Multiple sequence alignment - TraesCS5B01G221700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G221700 chr5B 100.000 5967 0 0 1 5967 396159372 396165338 0.000000e+00 11020.0
1 TraesCS5B01G221700 chr5B 96.606 825 27 1 1 825 617660882 617661705 0.000000e+00 1367.0
2 TraesCS5B01G221700 chr5B 91.736 847 45 12 1 825 357130043 357130886 0.000000e+00 1153.0
3 TraesCS5B01G221700 chr5B 94.382 267 15 0 559 825 637390371 637390105 1.550000e-110 411.0
4 TraesCS5B01G221700 chr5B 99.371 159 1 0 1955 2113 692474316 692474474 7.570000e-74 289.0
5 TraesCS5B01G221700 chr5B 98.734 158 2 0 1955 2112 710341682 710341525 1.270000e-71 281.0
6 TraesCS5B01G221700 chr5D 92.125 3492 146 51 2543 5967 337527063 337530492 0.000000e+00 4806.0
7 TraesCS5B01G221700 chr5D 89.234 1096 50 32 876 1954 337525196 337526240 0.000000e+00 1308.0
8 TraesCS5B01G221700 chr5D 91.160 181 6 7 2111 2281 337526299 337526479 2.780000e-58 237.0
9 TraesCS5B01G221700 chr5D 100.000 39 0 0 2415 2453 337526967 337527005 8.300000e-09 73.1
10 TraesCS5B01G221700 chr5A 91.012 2036 71 34 3221 5190 438788866 438790855 0.000000e+00 2643.0
11 TraesCS5B01G221700 chr5A 86.387 1168 81 28 821 1929 438786713 438787861 0.000000e+00 1205.0
12 TraesCS5B01G221700 chr5A 85.626 487 31 18 2525 2993 438788280 438788745 5.410000e-130 475.0
13 TraesCS5B01G221700 chr5A 90.685 365 16 12 2111 2462 438787908 438788267 2.520000e-128 470.0
14 TraesCS5B01G221700 chr5A 85.795 176 9 10 5273 5432 438790974 438791149 7.950000e-39 172.0
15 TraesCS5B01G221700 chr5A 89.167 120 11 1 1955 2072 126623488 126623607 1.340000e-31 148.0
16 TraesCS5B01G221700 chr5A 91.346 104 7 1 3089 3190 438788763 438788866 2.240000e-29 141.0
17 TraesCS5B01G221700 chr2A 95.301 830 29 5 5 825 735571208 735570380 0.000000e+00 1308.0
18 TraesCS5B01G221700 chr2A 79.646 113 21 2 1209 1320 16617361 16617250 4.960000e-11 80.5
19 TraesCS5B01G221700 chr2A 78.761 113 22 2 1209 1320 16630310 16630199 2.310000e-09 75.0
20 TraesCS5B01G221700 chr4A 94.850 835 32 6 1 825 587308185 587309018 0.000000e+00 1293.0
21 TraesCS5B01G221700 chr7B 92.943 836 45 10 1 825 49088101 49088933 0.000000e+00 1205.0
22 TraesCS5B01G221700 chr7B 82.747 881 137 13 4097 4968 715999141 716000015 0.000000e+00 771.0
23 TraesCS5B01G221700 chr7B 79.333 450 63 19 1000 1440 715996608 715997036 7.570000e-74 289.0
24 TraesCS5B01G221700 chr7B 88.889 63 5 2 5461 5522 458224163 458224224 6.410000e-10 76.8
25 TraesCS5B01G221700 chr7B 88.462 52 5 1 5500 5550 742183202 742183151 1.800000e-05 62.1
26 TraesCS5B01G221700 chr7A 91.943 844 43 12 4 825 343949506 343948666 0.000000e+00 1158.0
27 TraesCS5B01G221700 chr7A 92.671 805 29 9 1 794 191270681 191269896 0.000000e+00 1133.0
28 TraesCS5B01G221700 chr7A 83.389 891 134 14 4087 4968 714673665 714672780 0.000000e+00 813.0
29 TraesCS5B01G221700 chr7A 80.531 452 63 18 1000 1440 714677913 714677476 2.070000e-84 324.0
30 TraesCS5B01G221700 chr7A 79.832 119 16 6 5402 5520 492069969 492070079 4.960000e-11 80.5
31 TraesCS5B01G221700 chr7D 83.893 894 124 20 4087 4968 620251682 620252567 0.000000e+00 835.0
32 TraesCS5B01G221700 chr7D 79.204 452 72 17 1000 1440 620248524 620248964 1.630000e-75 294.0
33 TraesCS5B01G221700 chr7D 82.609 299 47 4 5558 5852 29555429 29555132 5.930000e-65 259.0
34 TraesCS5B01G221700 chr4D 87.207 555 48 15 1 548 490983823 490984361 1.420000e-170 610.0
35 TraesCS5B01G221700 chr1D 86.380 558 54 15 1 551 256253728 256253186 1.850000e-164 590.0
36 TraesCS5B01G221700 chr1B 95.911 269 11 0 559 827 651521567 651521299 2.550000e-118 436.0
37 TraesCS5B01G221700 chr1B 85.106 94 12 2 5464 5556 655855419 655855327 1.770000e-15 95.3
38 TraesCS5B01G221700 chr2B 96.861 223 7 0 603 825 134424698 134424920 2.030000e-99 374.0
39 TraesCS5B01G221700 chr2B 96.364 55 0 2 2060 2113 164656701 164656754 8.240000e-14 89.8
40 TraesCS5B01G221700 chr2B 94.340 53 3 0 2060 2112 532509690 532509638 1.380000e-11 82.4
41 TraesCS5B01G221700 chr2B 90.000 60 5 1 2060 2118 734390062 734390003 6.410000e-10 76.8
42 TraesCS5B01G221700 chr1A 96.447 197 7 0 4515 4711 26844272 26844468 5.770000e-85 326.0
43 TraesCS5B01G221700 chr1A 94.444 54 3 0 2060 2113 149353954 149353901 3.830000e-12 84.2
44 TraesCS5B01G221700 chr6A 95.939 197 8 0 4515 4711 610327824 610328020 2.680000e-83 320.0
45 TraesCS5B01G221700 chr6A 85.714 70 9 1 4773 4841 439295612 439295543 8.300000e-09 73.1
46 TraesCS5B01G221700 chr3D 95.939 197 8 0 4515 4711 18639030 18638834 2.680000e-83 320.0
47 TraesCS5B01G221700 chr3D 92.453 53 4 0 2060 2112 594856186 594856238 6.410000e-10 76.8
48 TraesCS5B01G221700 chr2D 95.939 197 8 0 4515 4711 133790547 133790743 2.680000e-83 320.0
49 TraesCS5B01G221700 chr2D 78.846 104 20 2 1209 1311 14373555 14373657 1.070000e-07 69.4
50 TraesCS5B01G221700 chr3B 94.340 53 3 0 2060 2112 534152233 534152181 1.380000e-11 82.4
51 TraesCS5B01G221700 chr6B 92.593 54 4 0 2060 2113 678804298 678804351 1.780000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G221700 chr5B 396159372 396165338 5966 False 11020.000 11020 100.000000 1 5967 1 chr5B.!!$F2 5966
1 TraesCS5B01G221700 chr5B 617660882 617661705 823 False 1367.000 1367 96.606000 1 825 1 chr5B.!!$F3 824
2 TraesCS5B01G221700 chr5B 357130043 357130886 843 False 1153.000 1153 91.736000 1 825 1 chr5B.!!$F1 824
3 TraesCS5B01G221700 chr5D 337525196 337530492 5296 False 1606.025 4806 93.129750 876 5967 4 chr5D.!!$F1 5091
4 TraesCS5B01G221700 chr5A 438786713 438791149 4436 False 851.000 2643 88.475167 821 5432 6 chr5A.!!$F2 4611
5 TraesCS5B01G221700 chr2A 735570380 735571208 828 True 1308.000 1308 95.301000 5 825 1 chr2A.!!$R3 820
6 TraesCS5B01G221700 chr4A 587308185 587309018 833 False 1293.000 1293 94.850000 1 825 1 chr4A.!!$F1 824
7 TraesCS5B01G221700 chr7B 49088101 49088933 832 False 1205.000 1205 92.943000 1 825 1 chr7B.!!$F1 824
8 TraesCS5B01G221700 chr7B 715996608 716000015 3407 False 530.000 771 81.040000 1000 4968 2 chr7B.!!$F3 3968
9 TraesCS5B01G221700 chr7A 343948666 343949506 840 True 1158.000 1158 91.943000 4 825 1 chr7A.!!$R2 821
10 TraesCS5B01G221700 chr7A 191269896 191270681 785 True 1133.000 1133 92.671000 1 794 1 chr7A.!!$R1 793
11 TraesCS5B01G221700 chr7A 714672780 714677913 5133 True 568.500 813 81.960000 1000 4968 2 chr7A.!!$R3 3968
12 TraesCS5B01G221700 chr7D 620248524 620252567 4043 False 564.500 835 81.548500 1000 4968 2 chr7D.!!$F1 3968
13 TraesCS5B01G221700 chr4D 490983823 490984361 538 False 610.000 610 87.207000 1 548 1 chr4D.!!$F1 547
14 TraesCS5B01G221700 chr1D 256253186 256253728 542 True 590.000 590 86.380000 1 551 1 chr1D.!!$R1 550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
846 883 0.522915 GACTCTAAACGACGAGCCCG 60.523 60.0 0.00 0.0 42.50 6.13 F
1967 2977 0.031585 CTGCTGTGCATGCAACAACT 59.968 50.0 24.58 0.0 40.13 3.16 F
2343 3363 0.033796 CAGTGCCACAGGGGATGATT 60.034 55.0 0.00 0.0 40.01 2.57 F
2497 3898 0.040958 GAAGGTGCTGCTGTTTGTCG 60.041 55.0 0.00 0.0 0.00 4.35 F
2572 3973 0.093026 CACGATCGAACGCAACCTTC 59.907 55.0 24.34 0.0 36.70 3.46 F
3842 5316 0.108424 AGAGTAGTAGTCGCCGTCGT 60.108 55.0 0.00 0.0 36.96 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2071 3081 0.037160 TTAGGCCCCTCGACCAAAAC 59.963 55.000 0.00 0.0 0.00 2.43 R
