Multiple sequence alignment - TraesCS5B01G218100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G218100 chr5B 100.000 2921 0 0 1 2921 391831722 391828802 0.000000e+00 5395.0
1 TraesCS5B01G218100 chr5B 86.420 162 20 2 2402 2562 230883544 230883384 2.990000e-40 176.0
2 TraesCS5B01G218100 chr5A 91.057 1476 71 31 978 2402 436333551 436332086 0.000000e+00 1938.0
3 TraesCS5B01G218100 chr5A 79.832 595 78 28 48 602 436335822 436335230 2.110000e-106 396.0
4 TraesCS5B01G218100 chr5D 96.032 1134 35 6 876 2000 335053103 335051971 0.000000e+00 1836.0
5 TraesCS5B01G218100 chr5D 84.452 566 68 18 53 602 335056757 335056196 9.210000e-150 540.0
6 TraesCS5B01G218100 chr5D 83.742 449 30 21 1989 2402 335051953 335051513 4.570000e-103 385.0
7 TraesCS5B01G218100 chr5D 89.011 273 20 9 603 871 335055761 335055495 2.170000e-86 329.0
8 TraesCS5B01G218100 chr4B 91.971 137 11 0 2428 2564 106227542 106227406 2.970000e-45 193.0
9 TraesCS5B01G218100 chr2D 92.537 134 10 0 2428 2561 79056300 79056167 2.970000e-45 193.0
10 TraesCS5B01G218100 chr2D 87.755 49 5 1 369 417 638722277 638722324 4.070000e-04 56.5
11 TraesCS5B01G218100 chr2A 91.791 134 11 0 2428 2561 141506337 141506470 1.380000e-43 187.0
12 TraesCS5B01G218100 chrUn 91.176 136 12 0 2428 2563 50619858 50619993 4.970000e-43 185.0
13 TraesCS5B01G218100 chrUn 92.500 40 2 1 368 407 156678401 156678439 4.070000e-04 56.5
14 TraesCS5B01G218100 chr3A 90.511 137 12 1 2428 2564 383690952 383691087 2.310000e-41 180.0
15 TraesCS5B01G218100 chr3A 85.714 112 14 2 386 497 145610939 145610830 1.840000e-22 117.0
16 TraesCS5B01G218100 chr1A 87.582 153 17 2 2427 2577 465505112 465505264 2.990000e-40 176.0
17 TraesCS5B01G218100 chr4A 87.662 154 13 4 2413 2565 3081516 3081368 1.080000e-39 174.0
18 TraesCS5B01G218100 chr4A 80.000 115 22 1 383 497 50580014 50580127 1.870000e-12 84.2
19 TraesCS5B01G218100 chr6B 84.746 177 19 4 2390 2565 29261662 29261493 1.390000e-38 171.0
20 TraesCS5B01G218100 chr7D 81.176 170 27 5 281 446 420633169 420633337 6.570000e-27 132.0
21 TraesCS5B01G218100 chr7A 86.538 104 12 2 394 497 32864535 32864434 2.380000e-21 113.0
22 TraesCS5B01G218100 chr7A 82.114 123 19 3 386 507 135621109 135620989 5.150000e-18 102.0
23 TraesCS5B01G218100 chr7A 82.353 85 9 4 384 465 109068643 109068562 5.220000e-08 69.4
24 TraesCS5B01G218100 chr2B 83.838 99 13 3 308 403 377102665 377102763 1.110000e-14 91.6
25 TraesCS5B01G218100 chr3D 83.333 90 12 3 402 490 132924890 132924803 2.410000e-11 80.5
26 TraesCS5B01G218100 chr3D 80.488 82 14 2 385 465 465523109 465523189 8.740000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G218100 chr5B 391828802 391831722 2920 True 5395.0 5395 100.00000 1 2921 1 chr5B.!!$R2 2920
1 TraesCS5B01G218100 chr5A 436332086 436335822 3736 True 1167.0 1938 85.44450 48 2402 2 chr5A.!!$R1 2354
2 TraesCS5B01G218100 chr5D 335051513 335056757 5244 True 772.5 1836 88.30925 53 2402 4 chr5D.!!$R1 2349

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.669318 TGTCGAGGTGAATCAACGGC 60.669 55.0 0.00 0.0 0.0 5.68 F
27 28 0.953471 CGAGGTGAATCAACGGCCAA 60.953 55.0 2.24 0.0 0.0 4.52 F
586 641 1.157585 GACCTCTTTTTCACCGGAGC 58.842 55.0 9.46 0.0 0.0 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1463 5245 0.673956 GTGGTCCTTTTCGAGCTCCC 60.674 60.0 8.47 0.97 0.00 4.30 R
1779 5561 1.890876 CCACCGAACTTTCATCCACA 58.109 50.0 0.00 0.00 0.00 4.17 R
2232 6057 0.909610 AGCCCATCTCGGACCTGAAA 60.910 55.0 0.00 0.00 36.56 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.065993 ACTGTCGAGGTGAATCAACG 57.934 50.000 0.00 0.00 0.00 4.10
23 24 1.336887 ACTGTCGAGGTGAATCAACGG 60.337 52.381 0.00 0.00 0.00 4.44
24 25 0.669318 TGTCGAGGTGAATCAACGGC 60.669 55.000 0.00 0.00 0.00 5.68
25 26 1.079405 TCGAGGTGAATCAACGGCC 60.079 57.895 0.00 0.00 0.00 6.13
26 27 1.375396 CGAGGTGAATCAACGGCCA 60.375 57.895 2.24 0.00 0.00 5.36
27 28 0.953471 CGAGGTGAATCAACGGCCAA 60.953 55.000 2.24 0.00 0.00 4.52
28 29 1.243902 GAGGTGAATCAACGGCCAAA 58.756 50.000 2.24 0.00 0.00 3.28
29 30 1.611491 GAGGTGAATCAACGGCCAAAA 59.389 47.619 2.24 0.00 0.00 2.44
30 31 2.035321 GAGGTGAATCAACGGCCAAAAA 59.965 45.455 2.24 0.00 0.00 1.94
59 60 4.199310 ACTAATCAGCGCATATTGGTGTT 58.801 39.130 18.41 4.99 36.29 3.32
64 65 3.621268 TCAGCGCATATTGGTGTTCTTAC 59.379 43.478 11.47 0.00 36.29 2.34
65 66 2.943033 AGCGCATATTGGTGTTCTTACC 59.057 45.455 11.47 0.00 41.24 2.85
70 71 4.142249 GCATATTGGTGTTCTTACCCAACC 60.142 45.833 0.00 0.00 40.09 3.77
76 77 2.105993 GTGTTCTTACCCAACCTGAGGT 59.894 50.000 0.00 0.00 40.31 3.85
85 86 1.410932 CCAACCTGAGGTTTTGTGGGA 60.411 52.381 15.48 0.00 44.33 4.37
91 92 3.430236 CCTGAGGTTTTGTGGGAAAACAC 60.430 47.826 11.10 6.13 40.78 3.32
109 112 3.953712 CACACTGGTGTAGTACATGGA 57.046 47.619 6.21 0.00 42.83 3.41
156 161 2.270205 CAGGCCAACTCGCAGGAT 59.730 61.111 5.01 0.00 0.00 3.24
297 305 6.548321 TGTGGGGTAATGTGAGAACTAAAAT 58.452 36.000 0.00 0.00 0.00 1.82
442 495 5.880332 TCATGTATGATGCATGATGAGATGG 59.120 40.000 19.94 0.00 45.18 3.51
532 586 2.247358 TCTTCTTTTTGCATCCACCCC 58.753 47.619 0.00 0.00 0.00 4.95
533 587 1.969923 CTTCTTTTTGCATCCACCCCA 59.030 47.619 0.00 0.00 0.00 4.96
561 616 3.441163 CATGAGCAATACACATGGTTGC 58.559 45.455 15.23 15.23 46.37 4.17
574 629 1.352622 TGGTTGCCTGTGGACCTCTT 61.353 55.000 0.00 0.00 34.52 2.85
576 631 1.692411 GTTGCCTGTGGACCTCTTTT 58.308 50.000 0.00 0.00 0.00 2.27
586 641 1.157585 GACCTCTTTTTCACCGGAGC 58.842 55.000 9.46 0.00 0.00 4.70
611 1113 1.671845 ACGAGCGGAGACTGAATAGAC 59.328 52.381 0.00 0.00 0.00 2.59
621 1123 6.072948 CGGAGACTGAATAGACGATCTTACAT 60.073 42.308 0.00 0.00 0.00 2.29
671 1214 5.761726 GTGCTGTGGAGATGATTCATTGATA 59.238 40.000 0.00 0.00 0.00 2.15
690 1385 7.589958 TTGATATGTTTTACACTTGGGTTGT 57.410 32.000 0.00 0.00 0.00 3.32
722 1417 2.162681 AGCTTTTTCTCCCAACCGATG 58.837 47.619 0.00 0.00 0.00 3.84
723 1418 2.159382 GCTTTTTCTCCCAACCGATGA 58.841 47.619 0.00 0.00 0.00 2.92
724 1419 2.162408 GCTTTTTCTCCCAACCGATGAG 59.838 50.000 0.00 0.00 0.00 2.90
727 1422 2.202932 CTCCCAACCGATGAGGCG 60.203 66.667 0.00 0.00 46.52 5.52
728 1423 2.682136 TCCCAACCGATGAGGCGA 60.682 61.111 0.00 0.00 46.52 5.54
729 1424 2.202932 CCCAACCGATGAGGCGAG 60.203 66.667 0.00 0.00 46.52 5.03
730 1425 2.892425 CCAACCGATGAGGCGAGC 60.892 66.667 0.00 0.00 46.52 5.03
731 1426 2.125552 CAACCGATGAGGCGAGCA 60.126 61.111 0.00 0.00 46.52 4.26
732 1427 2.125512 AACCGATGAGGCGAGCAC 60.126 61.111 0.00 0.00 46.52 4.40
740 1435 1.159285 TGAGGCGAGCACTTGAAATG 58.841 50.000 0.00 0.00 0.00 2.32
782 1477 3.346315 CCAAGCATTTTCCCCCATTTTC 58.654 45.455 0.00 0.00 0.00 2.29
793 1488 2.100749 CCCCCATTTTCGATTGCCTTAC 59.899 50.000 0.00 0.00 0.00 2.34
796 1491 4.141959 CCCCATTTTCGATTGCCTTACATT 60.142 41.667 0.00 0.00 0.00 2.71
813 1508 1.658095 CATTATTTGCCGGGTTTTGCG 59.342 47.619 2.18 0.00 0.00 4.85
872 1584 5.845953 CGATCGGACATTGTTATTTACATGC 59.154 40.000 7.38 0.00 36.44 4.06
1009 4782 1.413767 CTTGACGGAGATGGCGTTCG 61.414 60.000 0.00 0.00 0.00 3.95
1152 4925 4.814294 GACGTTCGCTCCCCGCAT 62.814 66.667 0.00 0.00 39.08 4.73
1275 5048 1.833049 CTTCCCTCGTCGCCCCTAT 60.833 63.158 0.00 0.00 0.00 2.57
