66 4.12
358 359 6.370994 CCTCAGTGAAGCTGCTTATATATTGG 59.629 42.308 15.95 8.76 44.66 3.16
359 360 6.933521 ACCTCAGTGAAGCTGCTTATATATTG 59.066 38.462 15.95 9.20 44.66 1.90
360 361 7.016072 AGACCTCAGTGAAGCTGCTTATATATT 59.984 37.037 15.95 0.00 44.66 1.28
361 362 6.496565 AGACCTCAGTGAAGCTGCTTATATAT 59.503 38.462 15.95 0.00 44.66 0.86
362 363 5.835819 AGACCTCAGTGAAGCTGCTTATATA 59.164 40.000 15.95 0.00 44.66 0.86
363 364 4.653341 AGACCTCAGTGAAGCTGCTTATAT 59.347 41.667 15.95 0.72 44.66 0.86
364 365 4.026744 AGACCTCAGTGAAGCTGCTTATA 58.973 43.478 15.95 4.77 44.66 0.98
365 366 2.836981 AGACCTCAGTGAAGCTGCTTAT 59.163 45.455 15.95 1.50 44.66 1.73
366 367 2.251818 AGACCTCAGTGAAGCTGCTTA 58.748 47.619 15.95 0.00 44.66 3.09
367 368 1.055040 AGACCTCAGTGAAGCTGCTT 58.945 50.000 15.92 15.92 44.66 3.91
368 369 1.055040 AAGACCTCAGTGAAGCTGCT 58.945 50.000 0.00 0.00 44.66 4.24
369 370 1.803555 GAAAGACCTCAGTGAAGCTGC 59.196 52.381 0.00 0.00 44.66 5.25
370 371 3.117491 TGAAAGACCTCAGTGAAGCTG 57.883 47.619 0.00 0.00 46.34 4.24
371 372 4.070716 CAATGAAAGACCTCAGTGAAGCT 58.929 43.478 0.00 0.00 42.58 3.74
372 373 4.067896 TCAATGAAAGACCTCAGTGAAGC 58.932 43.478 1.59 0.00 44.81 3.86
375 376 6.603201 AGTTTTTCAATGAAAGACCTCAGTGA 59.397 34.615 21.01 0.00 45.76 3.41
376 377 6.799512 AGTTTTTCAATGAAAGACCTCAGTG 58.200 36.000 21.01 0.00 41.60 3.66
377 378 7.410120 AAGTTTTTCAATGAAAGACCTCAGT 57.590 32.000 21.01 4.53 37.35 3.41
378 379 8.707938 AAAAGTTTTTCAATGAAAGACCTCAG 57.292 30.769 21.01 0.00 37.35 3.35
410 411 8.457238 AATTTCTGGAGAGCATAAAAGGATAC 57.543 34.615 0.00 0.00 0.00 2.24
411 412 8.497745 AGAATTTCTGGAGAGCATAAAAGGATA 58.502 33.333 0.00 0.00 0.00 2.59
412 413 7.352738 AGAATTTCTGGAGAGCATAAAAGGAT 58.647 34.615 0.00 0.00 0.00 3.24
413 414 6.725364 AGAATTTCTGGAGAGCATAAAAGGA 58.275 36.000 0.00 0.00 0.00 3.36
414 415 8.688747 ATAGAATTTCTGGAGAGCATAAAAGG 57.311 34.615 9.22 0.00 0.00 3.11
421 422 9.857656 AAAATGATATAGAATTTCTGGAGAGCA 57.142 29.630 9.22 0.00 0.00 4.26
532 665 0.579156 GATCGAGCGGCAGAAATCAC 59.421 55.000 1.45 0.00 0.00 3.06
540 673 0.108992 AGTAAAACGATCGAGCGGCA 60.109 50.000 28.05 6.05 35.12 5.69
595 728 5.144359 GTCATGTGTGTAAAACGGATGAAC 58.856 41.667 0.00 0.00 33.24 3.18
640 773 2.555227 CCCATAGACAAACAAGCCCACT 60.555 50.000 0.00 0.00 0.00 4.00
1268 1726 9.177608 CTACCTTTTGAGAATGACCATAATTCA 57.822 33.333 0.00 0.00 36.65 2.57
1567 2031 1.715785 TGGTGTCTCATGTCCTGTCA 58.284 50.000 0.00 0.00 0.00 3.58