3670 5129 0.109272 CGGAGCTTCGTTGCAGAGTA 60.109 55.000 6.14 0.0 34.99 2.59 R
4092 7873 0.868406 GAGGAACGTCACCTGCAAAG 59.132 55.000 17.05 0.0 37.93 2.77 R
4290 8794 3.691342 CCGGGTGCTCGAAGGTGA 61.691 66.667 0.00 0.0 0.00 4.02 R
4703 9207 1.954362 CTGCCCTTCTCCGACTCCAG 61.954 65.000 0.00 0.0 0.00 3.86 R
5721 10310 0.250901 AGTGCCATGTGGACCTGAAC 60.251 55.000 2.55 0.0 37.39 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
325 334 7.966246 TTTTCATCTCCAATGGATTTGTTTG 57.034 32.000 0.87 0.00 33.15 2.93
329 338 2.997986 CTCCAATGGATTTGTTTGCTGC 59.002 45.455 0.87 0.00 33.15 5.25
531 543 4.451629 TCCGTCTGTCATAAAACTCTCC 57.548 45.455 0.00 0.00 0.00 3.71
562 596 2.099921 CACCGACCCATTGTTGTCAAAA 59.900 45.455 0.00 0.00 37.11 2.44
623 660 2.170166 GCAATTCATGTTGGGGTCTGA 58.830 47.619 0.00 0.00 0.00 3.27
636 673 1.354368 GGGTCTGAACAAGGGAATGGA 59.646 52.381 0.00 0.00 0.00 3.41
707 744 2.904664 GCAAAGGCAGGCTTGTTTC 58.095 52.632 10.56 0.00 40.72 2.78
717 754 4.278419 GGCAGGCTTGTTTCTCTTTTCTTA 59.722 41.667 0.00 0.00 0.00 2.10
831 868 4.109050 GTGCATGCTTACTAGTCAGACTC 58.891 47.826 20.33 0.00 0.00 3.36
837 874 6.179504 TGCTTACTAGTCAGACTCTAAACG 57.820 41.667 6.27 0.00 0.00 3.60
839 876 6.128336 TGCTTACTAGTCAGACTCTAAACGAC 60.128 42.308 6.27 0.00 0.00 4.34
844 881 1.467734 TCAGACTCTAAACGACGAGCC 59.532 52.381 0.00 0.00 0.00 4.70
845 882 0.810016 AGACTCTAAACGACGAGCCC 59.190 55.000 0.00 0.00 0.00 5.19
846 883 0.522915 GACTCTAAACGACGAGCCCG 60.523 60.000 0.00 0.00 42.50 6.13
864 901 0.788391 CGCCGGTAAAATATCCTCGC 59.212 55.000 1.90 0.00 0.00 5.03
867 904 2.607771 GCCGGTAAAATATCCTCGCGTA 60.608 50.000 5.77 0.00 0.00 4.42
876 913 1.445716 ATCCTCGCGTACTTCCCTCG 61.446 60.000 5.77 0.00 0.00 4.63
877 914 2.408022 CTCGCGTACTTCCCTCGG 59.592 66.667 5.77 0.00 0.00 4.63
959 1014 2.014554 CAGCGCACAAGCAAGCAAG 61.015 57.895 11.47 0.00 42.27 4.01
960 1015 3.400590 GCGCACAAGCAAGCAAGC 61.401 61.111 0.30 0.00 42.27 4.01
962 1017 2.332514 GCACAAGCAAGCAAGCGA 59.667 55.556 0.00 0.00 41.58 4.93
964 1019 0.871163 GCACAAGCAAGCAAGCGAAA 60.871 50.000 0.00 0.00 41.58 3.46
965 1020 1.126079 CACAAGCAAGCAAGCGAAAG 58.874 50.000 0.00 0.00 40.15 2.62
967 1022 0.665369 CAAGCAAGCAAGCGAAAGGG 60.665 55.000 0.00 0.00 40.15 3.95
968 1023 0.823356 AAGCAAGCAAGCGAAAGGGA 60.823 50.000 0.00 0.00 40.15 4.20
969 1024 1.081175 GCAAGCAAGCGAAAGGGAC 60.081 57.895 0.00 0.00 0.00 4.46
970 1025 1.581447 CAAGCAAGCGAAAGGGACC 59.419 57.895 0.00 0.00 0.00 4.46
971 1026 1.966451 AAGCAAGCGAAAGGGACCG 60.966 57.895 0.00 0.00 0.00 4.79
972 1027 3.431725 GCAAGCGAAAGGGACCGG 61.432 66.667 0.00 0.00 0.00 5.28
973 1028 2.746277 CAAGCGAAAGGGACCGGG 60.746 66.667 6.32 0.00 0.00 5.73
974 1029 4.717313 AAGCGAAAGGGACCGGGC 62.717 66.667 6.32 0.21 0.00 6.13
977 1032 4.016706 CGAAAGGGACCGGGCAGT 62.017 66.667 11.00 0.00 0.00 4.40
978 1033 2.046217 GAAAGGGACCGGGCAGTC 60.046 66.667 11.00 0.00 35.95 3.51
979 1034 2.852075 AAAGGGACCGGGCAGTCA 60.852 61.111 11.00 0.00 38.59 3.41
980 1035 2.804828 GAAAGGGACCGGGCAGTCAG 62.805 65.000 11.00 0.00 38.59 3.51
1165 1229 4.856607 GCGACGGCGAGAAGGAGG 62.857 72.222 18.90 0.00 40.82 4.30
1166 1230 3.132139 CGACGGCGAGAAGGAGGA 61.132 66.667 16.62 0.00 40.82 3.71
1167 1231 2.802106 GACGGCGAGAAGGAGGAG 59.198 66.667 16.62 0.00 0.00 3.69
1168 1232 2.756283 ACGGCGAGAAGGAGGAGG 60.756 66.667 16.62 0.00 0.00 4.30
1169 1233 3.532155 CGGCGAGAAGGAGGAGGG 61.532 72.222 0.00 0.00 0.00 4.30
1505 1605 3.920093 GAAACCCGGGGAGGTGCTG 62.920 68.421 27.92 0.00 40.05 4.41
1595 2485 3.269178 GACAGTGAGGCGTAGTACTAGT 58.731 50.000 1.87 0.00 0.00 2.57
1600 2490 4.080638 AGTGAGGCGTAGTACTAGTTACCT 60.081 45.833 1.87 7.66 0.00 3.08
1626 2516 2.025418 GTGCGACACAGTTACCGGG 61.025 63.158 6.32 0.00 34.08 5.73
1643 2533 2.623535 CGGGTGTTGGATCGAAACATA 58.376 47.619 13.74 0.00 39.57 2.29
1646 2536 4.260620 CGGGTGTTGGATCGAAACATAATC 60.261 45.833 13.74 3.78 39.57 1.75
1655 2629 8.792830 TGGATCGAAACATAATCTTCTTCTTT 57.207 30.769 0.00 0.00 0.00 2.52
1668 2642 5.780984 TCTTCTTCTTTCGAGGACCTAAAC 58.219 41.667 0.00 0.00 0.00 2.01
1672 2646 6.164176 TCTTCTTTCGAGGACCTAAACATTC 58.836 40.000 0.00 0.00 0.00 2.67
1682 2656 8.947115 CGAGGACCTAAACATTCTTTTTATCTT 58.053 33.333 0.00 0.00 0.00 2.40
1703 2677 8.874744 ATCTTCGAGGTTTAAGAAATACTAGC 57.125 34.615 0.00 0.00 35.47 3.42
1808 2813 1.512926 CTTTCTTGGACGGACTGGTG 58.487 55.000 0.00 0.00 0.00 4.17
1846 2851 3.972133 TCCTTGGACATCTTTGCATGAT 58.028 40.909 0.00 0.00 0.00 2.45
1873 2883 6.245724 GCGTGTGCGTTCTATTTATTTACTT 58.754 36.000 0.00 0.00 40.81 2.24
1874 2884 7.393327 GCGTGTGCGTTCTATTTATTTACTTA 58.607 34.615 0.00 0.00 40.81 2.24
1875 2885 8.060090 GCGTGTGCGTTCTATTTATTTACTTAT 58.940 33.333 0.00 0.00 40.81 1.73
1954 2964 2.350522 CGGTATTTCTGCTTCTGCTGT 58.649 47.619 0.00 0.00 40.48 4.40
1955 2965 2.094894 CGGTATTTCTGCTTCTGCTGTG 59.905 50.000 0.00 0.00 40.48 3.66
1956 2966 2.159462 GGTATTTCTGCTTCTGCTGTGC 60.159 50.000 4.92 4.92 40.48 4.57
1957 2967 1.612676 ATTTCTGCTTCTGCTGTGCA 58.387 45.000 11.64 11.64 40.48 4.57
1959 2969 0.879090 TTCTGCTTCTGCTGTGCATG 59.121 50.000 12.30 0.00 38.13 4.06
1960 2970 1.154016 CTGCTTCTGCTGTGCATGC 60.154 57.895 11.82 11.82 38.13 4.06
1961 2971 1.862602 CTGCTTCTGCTGTGCATGCA 61.863 55.000 18.46 18.46 38.13 3.96
1963 2973 1.007336 GCTTCTGCTGTGCATGCAAC 61.007 55.000 24.58 16.87 40.13 4.17
1964 2974 0.312729 CTTCTGCTGTGCATGCAACA 59.687 50.000 24.58 20.42 40.13 3.33
1965 2975 0.745468 TTCTGCTGTGCATGCAACAA 59.255 45.000 24.58 10.41 40.13 2.83
1967 2977 0.031585 CTGCTGTGCATGCAACAACT 59.968 50.000 24.58 0.00 40.13 3.16
1969 2979 0.942410 GCTGTGCATGCAACAACTGG 60.942 55.000 24.58 11.48 0.00 4.00
1972 2982 1.833492 TGCATGCAACAACTGGGCT 60.833 52.632 20.30 0.00 0.00 5.19
1974 2984 1.530013 GCATGCAACAACTGGGCTCT 61.530 55.000 14.21 0.00 0.00 4.09
1975 2985 0.524862 CATGCAACAACTGGGCTCTC 59.475 55.000 0.00 0.00 0.00 3.20
1976 2986 0.957395 ATGCAACAACTGGGCTCTCG 60.957 55.000 0.00 0.00 0.00 4.04
1977 2987 1.598130 GCAACAACTGGGCTCTCGT 60.598 57.895 0.00 0.00 0.00 4.18
1979 2989 1.714794 CAACAACTGGGCTCTCGTAG 58.285 55.000 0.00 0.00 0.00 3.51
1980 2990 1.272490 CAACAACTGGGCTCTCGTAGA 59.728 52.381 0.00 0.00 0.00 2.59
1991 3001 4.273811 TCGTAGAGAGTCACGCGT 57.726 55.556 5.58 5.58 38.05 6.01
1992 3002 1.785951 TCGTAGAGAGTCACGCGTG 59.214 57.895 32.76 32.76 38.05 5.34
1993 3003 1.863880 CGTAGAGAGTCACGCGTGC 60.864 63.158 33.63 26.51 0.00 5.34
1994 3004 1.502640 GTAGAGAGTCACGCGTGCT 59.497 57.895 33.63 30.37 0.00 4.40
1995 3005 0.725686 GTAGAGAGTCACGCGTGCTA 59.274 55.000 33.63 23.90 0.00 3.49
1996 3006 1.129998 GTAGAGAGTCACGCGTGCTAA 59.870 52.381 33.63 15.06 0.00 3.09
1999 3009 1.444553 GAGTCACGCGTGCTAAGCT 60.445 57.895 33.63 23.07 0.00 3.74
2000 3010 1.678269 GAGTCACGCGTGCTAAGCTG 61.678 60.000 33.63 8.67 0.00 4.24
2001 3011 2.432456 TCACGCGTGCTAAGCTGG 60.432 61.111 33.63 7.79 0.00 4.85
2002 3012 4.152625 CACGCGTGCTAAGCTGGC 62.153 66.667 28.16 5.14 0.00 4.85
2006 3016 3.188786 CGTGCTAAGCTGGCCGAC 61.189 66.667 0.00 0.00 0.00 4.79
2007 3017 3.188786 GTGCTAAGCTGGCCGACG 61.189 66.667 0.00 0.00 0.00 5.12
2011 3021 4.492160 TAAGCTGGCCGACGCTCG 62.492 66.667 13.50 1.17 40.07 5.03
2020 3030 3.036084 CGACGCTCGTTGGCAGTT 61.036 61.111 1.86 0.00 34.72 3.16
2021 3031 2.551270 GACGCTCGTTGGCAGTTG 59.449 61.111 0.00 0.00 0.00 3.16
