Multiple sequence alignment - TraesCS5B01G219700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G219700 chr5B 100.000 3759 0 0 1 3759 393846379 393842621 0.000000e+00 6942
1 TraesCS5B01G219700 chr5B 99.725 364 1 0 3396 3759 670806238 670805875 0.000000e+00 667
2 TraesCS5B01G219700 chr5B 91.473 129 8 3 3399 3526 616949171 616949297 1.390000e-39 174
3 TraesCS5B01G219700 chr5B 90.769 130 12 0 3399 3528 706417162 706417033 1.390000e-39 174
4 TraesCS5B01G219700 chr5A 89.116 1470 100 30 1966 3388 437039918 437038462 0.000000e+00 1773
5 TraesCS5B01G219700 chr5A 90.536 634 41 10 1001 1619 437040883 437040254 0.000000e+00 821
6 TraesCS5B01G219700 chr5A 93.981 216 12 1 1690 1904 437040232 437040017 3.620000e-85 326
7 TraesCS5B01G219700 chr5A 79.796 490 33 17 437 902 437041670 437041223 2.840000e-76 296
8 TraesCS5B01G219700 chr5D 87.770 1341 77 34 2085 3400 335876577 335875299 0.000000e+00 1487
9 TraesCS5B01G219700 chr5D 84.122 1606 86 63 1 1512 335878578 335877048 0.000000e+00 1397
10 TraesCS5B01G219700 chr5D 87.927 381 32 9 1679 2052 335876950 335876577 1.600000e-118 436
11 TraesCS5B01G219700 chr1B 86.427 361 23 13 3399 3759 316604993 316605327 4.590000e-99 372
12 TraesCS5B01G219700 chr7A 84.680 359 29 9 3402 3759 383428831 383428498 6.020000e-88 335
13 TraesCS5B01G219700 chr3A 91.667 132 10 1 3393 3524 344980679 344980549 8.290000e-42 182
14 TraesCS5B01G219700 chr2A 92.063 126 9 1 3399 3523 484033531 484033656 3.860000e-40 176
15 TraesCS5B01G219700 chr2A 88.971 136 14 1 3392 3526 135273096 135273231 2.320000e-37 167
16 TraesCS5B01G219700 chr2D 89.706 136 14 0 3397 3532 630298496 630298361 1.390000e-39 174
17 TraesCS5B01G219700 chr3B 91.870 123 10 0 3399 3521 511025004 511025126 4.990000e-39 172
18 TraesCS5B01G219700 chrUn 89.381 113 4 3 547 659 271164346 271164450 6.550000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G219700 chr5B 393842621 393846379 3758 True 6942.000000 6942 100.000000 1 3759 1 chr5B.!!$R1 3758
1 TraesCS5B01G219700 chr5A 437038462 437041670 3208 True 804.000000 1773 88.357250 437 3388 4 chr5A.!!$R1 2951
2 TraesCS5B01G219700 chr5D 335875299 335878578 3279 True 1106.666667 1487 86.606333 1 3400 3 chr5D.!!$R1 3399

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
425 485 0.031585 GTGTAGGTGTGTGCACGAGA 59.968 55.0 13.13 0.00 46.13 4.04 F
1342 1681 0.174845 CCGCGGATTCAAGGAGTACA 59.825 55.0 24.07 0.00 0.00 2.90 F
1457 1796 0.241481 AAGTCGCTCGAGGACAAGAC 59.759 55.0 25.85 11.31 36.87 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1454 1793 0.243907 CATGAACTGGTCGACCGTCT 59.756 55.000 28.70 15.46 39.43 4.18 R
2184 2599 1.000274 GGTCTGGTTCCATGTTGCAAC 60.000 52.381 22.83 22.83 0.00 4.17 R
3416 3881 0.399806 GGATCTGCCCCTCTCTTCCT 60.400 60.000 0.00 0.00 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 7.255104 CCATTTATTATCGCTGCTTGGTTTAGA 60.255 37.037 0.00 0.00 0.00 2.10
41 42 7.801716 TTTATTATCGCTGCTTGGTTTAGAT 57.198 32.000 0.00 0.00 0.00 1.98
42 43 8.896320 TTTATTATCGCTGCTTGGTTTAGATA 57.104 30.769 0.00 0.00 0.00 1.98
43 44 8.534333 TTATTATCGCTGCTTGGTTTAGATAG 57.466 34.615 0.00 0.00 0.00 2.08
76 77 0.517316 GCGTGCCTTCTTGACGAAAT 59.483 50.000 0.00 0.00 35.05 2.17
83 84 3.810373 CCTTCTTGACGAAATCAAACCG 58.190 45.455 0.00 0.00 46.80 4.44
85 86 2.147958 TCTTGACGAAATCAAACCGGG 58.852 47.619 6.32 0.00 46.80 5.73
89 90 2.958576 GAAATCAAACCGGGCGCA 59.041 55.556 10.83 0.00 0.00 6.09
111 135 1.597445 CGAGCGAGAGGGAAATCGTAC 60.597 57.143 0.00 0.00 40.97 3.67
115 139 2.877168 GCGAGAGGGAAATCGTACTAGA 59.123 50.000 0.00 0.00 40.97 2.43
116 140 3.314635 GCGAGAGGGAAATCGTACTAGAA 59.685 47.826 0.00 0.00 40.97 2.10
136 160 1.296056 CTACCAAACGCCACTTCCCG 61.296 60.000 0.00 0.00 0.00 5.14
140 164 4.555709 AACGCCACTTCCCGCACA 62.556 61.111 0.00 0.00 0.00 4.57
148 172 4.228567 TTCCCGCACACGCACTGA 62.229 61.111 0.00 0.00 38.40 3.41
164 189 0.868406 CTGAAACCTCGTGCCACTTC 59.132 55.000 0.00 0.00 0.00 3.01
175 200 3.342627 CCACTTCGACGCGGCAAA 61.343 61.111 14.85 0.00 0.00 3.68
200 226 0.110486 ACAAGTCAAACCCGCCATCT 59.890 50.000 0.00 0.00 0.00 2.90
233 277 4.766375 ACCTTTTTCGACCGATGTGATAT 58.234 39.130 0.00 0.00 0.00 1.63
250 301 6.859017 TGTGATATGTTTTGCTCTCGTACTA 58.141 36.000 0.00 0.00 0.00 1.82
251 302 6.972901 TGTGATATGTTTTGCTCTCGTACTAG 59.027 38.462 0.00 0.00 0.00 2.57
252 303 6.973474 GTGATATGTTTTGCTCTCGTACTAGT 59.027 38.462 0.00 0.00 0.00 2.57
253 304 8.127327 GTGATATGTTTTGCTCTCGTACTAGTA 58.873 37.037 0.00 0.00 0.00 1.82
254 305 8.343366 TGATATGTTTTGCTCTCGTACTAGTAG 58.657 37.037 1.87 0.00 0.00 2.57
255 306 5.954296 TGTTTTGCTCTCGTACTAGTAGT 57.046 39.130 8.14 8.14 0.00 2.73
256 307 7.621428 ATGTTTTGCTCTCGTACTAGTAGTA 57.379 36.000 5.90 5.90 0.00 1.82
279 330 1.135915 ACTAGAGCTGACGCAGAATGG 59.864 52.381 10.46 1.33 39.10 3.16
287 338 1.134530 GACGCAGAATGGAGTCGTCG 61.135 60.000 0.00 0.00 39.76 5.12
302 358 4.768583 AGTCGTCGGTAGTTAGATCTCTT 58.231 43.478 0.00 0.00 0.00 2.85
303 359 4.571580 AGTCGTCGGTAGTTAGATCTCTTG 59.428 45.833 0.00 0.00 0.00 3.02
342 400 6.819397 ACAAGAAAAATACTACCTCTTGGC 57.181 37.500 13.09 0.00 44.67 4.52
374 432 3.132863 GGCGACGGTGTATTTCAGT 57.867 52.632 0.00 0.00 0.00 3.41
375 433 2.282701 GGCGACGGTGTATTTCAGTA 57.717 50.000 0.00 0.00 0.00 2.74
376 434 2.190981 GGCGACGGTGTATTTCAGTAG 58.809 52.381 0.00 0.00 0.00 2.57
377 435 1.587034 GCGACGGTGTATTTCAGTAGC 59.413 52.381 0.00 0.00 0.00 3.58
379 437 3.444916 CGACGGTGTATTTCAGTAGCAT 58.555 45.455 0.00 0.00 0.00 3.79
390 450 4.994907 TTCAGTAGCATATACGTGGTGT 57.005 40.909 0.00 0.00 0.00 4.16
393 453 3.796717 CAGTAGCATATACGTGGTGTGTG 59.203 47.826 0.00 0.00 0.00 3.82
395 455 2.616960 AGCATATACGTGGTGTGTGTG 58.383 47.619 0.00 0.00 34.58 3.82
396 456 2.028476 AGCATATACGTGGTGTGTGTGT 60.028 45.455 0.00 0.00 34.09 3.72
398 458 3.322369 CATATACGTGGTGTGTGTGTGT 58.678 45.455 0.00 0.00 0.00 3.72
404 464 0.250510 TGGTGTGTGTGTGTGTGTGT 60.251 50.000 0.00 0.00 0.00 3.72
405 465 1.002087 TGGTGTGTGTGTGTGTGTGTA 59.998 47.619 0.00 0.00 0.00 2.90
406 466 1.663643 GGTGTGTGTGTGTGTGTGTAG 59.336 52.381 0.00 0.00 0.00 2.74
408 468 2.093625 GTGTGTGTGTGTGTGTGTAGTG 59.906 50.000 0.00 0.00 0.00 2.74
409 469 2.289133 TGTGTGTGTGTGTGTGTAGTGT 60.289 45.455 0.00 0.00 0.00 3.55
410 470 3.056749 TGTGTGTGTGTGTGTGTAGTGTA 60.057 43.478 0.00 0.00 0.00 2.90
411 471 3.550275 GTGTGTGTGTGTGTGTAGTGTAG 59.450 47.826 0.00 0.00 0.00 2.74
412 472 3.120792 GTGTGTGTGTGTGTAGTGTAGG 58.879 50.000 0.00 0.00 0.00 3.18
413 473 2.761767 TGTGTGTGTGTGTAGTGTAGGT 59.238 45.455 0.00 0.00 0.00 3.08
414 474 3.120792 GTGTGTGTGTGTAGTGTAGGTG 58.879 50.000 0.00 0.00 0.00 4.00
415 475 2.761767 TGTGTGTGTGTAGTGTAGGTGT 59.238 45.455 0.00 0.00 0.00 4.16
416 476 3.120792 GTGTGTGTGTAGTGTAGGTGTG 58.879 50.000 0.00 0.00 0.00 3.82
417 477 2.761767 TGTGTGTGTAGTGTAGGTGTGT 59.238 45.455 0.00 0.00 0.00 3.72
418 478 3.120792 GTGTGTGTAGTGTAGGTGTGTG 58.879 50.000 0.00 0.00 0.00 3.82
419 479 2.132762 GTGTGTAGTGTAGGTGTGTGC 58.867 52.381 0.00 0.00 0.00 4.57
420 480 1.757699 TGTGTAGTGTAGGTGTGTGCA 59.242 47.619 0.00 0.00 0.00 4.57
421 481 2.132762 GTGTAGTGTAGGTGTGTGCAC 58.867 52.381 10.75 10.75 44.53 4.57
422 482 1.269361 TGTAGTGTAGGTGTGTGCACG 60.269 52.381 13.13 0.00 46.13 5.34
423 483 1.001048 GTAGTGTAGGTGTGTGCACGA 60.001 52.381 13.13 0.00 46.13 4.35
424 484 0.032130 AGTGTAGGTGTGTGCACGAG 59.968 55.000 13.13 0.00 46.13 4.18
425 485 0.031585 GTGTAGGTGTGTGCACGAGA 59.968 55.000 13.13 0.00 46.13 4.04
426 486 0.313987 TGTAGGTGTGTGCACGAGAG 59.686 55.000 13.13 0.00 46.13 3.20
427 487 0.596577 GTAGGTGTGTGCACGAGAGA 59.403 55.000 13.13 0.00 46.13 3.10
428 488 0.881796 TAGGTGTGTGCACGAGAGAG 59.118 55.000 13.13 0.00 46.13 3.20
429 489 1.373497 GGTGTGTGCACGAGAGAGG 60.373 63.158 13.13 0.00 46.13 3.69
430 490 2.024319 GTGTGTGCACGAGAGAGGC 61.024 63.158 13.13 0.00 35.75 4.70
431 491 2.433318 GTGTGCACGAGAGAGGCC 60.433 66.667 13.13 0.00 34.87 5.19