1309 5082 1.538512 CCACCTACTTCGACGTCTTCA 59.461 52.381 14.70 0.00 0.00 3.02
1437 5210 1.305381 CTGGGAACTCGACCCCTCT 60.305 63.158 7.10 0.00 46.21 3.69
1609 5391 2.358737 AGCTCCAAAAGGCGGACG 60.359 61.111 0.00 0.00 0.00 4.79
1779 5561 0.108138 GAATGGTAGCGGTGCTGAGT 60.108 55.000 2.01 0.00 40.10 3.41
1793 5575 3.058639 GTGCTGAGTGTGGATGAAAGTTC 60.059 47.826 0.00 0.00 0.00 3.01
1808 5590 2.100631 GTTCGGTGGCGATGACAGG 61.101 63.158 0.00 0.00 0.00 4.00
1817 5599 3.717294 GATGACAGGGCCGGTGGT 61.717 66.667 15.83 3.12 0.00 4.16
1878 5660 4.162690 CCGGAGCTGGGCCACTAC 62.163 72.222 0.00 5.11 0.00 2.73
1895 5677 4.005650 CACTACATTGACATGTGGAAGCT 58.994 43.478 1.15 0.00 43.06 3.74
2012 5823 6.430925 CACATTACTGAATTCTTCTTGTCCCA 59.569 38.462 7.05 0.00 0.00 4.37
2055 5873 3.441101 ACTAGTGACTAACAGGGCATGA 58.559 45.455 5.99 0.00 0.00 3.07
2064 5882 3.788227 AACAGGGCATGACAACTAGAA 57.212 42.857 5.99 0.00 0.00 2.10
2066 5884 3.614092 ACAGGGCATGACAACTAGAATG 58.386 45.455 5.99 0.00 0.00 2.67
2072 5890 5.450965 GGGCATGACAACTAGAATGAAATGG 60.451 44.000 0.00 0.00 0.00 3.16
2132 5950 8.543774 ACAAAGTGAGTGGTCTAAATCTATGAT 58.456 33.333 0.00 0.00 0.00 2.45
2151 5969 8.920665 TCTATGATAAATTGTTTTGTTTTGCGG 58.079 29.630 0.00 0.00 0.00 5.69
2152 5970 6.910536 TGATAAATTGTTTTGTTTTGCGGT 57.089 29.167 0.00 0.00 0.00 5.68
2153 5971 8.594881 ATGATAAATTGTTTTGTTTTGCGGTA 57.405 26.923 0.00 0.00 0.00 4.02
2176 5999 9.890629 GGTATATGGATAATGTCTGCTGAAATA 57.109 33.333 0.00 0.00 0.00 1.40
2180 6003 8.789825 ATGGATAATGTCTGCTGAAATATCTC 57.210 34.615 15.10 6.57 0.00 2.75
2230 6055 5.437289 TCACAAATGTAAACTGGCAAGAG 57.563 39.130 0.00 0.00 0.00 2.85
2232 6057 5.769662 TCACAAATGTAAACTGGCAAGAGAT 59.230 36.000 0.00 0.00 0.00 2.75
2233 6058 6.265196 TCACAAATGTAAACTGGCAAGAGATT 59.735 34.615 0.00 0.00 0.00 2.40
2234 6059 6.925165 CACAAATGTAAACTGGCAAGAGATTT 59.075 34.615 0.00 0.00 0.00 2.17
2235 6060 7.115378 CACAAATGTAAACTGGCAAGAGATTTC 59.885 37.037 0.00 0.00 0.00 2.17
2236 6061 6.899393 AATGTAAACTGGCAAGAGATTTCA 57.101 33.333 0.00 0.00 0.00 2.69
2237 6062 5.947228 TGTAAACTGGCAAGAGATTTCAG 57.053 39.130 0.00 0.00 0.00 3.02
2238 6063 4.761739 TGTAAACTGGCAAGAGATTTCAGG 59.238 41.667 0.00 0.00 0.00 3.86
2241 6066 2.290577 ACTGGCAAGAGATTTCAGGTCC 60.291 50.000 0.00 0.00 0.00 4.46
2242 6067 1.339055 TGGCAAGAGATTTCAGGTCCG 60.339 52.381 0.00 0.00 0.00 4.79
2248 6096 2.697751 AGAGATTTCAGGTCCGAGATGG 59.302 50.000 0.00 0.00 40.09 3.51
2268 6116 8.366359 AGATGGGCTGTCAGTTATTTTAAAAT 57.634 30.769 17.18 17.18 0.00 1.82
2269 6117 8.815912 AGATGGGCTGTCAGTTATTTTAAAATT 58.184 29.630 18.14 0.00 0.00 1.82
2275 6123 9.777843 GCTGTCAGTTATTTTAAAATTTGTTCG 57.222 29.630 18.14 4.15 0.00 3.95
2293 6142 8.934507 TTTGTTCGAACACAATTTAATTCCTT 57.065 26.923 29.74 0.00 38.92 3.36
2346 6197 3.473923 CAAAGGTGCTTGGGTTTGATT 57.526 42.857 0.00 0.00 32.65 2.57
2347 6198 3.132925 CAAAGGTGCTTGGGTTTGATTG 58.867 45.455 0.00 0.00 32.65 2.67
2348 6199 2.086610 AGGTGCTTGGGTTTGATTGT 57.913 45.000 0.00 0.00 0.00 2.71
2349 6200 2.397597 AGGTGCTTGGGTTTGATTGTT 58.602 42.857 0.00 0.00 0.00 2.83
2350 6201 2.771372 AGGTGCTTGGGTTTGATTGTTT 59.229 40.909 0.00 0.00 0.00 2.83
2351 6202 3.130633 GGTGCTTGGGTTTGATTGTTTC 58.869 45.455 0.00 0.00 0.00 2.78
2352 6203 3.431486 GGTGCTTGGGTTTGATTGTTTCA 60.431 43.478 0.00 0.00 0.00 2.69
2358 6209 7.011857 TGCTTGGGTTTGATTGTTTCATTTAAC 59.988 33.333 0.00 0.00 33.34 2.01
2393 6244 8.082242 GTGAAGTTTGTGCAACTAAATATTCCT 58.918 33.333 0.00 0.00 45.77 3.36
2394 6245 8.637986 TGAAGTTTGTGCAACTAAATATTCCTT 58.362 29.630 0.00 0.00 45.77 3.36
2410 6261 9.825109 AAATATTCCTTCTTTACTACTCTCTGC 57.175 33.333 0.00 0.00 0.00 4.26
2411 6262 6.859112 ATTCCTTCTTTACTACTCTCTGCA 57.141 37.500 0.00 0.00 0.00 4.41
2412 6263 6.859112 TTCCTTCTTTACTACTCTCTGCAT 57.141 37.500 0.00 0.00 0.00 3.96
2413 6264 6.859112 TCCTTCTTTACTACTCTCTGCATT 57.141 37.500 0.00 0.00 0.00 3.56
2414 6265 6.868622 TCCTTCTTTACTACTCTCTGCATTC 58.131 40.000 0.00 0.00 0.00 2.67
2415 6266 6.437477 TCCTTCTTTACTACTCTCTGCATTCA 59.563 38.462 0.00 0.00 0.00 2.57
2416 6267 6.533367 CCTTCTTTACTACTCTCTGCATTCAC 59.467 42.308 0.00 0.00 0.00 3.18
2417 6268 6.590234 TCTTTACTACTCTCTGCATTCACA 57.410 37.500 0.00 0.00 0.00 3.58
2418 6269 6.993079 TCTTTACTACTCTCTGCATTCACAA 58.007 36.000 0.00 0.00 0.00 3.33
2419 6270 7.441836 TCTTTACTACTCTCTGCATTCACAAA 58.558 34.615 0.00 0.00 0.00 2.83
2420 6271 8.097038 TCTTTACTACTCTCTGCATTCACAAAT 58.903 33.333 0.00 0.00 0.00 2.32
2421 6272 9.371136 CTTTACTACTCTCTGCATTCACAAATA 57.629 33.333 0.00 0.00 0.00 1.40
2422 6273 8.703604 TTACTACTCTCTGCATTCACAAATAC 57.296 34.615 0.00 0.00 0.00 1.89
2423 6274 6.940739 ACTACTCTCTGCATTCACAAATACT 58.059 36.000 0.00 0.00 0.00 2.12
2424 6275 7.038659 ACTACTCTCTGCATTCACAAATACTC 58.961 38.462 0.00 0.00 0.00 2.59
2425 6276 6.047511 ACTCTCTGCATTCACAAATACTCT 57.952 37.500 0.00 0.00 0.00 3.24
2426 6277 5.873712 ACTCTCTGCATTCACAAATACTCTG 59.126 40.000 0.00 0.00 0.00 3.35
2427 6278 5.798132 TCTCTGCATTCACAAATACTCTGT 58.202 37.500 0.00 0.00 0.00 3.41
2428 6279 6.935167 TCTCTGCATTCACAAATACTCTGTA 58.065 36.000 0.00 0.00 0.00 2.74
2429 6280 7.559486 TCTCTGCATTCACAAATACTCTGTAT 58.441 34.615 0.00 0.00 0.00 2.29
2430 6281 8.695456 TCTCTGCATTCACAAATACTCTGTATA 58.305 33.333 0.00 0.00 0.00 1.47
2431 6282 9.317936 CTCTGCATTCACAAATACTCTGTATAA 57.682 33.333 0.00 0.00 0.00 0.98
2432 6283 9.317936 TCTGCATTCACAAATACTCTGTATAAG 57.682 33.333 0.00 0.00 0.00 1.73
2433 6284 9.317936 CTGCATTCACAAATACTCTGTATAAGA 57.682 33.333 0.00 0.00 0.00 2.10
2434 6285 9.836864 TGCATTCACAAATACTCTGTATAAGAT 57.163 29.630 0.00 0.00 33.29 2.40
2468 6319 5.717078 TCCAATATGGACTACATACGGAC 57.283 43.478 0.00 0.00 42.67 4.79
2469 6320 5.391256 TCCAATATGGACTACATACGGACT 58.609 41.667 0.00 0.00 42.67 3.85
2470 6321 5.243060 TCCAATATGGACTACATACGGACTG 59.757 44.000 0.00 0.00 42.67 3.51
2471 6322 5.243060 CCAATATGGACTACATACGGACTGA 59.757 44.000 0.00 0.00 44.41 3.41
2472 6323 6.239204 CCAATATGGACTACATACGGACTGAA 60.239 42.308 0.00 0.00 44.41 3.02
2473 6324 6.971726 ATATGGACTACATACGGACTGAAA 57.028 37.500 0.00 0.00 44.41 2.69
2474 6325 5.871396 ATGGACTACATACGGACTGAAAT 57.129 39.130 0.00 0.00 38.26 2.17
2475 6326 5.670792 TGGACTACATACGGACTGAAATT 57.329 39.130 0.00 0.00 0.00 1.82
2476 6327 6.778834 TGGACTACATACGGACTGAAATTA 57.221 37.500 0.00 0.00 0.00 1.40
2477 6328 7.172868 TGGACTACATACGGACTGAAATTAA 57.827 36.000 0.00 0.00 0.00 1.40
2478 6329 7.788026 TGGACTACATACGGACTGAAATTAAT 58.212 34.615 0.00 0.00 0.00 1.40
2479 6330 7.709182 TGGACTACATACGGACTGAAATTAATG 59.291 37.037 0.00 0.00 0.00 1.90
2480 6331 7.924412 GGACTACATACGGACTGAAATTAATGA 59.076 37.037 0.00 0.00 0.00 2.57
2481 6332 9.309516 GACTACATACGGACTGAAATTAATGAA 57.690 33.333 0.00 0.00 0.00 2.57
2482 6333 9.095065 ACTACATACGGACTGAAATTAATGAAC 57.905 33.333 0.00 0.00 0.00 3.18
2483 6334 7.915293 ACATACGGACTGAAATTAATGAACA 57.085 32.000 0.00 0.00 0.00 3.18
2484 6335 8.330466 ACATACGGACTGAAATTAATGAACAA 57.670 30.769 0.00 0.00 0.00 2.83
2485 6336 8.788806 ACATACGGACTGAAATTAATGAACAAA 58.211 29.630 0.00 0.00 0.00 2.83
2486 6337 9.061610 CATACGGACTGAAATTAATGAACAAAC 57.938 33.333 0.00 0.00 0.00 2.93
