Multiple sequence alignment - TraesCS5B01G220700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G220700 chr5B 100.000 3896 0 0 1 3896 394985063 394981168 0.000000e+00 7195
1 TraesCS5B01G220700 chr5A 89.900 2792 124 51 319 2973 438156770 438154000 0.000000e+00 3448
2 TraesCS5B01G220700 chr5A 89.342 319 15 6 3227 3544 438153295 438152995 2.200000e-102 383
3 TraesCS5B01G220700 chr5A 88.542 192 11 5 2991 3182 438153957 438153777 5.070000e-54 222
4 TraesCS5B01G220700 chr5D 92.733 2064 95 20 1162 3182 336777895 336775844 0.000000e+00 2929
5 TraesCS5B01G220700 chr5D 89.497 457 10 16 319 748 336780896 336780451 9.520000e-151 544
6 TraesCS5B01G220700 chr5D 91.089 404 19 11 746 1138 336778268 336777871 7.410000e-147 531
7 TraesCS5B01G220700 chr5D 86.553 409 29 11 3227 3632 336775764 336775379 1.000000e-115 427
8 TraesCS5B01G220700 chr5D 90.521 211 14 4 1 206 336781180 336780971 1.380000e-69 274
9 TraesCS5B01G220700 chr3A 91.463 328 19 3 1592 1913 695949812 695950136 3.570000e-120 442
10 TraesCS5B01G220700 chr7A 90.244 328 23 3 1592 1913 660037773 660037449 1.670000e-113 420
11 TraesCS5B01G220700 chr6A 86.335 322 31 9 1592 1913 420599153 420599461 4.820000e-89 339


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G220700 chr5B 394981168 394985063 3895 True 7195 7195 100.000000 1 3896 1 chr5B.!!$R1 3895
1 TraesCS5B01G220700 chr5A 438152995 438156770 3775 True 1351 3448 89.261333 319 3544 3 chr5A.!!$R1 3225
2 TraesCS5B01G220700 chr5D 336775379 336781180 5801 True 941 2929 90.078600 1 3632 5 chr5D.!!$R1 3631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
95 96 0.108377 TTGCGGAGAGAAGCGCAATA 60.108 50.0 11.47 0.00 41.48 1.90 F
301 306 0.173708 AAGATCTGGCTCGACGAACC 59.826 55.0 10.41 10.41 0.00 3.62 F
583 626 0.180171 CGGGCAGAGAGAGAGAGAGA 59.820 60.0 0.00 0.00 0.00 3.10 F
881 3155 0.695347 CCTCCCTTCCTTGCTCACTT 59.305 55.0 0.00 0.00 0.00 3.16 F
2447 4784 0.391263 GTCAACCTGACCGGGATCAC 60.391 60.0 6.32 0.00 41.37 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1425 3753 1.069973 CAAAAGCTCGTGCGATTCACA 60.070 47.619 3.48 0.0 45.92 3.58 R
2262 4599 1.675641 GCCGAACTGCTCCATGGTT 60.676 57.895 12.58 0.0 0.00 3.67 R
2364 4701 1.153628 CACGATCGGGGTGGAGTTC 60.154 63.158 20.98 0.0 0.00 3.01 R
2852 5195 1.227002 GCGAACCCGATCTGAGACC 60.227 63.158 0.00 0.0 38.22 3.85 R
3642 6461 0.179174 GCGGCACTTATTTTGGGTCG 60.179 55.000 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 0.741221 GTGGGTGCCTCGATCACTTC 60.741 60.000 14.85 9.77 34.97 3.01
58 59 0.462581 TGCCTCGATCACTTCCATGC 60.463 55.000 0.00 0.00 0.00 4.06
69 70 1.602237 TTCCATGCGGAAGGACTCC 59.398 57.895 0.00 0.00 46.79 3.85
88 89 3.861840 TCCAATTACTTGCGGAGAGAAG 58.138 45.455 0.00 0.00 0.00 2.85
95 96 0.108377 TTGCGGAGAGAAGCGCAATA 60.108 50.000 11.47 0.00 41.48 1.90
108 109 3.201290 AGCGCAATAAATCTGTCAGAGG 58.799 45.455 11.47 0.00 0.00 3.69
117 118 2.975732 TCTGTCAGAGGCTAGCAATG 57.024 50.000 18.24 11.61 0.00 2.82
145 146 5.163152 ACATCTCCAGGACAAAAAGAAGAGT 60.163 40.000 0.00 0.00 0.00 3.24
147 148 3.728845 TCCAGGACAAAAAGAAGAGTCG 58.271 45.455 0.00 0.00 31.93 4.18
153 154 0.605589 AAAAAGAAGAGTCGGGCGGG 60.606 55.000 0.00 0.00 0.00 6.13
154 155 3.607370 AAAGAAGAGTCGGGCGGGC 62.607 63.158 0.00 0.00 0.00 6.13
156 157 4.388499 GAAGAGTCGGGCGGGCAA 62.388 66.667 3.27 0.00 0.00 4.52
157 158 4.394712 AAGAGTCGGGCGGGCAAG 62.395 66.667 3.27 0.00 0.00 4.01
182 187 2.594592 GGCTGCACCACGGTTCTT 60.595 61.111 0.50 0.00 38.86 2.52
193 198 3.879912 CGGTTCTTGTCCGTACACT 57.120 52.632 0.00 0.00 42.62 3.55
206 211 2.649331 GTACACTGCACTGTACGGAT 57.351 50.000 17.30 0.00 37.76 4.18
208 213 1.257743 ACACTGCACTGTACGGATCT 58.742 50.000 9.17 0.00 0.00 2.75
209 214 1.202582 ACACTGCACTGTACGGATCTC 59.797 52.381 9.17 0.00 0.00 2.75
210 215 0.452184 ACTGCACTGTACGGATCTCG 59.548 55.000 9.17 0.00 45.88 4.04
211 216 0.248661 CTGCACTGTACGGATCTCGG 60.249 60.000 9.17 0.00 44.45 4.63
213 218 0.454600 GCACTGTACGGATCTCGGAA 59.545 55.000 9.17 0.00 44.45 4.30
214 219 1.067212 GCACTGTACGGATCTCGGAAT 59.933 52.381 9.17 0.00 44.45 3.01
215 220 2.292569 GCACTGTACGGATCTCGGAATA 59.707 50.000 9.17 0.00 44.45 1.75
216 221 3.609644 GCACTGTACGGATCTCGGAATAG 60.610 52.174 9.17 4.82 44.45 1.73
217 222 3.813724 CACTGTACGGATCTCGGAATAGA 59.186 47.826 9.17 0.00 44.45 1.98
218 223 4.066490 ACTGTACGGATCTCGGAATAGAG 58.934 47.826 9.17 3.27 44.45 2.43
220 225 5.219343 TGTACGGATCTCGGAATAGAGTA 57.781 43.478 8.20 0.00 44.45 2.59
221 226 5.236282 TGTACGGATCTCGGAATAGAGTAG 58.764 45.833 8.20 0.00 44.45 2.57
222 227 4.354893 ACGGATCTCGGAATAGAGTAGT 57.645 45.455 8.20 0.00 44.45 2.73
223 228 5.480642 ACGGATCTCGGAATAGAGTAGTA 57.519 43.478 8.20 0.00 44.45 1.82
224 229 6.052405 ACGGATCTCGGAATAGAGTAGTAT 57.948 41.667 8.20 0.00 44.45 2.12
225 230 7.180322 ACGGATCTCGGAATAGAGTAGTATA 57.820 40.000 8.20 0.00 44.45 1.47
226 231 7.619050 ACGGATCTCGGAATAGAGTAGTATAA 58.381 38.462 8.20 0.00 44.45 0.98
227 232 8.266473 ACGGATCTCGGAATAGAGTAGTATAAT 58.734 37.037 8.20 0.00 44.45 1.28
228 233 8.767085 CGGATCTCGGAATAGAGTAGTATAATC 58.233 40.741 0.00 0.00 39.21 1.75
233 238 9.976255 CTCGGAATAGAGTAGTATAATCTTTCG 57.024 37.037 0.00 0.00 44.65 3.46
234 239 8.449397 TCGGAATAGAGTAGTATAATCTTTCGC 58.551 37.037 0.00 0.00 44.65 4.70
235 240 8.452534 CGGAATAGAGTAGTATAATCTTTCGCT 58.547 37.037 0.00 0.00 44.65 4.93
236 241 9.777575 GGAATAGAGTAGTATAATCTTTCGCTC 57.222 37.037 0.00 0.00 44.65 5.03
248 253 2.758979 TCTTTCGCTCCGATCTTTACCT 59.241 45.455 0.00 0.00 35.23 3.08
253 258 5.075858 TCGCTCCGATCTTTACCTTTTTA 57.924 39.130 0.00 0.00 0.00 1.52
257 262 5.742063 CTCCGATCTTTACCTTTTTACCCT 58.258 41.667 0.00 0.00 0.00 4.34
258 263 6.130692 TCCGATCTTTACCTTTTTACCCTT 57.869 37.500 0.00 0.00 0.00 3.95
260 265 5.124936 CCGATCTTTACCTTTTTACCCTTGG 59.875 44.000 0.00 0.00 0.00 3.61
261 266 5.708697 CGATCTTTACCTTTTTACCCTTGGT 59.291 40.000 0.00 0.00 40.16 3.67
262 267 6.208007 CGATCTTTACCTTTTTACCCTTGGTT 59.792 38.462 0.00 0.00 37.09 3.67
263 268 7.255695 CGATCTTTACCTTTTTACCCTTGGTTT 60.256 37.037 0.00 0.00 37.09 3.27
264 269 7.114866 TCTTTACCTTTTTACCCTTGGTTTG 57.885 36.000 0.00 0.00 37.09 2.93
265 270 6.896307 TCTTTACCTTTTTACCCTTGGTTTGA 59.104 34.615 0.00 0.00 37.09 2.69
266 271 6.718522 TTACCTTTTTACCCTTGGTTTGAG 57.281 37.500 0.00 0.00 37.09 3.02
267 272 3.386726 ACCTTTTTACCCTTGGTTTGAGC 59.613 43.478 0.00 0.00 37.09 4.26
268 273 3.244078 CCTTTTTACCCTTGGTTTGAGCC 60.244 47.826 0.00 0.00 37.09 4.70
269 274 1.611519 TTTACCCTTGGTTTGAGCCG 58.388 50.000 0.00 0.00 37.09 5.52
270 275 0.475044 TTACCCTTGGTTTGAGCCGT 59.525 50.000 0.00 0.00 37.09 5.68
271 276 0.250553 TACCCTTGGTTTGAGCCGTG 60.251 55.000 0.00 0.00 37.09 4.94
272 277 2.644992 CCTTGGTTTGAGCCGTGC 59.355 61.111 0.00 0.00 0.00 5.34
295 300 0.610174 AAGTGCAAGATCTGGCTCGA 59.390 50.000 22.64 0.00 0.00 4.04
299 304 0.458543 GCAAGATCTGGCTCGACGAA 60.459 55.000 15.31 0.00 0.00 3.85
300 305 1.272781 CAAGATCTGGCTCGACGAAC 58.727 55.000 0.00 0.00 0.00 3.95
301 306 0.173708 AAGATCTGGCTCGACGAACC 59.826 55.000 10.41 10.41 0.00 3.62
302 307 1.586564 GATCTGGCTCGACGAACCG 60.587 63.158 12.39 7.61 0.00 4.44
303 308 3.701604 ATCTGGCTCGACGAACCGC 62.702 63.158 12.39 5.95 0.00 5.68
304 309 4.717629 CTGGCTCGACGAACCGCA 62.718 66.667 12.39 0.00 0.00 5.69
305 310 4.287781 TGGCTCGACGAACCGCAA 62.288 61.111 12.39 0.00 0.00 4.85
306 311 3.039588 GGCTCGACGAACCGCAAA 61.040 61.111 0.75 0.00 0.00 3.68
307 312 2.170273 GCTCGACGAACCGCAAAC 59.830 61.111 0.00 0.00 0.00 2.93
308 313 2.464189 CTCGACGAACCGCAAACG 59.536 61.111 0.00 0.00 39.67 3.60
377 383 4.875713 AGCTTAATGGCGGCCGGG 62.876 66.667 29.38 0.00 37.29 5.73
400 414 2.223089 GCCCATTTTCAATTCAATGCGC 60.223 45.455 0.00 0.00 29.53 6.09
498 532 2.423446 GCTGCCACTCCTATCCGG 59.577 66.667 0.00 0.00 0.00 5.14
546 586 1.081175 TGAGCGAGTGAGTGAAGCG 60.081 57.895 0.00 0.00 0.00 4.68
583 626 0.180171 CGGGCAGAGAGAGAGAGAGA 59.820 60.000 0.00 0.00 0.00 3.10
660 724 0.968393 AGAGGAGGAAGAGGACACGC 60.968 60.000 0.00 0.00 0.00 5.34
696 760 0.817634 CCAATAATTCCTCGCCCGCA 60.818 55.000 0.00 0.00 0.00 5.69
809 3079 1.903404 CCTGCACCCTTGTTCCCAC 60.903 63.158 0.00 0.00 0.00 4.61