432 492 4.056125 TGTGCACGAGAGAGGCCG 62.056 66.667 13.13 0.00 34.87 6.13
433 493 4.803426 GTGCACGAGAGAGGCCGG 62.803 72.222 0.00 0.00 34.87 6.13
435 495 3.760035 GCACGAGAGAGGCCGGAA 61.760 66.667 5.05 0.00 0.00 4.30
494 554 5.061311 ACATTTCGTTATCGTTACCAAGTCG 59.939 40.000 0.00 0.00 38.33 4.18
495 555 3.135414 TCGTTATCGTTACCAAGTCGG 57.865 47.619 0.00 0.00 38.45 4.79
498 558 0.461135 TATCGTTACCAAGTCGGGGC 59.539 55.000 0.00 0.00 40.22 5.80
499 559 2.248086 ATCGTTACCAAGTCGGGGCC 62.248 60.000 0.00 0.00 40.22 5.80
500 560 2.045634 GTTACCAAGTCGGGGCCC 60.046 66.667 15.76 15.76 40.22 5.80
501 561 2.204029 TTACCAAGTCGGGGCCCT 60.204 61.111 24.38 0.00 40.22 5.19
540 609 1.388093 CGCGTGATCTGAAGAACAGTG 59.612 52.381 0.00 0.00 45.86 3.66
550 619 0.834687 AAGAACAGTGGCGTCCCCTA 60.835 55.000 0.00 0.00 0.00 3.53
553 622 1.483415 GAACAGTGGCGTCCCCTAATA 59.517 52.381 0.00 0.00 0.00 0.98
561 630 1.949465 CGTCCCCTAATAGCCACAAC 58.051 55.000 0.00 0.00 0.00 3.32
563 632 1.844497 GTCCCCTAATAGCCACAACCT 59.156 52.381 0.00 0.00 0.00 3.50
596 672 2.711922 CCCTTCGTCGAGACCCTGG 61.712 68.421 0.00 0.00 0.00 4.45
597 673 1.677966 CCTTCGTCGAGACCCTGGA 60.678 63.158 0.00 0.00 0.00 3.86
598 674 1.658686 CCTTCGTCGAGACCCTGGAG 61.659 65.000 0.00 0.00 0.00 3.86
599 675 0.677098 CTTCGTCGAGACCCTGGAGA 60.677 60.000 0.00 0.00 0.00 3.71
600 676 0.251033 TTCGTCGAGACCCTGGAGAA 60.251 55.000 0.00 0.00 0.00 2.87
601 677 0.677098 TCGTCGAGACCCTGGAGAAG 60.677 60.000 0.00 0.00 0.00 2.85
602 678 1.658686 CGTCGAGACCCTGGAGAAGG 61.659 65.000 0.00 0.00 46.94 3.46
777 867 1.134438 AAGAACTTTCCTCCCGCCCT 61.134 55.000 0.00 0.00 0.00 5.19
806 896 2.906897 CCCGGCCCAATCCAATCG 60.907 66.667 0.00 0.00 0.00 3.34
879 977 4.643334 CACATCATCACACAATTCCCAGAT 59.357 41.667 0.00 0.00 0.00 2.90
969 1074 3.283684 CCAAGAAACCGCACGCCA 61.284 61.111 0.00 0.00 0.00 5.69
970 1075 2.051345 CAAGAAACCGCACGCCAC 60.051 61.111 0.00 0.00 0.00 5.01
1011 1350 2.124736 GCCAAGATGGTGCGGCTA 60.125 61.111 0.00 0.00 40.46 3.93
1021 1360 3.047280 TGCGGCTAAGCAACACGG 61.047 61.111 0.00 0.00 45.06 4.94
1041 1380 1.661821 GATCGGGATCCTGAACGCG 60.662 63.158 27.03 13.17 42.22 6.01
1044 1383 2.511600 GGGATCCTGAACGCGGTG 60.512 66.667 12.47 0.00 0.00 4.94
1053 1392 2.027625 GAACGCGGTGACCTTCCTG 61.028 63.158 12.47 0.00 0.00 3.86
1342 1681 0.174845 CCGCGGATTCAAGGAGTACA 59.825 55.000 24.07 0.00 0.00 2.90
1361 1700 1.684734 GGCTCGGGGACTACTCCAA 60.685 63.158 0.00 0.00 38.52 3.53
1373 1712 1.002430 CTACTCCAACTGGCTGCAGAA 59.998 52.381 20.43 3.26 34.44 3.02
1391 1730 2.029964 GCGGGTGGAGAACGACAA 59.970 61.111 0.00 0.00 0.00 3.18
1454 1793 1.372997 GCAAGTCGCTCGAGGACAA 60.373 57.895 25.85 0.00 36.87 3.18
1457 1796 0.241481 AAGTCGCTCGAGGACAAGAC 59.759 55.000 25.85 11.31 36.87 3.01
1504 1849 2.785857 CTCTCCCCCATCCAGGTAATTT 59.214 50.000 0.00 0.00 34.66 1.82
1513 1858 5.163416 CCCATCCAGGTAATTTCATTTCACC 60.163 44.000 0.00 0.00 34.66 4.02
1532 1877 1.488261 CGCCGATTCGCCTTCTTACC 61.488 60.000 0.00 0.00 0.00 2.85
1534 1879 1.571919 CCGATTCGCCTTCTTACCTG 58.428 55.000 0.00 0.00 0.00 4.00
1535 1880 1.571919 CGATTCGCCTTCTTACCTGG 58.428 55.000 0.00 0.00 0.00 4.45
1536 1881 1.806623 CGATTCGCCTTCTTACCTGGG 60.807 57.143 0.00 0.00 0.00 4.45
1539 1886 1.188863 TCGCCTTCTTACCTGGGTAC 58.811 55.000 0.00 0.00 0.00 3.34
1541 1888 2.025037 TCGCCTTCTTACCTGGGTACTA 60.025 50.000 0.00 0.00 0.00 1.82
1554 1901 5.253096 ACCTGGGTACTATTCTTGTCCATTT 59.747 40.000 0.00 0.00 0.00 2.32
1590 1942 4.585879 TCTGACAATAACAAACCTAGGCC 58.414 43.478 9.30 0.00 0.00 5.19
1597 1949 7.781056 ACAATAACAAACCTAGGCCAAATATG 58.219 34.615 9.30 2.42 0.00 1.78
1598 1950 4.736126 AACAAACCTAGGCCAAATATGC 57.264 40.909 9.30 0.00 0.00 3.14
1621 1973 5.237996 GCTTGATGATCCGAGATGAATTTGA 59.762 40.000 0.00 0.00 0.00 2.69
1625 1977 9.511272 TTGATGATCCGAGATGAATTTGATTAT 57.489 29.630 0.00 0.00 0.00 1.28
1656 2008 9.979897 TGAGTAGGACTAGTACTTAATTTACCA 57.020 33.333 14.24 2.24 30.60 3.25
1659 2011 9.978044 GTAGGACTAGTACTTAATTTACCATGG 57.022 37.037 14.24 11.19 0.00 3.66
1660 2012 8.849543 AGGACTAGTACTTAATTTACCATGGA 57.150 34.615 21.47 0.00 0.00 3.41
1661 2013 9.448587 AGGACTAGTACTTAATTTACCATGGAT 57.551 33.333 21.47 5.32 0.00 3.41
1777 2140 5.219468 AGGATAAGATATAGCTCCTGCCT 57.781 43.478 0.00 0.00 40.80 4.75
1803 2166 6.152932 AGTCAACAAATTGCAGTTTGAGAT 57.847 33.333 33.32 19.27 40.64 2.75
1939 2343 6.708285 ACGATAATCAACTAGTCCCAACTTT 58.292 36.000 0.00 0.00 36.92 2.66
1948 2352 9.317827 TCAACTAGTCCCAACTTTATTAGTACT 57.682 33.333 0.00 0.00 35.54 2.73
1949 2353 9.367444 CAACTAGTCCCAACTTTATTAGTACTG 57.633 37.037 5.39 0.00 35.54 2.74
1952 2356 7.017319 AGTCCCAACTTTATTAGTACTGCTT 57.983 36.000 5.39 0.00 35.54 3.91
2022 2434 1.670811 ACTGCAGACCAACGTTTTGAG 59.329 47.619 23.35 0.00 34.24 3.02
2023 2435 1.002468 CTGCAGACCAACGTTTTGAGG 60.002 52.381 8.42 0.00 34.24 3.86
2040 2455 3.270027 TGAGGAGCAATGTTTGATACGG 58.730 45.455 0.00 0.00 34.36 4.02
2060 2475 2.109181 CTCCCGATTTCCGAGGGC 59.891 66.667 0.00 0.00 44.70 5.19
2095 2510 1.488527 GGCGATACTGTCAACGGATC 58.511 55.000 0.00 0.00 0.00 3.36
2118 2533 5.755375 TCGCTCCTGATTCATAGTGATTTTC 59.245 40.000 7.83 0.00 0.00 2.29
2123 2538 7.632861 TCCTGATTCATAGTGATTTTCCTTCA 58.367 34.615 0.00 0.00 0.00 3.02
2125 2540 8.742777 CCTGATTCATAGTGATTTTCCTTCAAA 58.257 33.333 0.00 0.00 0.00 2.69
2184 2599 1.263217 CTTTCCAAACGTTCTGACCGG 59.737 52.381 0.00 0.00 0.00 5.28
2192 2607 1.433053 CGTTCTGACCGGTTGCAACA 61.433 55.000 29.55 9.13 0.00 3.33
2239 2661 0.247736 ACACCTCCATCTCAACGCTC 59.752 55.000 0.00 0.00 0.00 5.03
2294 2716 0.877071 CGCACAATTCAACTGCTCCT 59.123 50.000 0.00 0.00 0.00 3.69
2304 2726 3.149196 TCAACTGCTCCTTGACCAAATC 58.851 45.455 0.00 0.00 0.00 2.17
2338 2760 9.905713 TCTATAAGAAAAATTGAGGCATGTAGT 57.094 29.630 0.00 0.00 0.00 2.73
2341 2763 6.759497 AGAAAAATTGAGGCATGTAGTACC 57.241 37.500 0.00 0.00 0.00 3.34
2343 2765 6.891908 AGAAAAATTGAGGCATGTAGTACCAT 59.108 34.615 0.00 0.00 0.00 3.55
2344 2766 7.397192 AGAAAAATTGAGGCATGTAGTACCATT 59.603 33.333 0.00 0.00 0.00 3.16
2345 2767 6.455360 AAATTGAGGCATGTAGTACCATTG 57.545 37.500 0.00 0.00 0.00 2.82
2347 2769 4.835284 TGAGGCATGTAGTACCATTGAA 57.165 40.909 0.00 0.00 0.00 2.69
2492 2919 0.319211 CGGCTTCACCTACGTCAACA 60.319 55.000 0.00 0.00 35.61 3.33
2500 2927 1.218875 CCTACGTCAACAGCACGCAA 61.219 55.000 0.00 0.00 41.10 4.85
2505 2932 0.385974 GTCAACAGCACGCAATGGAC 60.386 55.000 0.00 0.00 0.00 4.02
2617 3047 3.064324 GCCACCCTCAAGCGCAAT 61.064 61.111 11.47 0.00 0.00 3.56
2663 3093 2.433436 TCGTCTTCCTCGTCTTCATCA 58.567 47.619 0.00 0.00 0.00 3.07
2668 3098 5.355596 GTCTTCCTCGTCTTCATCATCATT 58.644 41.667 0.00 0.00 0.00 2.57
2815 3254 1.588404 GATGCGATCGTCGTGTCATTT 59.412 47.619 17.81 0.00 42.81 2.32
2891 3334 6.157904 CGAGATTATTCTGTGCTCTGATCAT 58.842 40.000 0.00 0.00 30.30 2.45
2906 3349 7.229707 TGCTCTGATCATCTACTAGTTAGGTTC 59.770 40.741 0.00 0.00 0.00 3.62
2907 3350 7.447238 GCTCTGATCATCTACTAGTTAGGTTCT 59.553 40.741 0.00 0.00 0.00 3.01
2943 3386 7.324178 GTCATGAGGAGGGTTGTGTATATATC 58.676 42.308 0.00 0.00 0.00 1.63
3054 3506 7.669427 TGTCCATTTTTCTAATTGAACTGCAT 58.331 30.769 0.00 0.00 33.88 3.96
3068 3520 5.214417 TGAACTGCATCTTTGATTGTTTCG 58.786 37.500 0.00 0.00 0.00 3.46
3070 3522 2.919229 CTGCATCTTTGATTGTTTCGCC 59.081 45.455 0.00 0.00 0.00 5.54
3191 3656 2.851195 ACTGTCCACCTGAACATCAAC 58.149 47.619 0.00 0.00 0.00 3.18
3215 3680 8.532977 ACTGTTTTAAATGGTTGATGTATTGC 57.467 30.769 0.00 0.00 0.00 3.56
3216 3681 8.367156 ACTGTTTTAAATGGTTGATGTATTGCT 58.633 29.630 0.00 0.00 0.00 3.91
3268 3733 6.311200 GCTGTACATGCCCTTTGATTTTTAAG 59.689 38.462 0.00 0.00 0.00 1.85
3307 3772 3.430790 GGCTGTATTTTTCCAAGATGGCC 60.431 47.826 0.00 0.00 37.47 5.36
3314 3779 6.686484 ATTTTTCCAAGATGGCCTTTAAGT 57.314 33.333 3.32 0.00 37.47 2.24
3370 3835 4.157840 GTGTCACCTTCACTTTCTTGGTTT 59.842 41.667 0.00 0.00 33.59 3.27
3388 3853 1.180456 TTCTCCGGCGTGTCACCTAA 61.180 55.000 6.01 0.00 0.00 2.69