2487 6338 7.033530 ACGGACTGAAATTAATGAACAAACA 57.966 32.000 0.00 0.00 0.00 2.83
2488 6339 6.915843 ACGGACTGAAATTAATGAACAAACAC 59.084 34.615 0.00 0.00 0.00 3.32
2489 6340 6.915300 CGGACTGAAATTAATGAACAAACACA 59.085 34.615 0.00 0.00 0.00 3.72
2490 6341 7.096640 CGGACTGAAATTAATGAACAAACACAC 60.097 37.037 0.00 0.00 0.00 3.82
2491 6342 7.920682 GGACTGAAATTAATGAACAAACACACT 59.079 33.333 0.00 0.00 0.00 3.55
2492 6343 9.944663 GACTGAAATTAATGAACAAACACACTA 57.055 29.630 0.00 0.00 0.00 2.74
2493 6344 9.730420 ACTGAAATTAATGAACAAACACACTAC 57.270 29.630 0.00 0.00 0.00 2.73
2494 6345 9.729023 CTGAAATTAATGAACAAACACACTACA 57.271 29.630 0.00 0.00 0.00 2.74
2497 6348 9.862371 AAATTAATGAACAAACACACTACAACA 57.138 25.926 0.00 0.00 0.00 3.33
2499 6350 8.848948 TTAATGAACAAACACACTACAACATG 57.151 30.769 0.00 0.00 0.00 3.21
2500 6351 4.667262 TGAACAAACACACTACAACATGC 58.333 39.130 0.00 0.00 0.00 4.06
2501 6352 3.708563 ACAAACACACTACAACATGCC 57.291 42.857 0.00 0.00 0.00 4.40
2502 6353 3.287222 ACAAACACACTACAACATGCCT 58.713 40.909 0.00 0.00 0.00 4.75
2503 6354 3.699038 ACAAACACACTACAACATGCCTT 59.301 39.130 0.00 0.00 0.00 4.35
2504 6355 4.159506 ACAAACACACTACAACATGCCTTT 59.840 37.500 0.00 0.00 0.00 3.11
2505 6356 5.358442 ACAAACACACTACAACATGCCTTTA 59.642 36.000 0.00 0.00 0.00 1.85
2506 6357 6.040391 ACAAACACACTACAACATGCCTTTAT 59.960 34.615 0.00 0.00 0.00 1.40
2507 6358 7.229707 ACAAACACACTACAACATGCCTTTATA 59.770 33.333 0.00 0.00 0.00 0.98
2508 6359 6.737254 ACACACTACAACATGCCTTTATAC 57.263 37.500 0.00 0.00 0.00 1.47
2509 6360 6.234920 ACACACTACAACATGCCTTTATACA 58.765 36.000 0.00 0.00 0.00 2.29
2510 6361 6.884295 ACACACTACAACATGCCTTTATACAT 59.116 34.615 0.00 0.00 0.00 2.29
2511 6362 7.065803 ACACACTACAACATGCCTTTATACATC 59.934 37.037 0.00 0.00 0.00 3.06
2512 6363 7.280876 CACACTACAACATGCCTTTATACATCT 59.719 37.037 0.00 0.00 0.00 2.90
2513 6364 7.280876 ACACTACAACATGCCTTTATACATCTG 59.719 37.037 0.00 0.00 0.00 2.90
2514 6365 7.495606 CACTACAACATGCCTTTATACATCTGA 59.504 37.037 0.00 0.00 0.00 3.27
2515 6366 8.213679 ACTACAACATGCCTTTATACATCTGAT 58.786 33.333 0.00 0.00 0.00 2.90
2516 6367 7.886629 ACAACATGCCTTTATACATCTGATT 57.113 32.000 0.00 0.00 0.00 2.57
2517 6368 7.934457 ACAACATGCCTTTATACATCTGATTC 58.066 34.615 0.00 0.00 0.00 2.52
2518 6369 7.557358 ACAACATGCCTTTATACATCTGATTCA 59.443 33.333 0.00 0.00 0.00 2.57
2519 6370 7.741027 ACATGCCTTTATACATCTGATTCAG 57.259 36.000 7.38 7.38 0.00 3.02
2520 6371 6.713903 ACATGCCTTTATACATCTGATTCAGG 59.286 38.462 13.59 1.40 31.51 3.86
2521 6372 6.499106 TGCCTTTATACATCTGATTCAGGA 57.501 37.500 13.59 1.54 31.51 3.86
2522 6373 6.899089 TGCCTTTATACATCTGATTCAGGAA 58.101 36.000 13.59 0.00 31.51 3.36
2523 6374 7.345691 TGCCTTTATACATCTGATTCAGGAAA 58.654 34.615 13.59 0.00 31.51 3.13
2524 6375 7.833682 TGCCTTTATACATCTGATTCAGGAAAA 59.166 33.333 13.59 5.28 31.51 2.29
2525 6376 8.686334 GCCTTTATACATCTGATTCAGGAAAAA 58.314 33.333 13.59 5.85 31.51 1.94
2532 6383 8.924511 ACATCTGATTCAGGAAAAAGTTAGAA 57.075 30.769 13.59 0.00 31.51 2.10
2533 6384 8.787852 ACATCTGATTCAGGAAAAAGTTAGAAC 58.212 33.333 13.59 0.00 31.51 3.01
2534 6385 8.786898 CATCTGATTCAGGAAAAAGTTAGAACA 58.213 33.333 13.59 0.00 31.51 3.18
2535 6386 8.924511 TCTGATTCAGGAAAAAGTTAGAACAT 57.075 30.769 13.59 0.00 31.51 2.71
2536 6387 9.003658 TCTGATTCAGGAAAAAGTTAGAACATC 57.996 33.333 13.59 0.00 31.51 3.06
2537 6388 8.924511 TGATTCAGGAAAAAGTTAGAACATCT 57.075 30.769 0.00 0.00 0.00 2.90
2538 6389 9.354673 TGATTCAGGAAAAAGTTAGAACATCTT 57.645 29.630 0.00 0.00 0.00 2.40
2552 6403 9.916397 GTTAGAACATCTTATATTTGTGAACGG 57.084 33.333 0.00 0.00 0.00 4.44
2553 6404 9.878667 TTAGAACATCTTATATTTGTGAACGGA 57.121 29.630 0.00 0.00 0.00 4.69
2554 6405 8.425577 AGAACATCTTATATTTGTGAACGGAG 57.574 34.615 0.00 0.00 0.00 4.63
2555 6406 7.495934 AGAACATCTTATATTTGTGAACGGAGG 59.504 37.037 0.00 0.00 0.00 4.30
2556 6407 6.055588 ACATCTTATATTTGTGAACGGAGGG 58.944 40.000 0.00 0.00 0.00 4.30
2557 6408 5.943349 TCTTATATTTGTGAACGGAGGGA 57.057 39.130 0.00 0.00 0.00 4.20
2558 6409 5.914033 TCTTATATTTGTGAACGGAGGGAG 58.086 41.667 0.00 0.00 0.00 4.30
2559 6410 5.424252 TCTTATATTTGTGAACGGAGGGAGT 59.576 40.000 0.00 0.00 0.00 3.85
2560 6411 6.608405 TCTTATATTTGTGAACGGAGGGAGTA 59.392 38.462 0.00 0.00 0.00 2.59
2561 6412 3.611766 ATTTGTGAACGGAGGGAGTAG 57.388 47.619 0.00 0.00 0.00 2.57
2562 6413 2.005370 TTGTGAACGGAGGGAGTAGT 57.995 50.000 0.00 0.00 0.00 2.73
2563 6414 2.005370 TGTGAACGGAGGGAGTAGTT 57.995 50.000 0.00 0.00 0.00 2.24
2564 6415 2.322658 TGTGAACGGAGGGAGTAGTTT 58.677 47.619 0.00 0.00 0.00 2.66
2565 6416 2.036733 TGTGAACGGAGGGAGTAGTTTG 59.963 50.000 0.00 0.00 0.00 2.93
2566 6417 2.036862 GTGAACGGAGGGAGTAGTTTGT 59.963 50.000 0.00 0.00 0.00 2.83
2567 6418 3.256631 GTGAACGGAGGGAGTAGTTTGTA 59.743 47.826 0.00 0.00 0.00 2.41
2568 6419 3.508793 TGAACGGAGGGAGTAGTTTGTAG 59.491 47.826 0.00 0.00 0.00 2.74
2569 6420 1.823610 ACGGAGGGAGTAGTTTGTAGC 59.176 52.381 0.00 0.00 0.00 3.58
2570 6421 2.100989 CGGAGGGAGTAGTTTGTAGCT 58.899 52.381 0.00 0.00 0.00 3.32
2571 6422 3.285484 CGGAGGGAGTAGTTTGTAGCTA 58.715 50.000 0.00 0.00 0.00 3.32
2572 6423 3.890147 CGGAGGGAGTAGTTTGTAGCTAT 59.110 47.826 0.00 0.00 0.00 2.97
2573 6424 4.341520 CGGAGGGAGTAGTTTGTAGCTATT 59.658 45.833 0.00 0.00 0.00 1.73
2574 6425 5.507650 CGGAGGGAGTAGTTTGTAGCTATTC 60.508 48.000 0.00 0.00 0.00 1.75
2575 6426 5.363005 GGAGGGAGTAGTTTGTAGCTATTCA 59.637 44.000 0.00 0.00 30.01 2.57
2576 6427 6.223351 AGGGAGTAGTTTGTAGCTATTCAC 57.777 41.667 0.00 0.00 31.34 3.18
2577 6428 5.958987 AGGGAGTAGTTTGTAGCTATTCACT 59.041 40.000 0.00 1.89 35.15 3.41
2578 6429 7.124052 AGGGAGTAGTTTGTAGCTATTCACTA 58.876 38.462 0.00 0.89 37.22 2.74
2579 6430 7.068470 AGGGAGTAGTTTGTAGCTATTCACTAC 59.932 40.741 20.96 20.96 37.22 2.73
2580 6431 7.147949 GGGAGTAGTTTGTAGCTATTCACTACA 60.148 40.741 25.75 9.64 46.23 2.74
2588 6439 7.962964 TGTAGCTATTCACTACAATTATGGC 57.037 36.000 0.00 0.00 45.24 4.40
2589 6440 6.934645 TGTAGCTATTCACTACAATTATGGCC 59.065 38.462 0.00 0.00 45.24 5.36
2590 6441 5.940617 AGCTATTCACTACAATTATGGCCA 58.059 37.500 8.56 8.56 0.00 5.36
2591 6442 5.765182 AGCTATTCACTACAATTATGGCCAC 59.235 40.000 8.16 0.00 0.00 5.01
2592 6443 5.765182 GCTATTCACTACAATTATGGCCACT 59.235 40.000 8.16 0.00 0.00 4.00
2593 6444 6.293626 GCTATTCACTACAATTATGGCCACTG 60.294 42.308 8.16 5.95 0.00 3.66
2594 6445 4.835284 TCACTACAATTATGGCCACTGA 57.165 40.909 8.16 0.00 0.00 3.41
2595 6446 5.372343 TCACTACAATTATGGCCACTGAT 57.628 39.130 8.16 0.00 0.00 2.90
2596 6447 6.493189 TCACTACAATTATGGCCACTGATA 57.507 37.500 8.16 0.00 0.00 2.15
2597 6448 6.894682 TCACTACAATTATGGCCACTGATAA 58.105 36.000 8.16 2.57 0.00 1.75
2598 6449 7.517320 TCACTACAATTATGGCCACTGATAAT 58.483 34.615 8.16 5.40 0.00 1.28
2599 6450 8.655901 TCACTACAATTATGGCCACTGATAATA 58.344 33.333 8.16 0.00 0.00 0.98
2600 6451 8.939929 CACTACAATTATGGCCACTGATAATAG 58.060 37.037 8.16 7.83 0.00 1.73
2601 6452 6.824305 ACAATTATGGCCACTGATAATAGC 57.176 37.500 8.16 0.00 0.00 2.97
2602 6453 6.306199 ACAATTATGGCCACTGATAATAGCA 58.694 36.000 8.16 0.00 0.00 3.49
2603 6454 6.950041 ACAATTATGGCCACTGATAATAGCAT 59.050 34.615 8.16 0.00 0.00 3.79
2604 6455 8.108999 ACAATTATGGCCACTGATAATAGCATA 58.891 33.333 8.16 0.00 0.00 3.14