874 3148 4.522114 GAGAATCTTTCCTCCCTTCCTTG 58.478 47.826 0.00 0.00 0.00 3.61
881 3155 0.695347 CCTCCCTTCCTTGCTCACTT 59.305 55.000 0.00 0.00 0.00 3.16
965 3247 1.342074 CTGACAGGGGAGTGAGTGAA 58.658 55.000 0.00 0.00 0.00 3.18
966 3248 1.274728 CTGACAGGGGAGTGAGTGAAG 59.725 57.143 0.00 0.00 0.00 3.02
973 3255 1.001406 GGGAGTGAGTGAAGTGAGGTG 59.999 57.143 0.00 0.00 0.00 4.00
974 3256 1.964223 GGAGTGAGTGAAGTGAGGTGA 59.036 52.381 0.00 0.00 0.00 4.02
975 3257 2.029470 GGAGTGAGTGAAGTGAGGTGAG 60.029 54.545 0.00 0.00 0.00 3.51
976 3258 1.967066 AGTGAGTGAAGTGAGGTGAGG 59.033 52.381 0.00 0.00 0.00 3.86
977 3259 1.689273 GTGAGTGAAGTGAGGTGAGGT 59.311 52.381 0.00 0.00 0.00 3.85
1022 3304 4.680537 ACGGGGAGGAGCTCACGT 62.681 66.667 17.19 13.97 39.44 4.49
1053 3335 2.820479 GCTCTGCTGCTCCTGCTG 60.820 66.667 0.00 0.00 40.48 4.41
1114 3396 4.499183 GTCAAGTGAGTTCCTCGATTCAT 58.501 43.478 0.00 0.00 32.35 2.57
1232 3518 2.280628 GATGATGTTTCCGGGTGAGAC 58.719 52.381 0.00 0.00 0.00 3.36
1241 3527 2.115911 CGGGTGAGACGAGAGAGGG 61.116 68.421 0.00 0.00 0.00 4.30
1243 3529 2.419739 GGTGAGACGAGAGAGGGCC 61.420 68.421 0.00 0.00 0.00 5.80
1246 3532 1.077357 GAGACGAGAGAGGGCCAGA 60.077 63.158 6.18 0.00 0.00 3.86
1282 3569 9.627123 TTATAATGGTTTTGGGAGTAGATTCTG 57.373 33.333 0.00 0.00 0.00 3.02
1286 3573 6.133356 TGGTTTTGGGAGTAGATTCTGTTTT 58.867 36.000 0.00 0.00 0.00 2.43
1324 3626 1.408702 GTGACAGTGTGCCCACATTTT 59.591 47.619 0.00 0.00 44.39 1.82
1404 3732 3.056607 CGCTGGAAGAACCCATCAATTTT 60.057 43.478 0.00 0.00 38.00 1.82
1407 3735 4.640364 TGGAAGAACCCATCAATTTTTGC 58.360 39.130 0.00 0.00 38.00 3.68
1417 3745 4.377635 CCATCAATTTTTGCGCCAAGAAAG 60.378 41.667 4.18 0.00 0.00 2.62
1550 3878 1.202521 CGCAGTACATGACCAGCCATA 60.203 52.381 0.00 0.00 0.00 2.74
1551 3879 2.548707 CGCAGTACATGACCAGCCATAT 60.549 50.000 0.00 0.00 0.00 1.78
1571 3899 7.553402 GCCATATAATTCTGAGCTCATTCATCT 59.447 37.037 18.63 4.12 0.00 2.90
1572 3900 9.451002 CCATATAATTCTGAGCTCATTCATCTT 57.549 33.333 18.63 7.91 0.00 2.40
1803 4137 4.704833 TCCAAGCTGGCGCAGGTC 62.705 66.667 10.83 0.00 41.59 3.85
1852 4186 1.287815 CTCAACTACGTCGCCACCA 59.712 57.895 0.00 0.00 0.00 4.17
2253 4590 4.567385 CGGAGCCAGCTCTCGCTC 62.567 72.222 18.54 15.53 45.15 5.03
2262 4599 1.342496 CAGCTCTCGCTCATATCCCAA 59.658 52.381 0.00 0.00 45.15 4.12
2267 4604 2.705658 TCTCGCTCATATCCCAAACCAT 59.294 45.455 0.00 0.00 0.00 3.55
2447 4784 0.391263 GTCAACCTGACCGGGATCAC 60.391 60.000 6.32 0.00 41.37 3.06
2580 4923 4.821589 CGGGCCGAGTTCCTGAGC 62.822 72.222 24.41 0.00 31.56 4.26
2763 5106 3.009115 GCCTCCCAGGTGTGCCTA 61.009 66.667 0.00 0.00 44.97 3.93
2766 5109 3.376935 CTCCCAGGTGTGCCTAGCG 62.377 68.421 0.00 0.00 44.97 4.26
2830 5173 2.609747 ACTACCAGCAGAAGAACCTGA 58.390 47.619 0.00 0.00 36.29 3.86
2838 5181 2.290577 GCAGAAGAACCTGAGGGTGATT 60.291 50.000 2.38 0.00 46.67 2.57
2852 5195 2.030401 TGATTTTCGACACCGCGGG 61.030 57.895 31.76 20.69 35.37 6.13
2874 5217 2.813474 CAGATCGGGTTCGCGCAA 60.813 61.111 8.75 0.00 36.13 4.85
2909 5252 6.582677 TTACATTTGATTTGACCGTGGATT 57.417 33.333 0.00 0.00 0.00 3.01
2910 5253 4.808558 ACATTTGATTTGACCGTGGATTG 58.191 39.130 0.00 0.00 0.00 2.67
2911 5254 3.932545 TTTGATTTGACCGTGGATTGG 57.067 42.857 0.00 0.00 0.00 3.16
2912 5255 2.869101 TGATTTGACCGTGGATTGGA 57.131 45.000 0.00 0.00 0.00 3.53
2913 5256 3.147553 TGATTTGACCGTGGATTGGAA 57.852 42.857 0.00 0.00 0.00 3.53
2914 5257 3.696045 TGATTTGACCGTGGATTGGAAT 58.304 40.909 0.00 0.00 0.00 3.01
2915 5258 3.694072 TGATTTGACCGTGGATTGGAATC 59.306 43.478 0.00 0.00 34.66 2.52
2916 5259 3.433306 TTTGACCGTGGATTGGAATCT 57.567 42.857 0.00 0.00 35.73 2.40
2917 5260 2.691409 TGACCGTGGATTGGAATCTC 57.309 50.000 0.00 0.00 35.73 2.75
2918 5261 2.187958 TGACCGTGGATTGGAATCTCT 58.812 47.619 0.00 0.00 35.73 3.10
2922 5265 2.169352 CCGTGGATTGGAATCTCTCTGT 59.831 50.000 0.00 0.00 35.73 3.41
2930 5273 2.965147 TGGAATCTCTCTGTGTGTGTGA 59.035 45.455 0.00 0.00 0.00 3.58
2956 5303 7.344612 AGTGTGTGTGAATATCCTATAGTTGGA 59.655 37.037 0.00 0.00 38.06 3.53
2978 5325 3.627577 AGATTTGTTTTGGGATCGATCGG 59.372 43.478 18.81 0.00 0.00 4.18
3043 5415 2.817538 ATTGGCAAATGTACGTACGC 57.182 45.000 20.18 16.31 0.00 4.42
3077 5453 6.522054 TGTAGTAGTTGCTCTAGCTTGTTTT 58.478 36.000 3.26 0.00 42.66 2.43
3078 5454 6.990349 TGTAGTAGTTGCTCTAGCTTGTTTTT 59.010 34.615 3.26 0.00 42.66 1.94
3079 5455 6.546972 AGTAGTTGCTCTAGCTTGTTTTTC 57.453 37.500 3.26 0.00 42.66 2.29
3116 5495 8.477256 TCTTCTTTCATTTCTTTGTGGTTTGAT 58.523 29.630 0.00 0.00 0.00 2.57
3117 5496 8.422973 TTCTTTCATTTCTTTGTGGTTTGATG 57.577 30.769 0.00 0.00 0.00 3.07
3118 5497 7.780064 TCTTTCATTTCTTTGTGGTTTGATGA 58.220 30.769 0.00 0.00 0.00 2.92
3168 5547 0.689623 GGTGCTGATAGGGGAGATGG 59.310 60.000 0.00 0.00 0.00 3.51
3182 5561 3.420893 GGAGATGGTTGTGGAATTGTCA 58.579 45.455 0.00 0.00 0.00 3.58
3183 5562 3.826157 GGAGATGGTTGTGGAATTGTCAA 59.174 43.478 0.00 0.00 0.00 3.18
3184 5563 4.280677 GGAGATGGTTGTGGAATTGTCAAA 59.719 41.667 0.00 0.00 0.00 2.69
3185 5564 5.458041 AGATGGTTGTGGAATTGTCAAAG 57.542 39.130 0.00 0.00 0.00 2.77
3186 5565 4.895297 AGATGGTTGTGGAATTGTCAAAGT 59.105 37.500 0.00 0.00 0.00 2.66
3187 5566 5.363580 AGATGGTTGTGGAATTGTCAAAGTT 59.636 36.000 0.00 0.00 0.00 2.66
3188 5567 6.549364 AGATGGTTGTGGAATTGTCAAAGTTA 59.451 34.615 0.00 0.00 0.00 2.24
3189 5568 6.531503 TGGTTGTGGAATTGTCAAAGTTAA 57.468 33.333 0.00 0.00 0.00 2.01
3190 5569 7.118496 TGGTTGTGGAATTGTCAAAGTTAAT 57.882 32.000 0.00 0.00 0.00 1.40
3193 5572 6.339587 TGTGGAATTGTCAAAGTTAATCCC 57.660 37.500 0.00 0.00 0.00 3.85
3194 5573 5.835819 TGTGGAATTGTCAAAGTTAATCCCA 59.164 36.000 0.00 0.00 0.00 4.37
3195 5574 6.496565 TGTGGAATTGTCAAAGTTAATCCCAT 59.503 34.615 0.00 0.00 0.00 4.00
3196 5575 7.035612 GTGGAATTGTCAAAGTTAATCCCATC 58.964 38.462 0.00 0.00 0.00 3.51
3197 5576 6.127758 TGGAATTGTCAAAGTTAATCCCATCG 60.128 38.462 0.00 0.00 0.00 3.84
3198 5577 4.695217 TTGTCAAAGTTAATCCCATCGC 57.305 40.909 0.00 0.00 0.00 4.58
3200 5579 3.938963 TGTCAAAGTTAATCCCATCGCTC 59.061 43.478 0.00 0.00 0.00 5.03
3201 5580 4.192317 GTCAAAGTTAATCCCATCGCTCT 58.808 43.478 0.00 0.00 0.00 4.09
3202 5581 4.034510 GTCAAAGTTAATCCCATCGCTCTG 59.965 45.833 0.00 0.00 0.00 3.35
3203 5582 3.914426 AAGTTAATCCCATCGCTCTGT 57.086 42.857 0.00 0.00 0.00 3.41
3204 5583 3.185246 AGTTAATCCCATCGCTCTGTG 57.815 47.619 0.00 0.00 0.00 3.66
3205 5584 1.599542 GTTAATCCCATCGCTCTGTGC 59.400 52.381 0.00 0.00 38.57 4.57
3206 5585 1.123077 TAATCCCATCGCTCTGTGCT 58.877 50.000 0.00 0.00 40.11 4.40
3207 5586 0.179062 AATCCCATCGCTCTGTGCTC 60.179 55.000 0.00 0.00 40.11 4.26
3208 5587 1.047596 ATCCCATCGCTCTGTGCTCT 61.048 55.000 0.00 0.00 40.11 4.09
3210 5589 0.678395 CCCATCGCTCTGTGCTCTAT 59.322 55.000 0.00 0.00 40.11 1.98
3211 5590 1.069823 CCCATCGCTCTGTGCTCTATT 59.930 52.381 0.00 0.00 40.11 1.73
3213 5592 1.526041 CATCGCTCTGTGCTCTATTGC 59.474 52.381 0.00 0.00 40.11 3.56
3214 5593 0.179100 TCGCTCTGTGCTCTATTGCC 60.179 55.000 0.00 0.00 40.11 4.52
3215 5594 1.485838 CGCTCTGTGCTCTATTGCCG 61.486 60.000 0.00 0.00 40.11 5.69
3216 5595 1.156645 GCTCTGTGCTCTATTGCCGG 61.157 60.000 0.00 0.00 38.95 6.13
3217 5596 1.153369 TCTGTGCTCTATTGCCGGC 60.153 57.895 22.73 22.73 0.00 6.13
3218 5597 1.450134 CTGTGCTCTATTGCCGGCA 60.450 57.895 29.03 29.03 0.00 5.69
3219 5598 1.002746 TGTGCTCTATTGCCGGCAA 60.003 52.632 41.54 41.54 40.47 4.52
3220 5599 1.026182 TGTGCTCTATTGCCGGCAAG 61.026 55.000 41.38 31.06 39.47 4.01
3221 5600 0.744414 GTGCTCTATTGCCGGCAAGA 60.744 55.000 41.38 37.06 39.47 3.02
3222 5601 0.035534 TGCTCTATTGCCGGCAAGAA 60.036 50.000 41.38 31.06 39.47 2.52
3224 5603 1.472480 GCTCTATTGCCGGCAAGAAAA 59.528 47.619 41.38 27.63 39.47 2.29
3258 6075 1.372872 CACGTGACGGATGCAGTGA 60.373 57.895 10.90 0.00 0.00 3.41
3284 6101 6.240894 AGAACATTTTTCATGTAGCTGAGGA 58.759 36.000 0.00 0.00 0.00 3.71
3286 6103 6.259550 ACATTTTTCATGTAGCTGAGGAAC 57.740 37.500 0.00 0.00 0.00 3.62
3326 6143 0.975556 TCAGGGCGTGCCTATTCTGA 60.976 55.000 11.25 11.62 36.10 3.27
3359 6176 1.111116 ATAAAGGCGCCTGCATGCAT 61.111 50.000 33.60 9.77 45.35 3.96
3397 6214 7.663081 GGCAGGAAACATCATTCAGAGAATATA 59.337 37.037 0.00 0.00 0.00 0.86
3467 6284 8.887036 AATAACAGAAACAAACAAATCCTTCC 57.113 30.769 0.00 0.00 0.00 3.46