2022 3032 3.579626 GACGCTCGTTGGCAGTTGC 62.580 63.158 0.00 0.00 41.14 4.17
2023 3033 3.648982 CGCTCGTTGGCAGTTGCA 61.649 61.111 6.43 0.00 44.36 4.08
2024 3034 2.050985 GCTCGTTGGCAGTTGCAC 60.051 61.111 6.43 0.00 44.36 4.57
2025 3035 2.546494 GCTCGTTGGCAGTTGCACT 61.546 57.895 6.43 0.00 44.36 4.40
2026 3036 1.571460 CTCGTTGGCAGTTGCACTC 59.429 57.895 6.43 0.00 44.36 3.51
2027 3037 1.845809 CTCGTTGGCAGTTGCACTCC 61.846 60.000 6.43 0.00 44.36 3.85
2028 3038 1.893808 CGTTGGCAGTTGCACTCCT 60.894 57.895 6.43 0.00 44.36 3.69
2029 3039 0.602638 CGTTGGCAGTTGCACTCCTA 60.603 55.000 6.43 0.00 44.36 2.94
2030 3040 1.160137 GTTGGCAGTTGCACTCCTAG 58.840 55.000 6.43 0.00 44.36 3.02
2031 3041 1.055849 TTGGCAGTTGCACTCCTAGA 58.944 50.000 6.43 0.00 44.36 2.43
2032 3042 1.055849 TGGCAGTTGCACTCCTAGAA 58.944 50.000 6.43 0.00 44.36 2.10
2033 3043 1.419762 TGGCAGTTGCACTCCTAGAAA 59.580 47.619 6.43 0.00 44.36 2.52
2034 3044 2.158682 TGGCAGTTGCACTCCTAGAAAA 60.159 45.455 6.43 0.00 44.36 2.29
2035 3045 3.084786 GGCAGTTGCACTCCTAGAAAAT 58.915 45.455 6.43 0.00 44.36 1.82
2036 3046 3.127721 GGCAGTTGCACTCCTAGAAAATC 59.872 47.826 6.43 0.00 44.36 2.17
2037 3047 4.006319 GCAGTTGCACTCCTAGAAAATCT 58.994 43.478 0.00 0.00 41.59 2.40
2038 3048 4.094146 GCAGTTGCACTCCTAGAAAATCTC 59.906 45.833 0.00 0.00 41.59 2.75
2039 3049 4.328440 CAGTTGCACTCCTAGAAAATCTCG 59.672 45.833 0.00 0.00 0.00 4.04
2040 3050 2.893637 TGCACTCCTAGAAAATCTCGC 58.106 47.619 0.00 0.00 0.00 5.03
2041 3051 2.233676 TGCACTCCTAGAAAATCTCGCA 59.766 45.455 0.00 0.00 0.00 5.10
2042 3052 2.605366 GCACTCCTAGAAAATCTCGCAC 59.395 50.000 0.00 0.00 0.00 5.34
2043 3053 3.849911 CACTCCTAGAAAATCTCGCACA 58.150 45.455 0.00 0.00 0.00 4.57
2044 3054 3.862267 CACTCCTAGAAAATCTCGCACAG 59.138 47.826 0.00 0.00 0.00 3.66
2045 3055 3.511934 ACTCCTAGAAAATCTCGCACAGT 59.488 43.478 0.00 0.00 0.00 3.55
2046 3056 4.021016 ACTCCTAGAAAATCTCGCACAGTT 60.021 41.667 0.00 0.00 0.00 3.16
2047 3057 5.185249 ACTCCTAGAAAATCTCGCACAGTTA 59.815 40.000 0.00 0.00 0.00 2.24
2048 3058 5.408356 TCCTAGAAAATCTCGCACAGTTAC 58.592 41.667 0.00 0.00 0.00 2.50
2049 3059 5.047590 TCCTAGAAAATCTCGCACAGTTACA 60.048 40.000 0.00 0.00 0.00 2.41
2050 3060 5.637810 CCTAGAAAATCTCGCACAGTTACAA 59.362 40.000 0.00 0.00 0.00 2.41
2051 3061 5.344207 AGAAAATCTCGCACAGTTACAAC 57.656 39.130 0.00 0.00 0.00 3.32
2052 3062 5.057149 AGAAAATCTCGCACAGTTACAACT 58.943 37.500 0.00 0.00 40.60 3.16
2053 3063 6.220930 AGAAAATCTCGCACAGTTACAACTA 58.779 36.000 0.00 0.00 37.08 2.24
2054 3064 6.704493 AGAAAATCTCGCACAGTTACAACTAA 59.296 34.615 0.00 0.00 37.08 2.24
2055 3065 7.387948 AGAAAATCTCGCACAGTTACAACTAAT 59.612 33.333 0.00 0.00 37.08 1.73
2056 3066 8.542497 AAAATCTCGCACAGTTACAACTAATA 57.458 30.769 0.00 0.00 37.08 0.98
2057 3067 7.757097 AATCTCGCACAGTTACAACTAATAG 57.243 36.000 0.00 0.00 37.08 1.73
2058 3068 6.505044 TCTCGCACAGTTACAACTAATAGA 57.495 37.500 0.00 0.00 37.08 1.98
2059 3069 6.320171 TCTCGCACAGTTACAACTAATAGAC 58.680 40.000 0.00 0.00 37.08 2.59
2060 3070 6.150641 TCTCGCACAGTTACAACTAATAGACT 59.849 38.462 0.00 0.00 37.08 3.24
2061 3071 6.684686 TCGCACAGTTACAACTAATAGACTT 58.315 36.000 0.00 0.00 37.08 3.01
2062 3072 6.584942 TCGCACAGTTACAACTAATAGACTTG 59.415 38.462 0.00 0.00 37.08 3.16
2063 3073 6.183360 CGCACAGTTACAACTAATAGACTTGG 60.183 42.308 0.00 0.00 37.08 3.61
2064 3074 6.649557 GCACAGTTACAACTAATAGACTTGGT 59.350 38.462 0.00 0.00 37.08 3.67
2065 3075 7.816031 GCACAGTTACAACTAATAGACTTGGTA 59.184 37.037 0.00 0.00 37.08 3.25
2066 3076 9.136952 CACAGTTACAACTAATAGACTTGGTAC 57.863 37.037 0.00 0.00 37.08 3.34
2067 3077 8.309656 ACAGTTACAACTAATAGACTTGGTACC 58.690 37.037 4.43 4.43 37.08 3.34
2068 3078 8.529476 CAGTTACAACTAATAGACTTGGTACCT 58.471 37.037 14.36 0.00 37.08 3.08
2069 3079 8.529476 AGTTACAACTAATAGACTTGGTACCTG 58.471 37.037 14.36 8.64 37.52 4.00
2070 3080 8.526147 GTTACAACTAATAGACTTGGTACCTGA 58.474 37.037 14.36 0.63 0.00 3.86
2071 3081 7.171630 ACAACTAATAGACTTGGTACCTGAG 57.828 40.000 14.36 13.29 0.00 3.35
2072 3082 6.724905 ACAACTAATAGACTTGGTACCTGAGT 59.275 38.462 17.83 17.83 0.00 3.41
2073 3083 7.234988 ACAACTAATAGACTTGGTACCTGAGTT 59.765 37.037 14.36 2.77 0.00 3.01
2074 3084 7.793948 ACTAATAGACTTGGTACCTGAGTTT 57.206 36.000 14.36 13.95 0.00 2.66
2075 3085 8.203681 ACTAATAGACTTGGTACCTGAGTTTT 57.796 34.615 14.36 13.14 0.00 2.43
2076 3086 8.095169 ACTAATAGACTTGGTACCTGAGTTTTG 58.905 37.037 14.36 11.08 0.00 2.44
2077 3087 4.086706 AGACTTGGTACCTGAGTTTTGG 57.913 45.455 14.36 0.00 0.00 3.28
2078 3088 3.458487 AGACTTGGTACCTGAGTTTTGGT 59.542 43.478 14.36 0.00 40.12 3.67
2079 3089 3.813724 GACTTGGTACCTGAGTTTTGGTC 59.186 47.826 14.36 4.63 37.74 4.02
2080 3090 2.536761 TGGTACCTGAGTTTTGGTCG 57.463 50.000 14.36 0.00 37.74 4.79
2081 3091 2.040939 TGGTACCTGAGTTTTGGTCGA 58.959 47.619 14.36 0.00 37.74 4.20
2082 3092 2.036733 TGGTACCTGAGTTTTGGTCGAG 59.963 50.000 14.36 0.00 37.74 4.04
2083 3093 2.612221 GGTACCTGAGTTTTGGTCGAGG 60.612 54.545 4.06 0.00 37.74 4.63
2084 3094 0.396811 ACCTGAGTTTTGGTCGAGGG 59.603 55.000 0.00 0.00 29.18 4.30
2085 3095 0.321653 CCTGAGTTTTGGTCGAGGGG 60.322 60.000 0.00 0.00 0.00 4.79
2086 3096 0.955919 CTGAGTTTTGGTCGAGGGGC 60.956 60.000 0.00 0.00 0.00 5.80
2087 3097 1.674651 GAGTTTTGGTCGAGGGGCC 60.675 63.158 0.00 0.00 0.00 5.80
2088 3098 2.125766 GAGTTTTGGTCGAGGGGCCT 62.126 60.000 0.84 0.00 0.00 5.19
2089 3099 0.838987 AGTTTTGGTCGAGGGGCCTA 60.839 55.000 0.84 0.00 0.00 3.93
2090 3100 0.037160 GTTTTGGTCGAGGGGCCTAA 59.963 55.000 0.84 0.00 0.00 2.69
2091 3101 0.996583 TTTTGGTCGAGGGGCCTAAT 59.003 50.000 0.84 0.00 0.00 1.73
2092 3102 1.882308 TTTGGTCGAGGGGCCTAATA 58.118 50.000 0.84 0.00 0.00 0.98
2093 3103 1.882308 TTGGTCGAGGGGCCTAATAA 58.118 50.000 0.84 0.00 0.00 1.40
2094 3104 1.882308 TGGTCGAGGGGCCTAATAAA 58.118 50.000 0.84 0.00 0.00 1.40
2095 3105 1.487558 TGGTCGAGGGGCCTAATAAAC 59.512 52.381 0.84 0.00 0.00 2.01
2096 3106 1.202734 GGTCGAGGGGCCTAATAAACC 60.203 57.143 0.84 0.00 0.00 3.27
2097 3107 1.134228 TCGAGGGGCCTAATAAACCC 58.866 55.000 0.84 0.00 43.69 4.11
2099 3109 4.914128 GGGGCCTAATAAACCCGG 57.086 61.111 0.84 0.00 45.27 5.73
2100 3110 2.233603 GGGGCCTAATAAACCCGGA 58.766 57.895 0.73 0.00 45.27 5.14
2101 3111 0.179009 GGGGCCTAATAAACCCGGAC 60.179 60.000 0.73 0.00 45.27 4.79
2102 3112 0.533531 GGGCCTAATAAACCCGGACG 60.534 60.000 0.73 0.00 32.92 4.79
2103 3113 0.533531 GGCCTAATAAACCCGGACGG 60.534 60.000 0.73 3.25 37.81 4.79
2104 3114 0.465287 GCCTAATAAACCCGGACGGA 59.535 55.000 13.13 0.00 37.50 4.69
2105 3115 1.539712 GCCTAATAAACCCGGACGGAG 60.540 57.143 13.13 5.04 37.50 4.63
2106 3116 1.069668 CCTAATAAACCCGGACGGAGG 59.930 57.143 13.13 5.18 37.50 4.30
2134 3144 0.248377 GTGAGCGATGAATGCTTGGC 60.248 55.000 0.00 0.00 44.18 4.52
2182 3198 3.342627 TTTGCACGAACTCGGCCG 61.343 61.111 22.12 22.12 44.95 6.13
2254 3274 3.948719 GGTGGCACTCCCGGAACA 61.949 66.667 18.45 0.00 35.69 3.18
2271 3291 3.257393 GAACAGATGAAGCAGATGACGT 58.743 45.455 0.00 0.00 0.00 4.34
2287 3307 0.108804 ACGTGCGACTTTGGATCGAT 60.109 50.000 0.00 0.00 42.25 3.59
2341 3361 1.841302 GACAGTGCCACAGGGGATGA 61.841 60.000 0.00 0.00 40.01 2.92
2342 3362 1.210204 ACAGTGCCACAGGGGATGAT 61.210 55.000 0.00 0.00 40.01 2.45
2343 3363 0.033796 CAGTGCCACAGGGGATGATT 60.034 55.000 0.00 0.00 40.01 2.57