2605 6456 8.959548 CAATTATGGCCACTGATAATAGCATAA 58.040 33.333 8.16 0.00 0.00 1.90
2606 6457 9.532494 AATTATGGCCACTGATAATAGCATAAA 57.468 29.630 8.16 0.00 0.00 1.40
2607 6458 8.932434 TTATGGCCACTGATAATAGCATAAAA 57.068 30.769 8.16 0.00 0.00 1.52
2608 6459 9.532494 TTATGGCCACTGATAATAGCATAAAAT 57.468 29.630 8.16 0.00 0.00 1.82
2609 6460 7.452880 TGGCCACTGATAATAGCATAAAATC 57.547 36.000 0.00 0.00 0.00 2.17
2610 6461 6.434028 TGGCCACTGATAATAGCATAAAATCC 59.566 38.462 0.00 0.00 0.00 3.01
2611 6462 6.434028 GGCCACTGATAATAGCATAAAATCCA 59.566 38.462 0.00 0.00 0.00 3.41
2612 6463 7.362401 GGCCACTGATAATAGCATAAAATCCAG 60.362 40.741 0.00 0.00 0.00 3.86
2613 6464 7.391554 GCCACTGATAATAGCATAAAATCCAGA 59.608 37.037 0.00 0.00 0.00 3.86
2614 6465 9.458727 CCACTGATAATAGCATAAAATCCAGAT 57.541 33.333 0.00 0.00 0.00 2.90
2618 6469 9.591792 TGATAATAGCATAAAATCCAGATCTCG 57.408 33.333 0.00 0.00 0.00 4.04
2619 6470 9.593134 GATAATAGCATAAAATCCAGATCTCGT 57.407 33.333 0.00 0.00 0.00 4.18
2620 6471 9.950496 ATAATAGCATAAAATCCAGATCTCGTT 57.050 29.630 0.00 0.00 0.00 3.85
2621 6472 8.682936 AATAGCATAAAATCCAGATCTCGTTT 57.317 30.769 0.00 0.00 0.00 3.60
2622 6473 6.369059 AGCATAAAATCCAGATCTCGTTTG 57.631 37.500 0.00 0.00 0.00 2.93
2623 6474 5.882557 AGCATAAAATCCAGATCTCGTTTGT 59.117 36.000 0.00 0.00 0.00 2.83
2624 6475 7.047891 AGCATAAAATCCAGATCTCGTTTGTA 58.952 34.615 0.00 0.00 0.00 2.41
2625 6476 7.011482 AGCATAAAATCCAGATCTCGTTTGTAC 59.989 37.037 0.00 0.00 0.00 2.90
2626 6477 7.201609 GCATAAAATCCAGATCTCGTTTGTACA 60.202 37.037 0.00 0.00 0.00 2.90
2627 6478 8.664798 CATAAAATCCAGATCTCGTTTGTACAA 58.335 33.333 3.59 3.59 0.00 2.41
2628 6479 7.504924 AAAATCCAGATCTCGTTTGTACAAA 57.495 32.000 17.01 17.01 0.00 2.83
2629 6480 6.481954 AATCCAGATCTCGTTTGTACAAAC 57.518 37.500 32.43 32.43 45.25 2.93
2630 6481 5.209818 TCCAGATCTCGTTTGTACAAACT 57.790 39.130 35.97 24.07 46.21 2.66
2631 6482 4.988540 TCCAGATCTCGTTTGTACAAACTG 59.011 41.667 35.97 29.93 46.21 3.16
2632 6483 4.750098 CCAGATCTCGTTTGTACAAACTGT 59.250 41.667 35.97 23.73 46.21 3.55
2633 6484 5.333339 CCAGATCTCGTTTGTACAAACTGTG 60.333 44.000 35.97 29.08 46.21 3.66
2634 6485 4.750098 AGATCTCGTTTGTACAAACTGTGG 59.250 41.667 35.97 25.34 46.21 4.17
2635 6486 3.864243 TCTCGTTTGTACAAACTGTGGT 58.136 40.909 35.97 0.00 46.21 4.16
2636 6487 3.619483 TCTCGTTTGTACAAACTGTGGTG 59.381 43.478 35.97 24.50 46.21 4.17
2637 6488 3.597255 TCGTTTGTACAAACTGTGGTGA 58.403 40.909 35.97 25.91 46.21 4.02
2638 6489 4.193090 TCGTTTGTACAAACTGTGGTGAT 58.807 39.130 35.97 0.00 46.21 3.06
2639 6490 4.636648 TCGTTTGTACAAACTGTGGTGATT 59.363 37.500 35.97 0.00 46.21 2.57
2640 6491 5.124138 TCGTTTGTACAAACTGTGGTGATTT 59.876 36.000 35.97 0.00 46.21 2.17
2641 6492 5.454232 CGTTTGTACAAACTGTGGTGATTTC 59.546 40.000 35.97 15.27 46.21 2.17
2642 6493 5.508200 TTGTACAAACTGTGGTGATTTCC 57.492 39.130 5.64 0.00 0.00 3.13
2643 6494 4.787551 TGTACAAACTGTGGTGATTTCCT 58.212 39.130 0.00 0.00 0.00 3.36
2644 6495 5.197451 TGTACAAACTGTGGTGATTTCCTT 58.803 37.500 0.00 0.00 0.00 3.36
2645 6496 4.654091 ACAAACTGTGGTGATTTCCTTG 57.346 40.909 0.00 0.00 0.00 3.61
2646 6497 3.181476 ACAAACTGTGGTGATTTCCTTGC 60.181 43.478 0.00 0.00 0.00 4.01
2647 6498 2.664402 ACTGTGGTGATTTCCTTGCT 57.336 45.000 0.00 0.00 0.00 3.91
2648 6499 3.788227 ACTGTGGTGATTTCCTTGCTA 57.212 42.857 0.00 0.00 0.00 3.49
2649 6500 3.679389 ACTGTGGTGATTTCCTTGCTAG 58.321 45.455 0.00 0.00 0.00 3.42
2650 6501 3.073062 ACTGTGGTGATTTCCTTGCTAGT 59.927 43.478 0.00 0.00 0.00 2.57
2651 6502 4.286032 ACTGTGGTGATTTCCTTGCTAGTA 59.714 41.667 0.00 0.00 0.00 1.82
2652 6503 5.221843 ACTGTGGTGATTTCCTTGCTAGTAA 60.222 40.000 0.00 0.00 0.00 2.24
2653 6504 5.001232 TGTGGTGATTTCCTTGCTAGTAAC 58.999 41.667 0.00 0.00 0.00 2.50
2654 6505 5.221843 TGTGGTGATTTCCTTGCTAGTAACT 60.222 40.000 0.00 0.00 0.00 2.24
2655 6506 5.705905 GTGGTGATTTCCTTGCTAGTAACTT 59.294 40.000 0.00 0.00 0.00 2.66
2656 6507 5.938125 TGGTGATTTCCTTGCTAGTAACTTC 59.062 40.000 0.00 0.00 0.00 3.01
2657 6508 6.174049 GGTGATTTCCTTGCTAGTAACTTCT 58.826 40.000 0.00 0.00 0.00 2.85
2658 6509 6.092807 GGTGATTTCCTTGCTAGTAACTTCTG 59.907 42.308 0.00 0.00 0.00 3.02
2659 6510 6.874134 GTGATTTCCTTGCTAGTAACTTCTGA 59.126 38.462 0.00 0.00 0.00 3.27
2660 6511 7.550906 GTGATTTCCTTGCTAGTAACTTCTGAT 59.449 37.037 0.00 0.00 0.00 2.90
2661 6512 7.550551 TGATTTCCTTGCTAGTAACTTCTGATG 59.449 37.037 0.00 0.00 0.00 3.07
2662 6513 6.360370 TTCCTTGCTAGTAACTTCTGATGT 57.640 37.500 0.00 0.00 0.00 3.06
2663 6514 5.724328 TCCTTGCTAGTAACTTCTGATGTG 58.276 41.667 0.00 0.00 0.00 3.21
2664 6515 4.331168 CCTTGCTAGTAACTTCTGATGTGC 59.669 45.833 0.00 0.00 0.00 4.57
2665 6516 4.808414 TGCTAGTAACTTCTGATGTGCT 57.192 40.909 0.00 2.52 0.00 4.40
2666 6517 4.498241 TGCTAGTAACTTCTGATGTGCTG 58.502 43.478 0.00 0.00 0.00 4.41
2667 6518 4.220602 TGCTAGTAACTTCTGATGTGCTGA 59.779 41.667 0.00 0.00 0.00 4.26
2668 6519 5.105187 TGCTAGTAACTTCTGATGTGCTGAT 60.105 40.000 0.00 0.00 0.00 2.90
2669 6520 5.814705 GCTAGTAACTTCTGATGTGCTGATT 59.185 40.000 0.00 0.00 0.00 2.57
2670 6521 6.238049 GCTAGTAACTTCTGATGTGCTGATTG 60.238 42.308 0.00 0.00 0.00 2.67
2671 6522 4.940046 AGTAACTTCTGATGTGCTGATTGG 59.060 41.667 0.00 0.00 0.00 3.16
2672 6523 3.430042 ACTTCTGATGTGCTGATTGGT 57.570 42.857 0.00 0.00 0.00 3.67
2673 6524 4.558226 ACTTCTGATGTGCTGATTGGTA 57.442 40.909 0.00 0.00 0.00 3.25
2674 6525 5.108187 ACTTCTGATGTGCTGATTGGTAT 57.892 39.130 0.00 0.00 0.00 2.73
2675 6526 5.503927 ACTTCTGATGTGCTGATTGGTATT 58.496 37.500 0.00 0.00 0.00 1.89
2676 6527 5.948162 ACTTCTGATGTGCTGATTGGTATTT 59.052 36.000 0.00 0.00 0.00 1.40
2677 6528 5.823209 TCTGATGTGCTGATTGGTATTTG 57.177 39.130 0.00 0.00 0.00 2.32
2678 6529 4.096833 TCTGATGTGCTGATTGGTATTTGC 59.903 41.667 0.00 0.00 0.00 3.68
2679 6530 4.018490 TGATGTGCTGATTGGTATTTGCT 58.982 39.130 0.00 0.00 0.00 3.91
2680 6531 3.853831 TGTGCTGATTGGTATTTGCTG 57.146 42.857 0.00 0.00 0.00 4.41
2681 6532 3.156293 TGTGCTGATTGGTATTTGCTGT 58.844 40.909 0.00 0.00 0.00 4.40
2682 6533 3.191162 TGTGCTGATTGGTATTTGCTGTC 59.809 43.478 0.00 0.00 0.00 3.51
2683 6534 3.441572 GTGCTGATTGGTATTTGCTGTCT 59.558 43.478 0.00 0.00 0.00 3.41
2684 6535 4.635765 GTGCTGATTGGTATTTGCTGTCTA 59.364 41.667 0.00 0.00 0.00 2.59
2685 6536 5.123820 GTGCTGATTGGTATTTGCTGTCTAA 59.876 40.000 0.00 0.00 0.00 2.10
2686 6537 5.355071 TGCTGATTGGTATTTGCTGTCTAAG 59.645 40.000 0.00 0.00 0.00 2.18
2687 6538 5.220931 GCTGATTGGTATTTGCTGTCTAAGG 60.221 44.000 0.00 0.00 0.00 2.69
2688 6539 5.815581 TGATTGGTATTTGCTGTCTAAGGT 58.184 37.500 0.00 0.00 0.00 3.50
2689 6540 5.647658 TGATTGGTATTTGCTGTCTAAGGTG 59.352 40.000 0.00 0.00 0.00 4.00
2690 6541 4.901197 TGGTATTTGCTGTCTAAGGTGA 57.099 40.909 0.00 0.00 0.00 4.02
2691 6542 5.235850 TGGTATTTGCTGTCTAAGGTGAA 57.764 39.130 0.00 0.00 0.00 3.18
2692 6543 5.626142 TGGTATTTGCTGTCTAAGGTGAAA 58.374 37.500 0.00 0.00 0.00 2.69
2693 6544 6.245408 TGGTATTTGCTGTCTAAGGTGAAAT 58.755 36.000 0.00 0.00 0.00 2.17
2694 6545 6.719370 TGGTATTTGCTGTCTAAGGTGAAATT 59.281 34.615 0.00 0.00 0.00 1.82
2695 6546 7.232534 TGGTATTTGCTGTCTAAGGTGAAATTT 59.767 33.333 0.00 0.00 0.00 1.82