3391 3856 0.108520 TCCGGCGTGTCACCTAAATC 60.109 55.000 6.01 0.00 0.00 2.17
3400 3865 5.671329 GCGTGTCACCTAAATCTTGTTCATC 60.671 44.000 0.00 0.00 0.00 2.92
3401 3866 5.639506 CGTGTCACCTAAATCTTGTTCATCT 59.360 40.000 0.00 0.00 0.00 2.90
3402 3867 6.811665 CGTGTCACCTAAATCTTGTTCATCTA 59.188 38.462 0.00 0.00 0.00 1.98
3403 3868 7.201444 CGTGTCACCTAAATCTTGTTCATCTAC 60.201 40.741 0.00 0.00 0.00 2.59
3404 3869 7.819900 GTGTCACCTAAATCTTGTTCATCTACT 59.180 37.037 0.00 0.00 0.00 2.57
3405 3870 9.031537 TGTCACCTAAATCTTGTTCATCTACTA 57.968 33.333 0.00 0.00 0.00 1.82
3406 3871 9.303537 GTCACCTAAATCTTGTTCATCTACTAC 57.696 37.037 0.00 0.00 0.00 2.73
3407 3872 8.475639 TCACCTAAATCTTGTTCATCTACTACC 58.524 37.037 0.00 0.00 0.00 3.18
3408 3873 8.258007 CACCTAAATCTTGTTCATCTACTACCA 58.742 37.037 0.00 0.00 0.00 3.25
3409 3874 8.258708 ACCTAAATCTTGTTCATCTACTACCAC 58.741 37.037 0.00 0.00 0.00 4.16
3410 3875 8.478877 CCTAAATCTTGTTCATCTACTACCACT 58.521 37.037 0.00 0.00 0.00 4.00
3419 3884 9.483489 TGTTCATCTACTACCACTATAAAAGGA 57.517 33.333 0.00 0.00 0.00 3.36
3422 3887 9.931698 TCATCTACTACCACTATAAAAGGAAGA 57.068 33.333 0.00 0.00 0.00 2.87
3425 3890 9.629878 TCTACTACCACTATAAAAGGAAGAGAG 57.370 37.037 0.00 0.00 0.00 3.20
3426 3891 7.663043 ACTACCACTATAAAAGGAAGAGAGG 57.337 40.000 0.00 0.00 0.00 3.69
3427 3892 5.959583 ACCACTATAAAAGGAAGAGAGGG 57.040 43.478 0.00 0.00 0.00 4.30
3428 3893 4.722279 ACCACTATAAAAGGAAGAGAGGGG 59.278 45.833 0.00 0.00 0.00 4.79
3429 3894 4.445019 CCACTATAAAAGGAAGAGAGGGGC 60.445 50.000 0.00 0.00 0.00 5.80
3430 3895 4.164221 CACTATAAAAGGAAGAGAGGGGCA 59.836 45.833 0.00 0.00 0.00 5.36
3431 3896 3.941704 ATAAAAGGAAGAGAGGGGCAG 57.058 47.619 0.00 0.00 0.00 4.85
3432 3897 1.747444 AAAAGGAAGAGAGGGGCAGA 58.253 50.000 0.00 0.00 0.00 4.26
3433 3898 1.978361 AAAGGAAGAGAGGGGCAGAT 58.022 50.000 0.00 0.00 0.00 2.90
3434 3899 1.506025 AAGGAAGAGAGGGGCAGATC 58.494 55.000 0.00 0.00 0.00 2.75
3435 3900 0.399806 AGGAAGAGAGGGGCAGATCC 60.400 60.000 0.00 0.00 0.00 3.36
3436 3901 0.692419 GGAAGAGAGGGGCAGATCCA 60.692 60.000 0.00 0.00 36.21 3.41
3437 3902 1.207791 GAAGAGAGGGGCAGATCCAA 58.792 55.000 0.00 0.00 36.21 3.53
3438 3903 1.561542 GAAGAGAGGGGCAGATCCAAA 59.438 52.381 0.00 0.00 36.21 3.28
3439 3904 0.915364 AGAGAGGGGCAGATCCAAAC 59.085 55.000 0.00 0.00 36.21 2.93
3440 3905 0.620556 GAGAGGGGCAGATCCAAACA 59.379 55.000 0.00 0.00 36.21 2.83
3441 3906 1.004745 GAGAGGGGCAGATCCAAACAA 59.995 52.381 0.00 0.00 36.21 2.83
3442 3907 1.642762 AGAGGGGCAGATCCAAACAAT 59.357 47.619 0.00 0.00 36.21 2.71
3443 3908 2.027385 GAGGGGCAGATCCAAACAATC 58.973 52.381 0.00 0.00 36.21 2.67
3444 3909 1.358787 AGGGGCAGATCCAAACAATCA 59.641 47.619 0.00 0.00 36.21 2.57
3445 3910 1.478105 GGGGCAGATCCAAACAATCAC 59.522 52.381 0.00 0.00 36.21 3.06
3446 3911 2.170166 GGGCAGATCCAAACAATCACA 58.830 47.619 0.00 0.00 36.21 3.58
3447 3912 2.762327 GGGCAGATCCAAACAATCACAT 59.238 45.455 0.00 0.00 36.21 3.21
3448 3913 3.181483 GGGCAGATCCAAACAATCACATC 60.181 47.826 0.00 0.00 36.21 3.06
3449 3914 3.181483 GGCAGATCCAAACAATCACATCC 60.181 47.826 0.00 0.00 34.01 3.51
3450 3915 3.444742 GCAGATCCAAACAATCACATCCA 59.555 43.478 0.00 0.00 0.00 3.41
3451 3916 4.098960 GCAGATCCAAACAATCACATCCAT 59.901 41.667 0.00 0.00 0.00 3.41
3452 3917 5.735354 GCAGATCCAAACAATCACATCCATC 60.735 44.000 0.00 0.00 0.00 3.51
3453 3918 5.358725 CAGATCCAAACAATCACATCCATCA 59.641 40.000 0.00 0.00 0.00 3.07
3454 3919 5.953548 AGATCCAAACAATCACATCCATCAA 59.046 36.000 0.00 0.00 0.00 2.57
3455 3920 6.610020 AGATCCAAACAATCACATCCATCAAT 59.390 34.615 0.00 0.00 0.00 2.57
3456 3921 6.211587 TCCAAACAATCACATCCATCAATC 57.788 37.500 0.00 0.00 0.00 2.67
3457 3922 5.038683 CCAAACAATCACATCCATCAATCG 58.961 41.667 0.00 0.00 0.00 3.34
3458 3923 5.393352 CCAAACAATCACATCCATCAATCGT 60.393 40.000 0.00 0.00 0.00 3.73
3459 3924 5.490139 AACAATCACATCCATCAATCGTC 57.510 39.130 0.00 0.00 0.00 4.20
3460 3925 4.516323 ACAATCACATCCATCAATCGTCA 58.484 39.130 0.00 0.00 0.00 4.35
3461 3926 4.943093 ACAATCACATCCATCAATCGTCAA 59.057 37.500 0.00 0.00 0.00 3.18
3462 3927 5.065602 ACAATCACATCCATCAATCGTCAAG 59.934 40.000 0.00 0.00 0.00 3.02
3463 3928 4.470334 TCACATCCATCAATCGTCAAGA 57.530 40.909 0.00 0.00 0.00 3.02
3464 3929 5.027293 TCACATCCATCAATCGTCAAGAT 57.973 39.130 0.00 0.00 42.43 2.40
3465 3930 5.052481 TCACATCCATCAATCGTCAAGATC 58.948 41.667 0.00 0.00 38.98 2.75
3466 3931 5.055144 CACATCCATCAATCGTCAAGATCT 58.945 41.667 0.00 0.00 38.98 2.75
3467 3932 6.040842 TCACATCCATCAATCGTCAAGATCTA 59.959 38.462 0.00 0.00 38.98 1.98
3468 3933 6.703165 CACATCCATCAATCGTCAAGATCTAA 59.297 38.462 0.00 0.00 38.98 2.10
3469 3934 7.387122 CACATCCATCAATCGTCAAGATCTAAT 59.613 37.037 0.00 0.00 38.98 1.73
3470 3935 7.387122 ACATCCATCAATCGTCAAGATCTAATG 59.613 37.037 0.00 0.00 38.98 1.90
3471 3936 6.226052 TCCATCAATCGTCAAGATCTAATGG 58.774 40.000 0.00 0.00 40.38 3.16
3472 3937 5.106791 CCATCAATCGTCAAGATCTAATGGC 60.107 44.000 0.00 0.00 38.98 4.40
3473 3938 4.380531 TCAATCGTCAAGATCTAATGGCC 58.619 43.478 0.00 0.00 38.98 5.36
3474 3939 2.910688 TCGTCAAGATCTAATGGCCC 57.089 50.000 0.00 0.00 0.00 5.80
3475 3940 2.398588 TCGTCAAGATCTAATGGCCCT 58.601 47.619 0.00 0.00 0.00 5.19
3476 3941 2.771943 TCGTCAAGATCTAATGGCCCTT 59.228 45.455 0.00 0.00 0.00 3.95
3477 3942 3.964688 TCGTCAAGATCTAATGGCCCTTA 59.035 43.478 0.00 0.00 0.00 2.69
3478 3943 4.407621 TCGTCAAGATCTAATGGCCCTTAA 59.592 41.667 0.00 0.00 0.00 1.85
3479 3944 5.071788 TCGTCAAGATCTAATGGCCCTTAAT 59.928 40.000 0.00 0.00 0.00 1.40
3480 3945 5.765182 CGTCAAGATCTAATGGCCCTTAATT 59.235 40.000 0.00 0.00 0.00 1.40
3481 3946 6.073003 CGTCAAGATCTAATGGCCCTTAATTC 60.073 42.308 0.00 1.02 0.00 2.17
3482 3947 7.001073 GTCAAGATCTAATGGCCCTTAATTCT 58.999 38.462 0.00 3.44 0.00 2.40
3483 3948 7.503902 GTCAAGATCTAATGGCCCTTAATTCTT 59.496 37.037 14.20 14.20 0.00 2.52
3484 3949 7.721399 TCAAGATCTAATGGCCCTTAATTCTTC 59.279 37.037 15.88 5.22 0.00 2.87
3485 3950 6.547402 AGATCTAATGGCCCTTAATTCTTCC 58.453 40.000 0.00 0.00 0.00 3.46
3486 3951 4.714632 TCTAATGGCCCTTAATTCTTCCG 58.285 43.478 0.00 0.00 0.00 4.30
3487 3952 3.382083 AATGGCCCTTAATTCTTCCGT 57.618 42.857 0.00 0.00 0.00 4.69
3488 3953 2.122783 TGGCCCTTAATTCTTCCGTG 57.877 50.000 0.00 0.00 0.00 4.94
3489 3954 1.353022 TGGCCCTTAATTCTTCCGTGT 59.647 47.619 0.00 0.00 0.00 4.49
3490 3955 2.224917 TGGCCCTTAATTCTTCCGTGTT 60.225 45.455 0.00 0.00 0.00 3.32
3491 3956 2.823747 GGCCCTTAATTCTTCCGTGTTT 59.176 45.455 0.00 0.00 0.00 2.83
3492 3957 4.011698 GGCCCTTAATTCTTCCGTGTTTA 58.988 43.478 0.00 0.00 0.00 2.01
3493 3958 4.460034 GGCCCTTAATTCTTCCGTGTTTAA 59.540 41.667 0.00 0.00 0.00 1.52
3494 3959 5.126545 GGCCCTTAATTCTTCCGTGTTTAAT 59.873 40.000 0.00 0.00 0.00 1.40
3495 3960 6.033966 GCCCTTAATTCTTCCGTGTTTAATG 58.966 40.000 0.00 0.00 0.00 1.90
3496 3961 6.033966 CCCTTAATTCTTCCGTGTTTAATGC 58.966 40.000 0.00 0.00 0.00 3.56
3497 3962 6.127730 CCCTTAATTCTTCCGTGTTTAATGCT 60.128 38.462 0.00 0.00 0.00 3.79
3498 3963 6.747280 CCTTAATTCTTCCGTGTTTAATGCTG 59.253 38.462 0.00 0.00 0.00 4.41
3499 3964 3.552604 TTCTTCCGTGTTTAATGCTGC 57.447 42.857 0.00 0.00 0.00 5.25
3500 3965 2.499197 TCTTCCGTGTTTAATGCTGCA 58.501 42.857 4.13 4.13 0.00 4.41
3501 3966 2.881513 TCTTCCGTGTTTAATGCTGCAA 59.118 40.909 6.36 0.00 0.00 4.08
3502 3967 2.987413 TCCGTGTTTAATGCTGCAAG 57.013 45.000 6.36 0.00 0.00 4.01
3514 3979 3.317608 CTGCAAGCCACGCATTAAG 57.682 52.632 0.00 0.00 39.02 1.85
3515 3980 0.799534 CTGCAAGCCACGCATTAAGC 60.800 55.000 0.00 0.00 39.02 3.09
3516 3981 1.517039 GCAAGCCACGCATTAAGCC 60.517 57.895 0.00 0.00 41.38 4.35
3517 3982 1.882311 CAAGCCACGCATTAAGCCA 59.118 52.632 0.00 0.00 41.38 4.75
3518 3983 0.456653 CAAGCCACGCATTAAGCCAC 60.457 55.000 0.00 0.00 41.38 5.01
3519 3984 0.609131 AAGCCACGCATTAAGCCACT 60.609 50.000 0.00 0.00 41.38 4.00
3520 3985 0.251916 AGCCACGCATTAAGCCACTA 59.748 50.000 0.00 0.00 41.38 2.74
3521 3986 0.377203 GCCACGCATTAAGCCACTAC 59.623 55.000 0.00 0.00 41.38 2.73