2344 3364 0.706433 AGTGCCACAGGGGATGATTT 59.294 50.000 0.00 0.00 40.01 2.17
2345 3365 1.106285 GTGCCACAGGGGATGATTTC 58.894 55.000 0.00 0.00 40.01 2.17
2375 3395 1.329906 CATCTCATCTCGCTTGGTTGC 59.670 52.381 0.00 0.00 0.00 4.17
2397 3423 3.726517 CAACGGCGGCTTGGACAG 61.727 66.667 13.24 0.00 0.00 3.51
2398 3424 4.250305 AACGGCGGCTTGGACAGT 62.250 61.111 13.24 0.00 0.00 3.55
2462 3863 7.712639 CCAGTGATGAAATTTCTAGCTAGCTAA 59.287 37.037 24.20 13.01 0.00 3.09
2463 3864 8.763356 CAGTGATGAAATTTCTAGCTAGCTAAG 58.237 37.037 24.20 17.55 0.00 2.18
2475 3876 7.203910 TCTAGCTAGCTAAGTAGAAATTGTGC 58.796 38.462 24.20 0.00 0.00 4.57
2477 3878 4.025647 GCTAGCTAAGTAGAAATTGTGCCG 60.026 45.833 7.70 0.00 0.00 5.69
2478 3879 3.270877 AGCTAAGTAGAAATTGTGCCGG 58.729 45.455 0.00 0.00 0.00 6.13
2479 3880 3.055385 AGCTAAGTAGAAATTGTGCCGGA 60.055 43.478 5.05 0.00 0.00 5.14
2480 3881 3.687698 GCTAAGTAGAAATTGTGCCGGAA 59.312 43.478 5.05 0.00 0.00 4.30
2493 3894 3.749981 CGGAAGGTGCTGCTGTTT 58.250 55.556 0.00 0.00 0.00 2.83
2494 3895 1.283793 CGGAAGGTGCTGCTGTTTG 59.716 57.895 0.00 0.00 0.00 2.93
2495 3896 1.447317 CGGAAGGTGCTGCTGTTTGT 61.447 55.000 0.00 0.00 0.00 2.83
2496 3897 0.312102 GGAAGGTGCTGCTGTTTGTC 59.688 55.000 0.00 0.00 0.00 3.18
2497 3898 0.040958 GAAGGTGCTGCTGTTTGTCG 60.041 55.000 0.00 0.00 0.00 4.35
2498 3899 2.050985 GGTGCTGCTGTTTGTCGC 60.051 61.111 0.00 0.00 0.00 5.19
2499 3900 2.050985 GTGCTGCTGTTTGTCGCC 60.051 61.111 0.00 0.00 0.00 5.54
2500 3901 2.203195 TGCTGCTGTTTGTCGCCT 60.203 55.556 0.00 0.00 0.00 5.52
2501 3902 2.253758 TGCTGCTGTTTGTCGCCTC 61.254 57.895 0.00 0.00 0.00 4.70
2502 3903 2.253758 GCTGCTGTTTGTCGCCTCA 61.254 57.895 0.00 0.00 0.00 3.86
2503 3904 1.571460 CTGCTGTTTGTCGCCTCAC 59.429 57.895 0.00 0.00 0.00 3.51
2504 3905 2.162921 CTGCTGTTTGTCGCCTCACG 62.163 60.000 0.00 0.00 45.62 4.35
2505 3906 2.954753 GCTGTTTGTCGCCTCACGG 61.955 63.158 0.00 0.00 43.89 4.94
2506 3907 1.594293 CTGTTTGTCGCCTCACGGT 60.594 57.895 0.00 0.00 43.89 4.83
2507 3908 1.831389 CTGTTTGTCGCCTCACGGTG 61.831 60.000 0.56 0.56 43.89 4.94
2513 3914 2.268999 TCGCCTCACGGTGATTACA 58.731 52.632 11.86 0.00 44.63 2.41
2514 3915 0.172578 TCGCCTCACGGTGATTACAG 59.827 55.000 11.86 0.00 44.63 2.74
2515 3916 0.172578 CGCCTCACGGTGATTACAGA 59.827 55.000 11.86 0.00 43.70 3.41
2516 3917 1.799181 CGCCTCACGGTGATTACAGAG 60.799 57.143 11.86 0.00 43.70 3.35
2517 3918 1.204941 GCCTCACGGTGATTACAGAGT 59.795 52.381 11.86 0.00 0.00 3.24
2518 3919 2.353803 GCCTCACGGTGATTACAGAGTT 60.354 50.000 11.86 0.00 0.00 3.01
2519 3920 3.864921 GCCTCACGGTGATTACAGAGTTT 60.865 47.826 11.86 0.00 0.00 2.66
2520 3921 3.927142 CCTCACGGTGATTACAGAGTTTC 59.073 47.826 11.86 0.00 0.00 2.78
2521 3922 4.322049 CCTCACGGTGATTACAGAGTTTCT 60.322 45.833 11.86 0.00 0.00 2.52
2522 3923 5.209818 TCACGGTGATTACAGAGTTTCTT 57.790 39.130 6.76 0.00 0.00 2.52
2523 3924 5.607477 TCACGGTGATTACAGAGTTTCTTT 58.393 37.500 6.76 0.00 0.00 2.52
2524 3925 6.053005 TCACGGTGATTACAGAGTTTCTTTT 58.947 36.000 6.76 0.00 0.00 2.27
2525 3926 6.202188 TCACGGTGATTACAGAGTTTCTTTTC 59.798 38.462 6.76 0.00 0.00 2.29
2526 3927 5.176958 ACGGTGATTACAGAGTTTCTTTTCG 59.823 40.000 0.00 0.00 0.00 3.46
2527 3928 5.176958 CGGTGATTACAGAGTTTCTTTTCGT 59.823 40.000 0.00 0.00 0.00 3.85
2528 3929 6.364165 CGGTGATTACAGAGTTTCTTTTCGTA 59.636 38.462 0.00 0.00 0.00 3.43
2529 3930 7.508134 GGTGATTACAGAGTTTCTTTTCGTAC 58.492 38.462 0.00 0.00 0.00 3.67
2530 3931 7.359849 GGTGATTACAGAGTTTCTTTTCGTACC 60.360 40.741 0.00 0.00 0.00 3.34
2531 3932 7.170320 GTGATTACAGAGTTTCTTTTCGTACCA 59.830 37.037 0.00 0.00 0.00 3.25
2532 3933 7.876068 TGATTACAGAGTTTCTTTTCGTACCAT 59.124 33.333 0.00 0.00 0.00 3.55
2533 3934 5.924475 ACAGAGTTTCTTTTCGTACCATG 57.076 39.130 0.00 0.00 0.00 3.66
2534 3935 5.365619 ACAGAGTTTCTTTTCGTACCATGT 58.634 37.500 0.00 0.00 0.00 3.21
2535 3936 5.236478 ACAGAGTTTCTTTTCGTACCATGTG 59.764 40.000 0.00 0.00 0.00 3.21
2536 3937 4.213482 AGAGTTTCTTTTCGTACCATGTGC 59.787 41.667 0.00 0.00 0.00 4.57
2537 3938 4.134563 AGTTTCTTTTCGTACCATGTGCT 58.865 39.130 0.00 0.00 0.00 4.40
2538 3939 4.024048 AGTTTCTTTTCGTACCATGTGCTG 60.024 41.667 0.00 0.00 0.00 4.41
2539 3940 3.120321 TCTTTTCGTACCATGTGCTGT 57.880 42.857 0.00 0.00 0.00 4.40
2540 3941 3.064207 TCTTTTCGTACCATGTGCTGTC 58.936 45.455 0.00 0.00 0.00 3.51
2541 3942 2.535012 TTTCGTACCATGTGCTGTCA 57.465 45.000 0.00 0.00 0.00 3.58
2564 3965 2.316792 AGTTGACTTCACGATCGAACG 58.683 47.619 24.34 13.95 39.31 3.95
2572 3973 0.093026 CACGATCGAACGCAACCTTC 59.907 55.000 24.34 0.00 36.70 3.46
2650 4052 2.466846 CGTGAACGTAACCAACAGTCT 58.533 47.619 0.00 0.00 34.11 3.24
2660 4066 1.367471 CAACAGTCTGCCGGTGAGA 59.633 57.895 1.90 1.65 0.00 3.27
2717 4127 4.399483 AGTAGTGGTACTCCAAGGAAGA 57.601 45.455 0.00 0.00 46.15 2.87
2727 4137 2.943690 CTCCAAGGAAGATGATGTGCAG 59.056 50.000 0.00 0.00 0.00 4.41
2742 4153 0.181114 TGCAGAATCAATCCCCGAGG 59.819 55.000 0.00 0.00 0.00 4.63
2754 4165 3.712907 CCGAGGGGAAAAGCCGGA 61.713 66.667 5.05 0.00 42.49 5.14
2802 4218 0.934496 CTCGTCGTTGTCTTGCCAAA 59.066 50.000 0.00 0.00 0.00 3.28
2904 4323 1.285641 CGTCCACAATTTTGGCGCT 59.714 52.632 7.64 0.00 36.48 5.92
2957 4376 2.522193 CCTAGCCTCCGGGGAGAC 60.522 72.222 16.29 4.47 44.53 3.36
2964 4383 2.362120 TCCGGGGAGACGTTCCTC 60.362 66.667 0.00 10.45 45.98 3.71
2988 4407 3.666902 CGCCGTGAAGATTCATTCGTTTT 60.667 43.478 0.00 0.00 39.73 2.43
2993 4412 5.334105 CGTGAAGATTCATTCGTTTTGAGGT 60.334 40.000 0.00 0.00 39.73 3.85
3029 4448 5.106396 GGTCCTGTTTCACAAGATGAATGAG 60.106 44.000 0.00 0.00 46.80 2.90
3030 4449 5.005740 TCCTGTTTCACAAGATGAATGAGG 58.994 41.667 7.63 7.63 46.80 3.86
3031 4450 5.005740 CCTGTTTCACAAGATGAATGAGGA 58.994 41.667 8.01 0.00 46.80 3.71
3037 4456 4.940046 TCACAAGATGAATGAGGAAGAAGC 59.060 41.667 0.00 0.00 33.02 3.86
3075 4497 3.915437 AAAAACGTGACAGGCCAATAG 57.085 42.857 5.01 0.00 0.00 1.73
3082 4504 2.291741 GTGACAGGCCAATAGCTAATGC 59.708 50.000 5.01 3.83 43.05 3.56
3148 4571 7.322222 CGATCATATTCTCCAAATTTTCTTCGC 59.678 37.037 0.00 0.00 0.00 4.70
3211 4636 1.153765 GCGGGCTCCTCAAATTTGC 60.154 57.895 13.54 1.00 0.00 3.68
3274 4704 0.817634 TTGTCCTTGCAAGTCCGTGG 60.818 55.000 24.35 9.67 0.00 4.94
3275 4705 1.966451 GTCCTTGCAAGTCCGTGGG 60.966 63.158 24.35 8.92 0.00 4.61
3276 4706 2.144078 TCCTTGCAAGTCCGTGGGA 61.144 57.895 24.35 11.22 0.00 4.37
3277 4707 1.228124 CCTTGCAAGTCCGTGGGAA 60.228 57.895 24.35 0.00 31.38 3.97
3369 4810 3.770040 CGGATCTGGGGACGTGCA 61.770 66.667 9.96 0.00 0.00 4.57
3463 4915 2.506217 CGCGACGGCTCTGCTTTA 60.506 61.111 0.00 0.00 36.88 1.85
3480 4933 1.282382 TTAGGCTTTAGCTTCCCCGT 58.718 50.000 0.00 0.00 41.70 5.28
3486 4939 2.355412 GCTTTAGCTTCCCCGTAAAGGA 60.355 50.000 0.00 0.00 39.36 3.36
3633 5090 7.516785 CGGTGACATGTAACATTAATCTACTGC 60.517 40.741 15.45 0.00 0.00 4.40
3644 5101 7.603651 ACATTAATCTACTGCTAGTTATCGGG 58.396 38.462 0.00 0.00 0.00 5.14
3647 5104 2.621998 TCTACTGCTAGTTATCGGGTGC 59.378 50.000 0.00 0.00 0.00 5.01
3648 5105 0.464452 ACTGCTAGTTATCGGGTGCC 59.536 55.000 0.00 0.00 0.00 5.01
3650 5107 0.464036 TGCTAGTTATCGGGTGCCTG 59.536 55.000 0.00 0.00 0.00 4.85
3651 5108 0.880718 GCTAGTTATCGGGTGCCTGC 60.881 60.000 0.00 0.00 0.00 4.85
3674 5133 2.564947 CCTGCATGAGGGATAGGTACTC 59.435 54.545 0.00 0.00 37.91 2.59