2696 6547 8.088365 GGTATTTGCTGTCTAAGGTGAAATTTT 58.912 33.333 0.00 0.00 0.00 1.82
2697 6548 9.129209 GTATTTGCTGTCTAAGGTGAAATTTTC 57.871 33.333 2.05 2.05 0.00 2.29
2698 6549 6.959639 TTGCTGTCTAAGGTGAAATTTTCT 57.040 33.333 10.33 0.00 0.00 2.52
2699 6550 8.458573 TTTGCTGTCTAAGGTGAAATTTTCTA 57.541 30.769 10.33 0.00 0.00 2.10
2700 6551 8.635765 TTGCTGTCTAAGGTGAAATTTTCTAT 57.364 30.769 10.33 0.00 0.00 1.98
2701 6552 9.733556 TTGCTGTCTAAGGTGAAATTTTCTATA 57.266 29.630 10.33 0.00 0.00 1.31
2702 6553 9.905713 TGCTGTCTAAGGTGAAATTTTCTATAT 57.094 29.630 10.33 0.00 0.00 0.86
2725 6576 7.823745 ATTTTGACAGTACAATTCTGGAAGT 57.176 32.000 0.00 0.00 37.25 3.01
2726 6577 6.618287 TTTGACAGTACAATTCTGGAAGTG 57.382 37.500 8.87 8.87 41.61 3.16
2727 6578 4.641396 TGACAGTACAATTCTGGAAGTGG 58.359 43.478 13.86 0.93 40.33 4.00
2728 6579 4.346709 TGACAGTACAATTCTGGAAGTGGA 59.653 41.667 13.86 3.92 40.33 4.02
2729 6580 4.899502 ACAGTACAATTCTGGAAGTGGAG 58.100 43.478 13.86 0.00 40.33 3.86
2730 6581 4.593206 ACAGTACAATTCTGGAAGTGGAGA 59.407 41.667 13.86 0.00 40.33 3.71
2731 6582 5.071788 ACAGTACAATTCTGGAAGTGGAGAA 59.928 40.000 13.86 0.00 40.33 2.87
2732 6583 5.997746 CAGTACAATTCTGGAAGTGGAGAAA 59.002 40.000 13.86 0.00 40.33 2.52
2733 6584 6.656693 CAGTACAATTCTGGAAGTGGAGAAAT 59.343 38.462 13.86 0.00 40.33 2.17
2734 6585 7.175641 CAGTACAATTCTGGAAGTGGAGAAATT 59.824 37.037 13.86 0.00 40.33 1.82
2735 6586 6.983906 ACAATTCTGGAAGTGGAGAAATTT 57.016 33.333 13.86 0.00 40.33 1.82
2736 6587 6.752168 ACAATTCTGGAAGTGGAGAAATTTG 58.248 36.000 13.86 0.00 40.33 2.32
2737 6588 5.990120 ATTCTGGAAGTGGAGAAATTTGG 57.010 39.130 0.00 0.00 32.07 3.28
2738 6589 3.766545 TCTGGAAGTGGAGAAATTTGGG 58.233 45.455 0.00 0.00 33.76 4.12
2739 6590 3.397618 TCTGGAAGTGGAGAAATTTGGGA 59.602 43.478 0.00 0.00 33.76 4.37
2740 6591 4.044571 TCTGGAAGTGGAGAAATTTGGGAT 59.955 41.667 0.00 0.00 33.76 3.85
2741 6592 4.750941 TGGAAGTGGAGAAATTTGGGATT 58.249 39.130 0.00 0.00 0.00 3.01
2742 6593 5.154418 TGGAAGTGGAGAAATTTGGGATTT 58.846 37.500 0.00 0.00 0.00 2.17
2743 6594 5.606329 TGGAAGTGGAGAAATTTGGGATTTT 59.394 36.000 0.00 0.00 0.00 1.82
2744 6595 6.101005 TGGAAGTGGAGAAATTTGGGATTTTT 59.899 34.615 0.00 0.00 0.00 1.94
2766 6617 7.935338 TTTTTCAGCTGCTTTCTCAATTAAG 57.065 32.000 9.47 0.00 0.00 1.85
2767 6618 6.639632 TTTCAGCTGCTTTCTCAATTAAGT 57.360 33.333 9.47 0.00 0.00 2.24
2768 6619 5.869753 TCAGCTGCTTTCTCAATTAAGTC 57.130 39.130 9.47 0.00 0.00 3.01
2769 6620 5.555017 TCAGCTGCTTTCTCAATTAAGTCT 58.445 37.500 9.47 0.00 0.00 3.24
2770 6621 5.641209 TCAGCTGCTTTCTCAATTAAGTCTC 59.359 40.000 9.47 0.00 0.00 3.36
2771 6622 5.410746 CAGCTGCTTTCTCAATTAAGTCTCA 59.589 40.000 0.00 0.00 0.00 3.27
2772 6623 5.411053 AGCTGCTTTCTCAATTAAGTCTCAC 59.589 40.000 0.00 0.00 0.00 3.51
2773 6624 5.180117 GCTGCTTTCTCAATTAAGTCTCACA 59.820 40.000 0.00 0.00 0.00 3.58
2774 6625 6.545504 TGCTTTCTCAATTAAGTCTCACAC 57.454 37.500 0.00 0.00 0.00 3.82
2775 6626 6.291377 TGCTTTCTCAATTAAGTCTCACACT 58.709 36.000 0.00 0.00 36.64 3.55
2776 6627 6.203530 TGCTTTCTCAATTAAGTCTCACACTG 59.796 38.462 0.00 0.00 34.56 3.66
2777 6628 6.545504 TTTCTCAATTAAGTCTCACACTGC 57.454 37.500 0.00 0.00 34.56 4.40
2778 6629 5.474578 TCTCAATTAAGTCTCACACTGCT 57.525 39.130 0.00 0.00 34.56 4.24
2779 6630 5.858381 TCTCAATTAAGTCTCACACTGCTT 58.142 37.500 0.00 0.00 34.56 3.91
2780 6631 5.698089 TCTCAATTAAGTCTCACACTGCTTG 59.302 40.000 0.00 0.00 34.56 4.01
2781 6632 4.214119 TCAATTAAGTCTCACACTGCTTGC 59.786 41.667 0.00 0.00 34.56 4.01
2782 6633 3.475566 TTAAGTCTCACACTGCTTGCT 57.524 42.857 0.00 0.00 34.56 3.91
2783 6634 1.590932 AAGTCTCACACTGCTTGCTG 58.409 50.000 0.00 0.00 34.56 4.41
2784 6635 0.883814 AGTCTCACACTGCTTGCTGC 60.884 55.000 0.00 0.00 43.25 5.25
2799 6650 6.523676 GCTTGCTGCAATTTTTGTACTTAA 57.476 33.333 16.38 0.00 42.31 1.85
2800 6651 6.584056 GCTTGCTGCAATTTTTGTACTTAAG 58.416 36.000 16.38 0.00 42.31 1.85
2801 6652 6.200854 GCTTGCTGCAATTTTTGTACTTAAGT 59.799 34.615 16.38 13.68 42.31 2.24
2802 6653 7.254421 GCTTGCTGCAATTTTTGTACTTAAGTT 60.254 33.333 16.38 0.00 42.31 2.66
2803 6654 7.692908 TGCTGCAATTTTTGTACTTAAGTTC 57.307 32.000 14.49 9.48 0.00 3.01
2804 6655 7.261325 TGCTGCAATTTTTGTACTTAAGTTCA 58.739 30.769 14.49 12.31 0.00 3.18
2805 6656 7.761704 TGCTGCAATTTTTGTACTTAAGTTCAA 59.238 29.630 20.01 20.01 34.31 2.69
2806 6657 8.764287 GCTGCAATTTTTGTACTTAAGTTCAAT 58.236 29.630 23.18 10.13 35.72 2.57
2808 6659 8.547069 TGCAATTTTTGTACTTAAGTTCAATGC 58.453 29.630 27.25 27.25 37.72 3.56
2809 6660 8.547069 GCAATTTTTGTACTTAAGTTCAATGCA 58.453 29.630 28.11 17.56 37.45 3.96
2813 6664 9.646427 TTTTTGTACTTAAGTTCAATGCAAAGT 57.354 25.926 23.18 0.00 35.72 2.66
2826 6677 9.983804 GTTCAATGCAAAGTATAGTAACTAACC 57.016 33.333 0.00 0.00 0.00 2.85
2827 6678 9.727859 TTCAATGCAAAGTATAGTAACTAACCA 57.272 29.630 0.00 0.00 0.00 3.67
2828 6679 9.727859 TCAATGCAAAGTATAGTAACTAACCAA 57.272 29.630 0.00 0.00 0.00 3.67
2829 6680 9.988350 CAATGCAAAGTATAGTAACTAACCAAG 57.012 33.333 0.00 0.00 0.00 3.61
2830 6681 9.734984 AATGCAAAGTATAGTAACTAACCAAGT 57.265 29.630 0.00 0.00 41.49 3.16
2832 6683 9.211485 TGCAAAGTATAGTAACTAACCAAGTTC 57.789 33.333 0.00 0.00 45.64 3.01
2833 6684 9.211485 GCAAAGTATAGTAACTAACCAAGTTCA 57.789 33.333 0.00 0.00 45.64 3.18
2841 6692 8.113173 AGTAACTAACCAAGTTCAAAACAACA 57.887 30.769 0.00 0.00 45.64 3.33
2842 6693 8.578151 AGTAACTAACCAAGTTCAAAACAACAA 58.422 29.630 0.00 0.00 45.64 2.83
2843 6694 7.883229 AACTAACCAAGTTCAAAACAACAAG 57.117 32.000 0.00 0.00 45.64 3.16
2844 6695 6.394809 ACTAACCAAGTTCAAAACAACAAGG 58.605 36.000 0.00 0.00 33.35 3.61
2845 6696 4.882842 ACCAAGTTCAAAACAACAAGGT 57.117 36.364 0.00 0.00 33.35 3.50
2846 6697 5.222079 ACCAAGTTCAAAACAACAAGGTT 57.778 34.783 0.00 0.00 34.05 3.50
2847 6698 5.234752 ACCAAGTTCAAAACAACAAGGTTC 58.765 37.500 0.00 0.00 34.05 3.62
2848 6699 4.326009 CCAAGTTCAAAACAACAAGGTTCG 59.674 41.667 0.00 0.00 0.00 3.95
2849 6700 3.507786 AGTTCAAAACAACAAGGTTCGC 58.492 40.909 0.00 0.00 0.00 4.70
2850 6701 3.057174 AGTTCAAAACAACAAGGTTCGCA 60.057 39.130 0.00 0.00 0.00 5.10
2851 6702 3.791973 TCAAAACAACAAGGTTCGCAT 57.208 38.095 0.00 0.00 0.00 4.73
2852 6703 3.701241 TCAAAACAACAAGGTTCGCATC 58.299 40.909 0.00 0.00 0.00 3.91
2853 6704 2.793278 AAACAACAAGGTTCGCATCC 57.207 45.000 0.00 0.00 0.00 3.51
2854 6705 1.981256 AACAACAAGGTTCGCATCCT 58.019 45.000 0.00 0.00 36.81 3.24
2855 6706 1.981256 ACAACAAGGTTCGCATCCTT 58.019 45.000 0.00 0.00 44.93 3.36
2856 6707 2.306847 ACAACAAGGTTCGCATCCTTT 58.693 42.857 1.98 0.00 42.57 3.11
2857 6708 2.693074 ACAACAAGGTTCGCATCCTTTT 59.307 40.909 1.98 0.00 42.57 2.27
2858 6709 3.132111 ACAACAAGGTTCGCATCCTTTTT 59.868 39.130 1.98 0.61 42.57 1.94
2859 6710 4.339814 ACAACAAGGTTCGCATCCTTTTTA 59.660 37.500 1.98 0.00 42.57 1.52
2860 6711 5.163499 ACAACAAGGTTCGCATCCTTTTTAA 60.163 36.000 1.98 0.00 42.57 1.52
2861 6712 5.121221 ACAAGGTTCGCATCCTTTTTAAG 57.879 39.130 1.98 0.00 42.57 1.85
2862 6713 3.850122 AGGTTCGCATCCTTTTTAAGC 57.150 42.857 0.00 0.00 30.18 3.09
2863 6714 3.421844 AGGTTCGCATCCTTTTTAAGCT 58.578 40.909 0.00 0.00 30.18 3.74
2864 6715 3.440522 AGGTTCGCATCCTTTTTAAGCTC 59.559 43.478 0.00 0.00 30.18 4.09
2865 6716 3.190535 GGTTCGCATCCTTTTTAAGCTCA 59.809 43.478 0.00 0.00 0.00 4.26