3522 3987 1.732941 CCACGCATTAAGCCACTACA 58.267 50.000 0.00 0.00 41.38 2.74
3523 3988 2.080693 CCACGCATTAAGCCACTACAA 58.919 47.619 0.00 0.00 41.38 2.41
3524 3989 2.682856 CCACGCATTAAGCCACTACAAT 59.317 45.455 0.00 0.00 41.38 2.71
3525 3990 3.242739 CCACGCATTAAGCCACTACAATC 60.243 47.826 0.00 0.00 41.38 2.67
3526 3991 3.373748 CACGCATTAAGCCACTACAATCA 59.626 43.478 0.00 0.00 41.38 2.57
3527 3992 4.006989 ACGCATTAAGCCACTACAATCAA 58.993 39.130 0.00 0.00 41.38 2.57
3528 3993 4.457603 ACGCATTAAGCCACTACAATCAAA 59.542 37.500 0.00 0.00 41.38 2.69
3529 3994 4.793216 CGCATTAAGCCACTACAATCAAAC 59.207 41.667 0.00 0.00 41.38 2.93
3530 3995 4.793216 GCATTAAGCCACTACAATCAAACG 59.207 41.667 0.00 0.00 37.23 3.60
3531 3996 2.989422 AAGCCACTACAATCAAACGC 57.011 45.000 0.00 0.00 0.00 4.84
3532 3997 1.890876 AGCCACTACAATCAAACGCA 58.109 45.000 0.00 0.00 0.00 5.24
3533 3998 1.535462 AGCCACTACAATCAAACGCAC 59.465 47.619 0.00 0.00 0.00 5.34
3534 3999 1.265635 GCCACTACAATCAAACGCACA 59.734 47.619 0.00 0.00 0.00 4.57
3535 4000 2.916111 CCACTACAATCAAACGCACAC 58.084 47.619 0.00 0.00 0.00 3.82
3536 4001 2.350388 CCACTACAATCAAACGCACACC 60.350 50.000 0.00 0.00 0.00 4.16
3537 4002 2.548057 CACTACAATCAAACGCACACCT 59.452 45.455 0.00 0.00 0.00 4.00
3538 4003 2.806244 ACTACAATCAAACGCACACCTC 59.194 45.455 0.00 0.00 0.00 3.85
3539 4004 0.951558 ACAATCAAACGCACACCTCC 59.048 50.000 0.00 0.00 0.00 4.30
3540 4005 0.950836 CAATCAAACGCACACCTCCA 59.049 50.000 0.00 0.00 0.00 3.86
3541 4006 1.541147 CAATCAAACGCACACCTCCAT 59.459 47.619 0.00 0.00 0.00 3.41
3542 4007 1.453155 ATCAAACGCACACCTCCATC 58.547 50.000 0.00 0.00 0.00 3.51
3543 4008 0.948623 TCAAACGCACACCTCCATCG 60.949 55.000 0.00 0.00 0.00 3.84
3544 4009 0.948623 CAAACGCACACCTCCATCGA 60.949 55.000 0.00 0.00 0.00 3.59
3545 4010 0.670546 AAACGCACACCTCCATCGAG 60.671 55.000 0.00 0.00 35.72 4.04
3546 4011 1.816863 AACGCACACCTCCATCGAGT 61.817 55.000 0.00 0.00 33.93 4.18
3547 4012 1.517257 CGCACACCTCCATCGAGTC 60.517 63.158 0.00 0.00 33.93 3.36
3548 4013 1.591703 GCACACCTCCATCGAGTCA 59.408 57.895 0.00 0.00 33.93 3.41
3549 4014 0.176680 GCACACCTCCATCGAGTCAT 59.823 55.000 0.00 0.00 33.93 3.06
3550 4015 1.804372 GCACACCTCCATCGAGTCATC 60.804 57.143 0.00 0.00 33.93 2.92
3551 4016 1.115467 ACACCTCCATCGAGTCATCC 58.885 55.000 0.00 0.00 33.93 3.51
3552 4017 1.114627 CACCTCCATCGAGTCATCCA 58.885 55.000 0.00 0.00 33.93 3.41
3553 4018 1.690893 CACCTCCATCGAGTCATCCAT 59.309 52.381 0.00 0.00 33.93 3.41
3554 4019 2.893489 CACCTCCATCGAGTCATCCATA 59.107 50.000 0.00 0.00 33.93 2.74
3555 4020 3.321968 CACCTCCATCGAGTCATCCATAA 59.678 47.826 0.00 0.00 33.93 1.90
3556 4021 3.576118 ACCTCCATCGAGTCATCCATAAG 59.424 47.826 0.00 0.00 33.93 1.73
3557 4022 3.829026 CCTCCATCGAGTCATCCATAAGA 59.171 47.826 0.00 0.00 33.93 2.10
3558 4023 4.281941 CCTCCATCGAGTCATCCATAAGAA 59.718 45.833 0.00 0.00 33.93 2.52
3559 4024 5.221521 CCTCCATCGAGTCATCCATAAGAAA 60.222 44.000 0.00 0.00 33.93 2.52
3560 4025 6.233905 TCCATCGAGTCATCCATAAGAAAA 57.766 37.500 0.00 0.00 0.00 2.29
3561 4026 6.649155 TCCATCGAGTCATCCATAAGAAAAA 58.351 36.000 0.00 0.00 0.00 1.94
3562 4027 6.538742 TCCATCGAGTCATCCATAAGAAAAAC 59.461 38.462 0.00 0.00 0.00 2.43
3563 4028 6.238484 CCATCGAGTCATCCATAAGAAAAACC 60.238 42.308 0.00 0.00 0.00 3.27
3564 4029 4.868171 TCGAGTCATCCATAAGAAAAACCG 59.132 41.667 0.00 0.00 0.00 4.44
3565 4030 4.494199 CGAGTCATCCATAAGAAAAACCGC 60.494 45.833 0.00 0.00 0.00 5.68
3566 4031 3.694566 AGTCATCCATAAGAAAAACCGCC 59.305 43.478 0.00 0.00 0.00 6.13
3567 4032 3.020984 TCATCCATAAGAAAAACCGCCC 58.979 45.455 0.00 0.00 0.00 6.13
3568 4033 1.842052 TCCATAAGAAAAACCGCCCC 58.158 50.000 0.00 0.00 0.00 5.80
3569 4034 1.356398 TCCATAAGAAAAACCGCCCCT 59.644 47.619 0.00 0.00 0.00 4.79
3570 4035 1.749063 CCATAAGAAAAACCGCCCCTC 59.251 52.381 0.00 0.00 0.00 4.30
3571 4036 1.400494 CATAAGAAAAACCGCCCCTCG 59.600 52.381 0.00 0.00 38.08 4.63
3572 4037 0.956902 TAAGAAAAACCGCCCCTCGC 60.957 55.000 0.00 0.00 36.73 5.03
3573 4038 2.969300 AAGAAAAACCGCCCCTCGCA 62.969 55.000 0.00 0.00 37.30 5.10
3574 4039 3.263503 GAAAAACCGCCCCTCGCAC 62.264 63.158 0.00 0.00 37.30 5.34
3582 4047 4.201679 CCCCTCGCACGCACGATA 62.202 66.667 0.00 0.00 42.02 2.92
3583 4048 2.954868 CCCTCGCACGCACGATAC 60.955 66.667 0.00 0.00 42.02 2.24
3584 4049 2.954868 CCTCGCACGCACGATACC 60.955 66.667 0.00 0.00 42.02 2.73
3585 4050 2.954868 CTCGCACGCACGATACCC 60.955 66.667 0.00 0.00 42.02 3.69
3586 4051 3.693382 CTCGCACGCACGATACCCA 62.693 63.158 0.00 0.00 42.02 4.51
3587 4052 3.550992 CGCACGCACGATACCCAC 61.551 66.667 0.00 0.00 34.06 4.61
3588 4053 2.125673 GCACGCACGATACCCACT 60.126 61.111 0.00 0.00 0.00 4.00
3589 4054 2.165301 GCACGCACGATACCCACTC 61.165 63.158 0.00 0.00 0.00 3.51
3590 4055 1.872234 CACGCACGATACCCACTCG 60.872 63.158 0.00 0.00 41.77 4.18
3591 4056 2.954868 CGCACGATACCCACTCGC 60.955 66.667 0.00 0.00 39.71 5.03
3592 4057 2.585247 GCACGATACCCACTCGCC 60.585 66.667 0.00 0.00 39.71 5.54
3593 4058 2.106332 CACGATACCCACTCGCCC 59.894 66.667 0.00 0.00 39.71 6.13
3594 4059 2.363276 ACGATACCCACTCGCCCA 60.363 61.111 0.00 0.00 39.71 5.36
3595 4060 1.760875 ACGATACCCACTCGCCCAT 60.761 57.895 0.00 0.00 39.71 4.00
3596 4061 0.468585 ACGATACCCACTCGCCCATA 60.469 55.000 0.00 0.00 39.71 2.74
3597 4062 0.895530 CGATACCCACTCGCCCATAT 59.104 55.000 0.00 0.00 0.00 1.78
3598 4063 1.404181 CGATACCCACTCGCCCATATG 60.404 57.143 0.00 0.00 0.00 1.78
3599 4064 0.324943 ATACCCACTCGCCCATATGC 59.675 55.000 0.00 0.00 0.00 3.14
3600 4065 1.764571 TACCCACTCGCCCATATGCC 61.765 60.000 0.00 0.00 0.00 4.40
3601 4066 2.510411 CCACTCGCCCATATGCCA 59.490 61.111 0.00 0.00 0.00 4.92
3602 4067 1.893808 CCACTCGCCCATATGCCAC 60.894 63.158 0.00 0.00 0.00 5.01
3603 4068 1.893808 CACTCGCCCATATGCCACC 60.894 63.158 0.00 0.00 0.00 4.61
3604 4069 2.666190 CTCGCCCATATGCCACCG 60.666 66.667 0.00 0.00 0.00 4.94
3605 4070 4.927782 TCGCCCATATGCCACCGC 62.928 66.667 0.00 0.00 0.00 5.68
3608 4073 3.889692 CCCATATGCCACCGCCCT 61.890 66.667 0.00 0.00 0.00 5.19
3609 4074 2.281761 CCATATGCCACCGCCCTC 60.282 66.667 0.00 0.00 0.00 4.30
3610 4075 2.666190 CATATGCCACCGCCCTCG 60.666 66.667 0.00 0.00 0.00 4.63
3611 4076 4.626081 ATATGCCACCGCCCTCGC 62.626 66.667 0.00 0.00 0.00 5.03
3621 4086 4.971125 GCCCTCGCTCGCCCATAC 62.971 72.222 0.00 0.00 0.00 2.39
3622 4087 4.647615 CCCTCGCTCGCCCATACG 62.648 72.222 0.00 0.00 0.00 3.06
3633 4098 4.910585 CCATACGCCACCGCCCTC 62.911 72.222 0.00 0.00 38.22 4.30
3652 4117 3.782443 CTCGCCCACCCCCTACAC 61.782 72.222 0.00 0.00 0.00 2.90
3688 4153 3.314331 CCTCACACCACCGCTCCT 61.314 66.667 0.00 0.00 0.00 3.69
3689 4154 2.262915 CTCACACCACCGCTCCTC 59.737 66.667 0.00 0.00 0.00 3.71
3690 4155 3.302347 CTCACACCACCGCTCCTCC 62.302 68.421 0.00 0.00 0.00 4.30
3691 4156 4.742201 CACACCACCGCTCCTCCG 62.742 72.222 0.00 0.00 0.00 4.63
3718 4183 2.190313 TGCCCCACAGATGCGATC 59.810 61.111 0.00 0.00 0.00 3.69
3719 4184 2.969238 GCCCCACAGATGCGATCG 60.969 66.667 11.69 11.69 0.00 3.69
3720 4185 2.969238 CCCCACAGATGCGATCGC 60.969 66.667 32.48 32.48 42.35 4.58
3721 4186 2.969238 CCCACAGATGCGATCGCC 60.969 66.667 35.12 21.68 41.09 5.54
3722 4187 3.333189 CCACAGATGCGATCGCCG 61.333 66.667 35.12 22.78 41.09 6.46
3723 4188 2.583319 CACAGATGCGATCGCCGT 60.583 61.111 35.12 24.43 41.09 5.68
3724 4189 2.167219 CACAGATGCGATCGCCGTT 61.167 57.895 35.12 20.92 41.09 4.44
3725 4190 2.167219 ACAGATGCGATCGCCGTTG 61.167 57.895 35.12 28.74 41.09 4.10
3726 4191 3.264897 AGATGCGATCGCCGTTGC 61.265 61.111 35.12 19.56 41.09 4.17
3727 4192 4.299316 GATGCGATCGCCGTTGCC 62.299 66.667 35.12 14.75 41.09 4.52
3751 4216 2.501610 GGCTCCTCCGCTAGGTTG 59.498 66.667 2.25 0.00 46.62 3.77
3752 4217 2.202946 GCTCCTCCGCTAGGTTGC 60.203 66.667 2.25 4.93 46.62 4.17
3753 4218 2.726351 GCTCCTCCGCTAGGTTGCT 61.726 63.158 11.98 0.00 46.62 3.91
3754 4219 1.142748 CTCCTCCGCTAGGTTGCTG 59.857 63.158 2.25 0.00 46.62 4.41
3755 4220 2.512515 CCTCCGCTAGGTTGCTGC 60.513 66.667 0.00 0.00 40.94 5.25