3675 5134 3.505386 CTGCATGAGGGATAGGTACTCT 58.495 50.000 0.00 0.00 41.75 3.24
3759 5232 7.647715 TCTTTTTGTGTTTTATAAGTCTGCAGC 59.352 33.333 9.47 4.26 0.00 5.25
3770 5243 2.905880 CTGCAGCTATGGCCTGGC 60.906 66.667 11.05 11.05 39.73 4.85
3795 5268 3.228759 GTGATACCGCCGGGGCTA 61.229 66.667 14.15 4.19 40.62 3.93
3828 5302 5.924356 TGTTGACAATTTGGACAGAGAGTA 58.076 37.500 0.78 0.00 0.00 2.59
3833 5307 6.493802 TGACAATTTGGACAGAGAGTAGTAGT 59.506 38.462 0.78 0.00 0.00 2.73
3835 5309 5.821516 ATTTGGACAGAGAGTAGTAGTCG 57.178 43.478 0.00 0.00 0.00 4.18
3840 5314 1.593933 CAGAGAGTAGTAGTCGCCGTC 59.406 57.143 5.22 0.00 0.00 4.79
3841 5315 0.576328 GAGAGTAGTAGTCGCCGTCG 59.424 60.000 0.00 0.00 0.00 5.12
3842 5316 0.108424 AGAGTAGTAGTCGCCGTCGT 60.108 55.000 0.00 0.00 36.96 4.34
3843 5317 0.300193 GAGTAGTAGTCGCCGTCGTC 59.700 60.000 0.00 0.00 36.96 4.20
3909 5386 3.002348 GGCGAACCATGCTATTTGAGTAC 59.998 47.826 0.00 0.00 35.26 2.73
3927 5899 0.171679 ACGGTTATCGCGTGACATCA 59.828 50.000 5.77 0.00 43.89 3.07
4026 7807 9.486497 GATATCAATGATCGTGCCATATCTTAT 57.514 33.333 0.00 0.00 0.00 1.73
4060 7841 3.066291 ACTGGATGCGAAATGTAACCA 57.934 42.857 0.00 0.00 0.00 3.67
4061 7842 3.009723 ACTGGATGCGAAATGTAACCAG 58.990 45.455 0.00 0.00 45.78 4.00
4062 7843 3.009723 CTGGATGCGAAATGTAACCAGT 58.990 45.455 0.00 0.00 38.67 4.00
4063 7844 2.746904 TGGATGCGAAATGTAACCAGTG 59.253 45.455 0.00 0.00 0.00 3.66
4064 7845 3.006940 GGATGCGAAATGTAACCAGTGA 58.993 45.455 0.00 0.00 0.00 3.41
4065 7846 3.438781 GGATGCGAAATGTAACCAGTGAA 59.561 43.478 0.00 0.00 0.00 3.18
4068 7849 6.183360 GGATGCGAAATGTAACCAGTGAATTA 60.183 38.462 0.00 0.00 0.00 1.40
4069 7850 6.561737 TGCGAAATGTAACCAGTGAATTAA 57.438 33.333 0.00 0.00 0.00 1.40
4070 7851 7.151999 TGCGAAATGTAACCAGTGAATTAAT 57.848 32.000 0.00 0.00 0.00 1.40
4071 7852 7.247728 TGCGAAATGTAACCAGTGAATTAATC 58.752 34.615 0.00 0.00 0.00 1.75
4074 7855 9.277565 CGAAATGTAACCAGTGAATTAATCAAG 57.722 33.333 0.00 0.00 40.50 3.02
4079 7860 5.886960 ACCAGTGAATTAATCAAGAGCAC 57.113 39.130 0.00 0.00 40.50 4.40
4080 7861 4.702131 ACCAGTGAATTAATCAAGAGCACC 59.298 41.667 0.00 0.00 40.50 5.01
4703 9207 0.029567 CGTCATCGACTACCTGGAGC 59.970 60.000 0.00 0.00 39.71 4.70
5009 9525 1.106351 TGCGCCTTTCAAAGAGCCAA 61.106 50.000 4.18 0.00 33.22 4.52
5028 9544 0.680921 ATTGGGAGTTGGCATGTCGG 60.681 55.000 0.00 0.00 0.00 4.79
5071 9598 5.983118 TGTATCATAACGCAACAGATACTGG 59.017 40.000 0.00 0.00 40.84 4.00
5123 9650 4.104066 GCGCCTTTCTTCACTACTACTAC 58.896 47.826 0.00 0.00 0.00 2.73
5191 9718 1.596934 CCTCAGGTTTGGCGCTCTA 59.403 57.895 7.64 0.00 0.00 2.43
5192 9719 0.036388 CCTCAGGTTTGGCGCTCTAA 60.036 55.000 7.64 0.00 0.00 2.10
5218 9751 7.951347 AAAGAACTCATTTGCAATCCTAGAT 57.049 32.000 0.00 0.00 0.00 1.98
5221 9754 7.568349 AGAACTCATTTGCAATCCTAGATACA 58.432 34.615 0.00 0.00 0.00 2.29
5222 9755 8.216423 AGAACTCATTTGCAATCCTAGATACAT 58.784 33.333 0.00 0.00 0.00 2.29
5223 9756 8.757982 AACTCATTTGCAATCCTAGATACATT 57.242 30.769 0.00 0.00 0.00 2.71
5224 9757 8.757982 ACTCATTTGCAATCCTAGATACATTT 57.242 30.769 0.00 0.00 0.00 2.32
5225 9758 9.851686 ACTCATTTGCAATCCTAGATACATTTA 57.148 29.630 0.00 0.00 0.00 1.40
5250 9793 3.119388 TGCACAAAAGGAGCAATGCTATC 60.119 43.478 8.12 3.64 40.25 2.08
5259 9802 3.006537 GGAGCAATGCTATCATTTGGCAT 59.993 43.478 8.12 0.00 46.79 4.40
5438 10027 2.376109 GTCGAACCTCTCTATGACCCA 58.624 52.381 0.00 0.00 0.00 4.51
5482 10071 7.277174 TGTTTTCCCTTCTCTGATTTTTCTC 57.723 36.000 0.00 0.00 0.00 2.87
5491 10080 8.806146 CCTTCTCTGATTTTTCTCCCAAATAAA 58.194 33.333 0.00 0.00 0.00 1.40
5573 10162 8.882736 ACATTTCCTTGAGTGAAATTCAAAAAC 58.117 29.630 0.00 0.00 42.20 2.43
5721 10310 2.189521 GACATACCGGGCCCACTG 59.810 66.667 24.92 15.07 0.00 3.66
5725 10314 1.921346 ATACCGGGCCCACTGTTCA 60.921 57.895 24.92 1.59 0.00 3.18
5747 10336 2.446435 GTCCACATGGCACTAAATGGT 58.554 47.619 0.00 0.00 34.44 3.55
5751 10340 3.448301 CCACATGGCACTAAATGGTCAAT 59.552 43.478 0.00 0.00 0.00 2.57
5772 10361 9.816663 GTCAATACCGTTTGTTGACCGTTAAGG 62.817 44.444 10.87 0.00 43.55 2.69
5813 10405 5.704515 CCAACATTGTCATCTCTCTCAAACT 59.295 40.000 0.00 0.00 0.00 2.66
5821 10413 7.151308 TGTCATCTCTCTCAAACTTTCTTCTC 58.849 38.462 0.00 0.00 0.00 2.87
5894 10486 3.119955 CGAGGTAAGATCAGTCGTGTTGA 60.120 47.826 0.00 0.00 0.00 3.18
5903 10495 2.906388 TCGTGTTGACGGGGTCGA 60.906 61.111 0.00 0.00 46.11 4.20
5955 10547 3.458163 CGCGGTCTTCCCTGGCTA 61.458 66.667 0.00 0.00 0.00 3.93
5963 10555 1.362932 TCTTCCCTGGCTAGAGAAGGT 59.637 52.381 18.98 0.00 37.05 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.461431 TGTGATACAGAATACTCACCGTGT 59.539 41.667 0.00 0.00 37.74 4.49
313 322 3.189702 GCAAATGCAGCAAACAAATCCAT 59.810 39.130 0.00 0.00 41.59 3.41
325 334 2.605818 CACAACATATGGCAAATGCAGC 59.394 45.455 7.80 0.00 44.36 5.25
562 596 5.014544 AGCATGCAAATCCATATAGGTAGGT 59.985 40.000 21.98 0.00 39.02 3.08
601 635 2.498481 CAGACCCCAACATGAATTGCAT 59.502 45.455 0.00 0.00 37.85 3.96
623 660 5.628797 ATTTTTGTGTCCATTCCCTTGTT 57.371 34.783 0.00 0.00 0.00 2.83
636 673 5.465935 AGACAAACACGTCAATTTTTGTGT 58.534 33.333 8.09 4.83 46.76 3.72
717 754 7.657761 TGGTTGCACCGAAAAATATTACAAATT 59.342 29.630 0.00 0.00 42.58 1.82
814 851 5.936372 TCGTTTAGAGTCTGACTAGTAAGCA 59.064 40.000 10.86 0.00 0.00 3.91
831 868 2.884207 GGCGGGCTCGTCGTTTAG 60.884 66.667 8.30 0.00 38.89 1.85
837 874 3.812892 TATTTTACCGGCGGGCTCGTC 62.813 57.143 31.78 3.04 38.89 4.20
839 876 0.601841 ATATTTTACCGGCGGGCTCG 60.602 55.000 31.78 0.00 36.48 5.03
844 881 1.425412 CGAGGATATTTTACCGGCGG 58.575 55.000 27.06 27.06 0.00 6.13
845 882 0.788391 GCGAGGATATTTTACCGGCG 59.212 55.000 0.00 0.00 34.16 6.46
846 883 0.788391 CGCGAGGATATTTTACCGGC 59.212 55.000 0.00 0.00 0.00 6.13
864 901 3.846430 GGGGCCGAGGGAAGTACG 61.846 72.222 0.00 0.00 0.00 3.67
867 904 2.562973 AATAGGGGGCCGAGGGAAGT 62.563 60.000 0.00 0.00 0.00 3.01
876 913 3.399983 TGAGGGTTTATTAATAGGGGGCC 59.600 47.826 0.00 0.00 0.00 5.80
877 914 4.141111 TGTGAGGGTTTATTAATAGGGGGC 60.141 45.833 0.00 0.00 0.00 5.80
960 1015 3.952628 GACTGCCCGGTCCCTTTCG 62.953 68.421 0.00 0.00 0.00 3.46
962 1017 2.852075 TGACTGCCCGGTCCCTTT 60.852 61.111 0.00 0.00 35.54 3.11
984 1039 2.072090 CATCTCGATCTCGCGTCGC 61.072 63.158 12.20 7.29 38.88 5.19
985 1040 0.042100 TTCATCTCGATCTCGCGTCG 60.042 55.000 5.77 8.86 40.30 5.12
986 1041 1.661743 CCTTCATCTCGATCTCGCGTC 60.662 57.143 5.77 0.00 39.60 5.19
987 1042 0.309302 CCTTCATCTCGATCTCGCGT 59.691 55.000 5.77 0.00 39.60 6.01
1065 1120 1.216710 GTCGAGGTTGGAGAGCCAG 59.783 63.158 0.00 0.00 46.91 4.85
1165 1229 2.368011 CGAAGAACCCCTCCCCCTC 61.368 68.421 0.00 0.00 0.00 4.30
1166 1230 2.285442 CGAAGAACCCCTCCCCCT 60.285 66.667 0.00 0.00 0.00 4.79
1167 1231 4.111053 GCGAAGAACCCCTCCCCC 62.111 72.222 0.00 0.00 0.00 5.40
1168 1232 4.468689 CGCGAAGAACCCCTCCCC 62.469 72.222 0.00 0.00 0.00 4.81
1456 1538 1.206115 GCGCGAAAATAAATGGGCGG 61.206 55.000 12.10 0.00 43.43 6.13
1595 2485 0.039798 GTCGCACGACTGTCAGGTAA 60.040 55.000 15.56 0.00 41.57 2.85
1600 2490 1.299089 CTGTGTCGCACGACTGTCA 60.299 57.895 22.26 16.60 44.80 3.58
1626 2516 7.308782 AGAAGATTATGTTTCGATCCAACAC 57.691 36.000 3.38 0.00 36.97 3.32
1643 2533 6.607004 TTAGGTCCTCGAAAGAAGAAGATT 57.393 37.500 0.00 0.00 41.32 2.40
1646 2536 5.539048 TGTTTAGGTCCTCGAAAGAAGAAG 58.461 41.667 0.00 0.00 41.32 2.85