1569 2033 2.544721 AGATGGTGTCTCATGTCCTGT 58.455 47.619 0.00 0.00 28.45 4.00
1629 2093 7.771544 GGGGTTCCCTTACAGTCTTTCTGTC 62.772 52.000 7.87 0.00 46.24 3.51
1631 2095 3.559384 GGGGTTCCCTTACAGTCTTTCTG 60.559 52.174 7.87 0.00 44.11 3.02
1632 2096 2.643304 GGGGTTCCCTTACAGTCTTTCT 59.357 50.000 7.87 0.00 41.34 2.52
1633 2097 3.069079 GGGGTTCCCTTACAGTCTTTC 57.931 52.381 7.87 0.00 41.34 2.62
1645 2109 6.266786 CACCAATTATAATGTAAGGGGTTCCC 59.733 42.308 0.00 0.00 45.90 3.97
1646 2110 6.239204 GCACCAATTATAATGTAAGGGGTTCC 60.239 42.308 0.00 0.00 0.00 3.62
1647 2111 6.322712 TGCACCAATTATAATGTAAGGGGTTC 59.677 38.462 0.00 0.00 0.00 3.62
1648 2112 6.198639 TGCACCAATTATAATGTAAGGGGTT 58.801 36.000 0.00 0.00 0.00 4.11
1649 2113 5.772004 TGCACCAATTATAATGTAAGGGGT 58.228 37.500 0.00 0.00 0.00 4.95
1650 2114 6.097554 TGTTGCACCAATTATAATGTAAGGGG 59.902 38.462 0.00 2.04 0.00 4.79
1651 2115 7.106439 TGTTGCACCAATTATAATGTAAGGG 57.894 36.000 0.00 0.00 0.00 3.95
1652 2116 8.868916 GTTTGTTGCACCAATTATAATGTAAGG 58.131 33.333 0.00 2.35 0.00 2.69
1653 2117 8.868916 GGTTTGTTGCACCAATTATAATGTAAG 58.131 33.333 0.00 0.00 34.04 2.34
1654 2118 7.819900 GGGTTTGTTGCACCAATTATAATGTAA 59.180 33.333 0.00 0.00 35.80 2.41
1655 2119 7.039011 TGGGTTTGTTGCACCAATTATAATGTA 60.039 33.333 0.00 0.00 35.80 2.29
1656 2120 6.169800 GGGTTTGTTGCACCAATTATAATGT 58.830 36.000 0.00 0.00 35.80 2.71
1657 2121 6.169094 TGGGTTTGTTGCACCAATTATAATG 58.831 36.000 0.00 0.00 35.80 1.90
1658 2122 6.365970 TGGGTTTGTTGCACCAATTATAAT 57.634 33.333 0.00 0.00 35.80 1.28
1659 2123 5.808366 TGGGTTTGTTGCACCAATTATAA 57.192 34.783 0.00 0.00 35.80 0.98
1660 2124 5.808366 TTGGGTTTGTTGCACCAATTATA 57.192 34.783 0.00 0.00 38.02 0.98
1661 2125 4.696479 TTGGGTTTGTTGCACCAATTAT 57.304 36.364 0.00 0.00 38.02 1.28
1662 2126 4.487714 TTTGGGTTTGTTGCACCAATTA 57.512 36.364 0.00 0.00 42.09 1.40
1663 2127 3.356529 TTTGGGTTTGTTGCACCAATT 57.643 38.095 0.00 0.00 42.09 2.32
1664 2128 3.574354 ATTTGGGTTTGTTGCACCAAT 57.426 38.095 0.00 0.00 42.09 3.16
1665 2129 3.012518 CAATTTGGGTTTGTTGCACCAA 58.987 40.909 0.00 0.00 40.94 3.67
1666 2130 2.636830 CAATTTGGGTTTGTTGCACCA 58.363 42.857 0.00 0.00 35.80 4.17
1667 2131 1.333308 GCAATTTGGGTTTGTTGCACC 59.667 47.619 4.26 0.00 44.63 5.01
1668 2132 2.753989 GCAATTTGGGTTTGTTGCAC 57.246 45.000 4.26 0.00 44.63 4.57
1670 2134 2.682352 ACTTGCAATTTGGGTTTGTTGC 59.318 40.909 0.00 2.25 45.27 4.17
1671 2135 4.272261 GGTACTTGCAATTTGGGTTTGTTG 59.728 41.667 0.00 0.00 0.00 3.33