3756 4221 2.512515 CTCCGCTAGGTTGCTGCC 60.513 66.667 0.00 0.00 39.05 4.85
3757 4222 4.451150 TCCGCTAGGTTGCTGCCG 62.451 66.667 0.00 0.00 39.05 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.144936 GCACGAGGGCTGCTTCTAT 59.855 57.895 0.00 0.00 0.00 1.98
41 42 2.579201 GCACGAGGGCTGCTTCTA 59.421 61.111 0.00 0.00 0.00 2.10
42 43 4.749310 CGCACGAGGGCTGCTTCT 62.749 66.667 0.00 0.00 32.03 2.85
66 67 1.401018 GCCCGGTTTGATTTCGTCAAG 60.401 52.381 0.00 0.00 46.85 3.02
89 90 1.439644 GATTTCCCTCTCGCTCGCT 59.560 57.895 0.00 0.00 0.00 4.93
91 92 0.661552 TACGATTTCCCTCTCGCTCG 59.338 55.000 0.00 0.00 38.42 5.03
92 93 1.677052 AGTACGATTTCCCTCTCGCTC 59.323 52.381 0.00 0.00 38.42 5.03
94 95 2.877168 TCTAGTACGATTTCCCTCTCGC 59.123 50.000 0.00 0.00 38.42 5.03
95 96 4.575645 AGTTCTAGTACGATTTCCCTCTCG 59.424 45.833 0.00 0.00 40.62 4.04
96 97 6.017192 GGTAGTTCTAGTACGATTTCCCTCTC 60.017 46.154 0.00 0.00 0.00 3.20
100 101 5.841957 TGGTAGTTCTAGTACGATTTCCC 57.158 43.478 0.00 0.00 0.00 3.97
101 102 6.252228 CGTTTGGTAGTTCTAGTACGATTTCC 59.748 42.308 0.00 0.00 0.00 3.13
111 135 3.314541 AGTGGCGTTTGGTAGTTCTAG 57.685 47.619 0.00 0.00 0.00 2.43
115 139 1.601166 GGAAGTGGCGTTTGGTAGTT 58.399 50.000 0.00 0.00 0.00 2.24
116 140 0.250597 GGGAAGTGGCGTTTGGTAGT 60.251 55.000 0.00 0.00 0.00 2.73
136 160 1.279840 GAGGTTTCAGTGCGTGTGC 59.720 57.895 0.00 0.00 43.20 4.57
140 164 4.027755 CACGAGGTTTCAGTGCGT 57.972 55.556 0.00 0.00 35.33 5.24
148 172 0.878961 GTCGAAGTGGCACGAGGTTT 60.879 55.000 12.71 0.00 39.16 3.27
175 200 0.535102 CGGGTTTGACTTGTCTGCCT 60.535 55.000 2.35 0.00 0.00 4.75
211 237 2.536761 TCACATCGGTCGAAAAAGGT 57.463 45.000 0.00 0.00 0.00 3.50
213 239 5.718649 ACATATCACATCGGTCGAAAAAG 57.281 39.130 0.00 0.00 0.00 2.27
233 277 5.954296 ACTACTAGTACGAGAGCAAAACA 57.046 39.130 10.22 0.00 0.00 2.83
250 301 4.141981 TGCGTCAGCTCTAGTACTACTACT 60.142 45.833 0.00 0.00 45.42 2.57
251 302 4.118410 TGCGTCAGCTCTAGTACTACTAC 58.882 47.826 0.00 0.00 45.42 2.73
252 303 4.099113 TCTGCGTCAGCTCTAGTACTACTA 59.901 45.833 0.00 0.00 45.42 1.82
253 304 3.118702 TCTGCGTCAGCTCTAGTACTACT 60.119 47.826 0.00 0.00 45.42 2.57
254 305 3.196463 TCTGCGTCAGCTCTAGTACTAC 58.804 50.000 0.00 0.00 45.42 2.73
255 306 3.538634 TCTGCGTCAGCTCTAGTACTA 57.461 47.619 1.89 1.89 45.42 1.82
256 307 2.404923 TCTGCGTCAGCTCTAGTACT 57.595 50.000 0.00 0.00 45.42 2.73
265 316 1.416813 CGACTCCATTCTGCGTCAGC 61.417 60.000 2.45 0.00 45.41 4.26
266 317 0.109086 ACGACTCCATTCTGCGTCAG 60.109 55.000 0.00 1.02 0.00 3.51
279 330 4.370917 AGAGATCTAACTACCGACGACTC 58.629 47.826 0.00 0.00 0.00 3.36
287 338 6.786967 TTACACCCAAGAGATCTAACTACC 57.213 41.667 0.00 0.00 0.00 3.18
302 358 6.531503 TTCTTGTTTCACATTTTACACCCA 57.468 33.333 0.00 0.00 0.00 4.51
303 359 7.835634 TTTTCTTGTTTCACATTTTACACCC 57.164 32.000 0.00 0.00 0.00 4.61
321 379 4.941873 CCGCCAAGAGGTAGTATTTTTCTT 59.058 41.667 0.00 0.00 37.19 2.52
333 391 2.932234 CGTCAGTCCGCCAAGAGGT 61.932 63.158 0.00 0.00 37.19 3.85
334 392 2.125912 CGTCAGTCCGCCAAGAGG 60.126 66.667 0.00 0.00 38.23 3.69
335 393 1.734477 CACGTCAGTCCGCCAAGAG 60.734 63.158 0.00 0.00 0.00 2.85
355 413 0.734942 ACTGAAATACACCGTCGCCG 60.735 55.000 0.00 0.00 0.00 6.46
356 414 2.190981 CTACTGAAATACACCGTCGCC 58.809 52.381 0.00 0.00 0.00 5.54
365 423 6.921857 ACACCACGTATATGCTACTGAAATAC 59.078 38.462 0.00 0.00 0.00 1.89
366 424 6.921307 CACACCACGTATATGCTACTGAAATA 59.079 38.462 0.00 0.00 0.00 1.40
367 425 5.753438 CACACCACGTATATGCTACTGAAAT 59.247 40.000 0.00 0.00 0.00 2.17
371 429 3.796717 CACACACCACGTATATGCTACTG 59.203 47.826 0.00 0.00 0.00 2.74
372 430 3.446161 ACACACACCACGTATATGCTACT 59.554 43.478 0.00 0.00 0.00 2.57
373 431 3.550275 CACACACACCACGTATATGCTAC 59.450 47.826 0.00 0.00 0.00 3.58
374 432 3.193903 ACACACACACCACGTATATGCTA 59.806 43.478 0.00 0.00 0.00 3.49
375 433 2.028476 ACACACACACCACGTATATGCT 60.028 45.455 0.00 0.00 0.00 3.79
376 434 2.093625 CACACACACACCACGTATATGC 59.906 50.000 0.00 0.00 0.00 3.14
377 435 3.122780 CACACACACACACCACGTATATG 59.877 47.826 0.00 0.00 0.00 1.78
379 437 2.101082 ACACACACACACACCACGTATA 59.899 45.455 0.00 0.00 0.00 1.47
390 450 2.753055 ACACTACACACACACACACA 57.247 45.000 0.00 0.00 0.00 3.72
393 453 3.120792 CACCTACACTACACACACACAC 58.879 50.000 0.00 0.00 0.00 3.82
395 455 3.120792 CACACCTACACTACACACACAC 58.879 50.000 0.00 0.00 0.00 3.82
396 456 2.761767 ACACACCTACACTACACACACA 59.238 45.455 0.00 0.00 0.00 3.72
398 458 2.482316 GCACACACCTACACTACACACA 60.482 50.000 0.00 0.00 0.00 3.72
404 464 1.268625 CTCGTGCACACACCTACACTA 59.731 52.381 18.64 0.00 44.40 2.74
405 465 0.032130 CTCGTGCACACACCTACACT 59.968 55.000 18.64 0.00 44.40 3.55
406 466 0.031585 TCTCGTGCACACACCTACAC 59.968 55.000 18.64 0.00 44.40 2.90
408 468 0.596577 TCTCTCGTGCACACACCTAC 59.403 55.000 18.64 0.00 44.40 3.18
409 469 0.881796 CTCTCTCGTGCACACACCTA 59.118 55.000 18.64 0.00 44.40 3.08
410 470 1.662608 CTCTCTCGTGCACACACCT 59.337 57.895 18.64 0.00 44.40 4.00
411 471 1.373497 CCTCTCTCGTGCACACACC 60.373 63.158 18.64 0.00 44.40 4.16
412 472 2.024319 GCCTCTCTCGTGCACACAC 61.024 63.158 18.64 0.00 43.76 3.82
413 473 2.340078 GCCTCTCTCGTGCACACA 59.660 61.111 18.64 0.94 0.00 3.72
414 474 2.433318 GGCCTCTCTCGTGCACAC 60.433 66.667 18.64 0.00 0.00 3.82
415 475 4.056125 CGGCCTCTCTCGTGCACA 62.056 66.667 18.64 3.15 0.00 4.57
416 476 4.803426 CCGGCCTCTCTCGTGCAC 62.803 72.222 6.82 6.82 0.00 4.57
418 478 3.296709 TTTCCGGCCTCTCTCGTGC 62.297 63.158 0.00 0.00 0.00 5.34
419 479 1.446272 GTTTCCGGCCTCTCTCGTG 60.446 63.158 0.00 0.00 0.00 4.35
420 480 1.186267 AAGTTTCCGGCCTCTCTCGT 61.186 55.000 0.00 0.00 0.00 4.18
421 481 0.037232 AAAGTTTCCGGCCTCTCTCG 60.037 55.000 0.00 0.00 0.00 4.04
422 482 2.077627 GAAAAGTTTCCGGCCTCTCTC 58.922 52.381 0.00 0.00 0.00 3.20
423 483 1.700186 AGAAAAGTTTCCGGCCTCTCT 59.300 47.619 0.00 0.00 37.92 3.10
424 484 2.186532 AGAAAAGTTTCCGGCCTCTC 57.813 50.000 0.00 0.00 37.92 3.20
425 485 2.158667 TGAAGAAAAGTTTCCGGCCTCT 60.159 45.455 0.00 0.00 37.92 3.69
426 486 2.226674 CTGAAGAAAAGTTTCCGGCCTC 59.773 50.000 0.00 0.00 37.92 4.70
427 487 2.230660 CTGAAGAAAAGTTTCCGGCCT 58.769 47.619 0.00 0.00 37.92 5.19
428 488 1.335964 GCTGAAGAAAAGTTTCCGGCC 60.336 52.381 0.00 0.00 37.92 6.13
429 489 1.663161 CGCTGAAGAAAAGTTTCCGGC 60.663 52.381 0.00 2.77 37.92 6.13
430 490 1.663161 GCGCTGAAGAAAAGTTTCCGG 60.663 52.381 0.00 0.00 37.92 5.14
431 491 1.674908 GCGCTGAAGAAAAGTTTCCG 58.325 50.000 0.00 0.00 37.92 4.30
432 492 1.002792 ACGCGCTGAAGAAAAGTTTCC 60.003 47.619 5.73 0.00 37.92 3.13
433 493 2.299170 GACGCGCTGAAGAAAAGTTTC 58.701 47.619 5.73 0.00 37.45 2.78
434 494 1.332904 CGACGCGCTGAAGAAAAGTTT 60.333 47.619 5.73 0.00 0.00 2.66
435 495 0.232303 CGACGCGCTGAAGAAAAGTT 59.768 50.000 5.73 0.00 0.00 2.66
458 518 7.644945 ACGATAACGAAATGTGTATGAATCGTA 59.355 33.333 0.00 0.00 42.04 3.43
462 522 8.545420 GGTAACGATAACGAAATGTGTATGAAT 58.455 33.333 0.00 0.00 42.66 2.57
463 523 7.544915 TGGTAACGATAACGAAATGTGTATGAA 59.455 33.333 0.00 0.00 42.66 2.57
467 527 6.867816 ACTTGGTAACGATAACGAAATGTGTA 59.132 34.615 0.00 0.00 42.66 2.90
473 533 3.919804 CCGACTTGGTAACGATAACGAAA 59.080 43.478 0.00 0.00 42.66 3.46
480 540 1.219935 GCCCCGACTTGGTAACGAT 59.780 57.895 0.00 0.00 42.51 3.73
503 563 3.564027 GTTTCCGGCCGATCAGCG 61.564 66.667 30.73 8.93 40.47 5.18
504 564 3.564027 CGTTTCCGGCCGATCAGC 61.564 66.667 30.73 10.88 0.00 4.26
530 599 1.671379 GGGGACGCCACTGTTCTTC 60.671 63.158 3.14 0.00 0.00 2.87
540 609 1.070957 GTGGCTATTAGGGGACGCC 59.929 63.158 0.00 0.00 41.06 5.68
550 619 7.772757 TCAAAAATCAAAAAGGTTGTGGCTATT 59.227 29.630 0.00 0.00 0.00 1.73
553 622 5.495640 TCAAAAATCAAAAAGGTTGTGGCT 58.504 33.333 0.00 0.00 0.00 4.75
561 630 5.815222 ACGAAGGGTTCAAAAATCAAAAAGG 59.185 36.000 0.00 0.00 0.00 3.11
563 632 5.517054 CGACGAAGGGTTCAAAAATCAAAAA 59.483 36.000 0.00 0.00 0.00 1.94
596 672 1.216710 CCTGGCTCGTGTCCTTCTC 59.783 63.158 0.00 0.00 0.00 2.87