1655 2629 8.319146 AGATAAAAAGAATGTTTAGGTCCTCGA 58.681 33.333 0.00 0.00 29.96 4.04
1682 2656 6.040878 GCTGCTAGTATTTCTTAAACCTCGA 58.959 40.000 0.00 0.00 0.00 4.04
1698 2672 3.226777 AGATAGATTCCACGCTGCTAGT 58.773 45.455 0.00 0.00 0.00 2.57
1703 2677 7.255104 GGAGATAGATAGATAGATTCCACGCTG 60.255 44.444 0.00 0.00 0.00 5.18
1814 2819 3.197790 CCAAGGATGCTCGCGTGG 61.198 66.667 5.77 0.00 0.00 4.94
1815 2820 2.125552 TCCAAGGATGCTCGCGTG 60.126 61.111 5.77 4.44 0.00 5.34
1846 2851 1.222300 AAATAGAACGCACACGCACA 58.778 45.000 0.00 0.00 45.53 4.57
1873 2883 5.478407 TCAACGACGACTACCCGATATATA 58.522 41.667 0.00 0.00 0.00 0.86
1874 2884 4.318332 TCAACGACGACTACCCGATATAT 58.682 43.478 0.00 0.00 0.00 0.86
1875 2885 3.727726 TCAACGACGACTACCCGATATA 58.272 45.455 0.00 0.00 0.00 0.86
1876 2886 2.564771 TCAACGACGACTACCCGATAT 58.435 47.619 0.00 0.00 0.00 1.63
1954 2964 1.808531 GAGCCCAGTTGTTGCATGCA 61.809 55.000 18.46 18.46 0.00 3.96
1955 2965 1.080298 GAGCCCAGTTGTTGCATGC 60.080 57.895 11.82 11.82 0.00 4.06
1956 2966 0.524862 GAGAGCCCAGTTGTTGCATG 59.475 55.000 0.00 0.00 0.00 4.06
1957 2967 0.957395 CGAGAGCCCAGTTGTTGCAT 60.957 55.000 0.00 0.00 0.00 3.96
1959 2969 0.320421 TACGAGAGCCCAGTTGTTGC 60.320 55.000 0.00 0.00 0.00 4.17
1960 2970 1.272490 TCTACGAGAGCCCAGTTGTTG 59.728 52.381 0.00 0.00 0.00 3.33
1961 2971 1.546476 CTCTACGAGAGCCCAGTTGTT 59.454 52.381 0.00 0.00 35.30 2.83
1963 2973 1.464734 TCTCTACGAGAGCCCAGTTG 58.535 55.000 6.93 0.00 42.04 3.16
1964 2974 3.981051 TCTCTACGAGAGCCCAGTT 57.019 52.632 6.93 0.00 42.04 3.16
1972 2982 0.389556 ACGCGTGACTCTCTACGAGA 60.390 55.000 12.93 0.00 42.62 4.04
1974 2984 1.785951 CACGCGTGACTCTCTACGA 59.214 57.895 34.93 0.00 42.54 3.43
1975 2985 1.863880 GCACGCGTGACTCTCTACG 60.864 63.158 41.19 12.59 42.79 3.51
1976 2986 0.725686 TAGCACGCGTGACTCTCTAC 59.274 55.000 41.19 21.02 0.00 2.59
1977 2987 1.397343 CTTAGCACGCGTGACTCTCTA 59.603 52.381 41.19 27.43 0.00 2.43
1979 2989 1.406970 GCTTAGCACGCGTGACTCTC 61.407 60.000 41.19 23.25 0.00 3.20
1980 2990 1.444553 GCTTAGCACGCGTGACTCT 60.445 57.895 41.19 29.17 0.00 3.24
1982 2992 1.734477 CAGCTTAGCACGCGTGACT 60.734 57.895 41.19 34.22 0.00 3.41
1984 2994 2.432456 CCAGCTTAGCACGCGTGA 60.432 61.111 41.19 20.36 0.00 4.35
1989 2999 3.188786 GTCGGCCAGCTTAGCACG 61.189 66.667 7.07 5.66 0.00 5.34
1992 3002 4.821589 AGCGTCGGCCAGCTTAGC 62.822 66.667 11.11 0.00 41.52 3.09
1993 3003 2.583593 GAGCGTCGGCCAGCTTAG 60.584 66.667 16.95 0.00 44.69 2.18
1994 3004 4.492160 CGAGCGTCGGCCAGCTTA 62.492 66.667 16.95 0.00 44.69 3.09
2003 3013 3.036084 AACTGCCAACGAGCGTCG 61.036 61.111 0.00 5.97 46.93 5.12
2004 3014 2.551270 CAACTGCCAACGAGCGTC 59.449 61.111 0.00 0.00 34.65 5.19
2005 3015 3.649986 GCAACTGCCAACGAGCGT 61.650 61.111 0.00 0.00 34.65 5.07
2006 3016 3.648982 TGCAACTGCCAACGAGCG 61.649 61.111 0.00 0.00 41.18 5.03
2007 3017 2.050985 GTGCAACTGCCAACGAGC 60.051 61.111 0.00 0.00 41.18 5.03
2018 3028 3.062774 GCGAGATTTTCTAGGAGTGCAAC 59.937 47.826 0.00 0.00 0.00 4.17
2019 3029 3.262420 GCGAGATTTTCTAGGAGTGCAA 58.738 45.455 0.00 0.00 0.00 4.08
2020 3030 2.233676 TGCGAGATTTTCTAGGAGTGCA 59.766 45.455 0.00 0.00 0.00 4.57
2021 3031 2.605366 GTGCGAGATTTTCTAGGAGTGC 59.395 50.000 0.00 0.00 0.00 4.40
2022 3032 3.849911 TGTGCGAGATTTTCTAGGAGTG 58.150 45.455 0.00 0.00 0.00 3.51
2023 3033 3.511934 ACTGTGCGAGATTTTCTAGGAGT 59.488 43.478 0.00 0.00 0.00 3.85
2024 3034 4.116747 ACTGTGCGAGATTTTCTAGGAG 57.883 45.455 0.00 0.00 0.00 3.69
2025 3035 4.537135 AACTGTGCGAGATTTTCTAGGA 57.463 40.909 0.00 0.00 0.00 2.94
2026 3036 5.168569 TGTAACTGTGCGAGATTTTCTAGG 58.831 41.667 0.00 0.00 0.00 3.02
2027 3037 6.366332 AGTTGTAACTGTGCGAGATTTTCTAG 59.634 38.462 0.00 0.00 37.98 2.43
2028 3038 6.220930 AGTTGTAACTGTGCGAGATTTTCTA 58.779 36.000 0.00 0.00 37.98 2.10
2029 3039 5.057149 AGTTGTAACTGTGCGAGATTTTCT 58.943 37.500 0.00 0.00 37.98 2.52
2030 3040 5.344207 AGTTGTAACTGTGCGAGATTTTC 57.656 39.130 0.00 0.00 37.98 2.29
2031 3041 6.854496 TTAGTTGTAACTGTGCGAGATTTT 57.146 33.333 7.50 0.00 40.07 1.82
2032 3042 8.033038 TCTATTAGTTGTAACTGTGCGAGATTT 58.967 33.333 7.50 0.00 40.07 2.17
2033 3043 7.488471 GTCTATTAGTTGTAACTGTGCGAGATT 59.512 37.037 7.50 0.00 40.07 2.40
2034 3044 6.973474 GTCTATTAGTTGTAACTGTGCGAGAT 59.027 38.462 7.50 0.00 40.07 2.75
2035 3045 6.150641 AGTCTATTAGTTGTAACTGTGCGAGA 59.849 38.462 7.50 1.42 40.07 4.04
2036 3046 6.323266 AGTCTATTAGTTGTAACTGTGCGAG 58.677 40.000 7.50 0.00 40.07 5.03
2037 3047 6.263516 AGTCTATTAGTTGTAACTGTGCGA 57.736 37.500 7.50 0.00 40.07 5.10
2038 3048 6.183360 CCAAGTCTATTAGTTGTAACTGTGCG 60.183 42.308 7.50 0.00 40.07 5.34
2039 3049 6.649557 ACCAAGTCTATTAGTTGTAACTGTGC 59.350 38.462 7.50 0.00 40.07 4.57
2040 3050 9.136952 GTACCAAGTCTATTAGTTGTAACTGTG 57.863 37.037 7.50 0.00 40.07 3.66
2041 3051 8.309656 GGTACCAAGTCTATTAGTTGTAACTGT 58.690 37.037 7.15 0.00 40.07 3.55
2042 3052 8.529476 AGGTACCAAGTCTATTAGTTGTAACTG 58.471 37.037 15.94 0.00 40.07 3.16
2043 3053 8.529476 CAGGTACCAAGTCTATTAGTTGTAACT 58.471 37.037 15.94 2.51 42.91 2.24
2044 3054 8.526147 TCAGGTACCAAGTCTATTAGTTGTAAC 58.474 37.037 15.94 0.00 36.88 2.50
2045 3055 8.654485 TCAGGTACCAAGTCTATTAGTTGTAA 57.346 34.615 15.94 0.00 36.88 2.41
2046 3056 7.892241 ACTCAGGTACCAAGTCTATTAGTTGTA 59.108 37.037 15.94 0.00 36.88 2.41
2047 3057 6.724905 ACTCAGGTACCAAGTCTATTAGTTGT 59.275 38.462 15.94 0.00 36.88 3.32
2048 3058 7.171630 ACTCAGGTACCAAGTCTATTAGTTG 57.828 40.000 15.94 0.00 38.13 3.16
2049 3059 7.793948 AACTCAGGTACCAAGTCTATTAGTT 57.206 36.000 15.94 7.68 0.00 2.24
2050 3060 7.793948 AAACTCAGGTACCAAGTCTATTAGT 57.206 36.000 15.94 1.86 0.00 2.24
2051 3061 7.549488 CCAAAACTCAGGTACCAAGTCTATTAG 59.451 40.741 15.94 1.24 0.00 1.73
2052 3062 7.016858 ACCAAAACTCAGGTACCAAGTCTATTA 59.983 37.037 15.94 0.00 36.07 0.98
2053 3063 6.183361 ACCAAAACTCAGGTACCAAGTCTATT 60.183 38.462 15.94 10.08 36.07 1.73
2054 3064 5.309806 ACCAAAACTCAGGTACCAAGTCTAT 59.690 40.000 15.94 4.89 36.07 1.98
2055 3065 4.657039 ACCAAAACTCAGGTACCAAGTCTA 59.343 41.667 15.94 0.00 36.07 2.59
2056 3066 3.458487 ACCAAAACTCAGGTACCAAGTCT 59.542 43.478 15.94 0.69 36.07 3.24
2057 3067 3.813724 GACCAAAACTCAGGTACCAAGTC 59.186 47.826 15.94 3.45 38.50 3.01
2058 3068 3.743269 CGACCAAAACTCAGGTACCAAGT 60.743 47.826 15.94 14.12 38.50 3.16
2059 3069 2.806244 CGACCAAAACTCAGGTACCAAG 59.194 50.000 15.94 13.44 38.50 3.61
2060 3070 2.435069 TCGACCAAAACTCAGGTACCAA 59.565 45.455 15.94 0.13 38.50 3.67
2061 3071 2.036733 CTCGACCAAAACTCAGGTACCA 59.963 50.000 15.94 0.00 38.50 3.25
2062 3072 2.612221 CCTCGACCAAAACTCAGGTACC 60.612 54.545 2.73 2.73 38.50 3.34
2063 3073 2.612221 CCCTCGACCAAAACTCAGGTAC 60.612 54.545 0.00 0.00 38.50 3.34
2064 3074 1.621814 CCCTCGACCAAAACTCAGGTA 59.378 52.381 0.00 0.00 38.50 3.08
2065 3075 0.396811 CCCTCGACCAAAACTCAGGT 59.603 55.000 0.00 0.00 41.83 4.00
2066 3076 0.321653 CCCCTCGACCAAAACTCAGG 60.322 60.000 0.00 0.00 0.00 3.86
2067 3077 0.955919 GCCCCTCGACCAAAACTCAG 60.956 60.000 0.00 0.00 0.00 3.35
2068 3078 1.072505 GCCCCTCGACCAAAACTCA 59.927 57.895 0.00 0.00 0.00 3.41
2069 3079 1.674651 GGCCCCTCGACCAAAACTC 60.675 63.158 0.00 0.00 0.00 3.01
2070 3080 0.838987 TAGGCCCCTCGACCAAAACT 60.839 55.000 0.00 0.00 0.00 2.66
2071 3081 0.037160 TTAGGCCCCTCGACCAAAAC 59.963 55.000 0.00 0.00 0.00 2.43