2866 6717 4.142381 GGTTCGCATCCTTTTTAAGCTCAT 60.142 41.667 0.00 0.00 0.00 2.90
2867 6718 4.621068 TCGCATCCTTTTTAAGCTCATG 57.379 40.909 0.00 0.00 0.00 3.07
2868 6719 3.378112 TCGCATCCTTTTTAAGCTCATGG 59.622 43.478 0.00 0.00 0.00 3.66
2869 6720 3.489738 CGCATCCTTTTTAAGCTCATGGG 60.490 47.826 0.00 0.00 0.00 4.00
2870 6721 3.701040 GCATCCTTTTTAAGCTCATGGGA 59.299 43.478 0.00 0.00 0.00 4.37
2871 6722 4.160252 GCATCCTTTTTAAGCTCATGGGAA 59.840 41.667 0.00 0.00 0.00 3.97
2872 6723 5.337491 GCATCCTTTTTAAGCTCATGGGAAA 60.337 40.000 0.00 0.00 0.00 3.13
2873 6724 6.700352 CATCCTTTTTAAGCTCATGGGAAAA 58.300 36.000 0.00 0.00 0.00 2.29
2874 6725 6.739331 TCCTTTTTAAGCTCATGGGAAAAA 57.261 33.333 0.00 0.00 0.00 1.94
2901 6752 9.683069 AACAGCATTCATTTAACTGTCTAAAAG 57.317 29.630 0.00 0.00 40.55 2.27
2902 6753 8.299570 ACAGCATTCATTTAACTGTCTAAAAGG 58.700 33.333 0.00 0.00 36.95 3.11
2903 6754 8.299570 CAGCATTCATTTAACTGTCTAAAAGGT 58.700 33.333 0.00 0.00 0.00 3.50
2904 6755 8.860088 AGCATTCATTTAACTGTCTAAAAGGTT 58.140 29.630 0.00 0.00 0.00 3.50
2914 6765 8.747538 AACTGTCTAAAAGGTTACATTGAAGT 57.252 30.769 0.00 0.00 0.00 3.01
2915 6766 8.747538 ACTGTCTAAAAGGTTACATTGAAGTT 57.252 30.769 0.00 0.00 0.00 2.66
2916 6767 8.837389 ACTGTCTAAAAGGTTACATTGAAGTTC 58.163 33.333 0.00 0.00 0.00 3.01
2917 6768 8.740123 TGTCTAAAAGGTTACATTGAAGTTCA 57.260 30.769 0.08 0.08 0.00 3.18
2918 6769 9.349713 TGTCTAAAAGGTTACATTGAAGTTCAT 57.650 29.630 6.36 0.00 0.00 2.57
2919 6770 9.612620 GTCTAAAAGGTTACATTGAAGTTCATG 57.387 33.333 6.36 9.60 0.00 3.07
2920 6771 9.349713 TCTAAAAGGTTACATTGAAGTTCATGT 57.650 29.630 18.55 18.55 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.408704 CGTTGATTCACCTCGACAGTTC 59.591 50.000 0.00 0.00 31.02 3.01
2 3 2.404215 CGTTGATTCACCTCGACAGTT 58.596 47.619 0.00 0.00 31.02 3.16
3 4 1.336887 CCGTTGATTCACCTCGACAGT 60.337 52.381 6.64 0.00 31.02 3.55
4 5 1.350193 CCGTTGATTCACCTCGACAG 58.650 55.000 6.64 0.00 31.02 3.51
5 6 0.669318 GCCGTTGATTCACCTCGACA 60.669 55.000 6.64 0.00 31.02 4.35
6 7 1.359459 GGCCGTTGATTCACCTCGAC 61.359 60.000 0.00 0.00 0.00 4.20
7 8 1.079405 GGCCGTTGATTCACCTCGA 60.079 57.895 0.00 0.00 0.00 4.04
8 9 0.953471 TTGGCCGTTGATTCACCTCG 60.953 55.000 0.00 0.00 0.00 4.63
9 10 1.243902 TTTGGCCGTTGATTCACCTC 58.756 50.000 0.00 0.00 0.00 3.85
10 11 1.698506 TTTTGGCCGTTGATTCACCT 58.301 45.000 0.00 0.00 0.00 4.00
11 12 2.517650 TTTTTGGCCGTTGATTCACC 57.482 45.000 0.00 0.00 0.00 4.02
29 30 8.292448 CCAATATGCGCTGATTAGTCTATTTTT 58.708 33.333 9.73 0.00 0.00 1.94
30 31 7.445402 ACCAATATGCGCTGATTAGTCTATTTT 59.555 33.333 9.73 0.00 0.00 1.82
31 32 6.936900 ACCAATATGCGCTGATTAGTCTATTT 59.063 34.615 9.73 0.00 0.00 1.40
32 33 6.369890 CACCAATATGCGCTGATTAGTCTATT 59.630 38.462 9.73 0.00 0.00 1.73
33 34 5.871524 CACCAATATGCGCTGATTAGTCTAT 59.128 40.000 9.73 0.00 0.00 1.98
34 35 5.221441 ACACCAATATGCGCTGATTAGTCTA 60.221 40.000 9.73 0.00 0.00 2.59
35 36 4.060900 CACCAATATGCGCTGATTAGTCT 58.939 43.478 9.73 0.00 0.00 3.24
36 37 3.809832 ACACCAATATGCGCTGATTAGTC 59.190 43.478 9.73 0.00 0.00 2.59
37 38 3.808728 ACACCAATATGCGCTGATTAGT 58.191 40.909 9.73 4.52 0.00 2.24
38 39 4.512944 AGAACACCAATATGCGCTGATTAG 59.487 41.667 9.73 3.85 0.00 1.73
39 40 4.450976 AGAACACCAATATGCGCTGATTA 58.549 39.130 9.73 0.00 0.00 1.75
40 41 3.282021 AGAACACCAATATGCGCTGATT 58.718 40.909 9.73 5.14 0.00 2.57
41 42 2.923121 AGAACACCAATATGCGCTGAT 58.077 42.857 9.73 0.00 0.00 2.90
42 43 2.401583 AGAACACCAATATGCGCTGA 57.598 45.000 9.73 0.00 0.00 4.26
43 44 3.242739 GGTAAGAACACCAATATGCGCTG 60.243 47.826 9.73 0.00 38.55 5.18
44 45 2.943033 GGTAAGAACACCAATATGCGCT 59.057 45.455 9.73 0.00 38.55 5.92
45 46 2.032924 GGGTAAGAACACCAATATGCGC 59.967 50.000 0.00 0.00 40.65 6.09
46 47 3.275143 TGGGTAAGAACACCAATATGCG 58.725 45.455 0.00 0.00 40.65 4.73
59 60 3.203487 ACAAAACCTCAGGTTGGGTAAGA 59.797 43.478 10.77 0.00 46.20 2.10
64 65 1.039856 CCACAAAACCTCAGGTTGGG 58.960 55.000 10.77 8.06 46.20 4.12
65 66 1.039856 CCCACAAAACCTCAGGTTGG 58.960 55.000 10.77 7.67 46.20 3.77
70 71 3.194542 TGTGTTTTCCCACAAAACCTCAG 59.805 43.478 7.34 0.00 42.13 3.35
76 77 2.900546 ACCAGTGTGTTTTCCCACAAAA 59.099 40.909 0.00 0.00 46.22 2.44
91 92 2.565391 TGGTCCATGTACTACACCAGTG 59.435 50.000 0.00 0.00 38.24 3.66
99 102 9.391006 GAAATACTTGATTTGGTCCATGTACTA 57.609 33.333 0.00 0.00 37.90 1.82
109 112 3.426615 TGCGGGAAATACTTGATTTGGT 58.573 40.909 0.00 0.00 37.90 3.67
156 161 5.126222 TGATTACTCGCATTATTTTTGGGCA 59.874 36.000 0.00 0.00 0.00 5.36
267 275 3.716353 TCTCACATTACCCCACATATGCT 59.284 43.478 1.58 0.00 0.00 3.79
318 335 9.616156 TTTCATGCCAATAAAATAATCAAGCAT 57.384 25.926 0.00 0.00 38.88 3.79
373 426 7.908827 TGCAAACATGCATGAGAATTTTTAT 57.091 28.000 32.75 3.33 40.23 1.40
423 476 4.295141 TGCCATCTCATCATGCATCATA 57.705 40.909 0.00 0.00 0.00 2.15
497 550 8.662141 GCAAAAAGAAGATGATGCATATTTTGT 58.338 29.630 0.00 0.00 37.48 2.83
498 551 8.661257 TGCAAAAAGAAGATGATGCATATTTTG 58.339 29.630 0.00 8.62 38.73 2.44
511 564 2.833943 GGGGTGGATGCAAAAAGAAGAT 59.166 45.455 0.00 0.00 0.00 2.40
532 586 5.299582 TGTGTATTGCTCATGTCATGTTG 57.700 39.130 12.54 8.16 0.00 3.33
533 587 5.163591 CCATGTGTATTGCTCATGTCATGTT 60.164 40.000 12.54 0.00 43.67 2.71
561 616 2.230660 GGTGAAAAAGAGGTCCACAGG 58.769 52.381 0.00 0.00 0.00 4.00
574 629 0.941542 CGTTGAAGCTCCGGTGAAAA 59.058 50.000 7.92 0.00 0.00 2.29
576 631 0.319555 CTCGTTGAAGCTCCGGTGAA 60.320 55.000 7.92 0.00 0.00 3.18
586 641 0.241213 TCAGTCTCCGCTCGTTGAAG 59.759 55.000 0.00 0.00 0.00 3.02
611 1113 4.450419 GGGAGCATTCAGAATGTAAGATCG 59.550 45.833 21.82 0.00 41.01 3.69
646 1189 2.014335 TGAATCATCTCCACAGCACG 57.986 50.000 0.00 0.00 0.00 5.34
650 1193 7.981102 ACATATCAATGAATCATCTCCACAG 57.019 36.000 0.00 0.00 36.54 3.66
671 1214 4.282496 TCCACAACCCAAGTGTAAAACAT 58.718 39.130 0.00 0.00 35.24 2.71
678 1221 2.745968 ACATTTCCACAACCCAAGTGT 58.254 42.857 0.00 0.00 35.24 3.55
680 1223 3.642141 AGAACATTTCCACAACCCAAGT 58.358 40.909 0.00 0.00 0.00 3.16
681 1224 4.321230 GCTAGAACATTTCCACAACCCAAG 60.321 45.833 0.00 0.00 0.00 3.61
690 1385 5.476945 GGGAGAAAAAGCTAGAACATTTCCA 59.523 40.000 0.00 0.00 31.91 3.53
722 1417 1.135859 CACATTTCAAGTGCTCGCCTC 60.136 52.381 0.00 0.00 0.00 4.70
723 1418 0.877071 CACATTTCAAGTGCTCGCCT 59.123 50.000 0.00 0.00 0.00 5.52
724 1419 0.109597 CCACATTTCAAGTGCTCGCC 60.110 55.000 0.00 0.00 35.69 5.54
725 1420 0.109597 CCCACATTTCAAGTGCTCGC 60.110 55.000 0.00 0.00 35.69 5.03
727 1422 1.270550 CACCCCACATTTCAAGTGCTC 59.729 52.381 0.00 0.00 35.69 4.26
728 1423 1.331214 CACCCCACATTTCAAGTGCT 58.669 50.000 0.00 0.00 35.69 4.40
729 1424 0.318120 CCACCCCACATTTCAAGTGC 59.682 55.000 0.00 0.00 35.69 4.40
730 1425 0.968405 CCCACCCCACATTTCAAGTG 59.032 55.000 0.00 0.00 36.76 3.16
731 1426 0.560688 ACCCACCCCACATTTCAAGT 59.439 50.000 0.00 0.00 0.00 3.16
732 1427 0.968405 CACCCACCCCACATTTCAAG 59.032 55.000 0.00 0.00 0.00 3.02
740 1435 3.230990 GGCAAACACCCACCCCAC 61.231 66.667 0.00 0.00 0.00 4.61
773 1468 2.757868 TGTAAGGCAATCGAAAATGGGG 59.242 45.455 0.00 0.00 0.00 4.96
782 1477 3.974401 CGGCAAATAATGTAAGGCAATCG 59.026 43.478 0.00 0.00 0.00 3.34
793 1488 1.658095 CGCAAAACCCGGCAAATAATG 59.342 47.619 0.00 0.00 0.00 1.90