597 673 2.948720 GCCTGGCTCGTGTCCTTCT 61.949 63.158 12.43 0.00 0.00 2.85
598 674 2.435059 GCCTGGCTCGTGTCCTTC 60.435 66.667 12.43 0.00 0.00 3.46
599 675 4.379243 CGCCTGGCTCGTGTCCTT 62.379 66.667 17.92 0.00 0.00 3.36
601 677 4.681978 AACGCCTGGCTCGTGTCC 62.682 66.667 17.92 0.00 40.36 4.02
602 678 3.112709 GAACGCCTGGCTCGTGTC 61.113 66.667 17.92 2.85 40.36 3.67
710 793 1.750399 GTGGCGGTTGCTGATGGAT 60.750 57.895 0.00 0.00 42.25 3.41
734 817 4.036977 TTCGTGTGGGAGCGAAAC 57.963 55.556 0.00 0.00 42.94 2.78
737 820 1.959226 GCTTTTCGTGTGGGAGCGA 60.959 57.895 0.00 0.00 35.17 4.93
787 877 3.355344 ATTGGATTGGGCCGGGGT 61.355 61.111 2.18 0.00 0.00 4.95
788 878 2.521708 GATTGGATTGGGCCGGGG 60.522 66.667 2.18 0.00 0.00 5.73
790 880 0.823356 ATTCGATTGGATTGGGCCGG 60.823 55.000 0.00 0.00 0.00 6.13
791 881 0.593128 GATTCGATTGGATTGGGCCG 59.407 55.000 0.00 0.00 0.00 6.13
792 882 0.961753 GGATTCGATTGGATTGGGCC 59.038 55.000 0.00 0.00 0.00 5.80
793 883 1.338020 GTGGATTCGATTGGATTGGGC 59.662 52.381 0.00 0.00 0.00 5.36
794 884 1.603802 CGTGGATTCGATTGGATTGGG 59.396 52.381 0.00 0.00 0.00 4.12
795 885 1.002468 GCGTGGATTCGATTGGATTGG 60.002 52.381 0.00 0.00 0.00 3.16
796 886 1.333169 CGCGTGGATTCGATTGGATTG 60.333 52.381 0.00 0.00 0.00 2.67
797 887 0.937304 CGCGTGGATTCGATTGGATT 59.063 50.000 0.00 0.00 0.00 3.01
798 888 1.498865 GCGCGTGGATTCGATTGGAT 61.499 55.000 8.43 0.00 0.00 3.41
799 889 2.171079 GCGCGTGGATTCGATTGGA 61.171 57.895 8.43 0.00 0.00 3.53
806 896 2.173382 GTGTGTGCGCGTGGATTC 59.827 61.111 8.43 0.00 0.00 2.52
944 1049 2.434774 GGTTTCTTGGACGGGGCT 59.565 61.111 0.00 0.00 0.00 5.19
945 1050 3.053896 CGGTTTCTTGGACGGGGC 61.054 66.667 0.00 0.00 0.00 5.80
1011 1350 1.671054 CCCGATCACCGTGTTGCTT 60.671 57.895 0.00 0.00 36.31 3.91
1020 1359 0.249489 CGTTCAGGATCCCGATCACC 60.249 60.000 8.55 0.00 39.54 4.02
1021 1360 0.876342 GCGTTCAGGATCCCGATCAC 60.876 60.000 8.55 0.00 39.54 3.06
1044 1383 1.216710 CACCGAGAGCAGGAAGGTC 59.783 63.158 0.00 0.00 45.07 3.85
1145 1484 2.602676 ATGAGGAACACCCCCACCG 61.603 63.158 0.00 0.00 34.66 4.94
1146 1485 1.000896 CATGAGGAACACCCCCACC 60.001 63.158 0.00 0.00 34.66 4.61
1147 1486 1.678970 GCATGAGGAACACCCCCAC 60.679 63.158 0.00 0.00 34.66 4.61
1155 1494 0.532573 TGGAGACGAGCATGAGGAAC 59.467 55.000 0.00 0.00 0.00 3.62
1206 1545 1.197430 AGAACCAGAGGAGGCAGGTG 61.197 60.000 0.00 0.00 33.93 4.00
1329 1668 1.482593 CCGAGCCTGTACTCCTTGAAT 59.517 52.381 0.00 0.00 32.79 2.57
1342 1681 2.164332 TTGGAGTAGTCCCCGAGCCT 62.164 60.000 14.26 0.00 43.15 4.58
1373 1712 2.436087 CTTGTCGTTCTCCACCCGCT 62.436 60.000 0.00 0.00 0.00 5.52
1391 1730 2.307098 CCCTTGATCCTGTTCCAGTTCT 59.693 50.000 0.00 0.00 0.00 3.01
1454 1793 0.243907 CATGAACTGGTCGACCGTCT 59.756 55.000 28.70 15.46 39.43 4.18
1457 1796 0.736325 GGACATGAACTGGTCGACCG 60.736 60.000 28.70 23.92 39.43 4.79
1504 1849 1.701545 GCGAATCGGCGGTGAAATGA 61.702 55.000 7.21 0.00 0.00 2.57
1532 1877 8.980481 AATAAATGGACAAGAATAGTACCCAG 57.020 34.615 0.00 0.00 0.00 4.45
1534 1879 9.403583 TGAAATAAATGGACAAGAATAGTACCC 57.596 33.333 0.00 0.00 0.00 3.69
1562 1913 8.047310 CCTAGGTTTGTTATTGTCAGATTAGGT 58.953 37.037 0.00 0.00 0.00 3.08
1563 1914 7.012421 GCCTAGGTTTGTTATTGTCAGATTAGG 59.988 40.741 11.31 0.00 0.00 2.69
1565 1916 6.826741 GGCCTAGGTTTGTTATTGTCAGATTA 59.173 38.462 11.31 0.00 0.00 1.75
1566 1917 5.652452 GGCCTAGGTTTGTTATTGTCAGATT 59.348 40.000 11.31 0.00 0.00 2.40
1567 1918 5.193679 GGCCTAGGTTTGTTATTGTCAGAT 58.806 41.667 11.31 0.00 0.00 2.90
1568 1919 4.042311 TGGCCTAGGTTTGTTATTGTCAGA 59.958 41.667 11.31 0.00 0.00 3.27
1590 1942 6.370718 TCATCTCGGATCATCAAGCATATTTG 59.629 38.462 0.00 0.00 0.00 2.32
1597 1949 5.237996 TCAAATTCATCTCGGATCATCAAGC 59.762 40.000 0.00 0.00 0.00 4.01
1598 1950 6.856135 TCAAATTCATCTCGGATCATCAAG 57.144 37.500 0.00 0.00 0.00 3.02
1633 1985 9.978044 CCATGGTAAATTAAGTACTAGTCCTAC 57.022 37.037 2.57 0.00 0.00 3.18
1634 1986 9.940974 TCCATGGTAAATTAAGTACTAGTCCTA 57.059 33.333 12.58 0.00 0.00 2.94
1695 2054 5.050363 GCAGACACGTGAAAAAGAACTCATA 60.050 40.000 25.01 0.00 0.00 2.15
1777 2140 7.542890 TCTCAAACTGCAATTTGTTGACTTTA 58.457 30.769 19.10 0.00 39.97 1.85
1803 2166 8.967918 ACTAGATCAAGTTGTGCTACTACAATA 58.032 33.333 2.11 0.00 42.02 1.90
1914 2315 6.295719 AGTTGGGACTAGTTGATTATCGTT 57.704 37.500 0.00 0.00 33.32 3.85
1944 2348 7.062255 GCAACTATCATTTGGAAAAAGCAGTAC 59.938 37.037 0.00 0.00 0.00 2.73
1945 2349 7.090173 GCAACTATCATTTGGAAAAAGCAGTA 58.910 34.615 0.00 0.00 0.00 2.74
1947 2351 5.927689 TGCAACTATCATTTGGAAAAAGCAG 59.072 36.000 0.00 0.00 0.00 4.24
1948 2352 5.851720 TGCAACTATCATTTGGAAAAAGCA 58.148 33.333 0.00 0.00 0.00 3.91
1949 2353 6.673796 GCATGCAACTATCATTTGGAAAAAGC 60.674 38.462 14.21 0.00 0.00 3.51
1952 2356 4.863689 CGCATGCAACTATCATTTGGAAAA 59.136 37.500 19.57 0.00 0.00 2.29
2003 2415 1.002468 CCTCAAAACGTTGGTCTGCAG 60.002 52.381 7.63 7.63 35.29 4.41
2022 2434 2.354821 GGACCGTATCAAACATTGCTCC 59.645 50.000 0.00 0.00 0.00 4.70
2023 2435 3.270877 AGGACCGTATCAAACATTGCTC 58.729 45.455 0.00 0.00 0.00 4.26
2060 2475 2.383527 GCCGTCGGCTCAAAGTCAG 61.384 63.158 28.98 0.00 46.69 3.51
2074 2489 1.153901 CCGTTGACAGTATCGCCGT 60.154 57.895 0.00 0.00 0.00 5.68
2095 2510 5.049818 GGAAAATCACTATGAATCAGGAGCG 60.050 44.000 0.00 0.00 0.00 5.03
2118 2533 1.762370 AGGGTTGCTTTGGTTTGAAGG 59.238 47.619 0.00 0.00 0.00 3.46
2123 2538 1.413118 CCTGAGGGTTGCTTTGGTTT 58.587 50.000 0.00 0.00 0.00 3.27
2125 2540 1.531602 GCCTGAGGGTTGCTTTGGT 60.532 57.895 0.00 0.00 34.45 3.67
2184 2599 1.000274 GGTCTGGTTCCATGTTGCAAC 60.000 52.381 22.83 22.83 0.00 4.17
2192 2607 1.494721 ACACTTGTGGTCTGGTTCCAT 59.505 47.619 5.72 0.00 37.30 3.41
2239 2661 1.616374 AGTTTGGTAAAATGGCACCCG 59.384 47.619 0.00 0.00 33.61 5.28
2319 2741 6.509418 TGGTACTACATGCCTCAATTTTTC 57.491 37.500 0.00 0.00 33.29 2.29
2321 2743 6.663093 TCAATGGTACTACATGCCTCAATTTT 59.337 34.615 0.00 0.00 33.29 1.82
2325 2747 4.835284 TCAATGGTACTACATGCCTCAA 57.165 40.909 0.00 0.00 33.29 3.02
2326 2748 4.225042 AGTTCAATGGTACTACATGCCTCA 59.775 41.667 0.00 0.00 33.29 3.86
2327 2749 4.770795 AGTTCAATGGTACTACATGCCTC 58.229 43.478 0.00 0.00 33.29 4.70
2329 2751 5.897377 AAAGTTCAATGGTACTACATGCC 57.103 39.130 0.00 0.00 0.00 4.40
2385 2812 9.109393 GCCTCCATCGCAAATATAGAATAATAA 57.891 33.333 0.00 0.00 0.00 1.40
2390 2817 4.940046 CAGCCTCCATCGCAAATATAGAAT 59.060 41.667 0.00 0.00 0.00 2.40
2391 2818 4.040339 TCAGCCTCCATCGCAAATATAGAA 59.960 41.667 0.00 0.00 0.00 2.10
2392 2819 3.578282 TCAGCCTCCATCGCAAATATAGA 59.422 43.478 0.00 0.00 0.00 1.98
2393 2820 3.681897 GTCAGCCTCCATCGCAAATATAG 59.318 47.826 0.00 0.00 0.00 1.31
2394 2821 3.324846 AGTCAGCCTCCATCGCAAATATA 59.675 43.478 0.00 0.00 0.00 0.86
2395 2822 2.105477 AGTCAGCCTCCATCGCAAATAT 59.895 45.455 0.00 0.00 0.00 1.28
2762 3192 5.406649 CAAGCAATAAATAACCGAGCCAAA 58.593 37.500 0.00 0.00 0.00 3.28
2815 3254 2.923655 GAGAAGCACGACGATGAATGAA 59.076 45.455 0.00 0.00 0.00 2.57
2891 3334 8.147058 CACGGAGTATAGAACCTAACTAGTAGA 58.853 40.741 3.59 0.00 41.61 2.59
2906 3349 3.487372 TCCTCATGACCACGGAGTATAG 58.513 50.000 0.00 0.00 41.61 1.31
2907 3350 3.487372 CTCCTCATGACCACGGAGTATA 58.513 50.000 16.91 0.00 41.61 1.47
2908 3351 2.311463 CTCCTCATGACCACGGAGTAT 58.689 52.381 16.91 0.00 41.61 2.12
2943 3386 8.461222 TGCCATACATATCAAAGAACAGAAAAG 58.539 33.333 0.00 0.00 0.00 2.27
3040 3491 8.752766 AACAATCAAAGATGCAGTTCAATTAG 57.247 30.769 0.00 0.00 0.00 1.73
3048 3500 3.568538 GCGAAACAATCAAAGATGCAGT 58.431 40.909 0.00 0.00 0.00 4.40
3054 3506 3.476552 AGTCAGGCGAAACAATCAAAGA 58.523 40.909 0.00 0.00 0.00 2.52
3086 3538 6.257193 ACGAGCGAATTTCCGAAATATACTTT 59.743 34.615 6.79 0.00 0.00 2.66
3096 3548 1.336517 ACTTCACGAGCGAATTTCCGA 60.337 47.619 0.00 0.00 0.00 4.55
3191 3656 8.761575 AGCAATACATCAACCATTTAAAACAG 57.238 30.769 0.00 0.00 0.00 3.16
3215 3680 4.274214 TGCTGTCAAAACACTGAATGAGAG 59.726 41.667 0.00 0.00 36.56 3.20
3216 3681 4.198530 TGCTGTCAAAACACTGAATGAGA 58.801 39.130 0.00 0.00 0.00 3.27