1672 2136 4.080863 TGGTACTTGCAATTTGGGTTTGTT 60.081 37.500 0.00 0.00 0.00 2.83
1673 2137 3.452627 TGGTACTTGCAATTTGGGTTTGT 59.547 39.130 0.00 0.00 0.00 2.83
1674 2138 4.065321 TGGTACTTGCAATTTGGGTTTG 57.935 40.909 0.00 0.00 0.00 2.93
1675 2139 4.640364 CATGGTACTTGCAATTTGGGTTT 58.360 39.130 0.00 0.00 0.00 3.27
1676 2140 3.556843 GCATGGTACTTGCAATTTGGGTT 60.557 43.478 14.01 0.00 39.90 4.11
1677 2141 2.028203 GCATGGTACTTGCAATTTGGGT 60.028 45.455 14.01 0.00 39.90 4.51
1678 2142 2.620242 GCATGGTACTTGCAATTTGGG 58.380 47.619 14.01 0.00 39.90 4.12
1679 2143 2.234414 AGGCATGGTACTTGCAATTTGG 59.766 45.455 18.60 0.00 41.95 3.28
1680 2144 3.598019 AGGCATGGTACTTGCAATTTG 57.402 42.857 18.60 0.00 41.95 2.32
1681 2145 3.577848 TCAAGGCATGGTACTTGCAATTT 59.422 39.130 18.60 9.78 42.82 1.82
1682 2146 3.164268 TCAAGGCATGGTACTTGCAATT 58.836 40.909 18.60 0.00 42.82 2.32
1683 2147 2.806434 TCAAGGCATGGTACTTGCAAT 58.194 42.857 18.60 7.66 42.82 3.56
1684 2148 2.284754 TCAAGGCATGGTACTTGCAA 57.715 45.000 18.60 0.00 42.82 4.08
1685 2149 1.885887 GTTCAAGGCATGGTACTTGCA 59.114 47.619 18.60 0.00 42.82 4.08
1686 2150 1.202348 GGTTCAAGGCATGGTACTTGC 59.798 52.381 11.43 11.43 42.82 4.01
1687 2151 2.489329 CAGGTTCAAGGCATGGTACTTG 59.511 50.000 0.00 0.00 44.09 3.16
1688 2152 2.555227 CCAGGTTCAAGGCATGGTACTT 60.555 50.000 0.00 0.00 33.58 2.24
1689 2153 1.004745 CCAGGTTCAAGGCATGGTACT 59.995 52.381 0.00 0.00 33.58 2.73
1690 2154 1.463674 CCAGGTTCAAGGCATGGTAC 58.536 55.000 0.00 0.00 33.58 3.34
1691 2155 0.331278 CCCAGGTTCAAGGCATGGTA 59.669 55.000 0.00 0.00 36.19 3.25
1692 2156 1.077265 CCCAGGTTCAAGGCATGGT 59.923 57.895 0.00 0.00 36.19 3.55
1693 2157 1.077265 ACCCAGGTTCAAGGCATGG 59.923 57.895 0.00 0.00 37.52 3.66
1694 2158 1.252904 CCACCCAGGTTCAAGGCATG 61.253 60.000 0.00 0.00 0.00 4.06
1695 2159 1.077265 CCACCCAGGTTCAAGGCAT 59.923 57.895 0.00 0.00 0.00 4.40
1696 2160 2.520458 CCACCCAGGTTCAAGGCA 59.480 61.111 0.00 0.00 0.00 4.75
1697 2161 2.283173 CCCACCCAGGTTCAAGGC 60.283 66.667 0.00 0.00 34.66 4.35
1698 2162 1.228552 CACCCACCCAGGTTCAAGG 60.229 63.158 0.00 0.00 38.39 3.61
1699 2163 1.228552 CCACCCACCCAGGTTCAAG 60.229 63.158 0.00 0.00 38.39 3.02
1700 2164 2.773527 CCCACCCACCCAGGTTCAA 61.774 63.158 0.00 0.00 38.39 2.69
1701 2165 3.182263 CCCACCCACCCAGGTTCA 61.182 66.667 0.00 0.00 38.39 3.18
1702 2166 2.426305 CTTCCCACCCACCCAGGTTC 62.426 65.000 0.00 0.00 38.39 3.62