796 1491 0.674534 AACGCAAAACCCGGCAAATA 59.325 45.000 0.00 0.00 0.00 1.40
813 1508 7.859377 CACATTAGTTTGGCATCAGATATCAAC 59.141 37.037 5.32 0.00 0.00 3.18
872 1584 4.158394 AGCATACTGCCCAACACAAATTAG 59.842 41.667 0.00 0.00 46.52 1.73
1152 4925 2.507547 GCGACGCGGATGTGGTTA 60.508 61.111 12.47 0.00 0.00 2.85
1236 5009 2.047274 ACGGAGTGGATGTTGCCG 60.047 61.111 0.00 0.00 42.51 5.69
1275 5048 2.840753 GGTGGAAGTGAGGGGGCAA 61.841 63.158 0.00 0.00 0.00 4.52
1463 5245 0.673956 GTGGTCCTTTTCGAGCTCCC 60.674 60.000 8.47 0.97 0.00 4.30
1651 5433 2.870372 GCCGCAGTTCACCATCAC 59.130 61.111 0.00 0.00 0.00 3.06
1779 5561 1.890876 CCACCGAACTTTCATCCACA 58.109 50.000 0.00 0.00 0.00 4.17
1878 5660 3.752747 TGTACAGCTTCCACATGTCAATG 59.247 43.478 0.00 0.00 39.89 2.82
1895 5677 4.593956 TGTATCACCATTGCCATTGTACA 58.406 39.130 0.00 0.00 0.00 2.90
1962 5744 4.388773 TGCGCTTACTTACAGAAATCACTG 59.611 41.667 9.73 0.00 42.78 3.66
2012 5823 9.388506 CTAGTCAATGACTTCCAAGAATGTATT 57.611 33.333 21.83 0.00 40.28 1.89
2132 5950 8.926710 CCATATACCGCAAAACAAAACAATTTA 58.073 29.630 0.00 0.00 0.00 1.40
2143 5961 7.298122 CAGACATTATCCATATACCGCAAAAC 58.702 38.462 0.00 0.00 0.00 2.43
2145 5963 5.411361 GCAGACATTATCCATATACCGCAAA 59.589 40.000 0.00 0.00 0.00 3.68
2147 5965 4.222810 AGCAGACATTATCCATATACCGCA 59.777 41.667 0.00 0.00 0.00 5.69
2148 5966 4.568359 CAGCAGACATTATCCATATACCGC 59.432 45.833 0.00 0.00 0.00 5.68
2149 5967 5.965922 TCAGCAGACATTATCCATATACCG 58.034 41.667 0.00 0.00 0.00 4.02
2176 5999 9.232473 CATTGATTTATCATCTGGTCATGAGAT 57.768 33.333 0.00 0.00 36.22 2.75
2180 6003 7.860872 CACACATTGATTTATCATCTGGTCATG 59.139 37.037 0.00 0.00 36.56 3.07
2221 6046 2.363683 GGACCTGAAATCTCTTGCCAG 58.636 52.381 0.00 0.00 0.00 4.85
2230 6055 1.811941 GCCCATCTCGGACCTGAAATC 60.812 57.143 0.00 0.00 36.56 2.17
2232 6057 0.909610 AGCCCATCTCGGACCTGAAA 60.910 55.000 0.00 0.00 36.56 2.69
2233 6058 1.306141 AGCCCATCTCGGACCTGAA 60.306 57.895 0.00 0.00 36.56 3.02
2234 6059 2.060383 CAGCCCATCTCGGACCTGA 61.060 63.158 0.00 0.00 36.54 3.86
2235 6060 2.303549 GACAGCCCATCTCGGACCTG 62.304 65.000 0.00 0.00 38.90 4.00
2236 6061 2.039624 ACAGCCCATCTCGGACCT 59.960 61.111 0.00 0.00 36.56 3.85
2237 6062 2.303549 CTGACAGCCCATCTCGGACC 62.304 65.000 0.00 0.00 36.56 4.46
2238 6063 1.142748 CTGACAGCCCATCTCGGAC 59.857 63.158 0.00 0.00 36.56 4.79
2241 6066 2.898729 ATAACTGACAGCCCATCTCG 57.101 50.000 1.25 0.00 0.00 4.04
2242 6067 7.391148 TTTAAAATAACTGACAGCCCATCTC 57.609 36.000 1.25 0.00 0.00 2.75
2268 6116 8.934507 AAGGAATTAAATTGTGTTCGAACAAA 57.065 26.923 31.20 24.50 42.98 2.83
2269 6117 8.191446 TGAAGGAATTAAATTGTGTTCGAACAA 58.809 29.630 31.20 18.23 43.82 2.83
2301 6150 6.239714 GCTCTCCTCCATTTGAGATAATACCA 60.240 42.308 0.00 0.00 44.42 3.25
2336 6187 8.970859 AATGTTAAATGAAACAATCAAACCCA 57.029 26.923 0.00 0.00 42.33 4.51
2358 6209 6.695245 GTTGCACAAACTTCACTAACAAATG 58.305 36.000 0.00 0.00 35.75 2.32
2375 6226 9.515226 AGTAAAGAAGGAATATTTAGTTGCACA 57.485 29.630 0.00 0.00 26.51 4.57
2390 6241 6.437477 TGAATGCAGAGAGTAGTAAAGAAGGA 59.563 38.462 0.00 0.00 0.00 3.36
2393 6244 6.993079 TGTGAATGCAGAGAGTAGTAAAGAA 58.007 36.000 0.00 0.00 0.00 2.52
2394 6245 6.590234 TGTGAATGCAGAGAGTAGTAAAGA 57.410 37.500 0.00 0.00 0.00 2.52
2402 6253 5.873712 CAGAGTATTTGTGAATGCAGAGAGT 59.126 40.000 0.00 0.00 31.13 3.24
2403 6254 5.873712 ACAGAGTATTTGTGAATGCAGAGAG 59.126 40.000 0.00 0.00 31.13 3.20
2404 6255 5.798132 ACAGAGTATTTGTGAATGCAGAGA 58.202 37.500 0.00 0.00 31.13 3.10
2405 6256 7.783090 ATACAGAGTATTTGTGAATGCAGAG 57.217 36.000 0.00 0.00 31.13 3.35
2406 6257 9.317936 CTTATACAGAGTATTTGTGAATGCAGA 57.682 33.333 0.00 0.00 31.13 4.26
2407 6258 9.317936 TCTTATACAGAGTATTTGTGAATGCAG 57.682 33.333 0.00 0.00 31.13 4.41
2408 6259 9.836864 ATCTTATACAGAGTATTTGTGAATGCA 57.163 29.630 0.00 0.00 33.87 3.96
2446 6297 5.243060 CAGTCCGTATGTAGTCCATATTGGA 59.757 44.000 0.00 0.00 45.98 3.53
2447 6298 5.243060 TCAGTCCGTATGTAGTCCATATTGG 59.757 44.000 0.00 0.00 38.29 3.16
2448 6299 6.327279 TCAGTCCGTATGTAGTCCATATTG 57.673 41.667 0.00 0.00 38.29 1.90
2449 6300 6.971726 TTCAGTCCGTATGTAGTCCATATT 57.028 37.500 0.00 0.00 38.29 1.28
2450 6301 6.971726 TTTCAGTCCGTATGTAGTCCATAT 57.028 37.500 0.00 0.00 38.29 1.78
2451 6302 6.971726 ATTTCAGTCCGTATGTAGTCCATA 57.028 37.500 0.00 0.00 34.86 2.74
2452 6303 5.871396 ATTTCAGTCCGTATGTAGTCCAT 57.129 39.130 0.00 0.00 37.58 3.41
2453 6304 5.670792 AATTTCAGTCCGTATGTAGTCCA 57.329 39.130 0.00 0.00 0.00 4.02
2454 6305 7.924412 TCATTAATTTCAGTCCGTATGTAGTCC 59.076 37.037 0.00 0.00 0.00 3.85
2455 6306 8.867112 TCATTAATTTCAGTCCGTATGTAGTC 57.133 34.615 0.00 0.00 0.00 2.59
2456 6307 9.095065 GTTCATTAATTTCAGTCCGTATGTAGT 57.905 33.333 0.00 0.00 0.00 2.73
2457 6308 9.093970 TGTTCATTAATTTCAGTCCGTATGTAG 57.906 33.333 0.00 0.00 0.00 2.74
2458 6309 9.438228 TTGTTCATTAATTTCAGTCCGTATGTA 57.562 29.630 0.00 0.00 0.00 2.29
2459 6310 7.915293 TGTTCATTAATTTCAGTCCGTATGT 57.085 32.000 0.00 0.00 0.00 2.29
2460 6311 9.061610 GTTTGTTCATTAATTTCAGTCCGTATG 57.938 33.333 0.00 0.00 0.00 2.39
2461 6312 8.788806 TGTTTGTTCATTAATTTCAGTCCGTAT 58.211 29.630 0.00 0.00 0.00 3.06
2462 6313 8.071368 GTGTTTGTTCATTAATTTCAGTCCGTA 58.929 33.333 0.00 0.00 0.00 4.02
2463 6314 6.915843 GTGTTTGTTCATTAATTTCAGTCCGT 59.084 34.615 0.00 0.00 0.00 4.69
2464 6315 6.915300 TGTGTTTGTTCATTAATTTCAGTCCG 59.085 34.615 0.00 0.00 0.00 4.79
2465 6316 7.920682 AGTGTGTTTGTTCATTAATTTCAGTCC 59.079 33.333 0.00 0.00 0.00 3.85
2466 6317 8.856490 AGTGTGTTTGTTCATTAATTTCAGTC 57.144 30.769 0.00 0.00 0.00 3.51
2467 6318 9.730420 GTAGTGTGTTTGTTCATTAATTTCAGT 57.270 29.630 0.00 0.00 0.00 3.41
2468 6319 9.729023 TGTAGTGTGTTTGTTCATTAATTTCAG 57.271 29.630 0.00 0.00 0.00 3.02
2471 6322 9.862371 TGTTGTAGTGTGTTTGTTCATTAATTT 57.138 25.926 0.00 0.00 0.00 1.82
2473 6324 9.462174 CATGTTGTAGTGTGTTTGTTCATTAAT 57.538 29.630 0.00 0.00 0.00 1.40
2474 6325 7.433719 GCATGTTGTAGTGTGTTTGTTCATTAA 59.566 33.333 0.00 0.00 0.00 1.40
2475 6326 6.915300 GCATGTTGTAGTGTGTTTGTTCATTA 59.085 34.615 0.00 0.00 0.00 1.90
2476 6327 5.748152 GCATGTTGTAGTGTGTTTGTTCATT 59.252 36.000 0.00 0.00 0.00 2.57
2477 6328 5.280945 GCATGTTGTAGTGTGTTTGTTCAT 58.719 37.500 0.00 0.00 0.00 2.57
2478 6329 4.439426 GGCATGTTGTAGTGTGTTTGTTCA 60.439 41.667 0.00 0.00 0.00 3.18
2479 6330 4.041723 GGCATGTTGTAGTGTGTTTGTTC 58.958 43.478 0.00 0.00 0.00 3.18
2480 6331 3.699038 AGGCATGTTGTAGTGTGTTTGTT 59.301 39.130 0.00 0.00 0.00 2.83
2481 6332 3.287222 AGGCATGTTGTAGTGTGTTTGT 58.713 40.909 0.00 0.00 0.00 2.83
2482 6333 3.988379 AGGCATGTTGTAGTGTGTTTG 57.012 42.857 0.00 0.00 0.00 2.93
2483 6334 6.648879 ATAAAGGCATGTTGTAGTGTGTTT 57.351 33.333 0.00 0.00 0.00 2.83
2484 6335 6.712998 TGTATAAAGGCATGTTGTAGTGTGTT 59.287 34.615 0.00 0.00 0.00 3.32
2485 6336 6.234920 TGTATAAAGGCATGTTGTAGTGTGT 58.765 36.000 0.00 0.00 0.00 3.72
2486 6337 6.735678 TGTATAAAGGCATGTTGTAGTGTG 57.264 37.500 0.00 0.00 0.00 3.82
2487 6338 7.280876 CAGATGTATAAAGGCATGTTGTAGTGT 59.719 37.037 0.00 0.00 0.00 3.55
2488 6339 7.495606 TCAGATGTATAAAGGCATGTTGTAGTG 59.504 37.037 0.00 0.00 0.00 2.74
2489 6340 7.564793 TCAGATGTATAAAGGCATGTTGTAGT 58.435 34.615 0.00 0.00 0.00 2.73