3251 3716 4.346418 TCCAAGCTTAAAAATCAAAGGGCA 59.654 37.500 0.00 0.00 0.00 5.36
3252 3717 4.690748 GTCCAAGCTTAAAAATCAAAGGGC 59.309 41.667 0.00 0.00 0.00 5.19
3370 3835 1.180456 TTTAGGTGACACGCCGGAGA 61.180 55.000 13.83 0.00 39.30 3.71
3400 3865 8.852135 CCTCTCTTCCTTTTATAGTGGTAGTAG 58.148 40.741 0.00 0.00 0.00 2.57
3401 3866 7.783596 CCCTCTCTTCCTTTTATAGTGGTAGTA 59.216 40.741 0.00 0.00 0.00 1.82
3402 3867 6.612049 CCCTCTCTTCCTTTTATAGTGGTAGT 59.388 42.308 0.00 0.00 0.00 2.73
3403 3868 6.042208 CCCCTCTCTTCCTTTTATAGTGGTAG 59.958 46.154 0.00 0.00 0.00 3.18
3404 3869 5.903589 CCCCTCTCTTCCTTTTATAGTGGTA 59.096 44.000 0.00 0.00 0.00 3.25
3405 3870 4.722279 CCCCTCTCTTCCTTTTATAGTGGT 59.278 45.833 0.00 0.00 0.00 4.16
3406 3871 4.445019 GCCCCTCTCTTCCTTTTATAGTGG 60.445 50.000 0.00 0.00 0.00 4.00
3407 3872 4.164221 TGCCCCTCTCTTCCTTTTATAGTG 59.836 45.833 0.00 0.00 0.00 2.74
3408 3873 4.371681 TGCCCCTCTCTTCCTTTTATAGT 58.628 43.478 0.00 0.00 0.00 2.12
3409 3874 4.656112 TCTGCCCCTCTCTTCCTTTTATAG 59.344 45.833 0.00 0.00 0.00 1.31
3410 3875 4.631234 TCTGCCCCTCTCTTCCTTTTATA 58.369 43.478 0.00 0.00 0.00 0.98
3411 3876 3.464828 TCTGCCCCTCTCTTCCTTTTAT 58.535 45.455 0.00 0.00 0.00 1.40
3412 3877 2.915869 TCTGCCCCTCTCTTCCTTTTA 58.084 47.619 0.00 0.00 0.00 1.52
3413 3878 1.747444 TCTGCCCCTCTCTTCCTTTT 58.253 50.000 0.00 0.00 0.00 2.27
3414 3879 1.843206 GATCTGCCCCTCTCTTCCTTT 59.157 52.381 0.00 0.00 0.00 3.11
3415 3880 1.506025 GATCTGCCCCTCTCTTCCTT 58.494 55.000 0.00 0.00 0.00 3.36
3416 3881 0.399806 GGATCTGCCCCTCTCTTCCT 60.400 60.000 0.00 0.00 0.00 3.36
3417 3882 0.692419 TGGATCTGCCCCTCTCTTCC 60.692 60.000 0.00 0.00 34.97 3.46
3418 3883 1.207791 TTGGATCTGCCCCTCTCTTC 58.792 55.000 0.00 0.00 34.97 2.87
3419 3884 1.283321 GTTTGGATCTGCCCCTCTCTT 59.717 52.381 0.00 0.00 34.97 2.85
3420 3885 0.915364 GTTTGGATCTGCCCCTCTCT 59.085 55.000 0.00 0.00 34.97 3.10
3421 3886 0.620556 TGTTTGGATCTGCCCCTCTC 59.379 55.000 0.00 0.00 34.97 3.20
3422 3887 1.075601 TTGTTTGGATCTGCCCCTCT 58.924 50.000 0.00 0.00 34.97 3.69
3423 3888 2.027385 GATTGTTTGGATCTGCCCCTC 58.973 52.381 0.00 0.00 34.97 4.30
3424 3889 1.358787 TGATTGTTTGGATCTGCCCCT 59.641 47.619 0.00 0.00 34.97 4.79
3425 3890 1.478105 GTGATTGTTTGGATCTGCCCC 59.522 52.381 0.00 0.00 34.97 5.80
3426 3891 2.170166 TGTGATTGTTTGGATCTGCCC 58.830 47.619 0.00 0.00 34.97 5.36
3427 3892 3.181483 GGATGTGATTGTTTGGATCTGCC 60.181 47.826 0.00 0.00 37.10 4.85
3428 3893 3.444742 TGGATGTGATTGTTTGGATCTGC 59.555 43.478 0.00 0.00 0.00 4.26
3429 3894 5.358725 TGATGGATGTGATTGTTTGGATCTG 59.641 40.000 0.00 0.00 0.00 2.90
3430 3895 5.512298 TGATGGATGTGATTGTTTGGATCT 58.488 37.500 0.00 0.00 0.00 2.75
3431 3896 5.840243 TGATGGATGTGATTGTTTGGATC 57.160 39.130 0.00 0.00 0.00 3.36
3432 3897 6.460537 CGATTGATGGATGTGATTGTTTGGAT 60.461 38.462 0.00 0.00 0.00 3.41
3433 3898 5.163632 CGATTGATGGATGTGATTGTTTGGA 60.164 40.000 0.00 0.00 0.00 3.53
3434 3899 5.038683 CGATTGATGGATGTGATTGTTTGG 58.961 41.667 0.00 0.00 0.00 3.28
3435 3900 5.643664 ACGATTGATGGATGTGATTGTTTG 58.356 37.500 0.00 0.00 0.00 2.93
3436 3901 5.415389 TGACGATTGATGGATGTGATTGTTT 59.585 36.000 0.00 0.00 0.00 2.83
3437 3902 4.943093 TGACGATTGATGGATGTGATTGTT 59.057 37.500 0.00 0.00 0.00 2.83
3438 3903 4.516323 TGACGATTGATGGATGTGATTGT 58.484 39.130 0.00 0.00 0.00 2.71
3439 3904 5.295045 TCTTGACGATTGATGGATGTGATTG 59.705 40.000 0.00 0.00 0.00 2.67
3440 3905 5.430886 TCTTGACGATTGATGGATGTGATT 58.569 37.500 0.00 0.00 0.00 2.57
3441 3906 5.027293 TCTTGACGATTGATGGATGTGAT 57.973 39.130 0.00 0.00 0.00 3.06
3442 3907 4.470334 TCTTGACGATTGATGGATGTGA 57.530 40.909 0.00 0.00 0.00 3.58
3443 3908 5.055144 AGATCTTGACGATTGATGGATGTG 58.945 41.667 0.00 0.00 30.84 3.21
3444 3909 5.287674 AGATCTTGACGATTGATGGATGT 57.712 39.130 0.00 0.00 30.84 3.06
3445 3910 7.148457 CCATTAGATCTTGACGATTGATGGATG 60.148 40.741 0.00 0.00 37.81 3.51
3446 3911 6.877855 CCATTAGATCTTGACGATTGATGGAT 59.122 38.462 0.00 0.00 37.81 3.41
3447 3912 6.226052 CCATTAGATCTTGACGATTGATGGA 58.774 40.000 0.00 0.00 37.81 3.41
3448 3913 5.106791 GCCATTAGATCTTGACGATTGATGG 60.107 44.000 0.00 0.00 38.18 3.51
3449 3914 5.106791 GGCCATTAGATCTTGACGATTGATG 60.107 44.000 0.00 0.00 30.84 3.07
3450 3915 4.999950 GGCCATTAGATCTTGACGATTGAT 59.000 41.667 0.00 0.00 30.84 2.57
3451 3916 4.380531 GGCCATTAGATCTTGACGATTGA 58.619 43.478 0.00 0.00 30.84 2.57
3452 3917 3.499918 GGGCCATTAGATCTTGACGATTG 59.500 47.826 4.39 0.00 30.84 2.67
3453 3918 3.392616 AGGGCCATTAGATCTTGACGATT 59.607 43.478 6.18 0.00 30.84 3.34
3454 3919 2.975489 AGGGCCATTAGATCTTGACGAT 59.025 45.455 6.18 0.00 34.25 3.73
3455 3920 2.398588 AGGGCCATTAGATCTTGACGA 58.601 47.619 6.18 0.00 0.00 4.20
3456 3921 2.918712 AGGGCCATTAGATCTTGACG 57.081 50.000 6.18 0.00 0.00 4.35
3457 3922 7.001073 AGAATTAAGGGCCATTAGATCTTGAC 58.999 38.462 16.55 4.09 0.00 3.18
3458 3923 7.154191 AGAATTAAGGGCCATTAGATCTTGA 57.846 36.000 16.55 2.68 0.00 3.02
3459 3924 7.040132 GGAAGAATTAAGGGCCATTAGATCTTG 60.040 40.741 28.98 0.00 29.15 3.02
3460 3925 7.007116 GGAAGAATTAAGGGCCATTAGATCTT 58.993 38.462 26.35 26.35 30.45 2.40
3461 3926 6.547402 GGAAGAATTAAGGGCCATTAGATCT 58.453 40.000 16.55 16.55 0.00 2.75
3462 3927 5.412904 CGGAAGAATTAAGGGCCATTAGATC 59.587 44.000 10.18 12.12 0.00 2.75
3463 3928 5.163088 ACGGAAGAATTAAGGGCCATTAGAT 60.163 40.000 10.18 3.25 0.00 1.98
3464 3929 4.165372 ACGGAAGAATTAAGGGCCATTAGA 59.835 41.667 10.18 2.50 0.00 2.10
3465 3930 4.275936 CACGGAAGAATTAAGGGCCATTAG 59.724 45.833 10.18 0.00 0.00 1.73
3466 3931 4.204012 CACGGAAGAATTAAGGGCCATTA 58.796 43.478 5.58 5.58 0.00 1.90
3467 3932 3.023832 CACGGAAGAATTAAGGGCCATT 58.976 45.455 8.18 8.18 0.00 3.16
3468 3933 2.025321 ACACGGAAGAATTAAGGGCCAT 60.025 45.455 6.18 0.00 0.00 4.40
3469 3934 1.353022 ACACGGAAGAATTAAGGGCCA 59.647 47.619 6.18 0.00 0.00 5.36
3470 3935 2.124277 ACACGGAAGAATTAAGGGCC 57.876 50.000 0.00 0.00 0.00 5.80
3471 3936 5.632244 TTAAACACGGAAGAATTAAGGGC 57.368 39.130 0.00 0.00 0.00 5.19
3472 3937 6.033966 GCATTAAACACGGAAGAATTAAGGG 58.966 40.000 0.00 0.00 0.00 3.95
3473 3938 6.747280 CAGCATTAAACACGGAAGAATTAAGG 59.253 38.462 0.00 0.00 0.00 2.69
3474 3939 6.251376 GCAGCATTAAACACGGAAGAATTAAG 59.749 38.462 0.00 0.00 0.00 1.85
3475 3940 6.090129 GCAGCATTAAACACGGAAGAATTAA 58.910 36.000 0.00 0.00 0.00 1.40
3476 3941 5.182190 TGCAGCATTAAACACGGAAGAATTA 59.818 36.000 0.00 0.00 0.00 1.40
3477 3942 4.022416 TGCAGCATTAAACACGGAAGAATT 60.022 37.500 0.00 0.00 0.00 2.17
3478 3943 3.505680 TGCAGCATTAAACACGGAAGAAT 59.494 39.130 0.00 0.00 0.00 2.40
3479 3944 2.881513 TGCAGCATTAAACACGGAAGAA 59.118 40.909 0.00 0.00 0.00 2.52
3480 3945 2.499197 TGCAGCATTAAACACGGAAGA 58.501 42.857 0.00 0.00 0.00 2.87
3481 3946 2.987413 TGCAGCATTAAACACGGAAG 57.013 45.000 0.00 0.00 0.00 3.46
3482 3947 2.606795 GCTTGCAGCATTAAACACGGAA 60.607 45.455 0.00 0.00 41.89 4.30
3483 3948 1.068610 GCTTGCAGCATTAAACACGGA 60.069 47.619 0.00 0.00 41.89 4.69
3484 3949 1.339711 GCTTGCAGCATTAAACACGG 58.660 50.000 0.00 0.00 41.89 4.94
3485 3950 1.335780 TGGCTTGCAGCATTAAACACG 60.336 47.619 0.00 0.00 44.75 4.49
3486 3951 2.061028 GTGGCTTGCAGCATTAAACAC 58.939 47.619 0.00 0.00 44.75 3.32
3487 3952 1.335780 CGTGGCTTGCAGCATTAAACA 60.336 47.619 0.00 0.00 44.75 2.83
3488 3953 1.339711 CGTGGCTTGCAGCATTAAAC 58.660 50.000 0.00 0.00 44.75 2.01
3489 3954 0.388391 GCGTGGCTTGCAGCATTAAA 60.388 50.000 0.00 0.00 44.75 1.52
3490 3955 1.212490 GCGTGGCTTGCAGCATTAA 59.788 52.632 0.00 0.00 44.75 1.40
3491 3956 1.314534 ATGCGTGGCTTGCAGCATTA 61.315 50.000 13.52 0.00 46.75 1.90
3492 3957 2.642254 ATGCGTGGCTTGCAGCATT 61.642 52.632 13.52 3.11 46.75 3.56
3493 3958 3.066190 ATGCGTGGCTTGCAGCAT 61.066 55.556 13.52 13.52 46.98 3.79
3494 3959 1.522302 TTAATGCGTGGCTTGCAGCA 61.522 50.000 9.84 10.73 46.98 4.41
3495 3960 0.799534 CTTAATGCGTGGCTTGCAGC 60.800 55.000 9.84 0.11 46.98 5.25
3496 3961 0.799534 GCTTAATGCGTGGCTTGCAG 60.800 55.000 9.84 0.00 46.98 4.41