3468 6285 6.544928 AACAGAAACAAACAAATCCTTCCT 57.455 33.333 0.00 0.00 0.00 3.36
3469 6286 6.149129 ACAGAAACAAACAAATCCTTCCTC 57.851 37.500 0.00 0.00 0.00 3.71
3479 6296 5.953571 ACAAATCCTTCCTCTAAACCAAGT 58.046 37.500 0.00 0.00 0.00 3.16
3483 6300 3.008049 TCCTTCCTCTAAACCAAGTGCTC 59.992 47.826 0.00 0.00 0.00 4.26
3527 6344 3.676291 TTTATGCAGGAAAACAAGGGC 57.324 42.857 0.00 0.00 0.00 5.19
3528 6345 2.300956 TATGCAGGAAAACAAGGGCA 57.699 45.000 0.00 0.00 35.54 5.36
3529 6346 1.648116 ATGCAGGAAAACAAGGGCAT 58.352 45.000 0.00 0.00 37.17 4.40
3530 6347 1.422531 TGCAGGAAAACAAGGGCATT 58.577 45.000 0.00 0.00 0.00 3.56
3531 6348 1.344114 TGCAGGAAAACAAGGGCATTC 59.656 47.619 0.00 0.00 0.00 2.67
3532 6349 1.344114 GCAGGAAAACAAGGGCATTCA 59.656 47.619 0.00 0.00 0.00 2.57
3533 6350 2.867647 GCAGGAAAACAAGGGCATTCAC 60.868 50.000 0.00 0.00 0.00 3.18
3536 6353 3.161866 GGAAAACAAGGGCATTCACCTA 58.838 45.455 0.00 0.00 37.35 3.08
3564 6381 5.622770 AAACGAGTGCATTTACCCTAAAG 57.377 39.130 0.00 0.00 0.00 1.85
3566 6383 4.901868 ACGAGTGCATTTACCCTAAAGAA 58.098 39.130 0.00 0.00 0.00 2.52
3579 6396 5.310451 ACCCTAAAGAAAAACGAGTGCATA 58.690 37.500 0.00 0.00 0.00 3.14
3583 6400 7.484959 CCCTAAAGAAAAACGAGTGCATATTTC 59.515 37.037 0.00 0.00 0.00 2.17
3584 6401 8.237267 CCTAAAGAAAAACGAGTGCATATTTCT 58.763 33.333 0.00 0.00 38.40 2.52
3587 6404 8.507470 AAGAAAAACGAGTGCATATTTCTTTC 57.493 30.769 13.47 9.24 41.68 2.62
3589 6406 8.352942 AGAAAAACGAGTGCATATTTCTTTCTT 58.647 29.630 0.00 0.00 34.44 2.52
3619 6438 8.487313 TCAACATAATACAAGTGTATTTCGCT 57.513 30.769 19.02 0.93 45.90 4.93
3632 6451 1.310904 TTTCGCTTGGCCGTAAGTTT 58.689 45.000 0.00 0.00 0.00 2.66
3633 6452 1.310904 TTCGCTTGGCCGTAAGTTTT 58.689 45.000 0.00 0.00 0.00 2.43
3634 6453 2.166821 TCGCTTGGCCGTAAGTTTTA 57.833 45.000 0.00 0.00 0.00 1.52
3635 6454 1.799994 TCGCTTGGCCGTAAGTTTTAC 59.200 47.619 0.00 0.00 0.00 2.01
3636 6455 1.802365 CGCTTGGCCGTAAGTTTTACT 59.198 47.619 0.00 0.00 0.00 2.24
3637 6456 2.159747 CGCTTGGCCGTAAGTTTTACTC 60.160 50.000 0.00 0.00 0.00 2.59
3638 6457 2.161012 GCTTGGCCGTAAGTTTTACTCC 59.839 50.000 0.00 0.60 0.00 3.85
3639 6458 2.477845 TGGCCGTAAGTTTTACTCCC 57.522 50.000 0.00 0.00 0.00 4.30
3640 6459 1.980036 TGGCCGTAAGTTTTACTCCCT 59.020 47.619 0.00 0.00 0.00 4.20
3641 6460 2.027837 TGGCCGTAAGTTTTACTCCCTC 60.028 50.000 0.00 0.00 0.00 4.30
3642 6461 2.625737 GCCGTAAGTTTTACTCCCTCC 58.374 52.381 0.00 0.00 0.00 4.30
3643 6462 2.884827 CCGTAAGTTTTACTCCCTCCG 58.115 52.381 0.00 0.00 0.00 4.63
3644 6463 2.493278 CCGTAAGTTTTACTCCCTCCGA 59.507 50.000 0.00 0.00 0.00 4.55
3645 6464 3.505836 CGTAAGTTTTACTCCCTCCGAC 58.494 50.000 0.00 0.00 0.00 4.79
3646 6465 3.674410 CGTAAGTTTTACTCCCTCCGACC 60.674 52.174 0.00 0.00 0.00 4.79
3647 6466 1.273759 AGTTTTACTCCCTCCGACCC 58.726 55.000 0.00 0.00 0.00 4.46
3648 6467 0.978907 GTTTTACTCCCTCCGACCCA 59.021 55.000 0.00 0.00 0.00 4.51
3649 6468 1.348696 GTTTTACTCCCTCCGACCCAA 59.651 52.381 0.00 0.00 0.00 4.12
3650 6469 1.732117 TTTACTCCCTCCGACCCAAA 58.268 50.000 0.00 0.00 0.00 3.28
3651 6470 1.732117 TTACTCCCTCCGACCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
3652 6471 1.961133 TACTCCCTCCGACCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3653 6472 1.961133 ACTCCCTCCGACCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3654 6473 2.271777 ACTCCCTCCGACCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3655 6474 2.238898 ACTCCCTCCGACCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3656 6475 2.238898 CTCCCTCCGACCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3657 6476 2.026636 TCCCTCCGACCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3658 6477 1.743394 CCTCCGACCCAAAATAAGTGC 59.257 52.381 0.00 0.00 0.00 4.40
3659 6478 1.743394 CTCCGACCCAAAATAAGTGCC 59.257 52.381 0.00 0.00 0.00 5.01
3660 6479 0.450184 CCGACCCAAAATAAGTGCCG 59.550 55.000 0.00 0.00 0.00 5.69
3661 6480 0.179174 CGACCCAAAATAAGTGCCGC 60.179 55.000 0.00 0.00 0.00 6.53
3662 6481 1.173913 GACCCAAAATAAGTGCCGCT 58.826 50.000 0.00 0.00 0.00 5.52
3663 6482 0.887933 ACCCAAAATAAGTGCCGCTG 59.112 50.000 0.00 0.00 0.00 5.18
3664 6483 1.173043 CCCAAAATAAGTGCCGCTGA 58.827 50.000 0.00 0.00 0.00 4.26
3665 6484 1.750778 CCCAAAATAAGTGCCGCTGAT 59.249 47.619 0.00 0.00 0.00 2.90
3666 6485 2.166254 CCCAAAATAAGTGCCGCTGATT 59.834 45.455 0.00 0.00 29.37 2.57
3667 6486 3.368323 CCCAAAATAAGTGCCGCTGATTT 60.368 43.478 0.00 0.00 39.41 2.17
3668 6487 4.142271 CCCAAAATAAGTGCCGCTGATTTA 60.142 41.667 0.99 0.00 37.29 1.40
3669 6488 5.036737 CCAAAATAAGTGCCGCTGATTTAG 58.963 41.667 0.99 0.00 37.29 1.85
3670 6489 5.393027 CCAAAATAAGTGCCGCTGATTTAGT 60.393 40.000 0.99 0.00 37.29 2.24
3671 6490 6.183360 CCAAAATAAGTGCCGCTGATTTAGTA 60.183 38.462 0.99 0.00 37.29 1.82
3672 6491 6.604735 AAATAAGTGCCGCTGATTTAGTAG 57.395 37.500 0.00 0.00 36.68 2.57
3673 6492 3.611766 AAGTGCCGCTGATTTAGTAGT 57.388 42.857 0.00 0.00 0.00 2.73
3674 6493 2.893637 AGTGCCGCTGATTTAGTAGTG 58.106 47.619 0.00 0.00 0.00 2.74
3675 6494 1.933853 GTGCCGCTGATTTAGTAGTGG 59.066 52.381 0.00 0.00 45.23 4.00
3676 6495 1.553248 TGCCGCTGATTTAGTAGTGGT 59.447 47.619 0.00 0.00 44.48 4.16
3677 6496 2.761767 TGCCGCTGATTTAGTAGTGGTA 59.238 45.455 0.00 0.00 44.48 3.25
3678 6497 3.386726 TGCCGCTGATTTAGTAGTGGTAT 59.613 43.478 0.00 0.00 44.48 2.73
3679 6498 3.741344 GCCGCTGATTTAGTAGTGGTATG 59.259 47.826 0.00 0.00 44.48 2.39
3680 6499 4.307432 CCGCTGATTTAGTAGTGGTATGG 58.693 47.826 0.00 0.00 39.24 2.74
3681 6500 4.038763 CCGCTGATTTAGTAGTGGTATGGA 59.961 45.833 0.00 0.00 39.24 3.41
3682 6501 5.223382 CGCTGATTTAGTAGTGGTATGGAG 58.777 45.833 0.00 0.00 0.00 3.86
3683 6502 5.542779 GCTGATTTAGTAGTGGTATGGAGG 58.457 45.833 0.00 0.00 0.00 4.30
3684 6503 5.511545 GCTGATTTAGTAGTGGTATGGAGGG 60.512 48.000 0.00 0.00 0.00 4.30
3685 6504 5.784023 TGATTTAGTAGTGGTATGGAGGGA 58.216 41.667 0.00 0.00 0.00 4.20
3686 6505 5.839063 TGATTTAGTAGTGGTATGGAGGGAG 59.161 44.000 0.00 0.00 0.00 4.30
3687 6506 4.894252 TTAGTAGTGGTATGGAGGGAGT 57.106 45.455 0.00 0.00 0.00 3.85
3688 6507 5.999987 TTAGTAGTGGTATGGAGGGAGTA 57.000 43.478 0.00 0.00 0.00 2.59
3689 6508 4.181799 AGTAGTGGTATGGAGGGAGTAC 57.818 50.000 0.00 0.00 0.00 2.73
3690 6509 3.792684 AGTAGTGGTATGGAGGGAGTACT 59.207 47.826 0.00 0.00 0.00 2.73
3691 6510 4.980342 AGTAGTGGTATGGAGGGAGTACTA 59.020 45.833 0.00 0.00 0.00 1.82
3692 6511 4.894252 AGTGGTATGGAGGGAGTACTAA 57.106 45.455 0.00 0.00 0.00 2.24
3693 6512 5.216665 AGTGGTATGGAGGGAGTACTAAA 57.783 43.478 0.00 0.00 0.00 1.85
3694 6513 5.789535 AGTGGTATGGAGGGAGTACTAAAT 58.210 41.667 0.00 0.00 0.00 1.40
3695 6514 6.930475 AGTGGTATGGAGGGAGTACTAAATA 58.070 40.000 0.00 0.00 0.00 1.40
3696 6515 7.011382 AGTGGTATGGAGGGAGTACTAAATAG 58.989 42.308 0.00 0.00 0.00 1.73
3697 6516 7.008941 GTGGTATGGAGGGAGTACTAAATAGA 58.991 42.308 0.00 0.00 0.00 1.98
3698 6517 7.674772 GTGGTATGGAGGGAGTACTAAATAGAT 59.325 40.741 0.00 0.00 0.00 1.98
3699 6518 8.239478 TGGTATGGAGGGAGTACTAAATAGATT 58.761 37.037 0.00 0.00 0.00 2.40
3700 6519 8.532819 GGTATGGAGGGAGTACTAAATAGATTG 58.467 40.741 0.00 0.00 0.00 2.67
3701 6520 9.091220 GTATGGAGGGAGTACTAAATAGATTGT 57.909 37.037 0.00 0.00 0.00 2.71
3703 6522 9.670442 ATGGAGGGAGTACTAAATAGATTGTAA 57.330 33.333 0.00 0.00 0.00 2.41
3704 6523 9.496710 TGGAGGGAGTACTAAATAGATTGTAAA 57.503 33.333 0.00 0.00 0.00 2.01
3705 6524 9.761504 GGAGGGAGTACTAAATAGATTGTAAAC 57.238 37.037 0.00 0.00 0.00 2.01
3706 6525 9.761504 GAGGGAGTACTAAATAGATTGTAAACC 57.238 37.037 0.00 0.00 0.00 3.27
3707 6526 9.275572 AGGGAGTACTAAATAGATTGTAAACCA 57.724 33.333 0.00 0.00 0.00 3.67
3708 6527 9.543783 GGGAGTACTAAATAGATTGTAAACCAG 57.456 37.037 0.00 0.00 0.00 4.00
3709 6528 9.043079 GGAGTACTAAATAGATTGTAAACCAGC 57.957 37.037 0.00 0.00 0.00 4.85
3710 6529 9.595823 GAGTACTAAATAGATTGTAAACCAGCA 57.404 33.333 0.00 0.00 0.00 4.41
3711 6530 9.953565 AGTACTAAATAGATTGTAAACCAGCAA 57.046 29.630 0.00 0.00 0.00 3.91
3717 6536 8.409358 AATAGATTGTAAACCAGCAAAAGTCT 57.591 30.769 0.00 0.00 0.00 3.24
3718 6537 6.076981 AGATTGTAAACCAGCAAAAGTCTG 57.923 37.500 0.00 0.00 0.00 3.51
3726 6545 3.279853 CAGCAAAAGTCTGGAAAGCTC 57.720 47.619 0.00 0.00 0.00 4.09
3727 6546 2.620115 CAGCAAAAGTCTGGAAAGCTCA 59.380 45.455 0.00 0.00 0.00 4.26