1703 2167 2.370403 TTCCCACCCACCCAGGTT 60.370 61.111 0.00 0.00 38.39 3.50
1704 2168 2.858974 CTTCCCACCCACCCAGGT 60.859 66.667 0.00 0.00 42.40 4.00
1705 2169 3.661648 CCTTCCCACCCACCCAGG 61.662 72.222 0.00 0.00 37.03 4.45
1706 2170 4.366684 GCCTTCCCACCCACCCAG 62.367 72.222 0.00 0.00 0.00 4.45
1708 2172 3.662117 GATGCCTTCCCACCCACCC 62.662 68.421 0.00 0.00 0.00 4.61
1709 2173 2.043953 GATGCCTTCCCACCCACC 60.044 66.667 0.00 0.00 0.00 4.61
1710 2174 1.379044 CTGATGCCTTCCCACCCAC 60.379 63.158 0.00 0.00 0.00 4.61
1711 2175 3.089838 CTGATGCCTTCCCACCCA 58.910 61.111 0.00 0.00 0.00 4.51
1712 2176 2.440980 GCTGATGCCTTCCCACCC 60.441 66.667 0.00 0.00 0.00 4.61
1722 2186 2.440980 GTGGGAAGGGGCTGATGC 60.441 66.667 0.00 0.00 38.76 3.91
1723 2187 2.276740 GGTGGGAAGGGGCTGATG 59.723 66.667 0.00 0.00 0.00 3.07
1724 2188 2.204291 TGGTGGGAAGGGGCTGAT 60.204 61.111 0.00 0.00 0.00 2.90
1725 2189 2.409984 TAGTGGTGGGAAGGGGCTGA 62.410 60.000 0.00 0.00 0.00 4.26
1726 2190 1.915078 CTAGTGGTGGGAAGGGGCTG 61.915 65.000 0.00 0.00 0.00 4.85
1727 2191 1.616628 CTAGTGGTGGGAAGGGGCT 60.617 63.158 0.00 0.00 0.00 5.19
1728 2192 2.680370 CCTAGTGGTGGGAAGGGGC 61.680 68.421 0.00 0.00 0.00 5.80
1729 2193 2.680370 GCCTAGTGGTGGGAAGGGG 61.680 68.421 0.00 0.00 35.27 4.79
1730 2194 0.326238 TAGCCTAGTGGTGGGAAGGG 60.326 60.000 0.00 0.00 35.27 3.95
1731 2195 1.417890 CATAGCCTAGTGGTGGGAAGG 59.582 57.143 0.00 0.00 35.27 3.46
1732 2196 1.202698 GCATAGCCTAGTGGTGGGAAG 60.203 57.143 0.00 0.00 35.27 3.46
1733 2197 0.837272 GCATAGCCTAGTGGTGGGAA 59.163 55.000 0.00 0.00 35.27 3.97
1734 2198 1.054406 GGCATAGCCTAGTGGTGGGA 61.054 60.000 0.00 0.00 46.69 4.37
1735 2199 1.451936 GGCATAGCCTAGTGGTGGG 59.548 63.158 0.00 0.00 46.69 4.61
1746 2210 1.691434 AGAGGCAGACTAAGGCATAGC 59.309 52.381 0.00 0.00 34.78 2.97
1747 2211 2.697751 ACAGAGGCAGACTAAGGCATAG 59.302 50.000 0.00 0.00 37.66 2.23
1748 2212 2.752030 ACAGAGGCAGACTAAGGCATA 58.248 47.619 0.00 0.00 0.00 3.14
1749 2213 1.577736 ACAGAGGCAGACTAAGGCAT 58.422 50.000 0.00 0.00 0.00 4.40
1750 2214 2.231716 TACAGAGGCAGACTAAGGCA 57.768 50.000 0.00 0.00 0.00 4.75
1751 2215 3.828875 AATACAGAGGCAGACTAAGGC 57.171 47.619 0.00 0.00 0.00 4.35
1781 2245 9.962783 CTACGTAAAGAGTAGGCAAATACTAAT 57.037 33.333 0.00 0.00 38.25 1.73
1909 2393 7.734924 TGCAAGAATATAATAAGGACAGCAG 57.265 36.000 0.00 0.00 0.00 4.24
1985 2469 4.811908 TCATCACCAAATGCAAACATGAG 58.188 39.130 0.00 0.00 36.36 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.