3498 3963 1.517039 GGCTTAATGCGTGGCTTGC 60.517 57.895 0.00 0.00 44.05 4.01
3499 3964 0.456653 GTGGCTTAATGCGTGGCTTG 60.457 55.000 0.00 0.00 44.05 4.01
3500 3965 0.609131 AGTGGCTTAATGCGTGGCTT 60.609 50.000 0.00 0.00 44.05 4.35
3501 3966 0.251916 TAGTGGCTTAATGCGTGGCT 59.748 50.000 0.00 0.00 44.05 4.75
3502 3967 0.377203 GTAGTGGCTTAATGCGTGGC 59.623 55.000 0.00 0.00 44.05 5.01
3503 3968 1.732941 TGTAGTGGCTTAATGCGTGG 58.267 50.000 0.00 0.00 44.05 4.94
3504 3969 3.373748 TGATTGTAGTGGCTTAATGCGTG 59.626 43.478 0.00 0.00 44.05 5.34
3505 3970 3.605634 TGATTGTAGTGGCTTAATGCGT 58.394 40.909 0.00 0.00 44.05 5.24
3506 3971 4.614555 TTGATTGTAGTGGCTTAATGCG 57.385 40.909 0.00 0.00 44.05 4.73
3507 3972 4.793216 CGTTTGATTGTAGTGGCTTAATGC 59.207 41.667 0.00 0.00 41.94 3.56
3508 3973 4.793216 GCGTTTGATTGTAGTGGCTTAATG 59.207 41.667 0.00 0.00 0.00 1.90
3509 3974 4.457603 TGCGTTTGATTGTAGTGGCTTAAT 59.542 37.500 0.00 0.00 0.00 1.40
3510 3975 3.815962 TGCGTTTGATTGTAGTGGCTTAA 59.184 39.130 0.00 0.00 0.00 1.85
3511 3976 3.187637 GTGCGTTTGATTGTAGTGGCTTA 59.812 43.478 0.00 0.00 0.00 3.09
3512 3977 2.031157 GTGCGTTTGATTGTAGTGGCTT 60.031 45.455 0.00 0.00 0.00 4.35
3513 3978 1.535462 GTGCGTTTGATTGTAGTGGCT 59.465 47.619 0.00 0.00 0.00 4.75
3514 3979 1.265635 TGTGCGTTTGATTGTAGTGGC 59.734 47.619 0.00 0.00 0.00 5.01
3515 3980 2.350388 GGTGTGCGTTTGATTGTAGTGG 60.350 50.000 0.00 0.00 0.00 4.00
3516 3981 2.548057 AGGTGTGCGTTTGATTGTAGTG 59.452 45.455 0.00 0.00 0.00 2.74
3517 3982 2.806244 GAGGTGTGCGTTTGATTGTAGT 59.194 45.455 0.00 0.00 0.00 2.73
3518 3983 2.159627 GGAGGTGTGCGTTTGATTGTAG 59.840 50.000 0.00 0.00 0.00 2.74
3519 3984 2.147958 GGAGGTGTGCGTTTGATTGTA 58.852 47.619 0.00 0.00 0.00 2.41
3520 3985 0.951558 GGAGGTGTGCGTTTGATTGT 59.048 50.000 0.00 0.00 0.00 2.71
3521 3986 0.950836 TGGAGGTGTGCGTTTGATTG 59.049 50.000 0.00 0.00 0.00 2.67
3522 3987 1.812571 GATGGAGGTGTGCGTTTGATT 59.187 47.619 0.00 0.00 0.00 2.57
3523 3988 1.453155 GATGGAGGTGTGCGTTTGAT 58.547 50.000 0.00 0.00 0.00 2.57
3524 3989 0.948623 CGATGGAGGTGTGCGTTTGA 60.949 55.000 0.00 0.00 0.00 2.69
3525 3990 0.948623 TCGATGGAGGTGTGCGTTTG 60.949 55.000 0.00 0.00 0.00 2.93
3526 3991 0.670546 CTCGATGGAGGTGTGCGTTT 60.671 55.000 0.00 0.00 36.61 3.60
3527 3992 1.079819 CTCGATGGAGGTGTGCGTT 60.080 57.895 0.00 0.00 36.61 4.84
3528 3993 2.214181 GACTCGATGGAGGTGTGCGT 62.214 60.000 9.72 0.00 44.93 5.24
3529 3994 1.517257 GACTCGATGGAGGTGTGCG 60.517 63.158 9.72 0.00 44.93 5.34
3530 3995 0.176680 ATGACTCGATGGAGGTGTGC 59.823 55.000 9.72 0.00 44.93 4.57
3531 3996 1.202463 GGATGACTCGATGGAGGTGTG 60.202 57.143 9.72 0.00 44.93 3.82
3532 3997 1.115467 GGATGACTCGATGGAGGTGT 58.885 55.000 9.72 0.00 44.93 4.16
3533 3998 1.114627 TGGATGACTCGATGGAGGTG 58.885 55.000 9.72 0.00 44.93 4.00
3534 3999 2.094100 ATGGATGACTCGATGGAGGT 57.906 50.000 9.72 0.00 44.93 3.85
3535 4000 3.829026 TCTTATGGATGACTCGATGGAGG 59.171 47.826 9.72 0.00 44.93 4.30
3536 4001 5.459536 TTCTTATGGATGACTCGATGGAG 57.540 43.478 2.78 2.78 46.13 3.86
3537 4002 5.869649 TTTCTTATGGATGACTCGATGGA 57.130 39.130 0.00 0.00 0.00 3.41
3538 4003 6.238484 GGTTTTTCTTATGGATGACTCGATGG 60.238 42.308 0.00 0.00 0.00 3.51
3539 4004 6.510157 CGGTTTTTCTTATGGATGACTCGATG 60.510 42.308 0.00 0.00 0.00 3.84
3540 4005 5.523916 CGGTTTTTCTTATGGATGACTCGAT 59.476 40.000 0.00 0.00 0.00 3.59
3541 4006 4.868171 CGGTTTTTCTTATGGATGACTCGA 59.132 41.667 0.00 0.00 0.00 4.04
3542 4007 4.494199 GCGGTTTTTCTTATGGATGACTCG 60.494 45.833 0.00 0.00 0.00 4.18
3543 4008 4.201920 GGCGGTTTTTCTTATGGATGACTC 60.202 45.833 0.00 0.00 0.00 3.36
3544 4009 3.694566 GGCGGTTTTTCTTATGGATGACT 59.305 43.478 0.00 0.00 0.00 3.41
3545 4010 3.181490 GGGCGGTTTTTCTTATGGATGAC 60.181 47.826 0.00 0.00 0.00 3.06
3546 4011 3.020984 GGGCGGTTTTTCTTATGGATGA 58.979 45.455 0.00 0.00 0.00 2.92
3547 4012 2.100749 GGGGCGGTTTTTCTTATGGATG 59.899 50.000 0.00 0.00 0.00 3.51
3548 4013 2.024369 AGGGGCGGTTTTTCTTATGGAT 60.024 45.455 0.00 0.00 0.00 3.41
3549 4014 1.356398 AGGGGCGGTTTTTCTTATGGA 59.644 47.619 0.00 0.00 0.00 3.41
3550 4015 1.749063 GAGGGGCGGTTTTTCTTATGG 59.251 52.381 0.00 0.00 0.00 2.74
3551 4016 1.400494 CGAGGGGCGGTTTTTCTTATG 59.600 52.381 0.00 0.00 36.03 1.90
3552 4017 1.746470 CGAGGGGCGGTTTTTCTTAT 58.254 50.000 0.00 0.00 36.03 1.73
3553 4018 0.956902 GCGAGGGGCGGTTTTTCTTA 60.957 55.000 0.00 0.00 41.29 2.10
3554 4019 2.265904 GCGAGGGGCGGTTTTTCTT 61.266 57.895 0.00 0.00 41.29 2.52
3555 4020 2.671963 GCGAGGGGCGGTTTTTCT 60.672 61.111 0.00 0.00 41.29 2.52
3565 4030 4.201679 TATCGTGCGTGCGAGGGG 62.202 66.667 9.07 0.00 44.43 4.79
3566 4031 2.954868 GTATCGTGCGTGCGAGGG 60.955 66.667 9.07 0.00 44.43 4.30
3567 4032 2.954868 GGTATCGTGCGTGCGAGG 60.955 66.667 9.07 0.00 44.43 4.63
3568 4033 2.954868 GGGTATCGTGCGTGCGAG 60.955 66.667 9.07 0.00 44.43 5.03
3569 4034 3.750155 TGGGTATCGTGCGTGCGA 61.750 61.111 5.99 5.99 45.32 5.10
3570 4035 3.550992 GTGGGTATCGTGCGTGCG 61.551 66.667 0.00 0.00 0.00 5.34
3571 4036 2.125673 AGTGGGTATCGTGCGTGC 60.126 61.111 0.00 0.00 0.00 5.34
3572 4037 1.872234 CGAGTGGGTATCGTGCGTG 60.872 63.158 0.00 0.00 35.48 5.34
3573 4038 2.488355 CGAGTGGGTATCGTGCGT 59.512 61.111 0.00 0.00 35.48 5.24
3574 4039 2.954868 GCGAGTGGGTATCGTGCG 60.955 66.667 0.00 0.00 42.13 5.34
3575 4040 2.585247 GGCGAGTGGGTATCGTGC 60.585 66.667 0.00 0.00 42.13 5.34
3576 4041 2.028125 ATGGGCGAGTGGGTATCGTG 62.028 60.000 0.00 0.00 42.13 4.35
3577 4042 0.468585 TATGGGCGAGTGGGTATCGT 60.469 55.000 0.00 0.00 42.13 3.73
3578 4043 0.895530 ATATGGGCGAGTGGGTATCG 59.104 55.000 0.00 0.00 43.00 2.92
3579 4044 1.676014 GCATATGGGCGAGTGGGTATC 60.676 57.143 4.56 0.00 0.00 2.24
3580 4045 0.324943 GCATATGGGCGAGTGGGTAT 59.675 55.000 4.56 0.00 0.00 2.73
3581 4046 1.752198 GCATATGGGCGAGTGGGTA 59.248 57.895 4.56 0.00 0.00 3.69
3582 4047 2.510906 GCATATGGGCGAGTGGGT 59.489 61.111 4.56 0.00 0.00 4.51
3583 4048 2.281761 GGCATATGGGCGAGTGGG 60.282 66.667 4.56 0.00 33.57 4.61
3591 4056 3.850098 GAGGGCGGTGGCATATGGG 62.850 68.421 4.56 0.00 42.47 4.00
3592 4057 2.281761 GAGGGCGGTGGCATATGG 60.282 66.667 4.56 0.00 42.47 2.74
3593 4058 2.666190 CGAGGGCGGTGGCATATG 60.666 66.667 0.00 0.00 42.47 1.78
3594 4059 4.626081 GCGAGGGCGGTGGCATAT 62.626 66.667 0.00 0.00 42.47 1.78
3604 4069 4.971125 GTATGGGCGAGCGAGGGC 62.971 72.222 0.00 0.00 40.37 5.19
3605 4070 4.647615 CGTATGGGCGAGCGAGGG 62.648 72.222 0.00 0.00 0.00 4.30
3616 4081 4.910585 GAGGGCGGTGGCGTATGG 62.911 72.222 0.00 0.00 41.24 2.74
3635 4100 3.782443 GTGTAGGGGGTGGGCGAG 61.782 72.222 0.00 0.00 0.00 5.03
3671 4136 3.302347 GAGGAGCGGTGGTGTGAGG 62.302 68.421 0.00 0.00 0.00 3.86
3672 4137 2.262915 GAGGAGCGGTGGTGTGAG 59.737 66.667 0.00 0.00 0.00 3.51
3673 4138 3.311110 GGAGGAGCGGTGGTGTGA 61.311 66.667 0.00 0.00 0.00 3.58
3674 4139 4.742201 CGGAGGAGCGGTGGTGTG 62.742 72.222 0.00 0.00 0.00 3.82
3699 4164 4.783621 TCGCATCTGTGGGGCAGC 62.784 66.667 0.00 0.00 44.66 5.25
3700 4165 1.890979 GATCGCATCTGTGGGGCAG 60.891 63.158 0.00 0.00 46.34 4.85
3701 4166 2.190313 GATCGCATCTGTGGGGCA 59.810 61.111 0.00 0.00 38.70 5.36
3702 4167 2.969238 CGATCGCATCTGTGGGGC 60.969 66.667 0.26 0.00 38.70 5.80
3703 4168 2.969238 GCGATCGCATCTGTGGGG 60.969 66.667 33.89 0.00 41.49 4.96
3704 4169 2.969238 GGCGATCGCATCTGTGGG 60.969 66.667 38.00 0.00 44.11 4.61
3705 4170 3.333189 CGGCGATCGCATCTGTGG 61.333 66.667 38.00 15.58 44.11 4.17
3706 4171 2.167219 AACGGCGATCGCATCTGTG 61.167 57.895 38.00 22.20 44.11 3.66
3707 4172 2.167219 CAACGGCGATCGCATCTGT 61.167 57.895 38.00 26.70 44.11 3.41
3708 4173 2.622629 CAACGGCGATCGCATCTG 59.377 61.111 38.00 26.44 44.11 2.90
3709 4174 3.264897 GCAACGGCGATCGCATCT 61.265 61.111 38.00 20.24 44.11 2.90
3710 4175 4.299316 GGCAACGGCGATCGCATC 62.299 66.667 38.00 22.49 44.11 3.91
3739 4204 2.512515 GGCAGCAACCTAGCGGAG 60.513 66.667 0.00 0.00 40.15 4.63
3740 4205 4.451150 CGGCAGCAACCTAGCGGA 62.451 66.667 0.00 0.00 40.15 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.