3728 6547 2.883386 AGCAAAAGTCTGGAAAGCTCAG 59.117 45.455 0.00 0.00 0.00 3.35
3729 6548 2.620585 GCAAAAGTCTGGAAAGCTCAGT 59.379 45.455 1.25 0.00 34.15 3.41
3730 6549 3.067320 GCAAAAGTCTGGAAAGCTCAGTT 59.933 43.478 1.25 0.00 34.15 3.16
3731 6550 4.440663 GCAAAAGTCTGGAAAGCTCAGTTT 60.441 41.667 1.25 0.00 34.15 2.66
3732 6551 5.654497 CAAAAGTCTGGAAAGCTCAGTTTT 58.346 37.500 1.25 0.00 34.15 2.43
3733 6552 5.921962 AAAGTCTGGAAAGCTCAGTTTTT 57.078 34.783 1.25 1.76 34.15 1.94
3734 6553 4.907879 AGTCTGGAAAGCTCAGTTTTTG 57.092 40.909 1.25 0.00 34.15 2.44
3735 6554 3.067320 AGTCTGGAAAGCTCAGTTTTTGC 59.933 43.478 1.25 0.00 34.15 3.68
3736 6555 3.023119 TCTGGAAAGCTCAGTTTTTGCA 58.977 40.909 1.25 0.00 34.24 4.08
3737 6556 3.638160 TCTGGAAAGCTCAGTTTTTGCAT 59.362 39.130 1.25 0.00 34.77 3.96
3738 6557 3.719924 TGGAAAGCTCAGTTTTTGCATG 58.280 40.909 0.00 0.00 31.08 4.06
3739 6558 3.384146 TGGAAAGCTCAGTTTTTGCATGA 59.616 39.130 0.00 0.00 31.08 3.07
3740 6559 4.039488 TGGAAAGCTCAGTTTTTGCATGAT 59.961 37.500 0.00 0.00 31.08 2.45
3741 6560 4.387862 GGAAAGCTCAGTTTTTGCATGATG 59.612 41.667 0.00 0.00 0.00 3.07
3742 6561 3.587797 AGCTCAGTTTTTGCATGATGG 57.412 42.857 0.00 0.00 0.00 3.51
3743 6562 2.895404 AGCTCAGTTTTTGCATGATGGT 59.105 40.909 0.00 0.00 0.00 3.55
3744 6563 3.322828 AGCTCAGTTTTTGCATGATGGTT 59.677 39.130 0.00 0.00 0.00 3.67
3745 6564 4.523943 AGCTCAGTTTTTGCATGATGGTTA 59.476 37.500 0.00 0.00 0.00 2.85
3746 6565 5.010922 AGCTCAGTTTTTGCATGATGGTTAA 59.989 36.000 0.00 0.00 0.00 2.01
3747 6566 5.346822 GCTCAGTTTTTGCATGATGGTTAAG 59.653 40.000 0.00 0.00 0.00 1.85
3748 6567 6.403866 TCAGTTTTTGCATGATGGTTAAGT 57.596 33.333 0.00 0.00 0.00 2.24
3749 6568 6.815089 TCAGTTTTTGCATGATGGTTAAGTT 58.185 32.000 0.00 0.00 0.00 2.66
3750 6569 7.271511 TCAGTTTTTGCATGATGGTTAAGTTT 58.728 30.769 0.00 0.00 0.00 2.66
3751 6570 7.768120 TCAGTTTTTGCATGATGGTTAAGTTTT 59.232 29.630 0.00 0.00 0.00 2.43
3752 6571 8.063630 CAGTTTTTGCATGATGGTTAAGTTTTC 58.936 33.333 0.00 0.00 0.00 2.29
3753 6572 6.761731 TTTTGCATGATGGTTAAGTTTTCG 57.238 33.333 0.00 0.00 0.00 3.46
3754 6573 5.697473 TTGCATGATGGTTAAGTTTTCGA 57.303 34.783 0.00 0.00 0.00 3.71
3755 6574 5.697473 TGCATGATGGTTAAGTTTTCGAA 57.303 34.783 0.00 0.00 0.00 3.71
3756 6575 6.078202 TGCATGATGGTTAAGTTTTCGAAA 57.922 33.333 6.47 6.47 0.00 3.46
3757 6576 6.507900 TGCATGATGGTTAAGTTTTCGAAAA 58.492 32.000 19.08 19.08 0.00 2.29
3758 6577 7.151308 TGCATGATGGTTAAGTTTTCGAAAAT 58.849 30.769 24.93 13.46 0.00 1.82
3759 6578 7.328249 TGCATGATGGTTAAGTTTTCGAAAATC 59.672 33.333 24.93 17.77 0.00 2.17
3760 6579 7.328249 GCATGATGGTTAAGTTTTCGAAAATCA 59.672 33.333 24.93 20.36 0.00 2.57
3761 6580 9.357652 CATGATGGTTAAGTTTTCGAAAATCAT 57.642 29.630 24.93 21.47 0.00 2.45
3768 6587 9.952341 GTTAAGTTTTCGAAAATCATAATTGGC 57.048 29.630 24.93 9.13 0.00 4.52
3769 6588 9.698309 TTAAGTTTTCGAAAATCATAATTGGCA 57.302 25.926 24.93 0.00 0.00 4.92
3770 6589 7.816945 AGTTTTCGAAAATCATAATTGGCAG 57.183 32.000 24.93 0.00 0.00 4.85
3771 6590 6.311200 AGTTTTCGAAAATCATAATTGGCAGC 59.689 34.615 24.93 8.07 0.00 5.25
3772 6591 5.581126 TTCGAAAATCATAATTGGCAGCT 57.419 34.783 0.00 0.00 0.00 4.24
3773 6592 4.923893 TCGAAAATCATAATTGGCAGCTG 58.076 39.130 10.11 10.11 0.00 4.24
3774 6593 4.639755 TCGAAAATCATAATTGGCAGCTGA 59.360 37.500 20.43 0.00 0.00 4.26
3775 6594 4.974275 CGAAAATCATAATTGGCAGCTGAG 59.026 41.667 20.43 0.00 0.00 3.35
3776 6595 5.220912 CGAAAATCATAATTGGCAGCTGAGA 60.221 40.000 20.43 1.71 0.00 3.27
3777 6596 5.769484 AAATCATAATTGGCAGCTGAGAG 57.231 39.130 20.43 0.00 0.00 3.20
3778 6597 4.701651 ATCATAATTGGCAGCTGAGAGA 57.298 40.909 20.43 3.28 0.00 3.10
3779 6598 4.069300 TCATAATTGGCAGCTGAGAGAG 57.931 45.455 20.43 0.00 0.00 3.20
3780 6599 2.996249 TAATTGGCAGCTGAGAGAGG 57.004 50.000 20.43 0.00 0.00 3.69
3781 6600 1.283347 AATTGGCAGCTGAGAGAGGA 58.717 50.000 20.43 0.00 0.00 3.71
3782 6601 1.509373 ATTGGCAGCTGAGAGAGGAT 58.491 50.000 20.43 0.00 0.00 3.24
3783 6602 0.540454 TTGGCAGCTGAGAGAGGATG 59.460 55.000 20.43 0.00 0.00 3.51
3784 6603 1.335882 TGGCAGCTGAGAGAGGATGG 61.336 60.000 20.43 0.00 0.00 3.51
3785 6604 1.047596 GGCAGCTGAGAGAGGATGGA 61.048 60.000 20.43 0.00 0.00 3.41
3786 6605 0.829333 GCAGCTGAGAGAGGATGGAA 59.171 55.000 20.43 0.00 0.00 3.53
3787 6606 1.209019 GCAGCTGAGAGAGGATGGAAA 59.791 52.381 20.43 0.00 0.00 3.13
3788 6607 2.742530 GCAGCTGAGAGAGGATGGAAAG 60.743 54.545 20.43 0.00 0.00 2.62
3789 6608 1.485895 AGCTGAGAGAGGATGGAAAGC 59.514 52.381 0.00 0.00 0.00 3.51
3790 6609 1.209019 GCTGAGAGAGGATGGAAAGCA 59.791 52.381 0.00 0.00 0.00 3.91
3791 6610 2.355513 GCTGAGAGAGGATGGAAAGCAA 60.356 50.000 0.00 0.00 0.00 3.91
3792 6611 3.871463 GCTGAGAGAGGATGGAAAGCAAA 60.871 47.826 0.00 0.00 0.00 3.68
3793 6612 4.525024 CTGAGAGAGGATGGAAAGCAAAT 58.475 43.478 0.00 0.00 0.00 2.32
3794 6613 4.927049 TGAGAGAGGATGGAAAGCAAATT 58.073 39.130 0.00 0.00 0.00 1.82
3795 6614 5.327732 TGAGAGAGGATGGAAAGCAAATTT 58.672 37.500 0.00 0.00 0.00 1.82
3796 6615 6.484288 TGAGAGAGGATGGAAAGCAAATTTA 58.516 36.000 0.00 0.00 0.00 1.40
3797 6616 7.121382 TGAGAGAGGATGGAAAGCAAATTTAT 58.879 34.615 0.00 0.00 0.00 1.40
3798 6617 7.616935 TGAGAGAGGATGGAAAGCAAATTTATT 59.383 33.333 0.00 0.00 0.00 1.40
3799 6618 9.125026 GAGAGAGGATGGAAAGCAAATTTATTA 57.875 33.333 0.00 0.00 0.00 0.98
3800 6619 8.907885 AGAGAGGATGGAAAGCAAATTTATTAC 58.092 33.333 0.00 0.00 0.00 1.89
3801 6620 8.829373 AGAGGATGGAAAGCAAATTTATTACT 57.171 30.769 0.00 0.00 0.00 2.24
3802 6621 8.689972 AGAGGATGGAAAGCAAATTTATTACTG 58.310 33.333 0.00 0.00 0.00 2.74
3803 6622 7.785033 AGGATGGAAAGCAAATTTATTACTGG 58.215 34.615 0.00 0.00 0.00 4.00
3804 6623 7.619302 AGGATGGAAAGCAAATTTATTACTGGA 59.381 33.333 0.00 0.00 0.00 3.86
3805 6624 7.706607 GGATGGAAAGCAAATTTATTACTGGAC 59.293 37.037 0.00 0.00 0.00 4.02
3806 6625 7.531857 TGGAAAGCAAATTTATTACTGGACA 57.468 32.000 0.00 0.00 0.00 4.02
3807 6626 7.957002 TGGAAAGCAAATTTATTACTGGACAA 58.043 30.769 0.00 0.00 0.00 3.18
3808 6627 7.870445 TGGAAAGCAAATTTATTACTGGACAAC 59.130 33.333 0.00 0.00 0.00 3.32
3809 6628 8.088365 GGAAAGCAAATTTATTACTGGACAACT 58.912 33.333 0.00 0.00 0.00 3.16
3810 6629 9.476202 GAAAGCAAATTTATTACTGGACAACTT 57.524 29.630 0.00 0.00 0.00 2.66
3811 6630 9.830975 AAAGCAAATTTATTACTGGACAACTTT 57.169 25.926 0.00 0.00 0.00 2.66
3818 6637 9.975218 ATTTATTACTGGACAACTTTATCTGGT 57.025 29.630 0.00 0.00 0.00 4.00
3819 6638 9.802039 TTTATTACTGGACAACTTTATCTGGTT 57.198 29.630 0.00 0.00 0.00 3.67
3820 6639 7.687941 ATTACTGGACAACTTTATCTGGTTG 57.312 36.000 0.00 0.00 45.55 3.77
3838 6657 8.934023 TCTGGTTGTAGAAAATTACAAATCCT 57.066 30.769 0.64 0.00 43.11 3.24
3839 6658 8.792633 TCTGGTTGTAGAAAATTACAAATCCTG 58.207 33.333 0.64 4.08 43.11 3.86
3840 6659 7.375053 TGGTTGTAGAAAATTACAAATCCTGC 58.625 34.615 0.64 0.00 43.11 4.85
3841 6660 7.232534 TGGTTGTAGAAAATTACAAATCCTGCT 59.767 33.333 0.64 0.00 43.11 4.24
3842 6661 7.542130 GGTTGTAGAAAATTACAAATCCTGCTG 59.458 37.037 0.64 0.00 43.11 4.41
3843 6662 7.759489 TGTAGAAAATTACAAATCCTGCTGT 57.241 32.000 0.00 0.00 30.94 4.40
3844 6663 8.177119 TGTAGAAAATTACAAATCCTGCTGTT 57.823 30.769 0.00 0.00 30.94 3.16
3845 6664 9.290988 TGTAGAAAATTACAAATCCTGCTGTTA 57.709 29.630 0.00 0.00 30.94 2.41
3850 6669 7.832503 AATTACAAATCCTGCTGTTATTTGC 57.167 32.000 19.62 0.00 41.94 3.68
3851 6670 4.192429 ACAAATCCTGCTGTTATTTGCC 57.808 40.909 19.62 0.00 41.94 4.52
3852 6671 3.181397 CAAATCCTGCTGTTATTTGCCG 58.819 45.455 12.51 0.00 34.78 5.69
3853 6672 0.740737 ATCCTGCTGTTATTTGCCGC 59.259 50.000 0.00 0.00 0.00 6.53
3854 6673 0.607762 TCCTGCTGTTATTTGCCGCA 60.608 50.000 0.00 0.00 0.00 5.69
3855 6674 0.243365 CCTGCTGTTATTTGCCGCAA 59.757 50.000 0.38 0.38 0.00 4.85
3856 6675 1.336702 CCTGCTGTTATTTGCCGCAAA 60.337 47.619 20.38 20.38 37.75 3.68
3857 6676 2.402305 CTGCTGTTATTTGCCGCAAAA 58.598 42.857 21.80 9.19 36.90 2.44
3858 6677 2.995258 CTGCTGTTATTTGCCGCAAAAT 59.005 40.909 21.80 12.80 36.90 1.82
3859 6678 3.397482 TGCTGTTATTTGCCGCAAAATT 58.603 36.364 21.80 9.65 36.90 1.82
3860 6679 3.812053 TGCTGTTATTTGCCGCAAAATTT 59.188 34.783 21.80 8.94 36.90 1.82
3861 6680 4.084118 TGCTGTTATTTGCCGCAAAATTTC 60.084 37.500 21.80 12.83 36.90 2.17