2072 3082 0.996583 ATTAGGCCCCTCGACCAAAA 59.003 50.000 0.00 0.00 0.00 2.44
2073 3083 1.882308 TATTAGGCCCCTCGACCAAA 58.118 50.000 0.00 0.00 0.00 3.28
2074 3084 1.882308 TTATTAGGCCCCTCGACCAA 58.118 50.000 0.00 0.00 0.00 3.67
2075 3085 1.487558 GTTTATTAGGCCCCTCGACCA 59.512 52.381 0.00 0.00 0.00 4.02
2076 3086 1.202734 GGTTTATTAGGCCCCTCGACC 60.203 57.143 0.00 0.00 0.00 4.79
2077 3087 1.202734 GGGTTTATTAGGCCCCTCGAC 60.203 57.143 0.00 0.00 36.46 4.20
2078 3088 1.134228 GGGTTTATTAGGCCCCTCGA 58.866 55.000 0.00 0.00 36.46 4.04
2079 3089 0.250166 CGGGTTTATTAGGCCCCTCG 60.250 60.000 0.00 0.00 39.22 4.63
2080 3090 0.109913 CCGGGTTTATTAGGCCCCTC 59.890 60.000 0.00 0.00 39.22 4.30
2081 3091 0.327770 TCCGGGTTTATTAGGCCCCT 60.328 55.000 0.00 0.00 39.22 4.79
2082 3092 0.179009 GTCCGGGTTTATTAGGCCCC 60.179 60.000 0.00 0.00 39.22 5.80
2083 3093 0.533531 CGTCCGGGTTTATTAGGCCC 60.534 60.000 0.00 0.00 39.03 5.80
2084 3094 0.533531 CCGTCCGGGTTTATTAGGCC 60.534 60.000 0.00 0.00 0.00 5.19
2085 3095 0.465287 TCCGTCCGGGTTTATTAGGC 59.535 55.000 0.00 0.00 37.00 3.93
2086 3096 1.069668 CCTCCGTCCGGGTTTATTAGG 59.930 57.143 0.00 0.00 37.00 2.69
2087 3097 1.069668 CCCTCCGTCCGGGTTTATTAG 59.930 57.143 0.00 0.00 36.91 1.73
2088 3098 1.122227 CCCTCCGTCCGGGTTTATTA 58.878 55.000 0.00 0.00 36.91 0.98
2089 3099 0.618393 TCCCTCCGTCCGGGTTTATT 60.618 55.000 0.00 0.00 42.56 1.40
2090 3100 1.002017 TCCCTCCGTCCGGGTTTAT 59.998 57.895 0.00 0.00 42.56 1.40
2091 3101 1.683365 CTCCCTCCGTCCGGGTTTA 60.683 63.158 0.00 0.00 42.56 2.01
2092 3102 2.445492 TACTCCCTCCGTCCGGGTTT 62.445 60.000 0.00 0.00 42.56 3.27
2093 3103 2.445492 TTACTCCCTCCGTCCGGGTT 62.445 60.000 0.00 0.00 42.56 4.11
2094 3104 2.445492 TTTACTCCCTCCGTCCGGGT 62.445 60.000 0.00 0.00 42.56 5.28
2095 3105 1.673808 CTTTACTCCCTCCGTCCGGG 61.674 65.000 0.00 0.00 43.38 5.73
2096 3106 1.673808 CCTTTACTCCCTCCGTCCGG 61.674 65.000 0.00 0.00 0.00 5.14
2097 3107 0.969409 ACCTTTACTCCCTCCGTCCG 60.969 60.000 0.00 0.00 0.00 4.79
2098 3108 0.535797 CACCTTTACTCCCTCCGTCC 59.464 60.000 0.00 0.00 0.00 4.79
2099 3109 1.477295 CTCACCTTTACTCCCTCCGTC 59.523 57.143 0.00 0.00 0.00 4.79
2100 3110 1.558233 CTCACCTTTACTCCCTCCGT 58.442 55.000 0.00 0.00 0.00 4.69
2101 3111 0.175989 GCTCACCTTTACTCCCTCCG 59.824 60.000 0.00 0.00 0.00 4.63
2102 3112 0.175989 CGCTCACCTTTACTCCCTCC 59.824 60.000 0.00 0.00 0.00 4.30
2103 3113 1.183549 TCGCTCACCTTTACTCCCTC 58.816 55.000 0.00 0.00 0.00 4.30
2104 3114 1.482593 CATCGCTCACCTTTACTCCCT 59.517 52.381 0.00 0.00 0.00 4.20
2105 3115 1.480954 TCATCGCTCACCTTTACTCCC 59.519 52.381 0.00 0.00 0.00 4.30
2106 3116 2.961526 TCATCGCTCACCTTTACTCC 57.038 50.000 0.00 0.00 0.00 3.85
2107 3117 3.001736 GCATTCATCGCTCACCTTTACTC 59.998 47.826 0.00 0.00 0.00 2.59
2108 3118 2.939103 GCATTCATCGCTCACCTTTACT 59.061 45.455 0.00 0.00 0.00 2.24
2109 3119 2.939103 AGCATTCATCGCTCACCTTTAC 59.061 45.455 0.00 0.00 33.35 2.01
2254 3274 1.649664 GCACGTCATCTGCTTCATCT 58.350 50.000 0.00 0.00 0.00 2.90
2271 3291 3.362581 GGATCGATCCAAAGTCGCA 57.637 52.632 34.65 0.00 46.38 5.10
2327 3347 0.703488 TGAAATCATCCCCTGTGGCA 59.297 50.000 0.00 0.00 0.00 4.92
2341 3361 6.574662 CGAGATGAGATGGGATGAGATGAAAT 60.575 42.308 0.00 0.00 0.00 2.17
2342 3362 5.279356 CGAGATGAGATGGGATGAGATGAAA 60.279 44.000 0.00 0.00 0.00 2.69
2343 3363 4.220163 CGAGATGAGATGGGATGAGATGAA 59.780 45.833 0.00 0.00 0.00 2.57
2344 3364 3.762823 CGAGATGAGATGGGATGAGATGA 59.237 47.826 0.00 0.00 0.00 2.92
2345 3365 3.676598 GCGAGATGAGATGGGATGAGATG 60.677 52.174 0.00 0.00 0.00 2.90
2354 3374 1.938577 CAACCAAGCGAGATGAGATGG 59.061 52.381 0.00 0.00 0.00 3.51
2375 3395 2.354539 CAAGCCGCCGTTGGTTTG 60.355 61.111 5.58 5.58 42.58 2.93
2462 3863 2.039879 ACCTTCCGGCACAATTTCTACT 59.960 45.455 0.00 0.00 0.00 2.57
2463 3864 2.161609 CACCTTCCGGCACAATTTCTAC 59.838 50.000 0.00 0.00 0.00 2.59
2475 3876 1.898574 AAACAGCAGCACCTTCCGG 60.899 57.895 0.00 0.00 0.00 5.14
2477 3878 0.312102 GACAAACAGCAGCACCTTCC 59.688 55.000 0.00 0.00 0.00 3.46
2478 3879 0.040958 CGACAAACAGCAGCACCTTC 60.041 55.000 0.00 0.00 0.00 3.46
2479 3880 2.024918 CGACAAACAGCAGCACCTT 58.975 52.632 0.00 0.00 0.00 3.50
2480 3881 2.546494 GCGACAAACAGCAGCACCT 61.546 57.895 0.00 0.00 0.00 4.00
2482 3883 2.050985 GGCGACAAACAGCAGCAC 60.051 61.111 0.00 0.00 34.54 4.40
2484 3885 2.253758 TGAGGCGACAAACAGCAGC 61.254 57.895 0.00 0.00 34.54 5.25
2485 3886 1.571460 GTGAGGCGACAAACAGCAG 59.429 57.895 0.00 0.00 34.54 4.24
2486 3887 2.243957 CGTGAGGCGACAAACAGCA 61.244 57.895 0.00 0.00 44.77 4.41
2487 3888 2.551270 CGTGAGGCGACAAACAGC 59.449 61.111 0.00 0.00 44.77 4.40
2499 3900 4.810790 AGAAACTCTGTAATCACCGTGAG 58.189 43.478 7.41 0.00 0.00 3.51
2500 3901 4.866508 AGAAACTCTGTAATCACCGTGA 57.133 40.909 3.10 3.10 0.00 4.35
2501 3902 5.924475 AAAGAAACTCTGTAATCACCGTG 57.076 39.130 0.00 0.00 0.00 4.94
2502 3903 5.176958 CGAAAAGAAACTCTGTAATCACCGT 59.823 40.000 0.00 0.00 0.00 4.83
2503 3904 5.176958 ACGAAAAGAAACTCTGTAATCACCG 59.823 40.000 0.00 0.00 0.00 4.94
2504 3905 6.541111 ACGAAAAGAAACTCTGTAATCACC 57.459 37.500 0.00 0.00 0.00 4.02
2505 3906 7.170320 TGGTACGAAAAGAAACTCTGTAATCAC 59.830 37.037 0.00 0.00 0.00 3.06
2506 3907 7.211573 TGGTACGAAAAGAAACTCTGTAATCA 58.788 34.615 0.00 0.00 0.00 2.57
2507 3908 7.647907 TGGTACGAAAAGAAACTCTGTAATC 57.352 36.000 0.00 0.00 0.00 1.75
2508 3909 7.660208 ACATGGTACGAAAAGAAACTCTGTAAT 59.340 33.333 0.00 0.00 0.00 1.89
2509 3910 6.987992 ACATGGTACGAAAAGAAACTCTGTAA 59.012 34.615 0.00 0.00 0.00 2.41
2510 3911 6.422701 CACATGGTACGAAAAGAAACTCTGTA 59.577 38.462 0.00 0.00 0.00 2.74
2511 3912 5.236478 CACATGGTACGAAAAGAAACTCTGT 59.764 40.000 0.00 0.00 0.00 3.41
2512 3913 5.679906 CACATGGTACGAAAAGAAACTCTG 58.320 41.667 0.00 0.00 0.00 3.35
2513 3914 4.213482 GCACATGGTACGAAAAGAAACTCT 59.787 41.667 0.00 0.00 0.00 3.24
2514 3915 4.213482 AGCACATGGTACGAAAAGAAACTC 59.787 41.667 0.00 0.00 0.00 3.01
2515 3916 4.024048 CAGCACATGGTACGAAAAGAAACT 60.024 41.667 0.00 0.00 0.00 2.66
2516 3917 4.219033 CAGCACATGGTACGAAAAGAAAC 58.781 43.478 0.00 0.00 0.00 2.78
2517 3918 3.880490 ACAGCACATGGTACGAAAAGAAA 59.120 39.130 0.00 0.00 0.00 2.52
2518 3919 3.472652 ACAGCACATGGTACGAAAAGAA 58.527 40.909 0.00 0.00 0.00 2.52
2519 3920 3.064207 GACAGCACATGGTACGAAAAGA 58.936 45.455 0.00 0.00 0.00 2.52
2520 3921 2.805671 TGACAGCACATGGTACGAAAAG 59.194 45.455 0.00 0.00 0.00 2.27
2521 3922 2.805671 CTGACAGCACATGGTACGAAAA 59.194 45.455 0.00 0.00 0.00 2.29
2522 3923 2.224185 ACTGACAGCACATGGTACGAAA 60.224 45.455 1.25 0.00 0.00 3.46
2523 3924 1.343142 ACTGACAGCACATGGTACGAA 59.657 47.619 1.25 0.00 0.00 3.85
2524 3925 0.966179 ACTGACAGCACATGGTACGA 59.034 50.000 1.25 0.00 0.00 3.43
2525 3926 2.094700 ACTACTGACAGCACATGGTACG 60.095 50.000 1.25 0.00 0.00 3.67
2526 3927 3.594603 ACTACTGACAGCACATGGTAC 57.405 47.619 1.25 0.00 0.00 3.34
2527 3928 3.576550 TCAACTACTGACAGCACATGGTA 59.423 43.478 1.25 0.00 0.00 3.25
2528 3929 2.368548 TCAACTACTGACAGCACATGGT 59.631 45.455 1.25 0.00 0.00 3.55
2529 3930 3.044235 TCAACTACTGACAGCACATGG 57.956 47.619 1.25 0.00 0.00 3.66
2539 3940 3.749609 TCGATCGTGAAGTCAACTACTGA 59.250 43.478 15.94 0.00 38.88 3.41
2540 3941 4.079665 TCGATCGTGAAGTCAACTACTG 57.920 45.455 15.94 0.00 38.88 2.74
2541 3942 4.474113 GTTCGATCGTGAAGTCAACTACT 58.526 43.478 15.94 0.00 41.49 2.57