3862 6681 4.152223 GCTGTTATTTGCCGCAAAATTTCT 59.848 37.500 21.80 8.23 36.90 2.52
3863 6682 5.668621 GCTGTTATTTGCCGCAAAATTTCTC 60.669 40.000 21.80 10.15 36.90 2.87
3864 6683 5.537188 TGTTATTTGCCGCAAAATTTCTCT 58.463 33.333 21.80 6.84 36.90 3.10
3865 6684 5.988561 TGTTATTTGCCGCAAAATTTCTCTT 59.011 32.000 21.80 6.14 36.90 2.85
3866 6685 6.145371 TGTTATTTGCCGCAAAATTTCTCTTC 59.855 34.615 21.80 6.65 36.90 2.87
3867 6686 2.723124 TGCCGCAAAATTTCTCTTCC 57.277 45.000 0.00 0.00 0.00 3.46
3868 6687 2.238521 TGCCGCAAAATTTCTCTTCCT 58.761 42.857 0.00 0.00 0.00 3.36
3869 6688 2.228822 TGCCGCAAAATTTCTCTTCCTC 59.771 45.455 0.00 0.00 0.00 3.71
3870 6689 2.489722 GCCGCAAAATTTCTCTTCCTCT 59.510 45.455 0.00 0.00 0.00 3.69
3871 6690 3.057245 GCCGCAAAATTTCTCTTCCTCTT 60.057 43.478 0.00 0.00 0.00 2.85
3872 6691 4.156008 GCCGCAAAATTTCTCTTCCTCTTA 59.844 41.667 0.00 0.00 0.00 2.10
3873 6692 5.631992 CCGCAAAATTTCTCTTCCTCTTAC 58.368 41.667 0.00 0.00 0.00 2.34
3874 6693 5.181245 CCGCAAAATTTCTCTTCCTCTTACA 59.819 40.000 0.00 0.00 0.00 2.41
3875 6694 6.293955 CCGCAAAATTTCTCTTCCTCTTACAA 60.294 38.462 0.00 0.00 0.00 2.41
3876 6695 7.308435 CGCAAAATTTCTCTTCCTCTTACAAT 58.692 34.615 0.00 0.00 0.00 2.71
3877 6696 7.809806 CGCAAAATTTCTCTTCCTCTTACAATT 59.190 33.333 0.00 0.00 0.00 2.32
3878 6697 9.481340 GCAAAATTTCTCTTCCTCTTACAATTT 57.519 29.630 0.00 0.00 0.00 1.82
3881 6700 9.971922 AAATTTCTCTTCCTCTTACAATTTGTG 57.028 29.630 12.30 0.00 0.00 3.33
3882 6701 8.697507 ATTTCTCTTCCTCTTACAATTTGTGT 57.302 30.769 12.30 0.00 44.82 3.72
3883 6702 7.496529 TTCTCTTCCTCTTACAATTTGTGTG 57.503 36.000 12.30 5.01 41.89 3.82
3884 6703 6.591935 TCTCTTCCTCTTACAATTTGTGTGT 58.408 36.000 12.30 0.00 41.89 3.72
3885 6704 7.054124 TCTCTTCCTCTTACAATTTGTGTGTT 58.946 34.615 12.30 0.00 41.89 3.32
3886 6705 7.556275 TCTCTTCCTCTTACAATTTGTGTGTTT 59.444 33.333 12.30 0.00 41.89 2.83
3887 6706 7.703328 TCTTCCTCTTACAATTTGTGTGTTTC 58.297 34.615 12.30 0.00 41.89 2.78
3888 6707 7.556275 TCTTCCTCTTACAATTTGTGTGTTTCT 59.444 33.333 12.30 0.00 41.89 2.52
3889 6708 8.740123 TTCCTCTTACAATTTGTGTGTTTCTA 57.260 30.769 12.30 0.00 41.89 2.10
3890 6709 8.740123 TCCTCTTACAATTTGTGTGTTTCTAA 57.260 30.769 12.30 0.00 41.89 2.10
3891 6710 9.179909 TCCTCTTACAATTTGTGTGTTTCTAAA 57.820 29.630 12.30 0.00 41.89 1.85
3892 6711 9.450807 CCTCTTACAATTTGTGTGTTTCTAAAG 57.549 33.333 12.30 4.74 41.89 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 5.700832 CGGCCTATAAATTCAGCACTTATGA 59.299 40.000 0.00 0.00 0.00 2.15
69 70 2.029728 CGCTTCTCTCCGCAAGTAATTG 59.970 50.000 0.00 0.00 0.00 2.32
88 89 2.286654 GCCTCTGACAGATTTATTGCGC 60.287 50.000 5.42 0.00 0.00 6.09
95 96 3.988976 TTGCTAGCCTCTGACAGATTT 57.011 42.857 13.29 0.00 0.00 2.17
108 109 1.872313 GGAGATGTGCTCATTGCTAGC 59.128 52.381 8.10 8.10 45.81 3.42
117 118 2.479566 TTTGTCCTGGAGATGTGCTC 57.520 50.000 0.00 0.00 43.17 4.26
164 165 4.988598 AGAACCGTGGTGCAGCCG 62.989 66.667 14.36 15.67 41.21 5.52
166 167 2.117941 GACAAGAACCGTGGTGCAGC 62.118 60.000 9.47 9.47 0.00 5.25
167 168 1.507141 GGACAAGAACCGTGGTGCAG 61.507 60.000 0.00 0.00 0.00 4.41
178 183 1.411246 AGTGCAGTGTACGGACAAGAA 59.589 47.619 0.00 0.00 37.31 2.52
182 187 1.001048 GTACAGTGCAGTGTACGGACA 60.001 52.381 36.45 16.79 42.48 4.02
193 198 0.678684 TCCGAGATCCGTACAGTGCA 60.679 55.000 0.00 0.00 36.31 4.57
208 213 8.449397 GCGAAAGATTATACTACTCTATTCCGA 58.551 37.037 0.00 0.00 0.00 4.55
209 214 8.452534 AGCGAAAGATTATACTACTCTATTCCG 58.547 37.037 0.00 0.00 0.00 4.30
210 215 9.777575 GAGCGAAAGATTATACTACTCTATTCC 57.222 37.037 0.00 0.00 0.00 3.01
211 216 9.777575 GGAGCGAAAGATTATACTACTCTATTC 57.222 37.037 0.00 0.00 0.00 1.75
213 218 7.823310 TCGGAGCGAAAGATTATACTACTCTAT 59.177 37.037 0.00 0.00 31.06 1.98
214 219 7.157347 TCGGAGCGAAAGATTATACTACTCTA 58.843 38.462 0.00 0.00 31.06 2.43
215 220 5.996513 TCGGAGCGAAAGATTATACTACTCT 59.003 40.000 0.00 0.00 31.06 3.24
216 221 6.238610 TCGGAGCGAAAGATTATACTACTC 57.761 41.667 0.00 0.00 31.06 2.59
217 222 6.655848 AGATCGGAGCGAAAGATTATACTACT 59.344 38.462 0.00 0.00 39.99 2.57
218 223 6.844254 AGATCGGAGCGAAAGATTATACTAC 58.156 40.000 0.00 0.00 39.99 2.73
220 225 5.968528 AGATCGGAGCGAAAGATTATACT 57.031 39.130 0.00 0.00 39.99 2.12
221 226 7.062022 GGTAAAGATCGGAGCGAAAGATTATAC 59.938 40.741 0.00 0.00 39.99 1.47
222 227 7.039923 AGGTAAAGATCGGAGCGAAAGATTATA 60.040 37.037 0.00 0.00 39.99 0.98
223 228 5.927115 GGTAAAGATCGGAGCGAAAGATTAT 59.073 40.000 0.00 0.00 39.99 1.28
224 229 5.068723 AGGTAAAGATCGGAGCGAAAGATTA 59.931 40.000 0.00 0.00 39.99 1.75
225 230 4.120589 GGTAAAGATCGGAGCGAAAGATT 58.879 43.478 0.00 0.00 39.99 2.40
226 231 3.385111 AGGTAAAGATCGGAGCGAAAGAT 59.615 43.478 0.00 0.00 39.99 2.40
227 232 2.758979 AGGTAAAGATCGGAGCGAAAGA 59.241 45.455 0.00 0.00 39.99 2.52
228 233 3.166489 AGGTAAAGATCGGAGCGAAAG 57.834 47.619 0.00 0.00 39.99 2.62
230 235 3.604875 AAAGGTAAAGATCGGAGCGAA 57.395 42.857 0.00 0.00 39.99 4.70
231 236 3.604875 AAAAGGTAAAGATCGGAGCGA 57.395 42.857 0.00 0.00 41.13 4.93
232 237 4.033702 GGTAAAAAGGTAAAGATCGGAGCG 59.966 45.833 0.00 0.00 0.00 5.03
233 238 4.334759 GGGTAAAAAGGTAAAGATCGGAGC 59.665 45.833 0.00 0.00 0.00 4.70
234 239 5.742063 AGGGTAAAAAGGTAAAGATCGGAG 58.258 41.667 0.00 0.00 0.00 4.63
235 240 5.767277 AGGGTAAAAAGGTAAAGATCGGA 57.233 39.130 0.00 0.00 0.00 4.55
236 241 5.124936 CCAAGGGTAAAAAGGTAAAGATCGG 59.875 44.000 0.00 0.00 0.00 4.18
248 253 2.362717 CGGCTCAAACCAAGGGTAAAAA 59.637 45.455 0.00 0.00 33.12 1.94
253 258 1.528309 CACGGCTCAAACCAAGGGT 60.528 57.895 0.00 0.00 37.65 4.34
257 262 2.844451 GCAGCACGGCTCAAACCAA 61.844 57.895 0.00 0.00 36.40 3.67
258 263 3.286751 GCAGCACGGCTCAAACCA 61.287 61.111 0.00 0.00 36.40 3.67
260 265 1.370900 CTTGCAGCACGGCTCAAAC 60.371 57.895 0.00 0.00 36.40 2.93
261 266 1.823470 ACTTGCAGCACGGCTCAAA 60.823 52.632 3.60 0.00 36.40 2.69
262 267 2.203195 ACTTGCAGCACGGCTCAA 60.203 55.556 3.60 3.89 36.40 3.02
263 268 2.974148 CACTTGCAGCACGGCTCA 60.974 61.111 3.60 0.00 36.40 4.26
264 269 4.395583 GCACTTGCAGCACGGCTC 62.396 66.667 3.60 0.00 36.40 4.70
301 306 2.746277 CCCTTCCCTCCGTTTGCG 60.746 66.667 0.00 0.00 37.95 4.85
302 307 1.377333 CTCCCTTCCCTCCGTTTGC 60.377 63.158 0.00 0.00 0.00 3.68
303 308 1.377333 GCTCCCTTCCCTCCGTTTG 60.377 63.158 0.00 0.00 0.00 2.93
304 309 1.539124 AGCTCCCTTCCCTCCGTTT 60.539 57.895 0.00 0.00 0.00 3.60
305 310 2.122954 AGCTCCCTTCCCTCCGTT 59.877 61.111 0.00 0.00 0.00 4.44
306 311 2.685380 CAGCTCCCTTCCCTCCGT 60.685 66.667 0.00 0.00 0.00 4.69
307 312 4.168291 GCAGCTCCCTTCCCTCCG 62.168 72.222 0.00 0.00 0.00 4.63
308 313 0.983378 TTAGCAGCTCCCTTCCCTCC 60.983 60.000 0.00 0.00 0.00 4.30
309 314 0.467804 CTTAGCAGCTCCCTTCCCTC 59.532 60.000 0.00 0.00 0.00 4.30
310 315 0.985490 CCTTAGCAGCTCCCTTCCCT 60.985 60.000 0.00 0.00 0.00 4.20
311 316 1.275421 ACCTTAGCAGCTCCCTTCCC 61.275 60.000 0.00 0.00 0.00 3.97
312 317 0.621082 AACCTTAGCAGCTCCCTTCC 59.379 55.000 0.00 0.00 0.00 3.46
313 318 2.087646 CAAACCTTAGCAGCTCCCTTC 58.912 52.381 0.00 0.00 0.00 3.46
314 319 1.888391 GCAAACCTTAGCAGCTCCCTT 60.888 52.381 0.00 0.00 0.00 3.95
315 320 0.322906 GCAAACCTTAGCAGCTCCCT 60.323 55.000 0.00 0.00 0.00 4.20
316 321 1.648467 CGCAAACCTTAGCAGCTCCC 61.648 60.000 0.00 0.00 0.00 4.30
317 322 1.796796 CGCAAACCTTAGCAGCTCC 59.203 57.895 0.00 0.00 0.00 4.70
377 383 2.223089 GCATTGAATTGAAAATGGGCGC 60.223 45.455 0.00 0.00 34.90 6.53
498 532 0.038709 TTGTTTATTGGCAGCGGCAC 60.039 50.000 11.88 0.00 43.71 5.01
573 613 3.456277 GTCTTCTCCCTCTCTCTCTCTCT 59.544 52.174 0.00 0.00 0.00 3.10
583 626 2.158234 ACAGTCTTGGTCTTCTCCCTCT 60.158 50.000 0.00 0.00 0.00 3.69
864 3134 0.693049 GGAAGTGAGCAAGGAAGGGA 59.307 55.000 0.00 0.00 0.00 4.20
867 3137 3.749226 AGAAAGGAAGTGAGCAAGGAAG 58.251 45.455 0.00 0.00 0.00 3.46
868 3138 3.392616 AGAGAAAGGAAGTGAGCAAGGAA 59.607 43.478 0.00 0.00 0.00 3.36
869 3139 2.975489 AGAGAAAGGAAGTGAGCAAGGA 59.025 45.455 0.00 0.00 0.00 3.36
874 3148 3.750652 CAGGAAAGAGAAAGGAAGTGAGC 59.249 47.826 0.00 0.00 0.00 4.26
881 3155 3.325135 GTGAGGTCAGGAAAGAGAAAGGA 59.675 47.826 0.00 0.00 0.00 3.36
965 3247 2.050269 CGACCAACCTCACCTCACT 58.950 57.895 0.00 0.00 0.00 3.41
966 3248 1.668151 GCGACCAACCTCACCTCAC 60.668 63.158 0.00 0.00 0.00 3.51
973 3255 2.435059 GCCTCAGCGACCAACCTC 60.435 66.667 0.00 0.00 0.00 3.85
1114 3396 4.078922 AGAGAGAGAGAGAGAGAGAGAGGA 60.079 50.000 0.00 0.00 0.00 3.71
1197 3483 6.566197 AACATCATCACTGGAAAGAGAAAC 57.434 37.500 0.00 0.00 0.00 2.78
1232 3518 2.498726 GCTTCTGGCCCTCTCTCG 59.501 66.667 0.00 0.00 34.27 4.04
1241 3527 4.331168 CCATTATAATCTAGCGCTTCTGGC 59.669 45.833 18.68 0.00 37.64 4.85
1243 3529 7.426929 AAACCATTATAATCTAGCGCTTCTG 57.573 36.000 18.68 6.84 0.00 3.02
1246 3532 6.016276 CCCAAAACCATTATAATCTAGCGCTT 60.016 38.462 18.68 0.00 0.00 4.68
1282 3569 4.095932 ACTCAGTCGGTCAAAAAGGAAAAC 59.904 41.667 0.00 0.00 0.00 2.43
1286 3573 2.432874 TCACTCAGTCGGTCAAAAAGGA 59.567 45.455 0.00 0.00 0.00 3.36
1425 3753 1.069973 CAAAAGCTCGTGCGATTCACA 60.070 47.619 3.48 0.00 45.92 3.58
1823 4157 1.974875 TAGTTGAGCGTCCGGAGCA 60.975 57.895 22.44 9.71 37.01 4.26
1827 4161 2.564975 ACGTAGTTGAGCGTCCGG 59.435 61.111 0.00 0.00 37.78 5.14
1896 4230 3.386237 ACCCAGGTGAGCTCGCTC 61.386 66.667 25.54 15.92 43.01 5.03
2253 4590 2.889045 CTGCTCCATGGTTTGGGATATG 59.111 50.000 12.58 0.00 46.45 1.78
2262 4599 1.675641 GCCGAACTGCTCCATGGTT 60.676 57.895 12.58 0.00 0.00 3.67
2357 4694 1.914764 GGGGTGGAGTTCCGGTACA 60.915 63.158 14.14 0.00 39.43 2.90
2364 4701 1.153628 CACGATCGGGGTGGAGTTC 60.154 63.158 20.98 0.00 0.00 3.01
2580 4923 4.162690 GGGTACTCCGCCAGCTGG 62.163 72.222 29.34 29.34 38.53 4.85
2838 5181 4.668118 GACCCCGCGGTGTCGAAA 62.668 66.667 24.78 0.00 44.88 3.46
2852 5195 1.227002 GCGAACCCGATCTGAGACC 60.227 63.158 0.00 0.00 38.22 3.85
2856 5199 3.289704 TTGCGCGAACCCGATCTGA 62.290 57.895 12.10 0.00 38.22 3.27
2874 5217 9.288576 TCAAATCAAATGTAATCACAAGTCTCT 57.711 29.630 0.00 0.00 38.42 3.10
2909 5252 2.965147 TCACACACACAGAGAGATTCCA 59.035 45.455 0.00 0.00 0.00 3.53
2910 5253 3.006323 ACTCACACACACAGAGAGATTCC 59.994 47.826 0.00 0.00 33.69 3.01
2911 5254 3.986572 CACTCACACACACAGAGAGATTC 59.013 47.826 0.00 0.00 33.69 2.52
2912 5255 3.386078 ACACTCACACACACAGAGAGATT 59.614 43.478 0.00 0.00 33.69 2.40
2913 5256 2.961741 ACACTCACACACACAGAGAGAT 59.038 45.455 0.00 0.00 33.69 2.75
2914 5257 2.099756 CACACTCACACACACAGAGAGA 59.900 50.000 0.00 0.00 33.69 3.10
2915 5258 2.159184 ACACACTCACACACACAGAGAG 60.159 50.000 0.00 0.00 33.69 3.20
2916 5259 1.824852 ACACACTCACACACACAGAGA 59.175 47.619 0.00 0.00 33.69 3.10
2917 5260 1.929169 CACACACTCACACACACAGAG 59.071 52.381 0.00 0.00 35.56 3.35
2918 5261 1.275010 ACACACACTCACACACACAGA 59.725 47.619 0.00 0.00 0.00 3.41
2922 5265 2.464157 TTCACACACACTCACACACA 57.536 45.000 0.00 0.00 0.00 3.72
2930 5273 7.344612 TCCAACTATAGGATATTCACACACACT 59.655 37.037 4.43 0.00 0.00 3.55
2956 5303 3.627577 CCGATCGATCCCAAAACAAATCT 59.372 43.478 18.66 0.00 0.00 2.40
3043 5415 5.180117 AGAGCAACTACTACAAATGCTTGTG 59.820 40.000 1.78 0.00 46.58 3.33
3078 5454 9.844257 AGAAATGAAAGAAGAAGAAGAAGAAGA 57.156 29.630 0.00 0.00 0.00 2.87
3116 5495 1.484038 ACAAAAACCCAGCAGCTTCA 58.516 45.000 0.00 0.00 0.00 3.02
3117 5496 2.602257 AACAAAAACCCAGCAGCTTC 57.398 45.000 0.00 0.00 0.00 3.86
3118 5497 3.348647 AAAACAAAAACCCAGCAGCTT 57.651 38.095 0.00 0.00 0.00 3.74
3168 5547 6.645003 GGGATTAACTTTGACAATTCCACAAC 59.355 38.462 0.00 0.00 29.03 3.32
3182 5561 3.941483 CACAGAGCGATGGGATTAACTTT 59.059 43.478 0.00 0.00 0.00 2.66
3183 5562 3.535561 CACAGAGCGATGGGATTAACTT 58.464 45.455 0.00 0.00 0.00 2.66
3184 5563 2.743183 GCACAGAGCGATGGGATTAACT 60.743 50.000 0.00 0.00 0.00 2.24
3185 5564 1.599542 GCACAGAGCGATGGGATTAAC 59.400 52.381 0.00 0.00 0.00 2.01
3186 5565 1.953559 GCACAGAGCGATGGGATTAA 58.046 50.000 0.00 0.00 0.00 1.40
3187 5566 3.686622 GCACAGAGCGATGGGATTA 57.313 52.632 0.00 0.00 0.00 1.75
3188 5567 4.547859 GCACAGAGCGATGGGATT 57.452 55.556 0.00 0.00 0.00 3.01
3197 5576 1.156645 CCGGCAATAGAGCACAGAGC 61.157 60.000 0.00 0.00 46.19 4.09
3198 5577 1.156645 GCCGGCAATAGAGCACAGAG 61.157 60.000 24.80 0.00 35.83 3.35
3200 5579 1.026182 TTGCCGGCAATAGAGCACAG 61.026 55.000 37.30 0.00 34.37 3.66
3201 5580 1.002746 TTGCCGGCAATAGAGCACA 60.003 52.632 37.30 13.21 34.37 4.57
3202 5581 0.744414 TCTTGCCGGCAATAGAGCAC 60.744 55.000 40.03 1.29 34.37 4.40
3203 5582 0.035534 TTCTTGCCGGCAATAGAGCA 60.036 50.000 40.03 19.10 35.20 4.26
3204 5583 1.094785 TTTCTTGCCGGCAATAGAGC 58.905 50.000 40.03 5.60 35.20 4.09
3205 5584 3.378112 TGATTTTCTTGCCGGCAATAGAG 59.622 43.478 40.03 28.70 35.20 2.43
3206 5585 3.351740 TGATTTTCTTGCCGGCAATAGA 58.648 40.909 40.03 31.59 35.20 1.98
3207 5586 3.378112 TCTGATTTTCTTGCCGGCAATAG 59.622 43.478 40.03 29.82 35.20 1.73
3208 5587 3.351740 TCTGATTTTCTTGCCGGCAATA 58.648 40.909 40.03 31.07 35.20 1.90
3210 5589 1.541147 CTCTGATTTTCTTGCCGGCAA 59.459 47.619 37.78 37.78 0.00 4.52
3211 5590 1.167851 CTCTGATTTTCTTGCCGGCA 58.832 50.000 29.03 29.03 0.00 5.69
3213 5592 1.131883 CAGCTCTGATTTTCTTGCCGG 59.868 52.381 0.00 0.00 0.00 6.13
3214 5593 1.467035 GCAGCTCTGATTTTCTTGCCG 60.467 52.381 0.29 0.00 0.00 5.69
3215 5594 1.542915 TGCAGCTCTGATTTTCTTGCC 59.457 47.619 0.29 0.00 0.00 4.52
3216 5595 3.057736 TCTTGCAGCTCTGATTTTCTTGC 60.058 43.478 0.29 0.00 0.00 4.01
3217 5596 4.761235 TCTTGCAGCTCTGATTTTCTTG 57.239 40.909 0.29 0.00 0.00 3.02
3218 5597 5.008331 TGATCTTGCAGCTCTGATTTTCTT 58.992 37.500 0.29 0.00 0.00 2.52
3219 5598 4.395542 GTGATCTTGCAGCTCTGATTTTCT 59.604 41.667 0.29 0.00 0.00 2.52
3220 5599 4.660105 GTGATCTTGCAGCTCTGATTTTC 58.340 43.478 0.29 0.00 0.00 2.29
3221 5600 3.126514 CGTGATCTTGCAGCTCTGATTTT 59.873 43.478 0.29 0.00 0.00 1.82
3222 5601 2.676839 CGTGATCTTGCAGCTCTGATTT 59.323 45.455 0.29 0.00 0.00 2.17
3224 5603 1.206610 ACGTGATCTTGCAGCTCTGAT 59.793 47.619 0.29 0.00 0.00 2.90
3258 6075 8.049117 TCCTCAGCTACATGAAAAATGTTCTAT 58.951 33.333 0.00 0.00 33.76 1.98
3286 6103 8.136800 CCCTGATAATCTGAGATCTATCATTCG 58.863 40.741 18.65 12.06 31.99 3.34
3326 6143 2.099756 GCCTTTATTTGCCTGATCGCTT 59.900 45.455 0.00 0.00 0.00 4.68
3397 6214 4.585070 ACAATGCCTGCACAGTGT 57.415 50.000 4.74 4.74 43.47 3.55
3444 6261 7.559897 AGAGGAAGGATTTGTTTGTTTCTGTTA 59.440 33.333 0.00 0.00 0.00 2.41
3457 6274 5.335976 GCACTTGGTTTAGAGGAAGGATTTG 60.336 44.000 0.00 0.00 0.00 2.32
3458 6275 4.767409 GCACTTGGTTTAGAGGAAGGATTT 59.233 41.667 0.00 0.00 0.00 2.17
3459 6276 4.043435 AGCACTTGGTTTAGAGGAAGGATT 59.957 41.667 0.00 0.00 0.00 3.01
3460 6277 3.589288 AGCACTTGGTTTAGAGGAAGGAT 59.411 43.478 0.00 0.00 0.00 3.24
3461 6278 2.979678 AGCACTTGGTTTAGAGGAAGGA 59.020 45.455 0.00 0.00 0.00 3.36
3466 6283 2.069273 CACGAGCACTTGGTTTAGAGG 58.931 52.381 0.00 0.00 0.00 3.69
3467 6284 2.731976 GACACGAGCACTTGGTTTAGAG 59.268 50.000 0.00 0.00 0.00 2.43
3468 6285 2.750948 GACACGAGCACTTGGTTTAGA 58.249 47.619 0.00 0.00 0.00 2.10
3469 6286 1.455786 CGACACGAGCACTTGGTTTAG 59.544 52.381 0.00 0.00 0.00 1.85
3483 6300 0.248907 AGATTATCCACGGCGACACG 60.249 55.000 16.62 0.00 40.31 4.49
3509 6326 2.300956 TGCCCTTGTTTTCCTGCATA 57.699 45.000 0.00 0.00 0.00 3.14
3510 6327 1.648116 ATGCCCTTGTTTTCCTGCAT 58.352 45.000 0.00 0.00 34.81 3.96
3511 6328 1.344114 GAATGCCCTTGTTTTCCTGCA 59.656 47.619 0.00 0.00 0.00 4.41
3512 6329 1.344114 TGAATGCCCTTGTTTTCCTGC 59.656 47.619 0.00 0.00 0.00 4.85
3513 6330 2.289010 GGTGAATGCCCTTGTTTTCCTG 60.289 50.000 0.00 0.00 0.00 3.86
3515 6332 1.970640 AGGTGAATGCCCTTGTTTTCC 59.029 47.619 0.00 0.00 0.00 3.13
3516 6333 4.864704 TTAGGTGAATGCCCTTGTTTTC 57.135 40.909 0.00 0.00 33.35 2.29
3517 6334 5.365314 TCTTTTAGGTGAATGCCCTTGTTTT 59.635 36.000 0.00 0.00 33.35 2.43
3518 6335 4.898861 TCTTTTAGGTGAATGCCCTTGTTT 59.101 37.500 0.00 0.00 33.35 2.83
3519 6336 4.479158 TCTTTTAGGTGAATGCCCTTGTT 58.521 39.130 0.00 0.00 33.35 2.83
3520 6337 4.112634 TCTTTTAGGTGAATGCCCTTGT 57.887 40.909 0.00 0.00 33.35 3.16
3521 6338 5.467035 TTTCTTTTAGGTGAATGCCCTTG 57.533 39.130 0.00 0.00 33.35 3.61
3522 6339 5.508994 CGTTTTCTTTTAGGTGAATGCCCTT 60.509 40.000 0.00 0.00 33.35 3.95
3523 6340 4.022329 CGTTTTCTTTTAGGTGAATGCCCT 60.022 41.667 0.00 0.00 36.04 5.19
3524 6341 4.022676 TCGTTTTCTTTTAGGTGAATGCCC 60.023 41.667 0.00 0.00 0.00 5.36
3525 6342 5.116069 TCGTTTTCTTTTAGGTGAATGCC 57.884 39.130 0.00 0.00 0.00 4.40
3526 6343 5.625311 CACTCGTTTTCTTTTAGGTGAATGC 59.375 40.000 0.00 0.00 0.00 3.56