2564 3965 3.339141 CCTAACCAGAAGAGAAGGTTGC 58.661 50.000 6.34 0.00 44.80 4.17
2572 3973 1.902508 TGCACTCCCTAACCAGAAGAG 59.097 52.381 0.00 0.00 0.00 2.85
2650 4052 0.461548 GTCATCTCATCTCACCGGCA 59.538 55.000 0.00 0.00 0.00 5.69
2660 4066 5.761205 ACTACTGGTCACTAGTCATCTCAT 58.239 41.667 0.00 0.00 0.00 2.90
2717 4127 3.228453 GGGGATTGATTCTGCACATCAT 58.772 45.455 4.93 0.00 30.63 2.45
2749 4160 0.176680 TCAAGATCAGAAGCTCCGGC 59.823 55.000 0.00 0.00 39.06 6.13
2750 4161 1.480137 AGTCAAGATCAGAAGCTCCGG 59.520 52.381 0.00 0.00 0.00 5.14
2754 4165 2.673610 GCGACAGTCAAGATCAGAAGCT 60.674 50.000 0.41 0.00 0.00 3.74
2802 4218 2.920645 CGCGTCTGGACTGGAGTGT 61.921 63.158 0.00 0.00 0.00 3.55
2883 4302 1.284408 GCCAAAATTGTGGACGCGA 59.716 52.632 19.53 0.00 41.65 5.87
2904 4323 4.308458 CGCGGGACACTGAACCCA 62.308 66.667 0.00 0.00 45.83 4.51
2952 4371 2.490685 GGCGAGAGGAACGTCTCC 59.509 66.667 15.61 8.26 45.81 3.71
2957 4376 1.801913 CTTCACGGCGAGAGGAACG 60.802 63.158 16.62 2.86 0.00 3.95
2964 4383 1.256376 CGAATGAATCTTCACGGCGAG 59.744 52.381 16.62 5.72 40.49 5.03
2988 4407 2.291670 GGACCAGAACCTCTCTACCTCA 60.292 54.545 0.00 0.00 31.12 3.86
2993 4412 3.544698 AACAGGACCAGAACCTCTCTA 57.455 47.619 0.00 0.00 35.35 2.43
3029 4448 2.158449 CACGTTCATGACTGCTTCTTCC 59.842 50.000 0.00 0.00 0.00 3.46
3030 4449 2.802816 ACACGTTCATGACTGCTTCTTC 59.197 45.455 0.00 0.00 0.00 2.87
3031 4450 2.838736 ACACGTTCATGACTGCTTCTT 58.161 42.857 0.00 0.00 0.00 2.52
3037 4456 6.062646 CGTTTTTAGTACACGTTCATGACTG 58.937 40.000 0.00 0.00 0.00 3.51
3065 4487 0.877071 CCGCATTAGCTATTGGCCTG 59.123 55.000 15.51 0.00 43.05 4.85
3066 4488 0.890996 GCCGCATTAGCTATTGGCCT 60.891 55.000 15.51 0.00 43.05 5.19
3075 4497 1.211818 CGACTCTCTGCCGCATTAGC 61.212 60.000 0.00 0.00 37.42 3.09
3082 4504 2.101965 CTCTGCGACTCTCTGCCG 59.898 66.667 0.00 0.00 0.00 5.69
3148 4571 6.120378 TCTGTACTAACTGACAGATTAGCG 57.880 41.667 10.08 4.37 45.49 4.26
3369 4810 0.546122 TGCGGATAGGCACAAAGGAT 59.454 50.000 0.00 0.00 38.17 3.24
3463 4915 1.282382 TTACGGGGAAGCTAAAGCCT 58.718 50.000 0.00 0.00 43.38 4.58
3480 4933 3.770933 AGTGGTAACTATGCGGTCCTTTA 59.229 43.478 0.00 0.00 33.79 1.85
3486 4939 2.169144 GGGTAAGTGGTAACTATGCGGT 59.831 50.000 0.00 0.00 34.77 5.68
3633 5090 0.464036 TGCAGGCACCCGATAACTAG 59.536 55.000 0.00 0.00 0.00 2.57
3650 5107 0.250640 CCTATCCCTCATGCAGGTGC 60.251 60.000 0.00 0.00 41.51 5.01
3651 5108 1.135094 ACCTATCCCTCATGCAGGTG 58.865 55.000 0.00 0.00 41.51 4.00
3662 5119 2.029623 TCGTTGCAGAGTACCTATCCC 58.970 52.381 0.00 0.00 0.00 3.85
3670 5129 0.109272 CGGAGCTTCGTTGCAGAGTA 60.109 55.000 6.14 0.00 34.99 2.59
3759 5232 1.525535 GACAGCAGCCAGGCCATAG 60.526 63.158 8.22 0.00 0.00 2.23
3770 5243 1.878522 GGCGGTATCACGACAGCAG 60.879 63.158 0.00 0.00 42.70 4.24
3793 5266 2.544480 TGTCAACAGCGACGAGATAG 57.456 50.000 0.00 0.00 38.84 2.08
3794 5267 3.503827 ATTGTCAACAGCGACGAGATA 57.496 42.857 0.00 0.00 38.84 1.98
3795 5268 2.370281 ATTGTCAACAGCGACGAGAT 57.630 45.000 0.00 0.00 38.84 2.75
3828 5302 2.451167 CGAGACGACGGCGACTACT 61.451 63.158 22.49 11.19 42.24 2.57
3909 5386 1.273688 TTGATGTCACGCGATAACCG 58.726 50.000 15.93 0.00 42.21 4.44
3999 6739 7.122138 AGATATGGCACGATCATTGATATCT 57.878 36.000 12.37 4.55 30.35 1.98
4029 7810 7.715249 ACATTTCGCATCCAGTATAATAACAGT 59.285 33.333 0.00 0.00 0.00 3.55
4060 7841 3.941483 CGGGTGCTCTTGATTAATTCACT 59.059 43.478 0.00 0.00 32.84 3.41
4061 7842 3.689649 ACGGGTGCTCTTGATTAATTCAC 59.310 43.478 0.00 0.00 32.84 3.18
4062 7843 3.689161 CACGGGTGCTCTTGATTAATTCA 59.311 43.478 0.00 0.00 0.00 2.57
4063 7844 3.065371 CCACGGGTGCTCTTGATTAATTC 59.935 47.826 0.00 0.00 0.00 2.17
4064 7845 3.016736 CCACGGGTGCTCTTGATTAATT 58.983 45.455 0.00 0.00 0.00 1.40
4065 7846 2.643551 CCACGGGTGCTCTTGATTAAT 58.356 47.619 0.00 0.00 0.00 1.40
4068 7849 1.002134 CCCACGGGTGCTCTTGATT 60.002 57.895 0.00 0.00 0.00 2.57
4069 7850 2.671070 CCCACGGGTGCTCTTGAT 59.329 61.111 0.00 0.00 0.00 2.57
4079 7860 2.733945 CAAAGCCAAACCCACGGG 59.266 61.111 0.00 0.00 42.03 5.28
4080 7861 2.028925 GCAAAGCCAAACCCACGG 59.971 61.111 0.00 0.00 0.00 4.94
4092 7873 0.868406 GAGGAACGTCACCTGCAAAG 59.132 55.000 17.05 0.00 37.93 2.77
4290 8794 3.691342 CCGGGTGCTCGAAGGTGA 61.691 66.667 0.00 0.00 0.00 4.02
4703 9207 1.954362 CTGCCCTTCTCCGACTCCAG 61.954 65.000 0.00 0.00 0.00 3.86
5009 9525 0.680921 CCGACATGCCAACTCCCAAT 60.681 55.000 0.00 0.00 0.00 3.16
5021 9537 2.506217 CACGACGGACCCGACATG 60.506 66.667 16.07 3.90 42.83 3.21
5024 9540 4.712425 CCACACGACGGACCCGAC 62.712 72.222 16.07 8.18 42.83 4.79
5028 9544 2.049433 CACTCCACACGACGGACC 60.049 66.667 0.00 0.00 0.00 4.46
5071 9598 0.951040 CAGCAACCTCGACACTTCCC 60.951 60.000 0.00 0.00 0.00 3.97
5123 9650 2.386661 AGTTAGCCCAGAATGTCACG 57.613 50.000 0.00 0.00 0.00 4.35
5192 9719 8.181904 TCTAGGATTGCAAATGAGTTCTTTTT 57.818 30.769 1.71 0.00 0.00 1.94
5218 9751 5.300539 TGCTCCTTTTGTGCACTTAAATGTA 59.699 36.000 19.41 8.35 0.00 2.29
5221 9754 4.935352 TGCTCCTTTTGTGCACTTAAAT 57.065 36.364 19.41 0.00 0.00 1.40
5222 9755 4.727507 TTGCTCCTTTTGTGCACTTAAA 57.272 36.364 19.41 16.25 36.37 1.52
5223 9756 4.619973 CATTGCTCCTTTTGTGCACTTAA 58.380 39.130 19.41 9.56 36.37 1.85
5224 9757 3.552684 GCATTGCTCCTTTTGTGCACTTA 60.553 43.478 19.41 3.02 36.37 2.24
5225 9758 2.804212 GCATTGCTCCTTTTGTGCACTT 60.804 45.455 19.41 0.00 36.37 3.16
5226 9759 1.269936 GCATTGCTCCTTTTGTGCACT 60.270 47.619 19.41 0.00 36.37 4.40
5227 9760 1.142474 GCATTGCTCCTTTTGTGCAC 58.858 50.000 10.75 10.75 36.37 4.57
5259 9802 4.514781 ACTCATACGTGTAGCACTTCAA 57.485 40.909 0.00 0.00 31.34 2.69
5260 9803 4.095932 CCTACTCATACGTGTAGCACTTCA 59.904 45.833 0.00 0.00 37.72 3.02
5394 9983 3.752665 AGTAGAGAGTGAAACGAGACCA 58.247 45.455 0.00 0.00 45.86 4.02
5438 10027 5.447778 ACATCAAACATGAGAAGGGAGAT 57.552 39.130 0.00 0.00 0.00 2.75
5548 10137 8.337532 GGTTTTTGAATTTCACTCAAGGAAATG 58.662 33.333 0.00 0.00 42.48 2.32
5573 10162 1.888512 CTGGACTTCAAATGTGGTGGG 59.111 52.381 0.00 0.00 0.00 4.61
5648 10237 9.912634 CCATGTGTGTTTATTGAGAAAATTAGT 57.087 29.630 0.00 0.00 0.00 2.24
5669 10258 2.577606 TCGTCCCAAATTGACCATGT 57.422 45.000 0.00 0.00 0.00 3.21
5670 10259 4.454728 AATTCGTCCCAAATTGACCATG 57.545 40.909 0.00 0.00 0.00 3.66
5715 10304 0.401738 ATGTGGACCTGAACAGTGGG 59.598 55.000 0.00 0.00 0.00 4.61
5721 10310 0.250901 AGTGCCATGTGGACCTGAAC 60.251 55.000 2.55 0.00 37.39 3.18
5725 10314 2.621407 CCATTTAGTGCCATGTGGACCT 60.621 50.000 2.55 0.00 37.39 3.85
5747 10336 2.836262 ACGGTCAACAAACGGTATTGA 58.164 42.857 5.09 0.87 34.38 2.57
5751 10340 3.129871 CCTTAACGGTCAACAAACGGTA 58.870 45.455 0.00 0.00 32.99 4.02
5772 10361 2.035783 GGTGGGCCCTCCTTTCAC 59.964 66.667 31.98 16.09 36.20 3.18
5792 10381 7.222872 AGAAAGTTTGAGAGAGATGACAATGT 58.777 34.615 0.00 0.00 0.00 2.71
5813 10405 1.372501 CCCCCAAGGAGGAGAAGAAA 58.627 55.000 0.00 0.00 41.22 2.52
5821 10413 2.166957 TTGGAATGCCCCCAAGGAGG 62.167 60.000 0.00 0.00 38.64 4.30
5903 10495 1.293498 CTCCTACTGTTGCCAGCGT 59.707 57.895 0.00 0.00 42.81 5.07
5938 10530 3.432051 CTAGCCAGGGAAGACCGCG 62.432 68.421 0.00 0.00 46.96 6.46
5939 10531 2.022240 CTCTAGCCAGGGAAGACCGC 62.022 65.000 0.00 0.00 46.96 5.68
5940 10532 0.395862 TCTCTAGCCAGGGAAGACCG 60.396 60.000 0.00 0.00 46.96 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.