3527 6344 5.625311 GCACTCGTTTTCTTTTAGGTGAATG 59.375 40.000 0.00 0.00 0.00 2.67
3528 6345 5.298276 TGCACTCGTTTTCTTTTAGGTGAAT 59.702 36.000 0.00 0.00 0.00 2.57
3529 6346 4.636648 TGCACTCGTTTTCTTTTAGGTGAA 59.363 37.500 0.00 0.00 0.00 3.18
3530 6347 4.193090 TGCACTCGTTTTCTTTTAGGTGA 58.807 39.130 0.00 0.00 0.00 4.02
3531 6348 4.545823 TGCACTCGTTTTCTTTTAGGTG 57.454 40.909 0.00 0.00 0.00 4.00
3532 6349 5.767816 AATGCACTCGTTTTCTTTTAGGT 57.232 34.783 0.00 0.00 0.00 3.08
3533 6350 6.581166 GGTAAATGCACTCGTTTTCTTTTAGG 59.419 38.462 0.00 0.00 33.73 2.69
3536 6353 5.068591 AGGGTAAATGCACTCGTTTTCTTTT 59.931 36.000 0.00 0.00 33.73 2.27
3564 6381 8.507470 AAGAAAGAAATATGCACTCGTTTTTC 57.493 30.769 0.00 0.00 32.70 2.29
3566 6383 8.871686 AAAAGAAAGAAATATGCACTCGTTTT 57.128 26.923 0.00 0.00 0.00 2.43
3595 6412 8.998989 CAAGCGAAATACACTTGTATTATGTTG 58.001 33.333 13.70 11.24 46.98 3.33
3611 6430 2.389962 ACTTACGGCCAAGCGAAATA 57.610 45.000 2.24 0.00 0.00 1.40
3616 6435 1.802365 AGTAAAACTTACGGCCAAGCG 59.198 47.619 2.24 0.00 0.00 4.68
3619 6438 2.372837 AGGGAGTAAAACTTACGGCCAA 59.627 45.455 2.24 0.00 0.00 4.52
3632 6451 1.732117 TTTTGGGTCGGAGGGAGTAA 58.268 50.000 0.00 0.00 0.00 2.24
3633 6452 1.961133 ATTTTGGGTCGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3634 6453 1.961133 TATTTTGGGTCGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3635 6454 2.238898 ACTTATTTTGGGTCGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3636 6455 2.026636 CACTTATTTTGGGTCGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3637 6456 2.365582 CACTTATTTTGGGTCGGAGGG 58.634 52.381 0.00 0.00 0.00 4.30
3638 6457 1.743394 GCACTTATTTTGGGTCGGAGG 59.257 52.381 0.00 0.00 0.00 4.30
3639 6458 1.743394 GGCACTTATTTTGGGTCGGAG 59.257 52.381 0.00 0.00 0.00 4.63
3640 6459 1.828979 GGCACTTATTTTGGGTCGGA 58.171 50.000 0.00 0.00 0.00 4.55
3641 6460 0.450184 CGGCACTTATTTTGGGTCGG 59.550 55.000 0.00 0.00 0.00 4.79
3642 6461 0.179174 GCGGCACTTATTTTGGGTCG 60.179 55.000 0.00 0.00 0.00 4.79
3643 6462 1.135402 CAGCGGCACTTATTTTGGGTC 60.135 52.381 1.45 0.00 0.00 4.46
3644 6463 0.887933 CAGCGGCACTTATTTTGGGT 59.112 50.000 1.45 0.00 0.00 4.51
3645 6464 1.173043 TCAGCGGCACTTATTTTGGG 58.827 50.000 1.45 0.00 0.00 4.12
3646 6465 3.508744 AATCAGCGGCACTTATTTTGG 57.491 42.857 1.45 0.00 0.00 3.28
3647 6466 5.640732 ACTAAATCAGCGGCACTTATTTTG 58.359 37.500 1.45 6.11 34.69 2.44
3648 6467 5.897377 ACTAAATCAGCGGCACTTATTTT 57.103 34.783 1.45 0.00 34.69 1.82
3649 6468 6.037172 CACTACTAAATCAGCGGCACTTATTT 59.963 38.462 1.45 5.10 36.43 1.40
3650 6469 5.523916 CACTACTAAATCAGCGGCACTTATT 59.476 40.000 1.45 0.00 0.00 1.40
3651 6470 5.050490 CACTACTAAATCAGCGGCACTTAT 58.950 41.667 1.45 0.00 0.00 1.73
3652 6471 4.430007 CACTACTAAATCAGCGGCACTTA 58.570 43.478 1.45 0.00 0.00 2.24
3653 6472 3.262420 CACTACTAAATCAGCGGCACTT 58.738 45.455 1.45 0.00 0.00 3.16
3654 6473 2.418746 CCACTACTAAATCAGCGGCACT 60.419 50.000 1.45 0.00 0.00 4.40
3655 6474 1.933853 CCACTACTAAATCAGCGGCAC 59.066 52.381 1.45 0.00 0.00 5.01
3656 6475 1.553248 ACCACTACTAAATCAGCGGCA 59.447 47.619 1.45 0.00 0.00 5.69
3657 6476 2.311124 ACCACTACTAAATCAGCGGC 57.689 50.000 0.00 0.00 0.00 6.53
3658 6477 4.038763 TCCATACCACTACTAAATCAGCGG 59.961 45.833 0.00 0.00 0.00 5.52
3659 6478 5.196341 TCCATACCACTACTAAATCAGCG 57.804 43.478 0.00 0.00 0.00 5.18
3660 6479 5.511545 CCCTCCATACCACTACTAAATCAGC 60.512 48.000 0.00 0.00 0.00 4.26
3661 6480 5.839063 TCCCTCCATACCACTACTAAATCAG 59.161 44.000 0.00 0.00 0.00 2.90
3662 6481 5.784023 TCCCTCCATACCACTACTAAATCA 58.216 41.667 0.00 0.00 0.00 2.57
3663 6482 5.839606 ACTCCCTCCATACCACTACTAAATC 59.160 44.000 0.00 0.00 0.00 2.17
3664 6483 5.789535 ACTCCCTCCATACCACTACTAAAT 58.210 41.667 0.00 0.00 0.00 1.40
3665 6484 5.216665 ACTCCCTCCATACCACTACTAAA 57.783 43.478 0.00 0.00 0.00 1.85
3666 6485 4.894252 ACTCCCTCCATACCACTACTAA 57.106 45.455 0.00 0.00 0.00 2.24
3667 6486 4.980342 AGTACTCCCTCCATACCACTACTA 59.020 45.833 0.00 0.00 0.00 1.82
3668 6487 3.792684 AGTACTCCCTCCATACCACTACT 59.207 47.826 0.00 0.00 0.00 2.57
3669 6488 4.181799 AGTACTCCCTCCATACCACTAC 57.818 50.000 0.00 0.00 0.00 2.73
3670 6489 5.999987 TTAGTACTCCCTCCATACCACTA 57.000 43.478 0.00 0.00 0.00 2.74
3671 6490 4.894252 TTAGTACTCCCTCCATACCACT 57.106 45.455 0.00 0.00 0.00 4.00
3672 6491 7.008941 TCTATTTAGTACTCCCTCCATACCAC 58.991 42.308 0.00 0.00 0.00 4.16
3673 6492 7.170554 TCTATTTAGTACTCCCTCCATACCA 57.829 40.000 0.00 0.00 0.00 3.25
3674 6493 8.532819 CAATCTATTTAGTACTCCCTCCATACC 58.467 40.741 0.00 0.00 0.00 2.73
3675 6494 9.091220 ACAATCTATTTAGTACTCCCTCCATAC 57.909 37.037 0.00 0.00 0.00 2.39
3677 6496 9.670442 TTACAATCTATTTAGTACTCCCTCCAT 57.330 33.333 0.00 0.00 0.00 3.41
3678 6497 9.496710 TTTACAATCTATTTAGTACTCCCTCCA 57.503 33.333 0.00 0.00 0.00 3.86
3679 6498 9.761504 GTTTACAATCTATTTAGTACTCCCTCC 57.238 37.037 0.00 0.00 0.00 4.30
3680 6499 9.761504 GGTTTACAATCTATTTAGTACTCCCTC 57.238 37.037 0.00 0.00 0.00 4.30
3681 6500 9.275572 TGGTTTACAATCTATTTAGTACTCCCT 57.724 33.333 0.00 0.00 0.00 4.20
3682 6501 9.543783 CTGGTTTACAATCTATTTAGTACTCCC 57.456 37.037 0.00 0.00 0.00 4.30
3683 6502 9.043079 GCTGGTTTACAATCTATTTAGTACTCC 57.957 37.037 0.00 0.00 0.00 3.85
3684 6503 9.595823 TGCTGGTTTACAATCTATTTAGTACTC 57.404 33.333 0.00 0.00 0.00 2.59
3685 6504 9.953565 TTGCTGGTTTACAATCTATTTAGTACT 57.046 29.630 0.00 0.00 0.00 2.73
3691 6510 8.860088 AGACTTTTGCTGGTTTACAATCTATTT 58.140 29.630 0.00 0.00 0.00 1.40
3692 6511 8.299570 CAGACTTTTGCTGGTTTACAATCTATT 58.700 33.333 0.00 0.00 0.00 1.73
3693 6512 7.094205 CCAGACTTTTGCTGGTTTACAATCTAT 60.094 37.037 0.00 0.00 46.19 1.98
3694 6513 6.206634 CCAGACTTTTGCTGGTTTACAATCTA 59.793 38.462 0.00 0.00 46.19 1.98
3695 6514 5.010012 CCAGACTTTTGCTGGTTTACAATCT 59.990 40.000 0.00 0.00 46.19 2.40
3696 6515 5.222631 CCAGACTTTTGCTGGTTTACAATC 58.777 41.667 0.00 0.00 46.19 2.67
3697 6516 5.200368 CCAGACTTTTGCTGGTTTACAAT 57.800 39.130 0.00 0.00 46.19 2.71
3698 6517 4.647424 CCAGACTTTTGCTGGTTTACAA 57.353 40.909 0.00 0.00 46.19 2.41
3706 6525 2.620115 TGAGCTTTCCAGACTTTTGCTG 59.380 45.455 0.00 0.00 0.00 4.41
3707 6526 2.883386 CTGAGCTTTCCAGACTTTTGCT 59.117 45.455 0.00 0.00 33.65 3.91
3708 6527 2.620585 ACTGAGCTTTCCAGACTTTTGC 59.379 45.455 7.84 0.00 35.69 3.68
3709 6528 4.907879 AACTGAGCTTTCCAGACTTTTG 57.092 40.909 7.84 0.00 35.69 2.44
3710 6529 5.921962 AAAACTGAGCTTTCCAGACTTTT 57.078 34.783 7.84 3.03 35.69 2.27
3711 6530 5.654497 CAAAAACTGAGCTTTCCAGACTTT 58.346 37.500 7.84 4.53 35.69 2.66
3712 6531 4.440663 GCAAAAACTGAGCTTTCCAGACTT 60.441 41.667 7.84 0.00 35.69 3.01
3713 6532 3.067320 GCAAAAACTGAGCTTTCCAGACT 59.933 43.478 7.84 0.00 35.69 3.24
3714 6533 3.181487 TGCAAAAACTGAGCTTTCCAGAC 60.181 43.478 7.84 0.00 35.69 3.51
3715 6534 3.023119 TGCAAAAACTGAGCTTTCCAGA 58.977 40.909 7.84 0.00 35.69 3.86
3716 6535 3.441496 TGCAAAAACTGAGCTTTCCAG 57.559 42.857 0.00 0.00 37.64 3.86
3717 6536 3.384146 TCATGCAAAAACTGAGCTTTCCA 59.616 39.130 0.00 0.00 0.00 3.53
3718 6537 3.981211 TCATGCAAAAACTGAGCTTTCC 58.019 40.909 0.00 0.00 0.00 3.13
3719 6538 4.387862 CCATCATGCAAAAACTGAGCTTTC 59.612 41.667 0.00 0.00 0.00 2.62
3720 6539 4.202284 ACCATCATGCAAAAACTGAGCTTT 60.202 37.500 0.00 0.00 0.00 3.51
3721 6540 3.322828 ACCATCATGCAAAAACTGAGCTT 59.677 39.130 0.00 0.00 0.00 3.74
3722 6541 2.895404 ACCATCATGCAAAAACTGAGCT 59.105 40.909 0.00 0.00 0.00 4.09
3723 6542 3.308438 ACCATCATGCAAAAACTGAGC 57.692 42.857 0.00 0.00 0.00 4.26
3724 6543 6.449698 ACTTAACCATCATGCAAAAACTGAG 58.550 36.000 0.00 0.00 0.00 3.35
3725 6544 6.403866 ACTTAACCATCATGCAAAAACTGA 57.596 33.333 0.00 0.00 0.00 3.41
3726 6545 7.481275 AAACTTAACCATCATGCAAAAACTG 57.519 32.000 0.00 0.00 0.00 3.16
3727 6546 7.042791 CGAAAACTTAACCATCATGCAAAAACT 60.043 33.333 0.00 0.00 0.00 2.66
3728 6547 7.043059 TCGAAAACTTAACCATCATGCAAAAAC 60.043 33.333 0.00 0.00 0.00 2.43
3729 6548 6.980978 TCGAAAACTTAACCATCATGCAAAAA 59.019 30.769 0.00 0.00 0.00 1.94
3730 6549 6.507900 TCGAAAACTTAACCATCATGCAAAA 58.492 32.000 0.00 0.00 0.00 2.44
3731 6550 6.078202 TCGAAAACTTAACCATCATGCAAA 57.922 33.333 0.00 0.00 0.00 3.68
3732 6551 5.697473 TCGAAAACTTAACCATCATGCAA 57.303 34.783 0.00 0.00 0.00 4.08
3733 6552 5.697473 TTCGAAAACTTAACCATCATGCA 57.303 34.783 0.00 0.00 0.00 3.96
3734 6553 7.328249 TGATTTTCGAAAACTTAACCATCATGC 59.672 33.333 24.68 1.58 0.00 4.06
3735 6554 8.741101 TGATTTTCGAAAACTTAACCATCATG 57.259 30.769 24.68 0.00 0.00 3.07
3742 6561 9.952341 GCCAATTATGATTTTCGAAAACTTAAC 57.048 29.630 24.68 13.84 0.00 2.01
3743 6562 9.698309 TGCCAATTATGATTTTCGAAAACTTAA 57.302 25.926 24.68 21.85 0.00 1.85
3744 6563 9.352784 CTGCCAATTATGATTTTCGAAAACTTA 57.647 29.630 24.68 14.23 0.00 2.24
3745 6564 7.148590 GCTGCCAATTATGATTTTCGAAAACTT 60.149 33.333 24.68 17.15 0.00 2.66
3746 6565 6.311200 GCTGCCAATTATGATTTTCGAAAACT 59.689 34.615 24.68 14.04 0.00 2.66
3747 6566 6.311200 AGCTGCCAATTATGATTTTCGAAAAC 59.689 34.615 24.68 17.85 0.00 2.43
3748 6567 6.310956 CAGCTGCCAATTATGATTTTCGAAAA 59.689 34.615 24.43 24.43 0.00 2.29
3749 6568 5.806502 CAGCTGCCAATTATGATTTTCGAAA 59.193 36.000 6.47 6.47 0.00 3.46
3750 6569 5.125257 TCAGCTGCCAATTATGATTTTCGAA 59.875 36.000 9.47 0.00 0.00 3.71
3751 6570 4.639755 TCAGCTGCCAATTATGATTTTCGA 59.360 37.500 9.47 0.00 0.00 3.71
3752 6571 4.923893 TCAGCTGCCAATTATGATTTTCG 58.076 39.130 9.47 0.00 0.00 3.46
3753 6572 6.039047 TCTCTCAGCTGCCAATTATGATTTTC 59.961 38.462 9.47 0.00 0.00 2.29
3754 6573 5.889853 TCTCTCAGCTGCCAATTATGATTTT 59.110 36.000 9.47 0.00 0.00 1.82
3755 6574 5.443283 TCTCTCAGCTGCCAATTATGATTT 58.557 37.500 9.47 0.00 0.00 2.17
3756 6575 5.045012 TCTCTCAGCTGCCAATTATGATT 57.955 39.130 9.47 0.00 0.00 2.57
3757 6576 4.505215 CCTCTCTCAGCTGCCAATTATGAT 60.505 45.833 9.47 0.00 0.00 2.45
3758 6577 3.181457 CCTCTCTCAGCTGCCAATTATGA 60.181 47.826 9.47 0.00 0.00 2.15
3759 6578 3.139850 CCTCTCTCAGCTGCCAATTATG 58.860 50.000 9.47 0.00 0.00 1.90
3760 6579 3.044156 TCCTCTCTCAGCTGCCAATTAT 58.956 45.455 9.47 0.00 0.00 1.28
3761 6580 2.470990 TCCTCTCTCAGCTGCCAATTA 58.529 47.619 9.47 0.00 0.00 1.40
3762 6581 1.283347 TCCTCTCTCAGCTGCCAATT 58.717 50.000 9.47 0.00 0.00 2.32
3763 6582 1.141254 CATCCTCTCTCAGCTGCCAAT 59.859 52.381 9.47 0.00 0.00 3.16
3764 6583 0.540454 CATCCTCTCTCAGCTGCCAA 59.460 55.000 9.47 0.00 0.00 4.52
3765 6584 1.335882 CCATCCTCTCTCAGCTGCCA 61.336 60.000 9.47 0.00 0.00 4.92
3766 6585 1.047596 TCCATCCTCTCTCAGCTGCC 61.048 60.000 9.47 0.00 0.00 4.85
3767 6586 0.829333 TTCCATCCTCTCTCAGCTGC 59.171 55.000 9.47 0.00 0.00 5.25
3768 6587 2.742530 GCTTTCCATCCTCTCTCAGCTG 60.743 54.545 7.63 7.63 0.00 4.24
3769 6588 1.485895 GCTTTCCATCCTCTCTCAGCT 59.514 52.381 0.00 0.00 0.00 4.24
3770 6589 1.209019 TGCTTTCCATCCTCTCTCAGC 59.791 52.381 0.00 0.00 0.00 4.26
3771 6590 3.623906 TTGCTTTCCATCCTCTCTCAG 57.376 47.619 0.00 0.00 0.00 3.35
3772 6591 4.581309 ATTTGCTTTCCATCCTCTCTCA 57.419 40.909 0.00 0.00 0.00 3.27
3773 6592 5.911378 AAATTTGCTTTCCATCCTCTCTC 57.089 39.130 0.00 0.00 0.00 3.20
3774 6593 7.968014 AATAAATTTGCTTTCCATCCTCTCT 57.032 32.000 0.00 0.00 0.00 3.10
3775 6594 8.907885 AGTAATAAATTTGCTTTCCATCCTCTC 58.092 33.333 0.00 0.00 0.00 3.20
3776 6595 8.689972 CAGTAATAAATTTGCTTTCCATCCTCT 58.310 33.333 0.00 0.00 0.00 3.69
3777 6596 7.922811 CCAGTAATAAATTTGCTTTCCATCCTC 59.077 37.037 0.00 0.00 0.00 3.71
3778 6597 7.619302 TCCAGTAATAAATTTGCTTTCCATCCT 59.381 33.333 0.00 0.00 0.00 3.24
3779 6598 7.706607 GTCCAGTAATAAATTTGCTTTCCATCC 59.293 37.037 0.00 0.00 0.00 3.51
3780 6599 8.250332 TGTCCAGTAATAAATTTGCTTTCCATC 58.750 33.333 0.00 0.00 0.00 3.51
3781 6600 8.133024 TGTCCAGTAATAAATTTGCTTTCCAT 57.867 30.769 0.00 0.00 0.00 3.41
3782 6601 7.531857 TGTCCAGTAATAAATTTGCTTTCCA 57.468 32.000 0.00 0.00 0.00 3.53
3783 6602 8.088365 AGTTGTCCAGTAATAAATTTGCTTTCC 58.912 33.333 0.00 0.00 0.00 3.13
3784 6603 9.476202 AAGTTGTCCAGTAATAAATTTGCTTTC 57.524 29.630 0.00 0.00 0.00 2.62
3785 6604 9.830975 AAAGTTGTCCAGTAATAAATTTGCTTT 57.169 25.926 0.00 0.00 0.00 3.51
3792 6611 9.975218 ACCAGATAAAGTTGTCCAGTAATAAAT 57.025 29.630 0.00 0.00 0.00 1.40
3793 6612 9.802039 AACCAGATAAAGTTGTCCAGTAATAAA 57.198 29.630 0.00 0.00 0.00 1.40
3794 6613 9.226606 CAACCAGATAAAGTTGTCCAGTAATAA 57.773 33.333 0.00 0.00 38.81 1.40
3795 6614 8.786826 CAACCAGATAAAGTTGTCCAGTAATA 57.213 34.615 0.00 0.00 38.81 0.98
3796 6615 7.687941 CAACCAGATAAAGTTGTCCAGTAAT 57.312 36.000 0.00 0.00 38.81 1.89
3812 6631 9.533831 AGGATTTGTAATTTTCTACAACCAGAT 57.466 29.630 0.00 0.00 40.59 2.90
3813 6632 8.792633 CAGGATTTGTAATTTTCTACAACCAGA 58.207 33.333 0.00 0.00 40.59 3.86
3814 6633 7.542130 GCAGGATTTGTAATTTTCTACAACCAG 59.458 37.037 0.00 0.00 40.59 4.00
3815 6634 7.232534 AGCAGGATTTGTAATTTTCTACAACCA 59.767 33.333 0.00 0.00 40.59 3.67
3816 6635 7.542130 CAGCAGGATTTGTAATTTTCTACAACC 59.458 37.037 0.00 0.00 40.59 3.77
3817 6636 8.082242 ACAGCAGGATTTGTAATTTTCTACAAC 58.918 33.333 0.00 0.00 40.59 3.32
3818 6637 8.177119 ACAGCAGGATTTGTAATTTTCTACAA 57.823 30.769 0.00 0.00 39.45 2.41
3819 6638 7.759489 ACAGCAGGATTTGTAATTTTCTACA 57.241 32.000 0.00 0.00 0.00 2.74
3824 6643 8.720562 GCAAATAACAGCAGGATTTGTAATTTT 58.279 29.630 15.40 0.00 40.89 1.82
3825 6644 7.334171 GGCAAATAACAGCAGGATTTGTAATTT 59.666 33.333 15.40 0.00 40.89 1.82
3826 6645 6.818142 GGCAAATAACAGCAGGATTTGTAATT 59.182 34.615 15.40 0.00 40.89 1.40
3827 6646 6.340522 GGCAAATAACAGCAGGATTTGTAAT 58.659 36.000 15.40 0.00 40.89 1.89
3828 6647 5.621104 CGGCAAATAACAGCAGGATTTGTAA 60.621 40.000 15.40 0.00 40.89 2.41
3829 6648 4.142491 CGGCAAATAACAGCAGGATTTGTA 60.142 41.667 15.40 0.00 40.89 2.41
3830 6649 3.367292 CGGCAAATAACAGCAGGATTTGT 60.367 43.478 15.40 0.00 40.89 2.83
3831 6650 3.181397 CGGCAAATAACAGCAGGATTTG 58.819 45.455 11.85 11.85 41.45 2.32
3832 6651 2.417243 GCGGCAAATAACAGCAGGATTT 60.417 45.455 0.00 0.00 0.00 2.17
3833 6652 1.134946 GCGGCAAATAACAGCAGGATT 59.865 47.619 0.00 0.00 0.00 3.01
3834 6653 0.740737 GCGGCAAATAACAGCAGGAT 59.259 50.000 0.00 0.00 0.00 3.24
3835 6654 0.607762 TGCGGCAAATAACAGCAGGA 60.608 50.000 0.00 0.00 33.57 3.86
3836 6655 0.243365 TTGCGGCAAATAACAGCAGG 59.757 50.000 13.93 0.00 39.11 4.85
3837 6656 2.063156 TTTGCGGCAAATAACAGCAG 57.937 45.000 23.23 0.00 39.11 4.24
3838 6657 2.515926 TTTTGCGGCAAATAACAGCA 57.484 40.000 26.87 9.13 33.19 4.41
3839 6658 4.152223 AGAAATTTTGCGGCAAATAACAGC 59.848 37.500 26.87 14.76 33.19 4.40
3840 6659 5.634859 AGAGAAATTTTGCGGCAAATAACAG 59.365 36.000 26.87 0.00 33.19 3.16
3841 6660 5.537188 AGAGAAATTTTGCGGCAAATAACA 58.463 33.333 26.87 13.80 33.19 2.41
3842 6661 6.401047 GGAAGAGAAATTTTGCGGCAAATAAC 60.401 38.462 26.87 17.83 33.19 1.89
3843 6662 5.637387 GGAAGAGAAATTTTGCGGCAAATAA 59.363 36.000 26.87 14.87 33.19 1.40
3844 6663 5.047377 AGGAAGAGAAATTTTGCGGCAAATA 60.047 36.000 26.87 17.93 33.19 1.40
3845 6664 3.996363 GGAAGAGAAATTTTGCGGCAAAT 59.004 39.130 26.87 13.86 33.19 2.32
3846 6665 3.069443 AGGAAGAGAAATTTTGCGGCAAA 59.931 39.130 23.23 23.23 0.00 3.68
3847 6666 2.627699 AGGAAGAGAAATTTTGCGGCAA 59.372 40.909 12.11 12.11 0.00 4.52
3848 6667 2.228822 GAGGAAGAGAAATTTTGCGGCA 59.771 45.455 0.00 0.00 0.00 5.69
3849 6668 2.489722 AGAGGAAGAGAAATTTTGCGGC 59.510 45.455 0.00 0.00 0.00 6.53
3850 6669 4.773323 AAGAGGAAGAGAAATTTTGCGG 57.227 40.909 0.00 0.00 0.00 5.69
3851 6670 6.241207 TGTAAGAGGAAGAGAAATTTTGCG 57.759 37.500 0.00 0.00 0.00 4.85
3852 6671 9.481340 AAATTGTAAGAGGAAGAGAAATTTTGC 57.519 29.630 0.00 0.00 0.00 3.68
3855 6674 9.971922 CACAAATTGTAAGAGGAAGAGAAATTT 57.028 29.630 0.00 0.00 0.00 1.82
3856 6675 9.136323 ACACAAATTGTAAGAGGAAGAGAAATT 57.864 29.630 0.00 0.00 36.32 1.82
3857 6676 8.571336 CACACAAATTGTAAGAGGAAGAGAAAT 58.429 33.333 0.00 0.00 35.67 2.17
3858 6677 7.556275 ACACACAAATTGTAAGAGGAAGAGAAA 59.444 33.333 0.00 0.00 35.67 2.52
3859 6678 7.054124 ACACACAAATTGTAAGAGGAAGAGAA 58.946 34.615 0.00 0.00 35.67 2.87
3860 6679 6.591935 ACACACAAATTGTAAGAGGAAGAGA 58.408 36.000 0.00 0.00 35.67 3.10
3861 6680 6.867662 ACACACAAATTGTAAGAGGAAGAG 57.132 37.500 0.00 0.00 35.67 2.85
3862 6681 7.556275 AGAAACACACAAATTGTAAGAGGAAGA 59.444 33.333 0.00 0.00 35.67 2.87
3863 6682 7.707104 AGAAACACACAAATTGTAAGAGGAAG 58.293 34.615 0.00 0.00 35.67 3.46
3864 6683 7.639113 AGAAACACACAAATTGTAAGAGGAA 57.361 32.000 0.00 0.00 35.67 3.36
3865 6684 8.740123 TTAGAAACACACAAATTGTAAGAGGA 57.260 30.769 0.00 0.00 35.67 3.71
3866 6685 9.450807 CTTTAGAAACACACAAATTGTAAGAGG 57.549 33.333 0.00 0.00 35.67 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.