2490 6341 8.613060 ATCAGATGTATAAAGGCATGTTGTAG 57.387 34.615 0.00 0.00 0.00 2.74
2491 6342 8.978874 AATCAGATGTATAAAGGCATGTTGTA 57.021 30.769 0.00 0.00 0.00 2.41
2492 6343 7.557358 TGAATCAGATGTATAAAGGCATGTTGT 59.443 33.333 0.00 0.00 0.00 3.32
2493 6344 7.933396 TGAATCAGATGTATAAAGGCATGTTG 58.067 34.615 0.00 0.00 0.00 3.33
2494 6345 7.230108 CCTGAATCAGATGTATAAAGGCATGTT 59.770 37.037 12.53 0.00 32.44 2.71
2495 6346 6.713903 CCTGAATCAGATGTATAAAGGCATGT 59.286 38.462 12.53 0.00 32.44 3.21
2496 6347 6.938596 TCCTGAATCAGATGTATAAAGGCATG 59.061 38.462 12.53 0.00 32.44 4.06
2497 6348 7.083062 TCCTGAATCAGATGTATAAAGGCAT 57.917 36.000 12.53 0.00 32.44 4.40
2498 6349 6.499106 TCCTGAATCAGATGTATAAAGGCA 57.501 37.500 12.53 0.00 32.44 4.75
2499 6350 7.807977 TTTCCTGAATCAGATGTATAAAGGC 57.192 36.000 12.53 0.00 32.44 4.35
2507 6358 8.787852 GTTCTAACTTTTTCCTGAATCAGATGT 58.212 33.333 12.53 0.00 32.44 3.06
2508 6359 8.786898 TGTTCTAACTTTTTCCTGAATCAGATG 58.213 33.333 12.53 0.00 32.44 2.90
2509 6360 8.924511 TGTTCTAACTTTTTCCTGAATCAGAT 57.075 30.769 12.53 0.00 32.44 2.90
2510 6361 8.924511 ATGTTCTAACTTTTTCCTGAATCAGA 57.075 30.769 12.53 0.00 32.44 3.27
2511 6362 9.007901 AGATGTTCTAACTTTTTCCTGAATCAG 57.992 33.333 2.68 2.68 0.00 2.90
2512 6363 8.924511 AGATGTTCTAACTTTTTCCTGAATCA 57.075 30.769 0.00 0.00 0.00 2.57
2526 6377 9.916397 CCGTTCACAAATATAAGATGTTCTAAC 57.084 33.333 0.00 0.00 0.00 2.34
2527 6378 9.878667 TCCGTTCACAAATATAAGATGTTCTAA 57.121 29.630 0.00 0.00 0.00 2.10
2528 6379 9.529325 CTCCGTTCACAAATATAAGATGTTCTA 57.471 33.333 0.00 0.00 0.00 2.10
2529 6380 7.495934 CCTCCGTTCACAAATATAAGATGTTCT 59.504 37.037 0.00 0.00 0.00 3.01
2530 6381 7.254795 CCCTCCGTTCACAAATATAAGATGTTC 60.255 40.741 0.00 0.00 0.00 3.18
2531 6382 6.542370 CCCTCCGTTCACAAATATAAGATGTT 59.458 38.462 0.00 0.00 0.00 2.71
2532 6383 6.055588 CCCTCCGTTCACAAATATAAGATGT 58.944 40.000 0.00 0.00 0.00 3.06
2533 6384 6.288294 TCCCTCCGTTCACAAATATAAGATG 58.712 40.000 0.00 0.00 0.00 2.90
2534 6385 6.099845 ACTCCCTCCGTTCACAAATATAAGAT 59.900 38.462 0.00 0.00 0.00 2.40
2535 6386 5.424252 ACTCCCTCCGTTCACAAATATAAGA 59.576 40.000 0.00 0.00 0.00 2.10
2536 6387 5.671493 ACTCCCTCCGTTCACAAATATAAG 58.329 41.667 0.00 0.00 0.00 1.73
2537 6388 5.687166 ACTCCCTCCGTTCACAAATATAA 57.313 39.130 0.00 0.00 0.00 0.98
2538 6389 5.895534 ACTACTCCCTCCGTTCACAAATATA 59.104 40.000 0.00 0.00 0.00 0.86
2539 6390 4.715297 ACTACTCCCTCCGTTCACAAATAT 59.285 41.667 0.00 0.00 0.00 1.28
2540 6391 4.091549 ACTACTCCCTCCGTTCACAAATA 58.908 43.478 0.00 0.00 0.00 1.40
2541 6392 2.904434 ACTACTCCCTCCGTTCACAAAT 59.096 45.455 0.00 0.00 0.00 2.32
2542 6393 2.322658 ACTACTCCCTCCGTTCACAAA 58.677 47.619 0.00 0.00 0.00 2.83
2543 6394 2.005370 ACTACTCCCTCCGTTCACAA 57.995 50.000 0.00 0.00 0.00 3.33
2544 6395 2.005370 AACTACTCCCTCCGTTCACA 57.995 50.000 0.00 0.00 0.00 3.58
2545 6396 2.036862 ACAAACTACTCCCTCCGTTCAC 59.963 50.000 0.00 0.00 0.00 3.18
2546 6397 2.322658 ACAAACTACTCCCTCCGTTCA 58.677 47.619 0.00 0.00 0.00 3.18
2547 6398 3.675502 GCTACAAACTACTCCCTCCGTTC 60.676 52.174 0.00 0.00 0.00 3.95
2548 6399 2.233186 GCTACAAACTACTCCCTCCGTT 59.767 50.000 0.00 0.00 0.00 4.44
2549 6400 1.823610 GCTACAAACTACTCCCTCCGT 59.176 52.381 0.00 0.00 0.00 4.69
2550 6401 2.100989 AGCTACAAACTACTCCCTCCG 58.899 52.381 0.00 0.00 0.00 4.63
2551 6402 5.363005 TGAATAGCTACAAACTACTCCCTCC 59.637 44.000 0.00 0.00 0.00 4.30
2552 6403 6.097129 AGTGAATAGCTACAAACTACTCCCTC 59.903 42.308 0.00 0.00 0.00 4.30
2553 6404 5.958987 AGTGAATAGCTACAAACTACTCCCT 59.041 40.000 0.00 0.00 0.00 4.20
2554 6405 6.223351 AGTGAATAGCTACAAACTACTCCC 57.777 41.667 0.00 0.00 0.00 4.30
2555 6406 7.769220 TGTAGTGAATAGCTACAAACTACTCC 58.231 38.462 26.25 12.64 43.79 3.85
2564 6415 6.934645 GGCCATAATTGTAGTGAATAGCTACA 59.065 38.462 0.00 1.55 44.69 2.74
2565 6416 6.934645 TGGCCATAATTGTAGTGAATAGCTAC 59.065 38.462 0.00 0.00 39.26 3.58
2566 6417 6.934645 GTGGCCATAATTGTAGTGAATAGCTA 59.065 38.462 9.72 0.00 0.00 3.32
2567 6418 5.765182 GTGGCCATAATTGTAGTGAATAGCT 59.235 40.000 9.72 0.00 0.00 3.32
2568 6419 5.765182 AGTGGCCATAATTGTAGTGAATAGC 59.235 40.000 9.72 0.00 0.00 2.97
2569 6420 6.992123 TCAGTGGCCATAATTGTAGTGAATAG 59.008 38.462 9.72 0.00 0.00 1.73
2570 6421 6.894682 TCAGTGGCCATAATTGTAGTGAATA 58.105 36.000 9.72 0.00 0.00 1.75
2571 6422 5.754782 TCAGTGGCCATAATTGTAGTGAAT 58.245 37.500 9.72 0.00 0.00 2.57
2572 6423 5.172687 TCAGTGGCCATAATTGTAGTGAA 57.827 39.130 9.72 0.00 0.00 3.18
2573 6424 4.835284 TCAGTGGCCATAATTGTAGTGA 57.165 40.909 9.72 0.00 0.00 3.41
2574 6425 7.750229 ATTATCAGTGGCCATAATTGTAGTG 57.250 36.000 9.72 0.00 0.00 2.74
2575 6426 7.607991 GCTATTATCAGTGGCCATAATTGTAGT 59.392 37.037 9.72 0.00 0.00 2.73
2576 6427 7.607607 TGCTATTATCAGTGGCCATAATTGTAG 59.392 37.037 9.72 8.03 0.00 2.74
2577 6428 7.457561 TGCTATTATCAGTGGCCATAATTGTA 58.542 34.615 9.72 6.82 0.00 2.41
2578 6429 6.306199 TGCTATTATCAGTGGCCATAATTGT 58.694 36.000 9.72 0.00 0.00 2.71
2579 6430 6.822667 TGCTATTATCAGTGGCCATAATTG 57.177 37.500 9.72 11.00 0.00 2.32
2580 6431 9.532494 TTTATGCTATTATCAGTGGCCATAATT 57.468 29.630 9.72 0.00 0.00 1.40
2581 6432 9.532494 TTTTATGCTATTATCAGTGGCCATAAT 57.468 29.630 9.72 11.69 0.00 1.28
2582 6433 8.932434 TTTTATGCTATTATCAGTGGCCATAA 57.068 30.769 9.72 3.35 0.00 1.90
2583 6434 9.177608 GATTTTATGCTATTATCAGTGGCCATA 57.822 33.333 9.72 0.00 0.00 2.74
2584 6435 7.123247 GGATTTTATGCTATTATCAGTGGCCAT 59.877 37.037 9.72 0.00 0.00 4.40
2585 6436 6.434028 GGATTTTATGCTATTATCAGTGGCCA 59.566 38.462 0.00 0.00 0.00 5.36
2586 6437 6.434028 TGGATTTTATGCTATTATCAGTGGCC 59.566 38.462 0.00 0.00 0.00 5.36
2587 6438 7.391554 TCTGGATTTTATGCTATTATCAGTGGC 59.608 37.037 0.00 0.00 0.00 5.01
2588 6439 8.853077 TCTGGATTTTATGCTATTATCAGTGG 57.147 34.615 0.00 0.00 0.00 4.00
2592 6443 9.591792 CGAGATCTGGATTTTATGCTATTATCA 57.408 33.333 0.00 0.00 0.00 2.15
2593 6444 9.593134 ACGAGATCTGGATTTTATGCTATTATC 57.407 33.333 12.14 0.00 0.00 1.75
2594 6445 9.950496 AACGAGATCTGGATTTTATGCTATTAT 57.050 29.630 12.14 0.00 0.00 1.28
2595 6446 9.778741 AAACGAGATCTGGATTTTATGCTATTA 57.221 29.630 12.14 0.00 0.00 0.98
2596 6447 8.562892 CAAACGAGATCTGGATTTTATGCTATT 58.437 33.333 12.14 0.00 0.00 1.73
2597 6448 7.716998 ACAAACGAGATCTGGATTTTATGCTAT 59.283 33.333 12.14 0.00 0.00 2.97
2598 6449 7.047891 ACAAACGAGATCTGGATTTTATGCTA 58.952 34.615 12.14 0.00 0.00 3.49
2599 6450 5.882557 ACAAACGAGATCTGGATTTTATGCT 59.117 36.000 12.14 0.00 0.00 3.79
2600 6451 6.124088 ACAAACGAGATCTGGATTTTATGC 57.876 37.500 12.14 0.00 0.00 3.14
2601 6452 8.196802 TGTACAAACGAGATCTGGATTTTATG 57.803 34.615 12.14 0.00 0.00 1.90
2602 6453 8.786826 TTGTACAAACGAGATCTGGATTTTAT 57.213 30.769 12.14 0.00 0.00 1.40
2603 6454 8.500773 GTTTGTACAAACGAGATCTGGATTTTA 58.499 33.333 29.96 0.82 40.85 1.52
2604 6455 7.360361 GTTTGTACAAACGAGATCTGGATTTT 58.640 34.615 29.96 1.81 40.85 1.82
2605 6456 6.899114 GTTTGTACAAACGAGATCTGGATTT 58.101 36.000 29.96 5.74 40.85 2.17
2606 6457 6.481954 GTTTGTACAAACGAGATCTGGATT 57.518 37.500 29.96 2.86 40.85 3.01
2619 6470 5.654650 AGGAAATCACCACAGTTTGTACAAA 59.345 36.000 17.01 17.01 0.00 2.83
2620 6471 5.197451 AGGAAATCACCACAGTTTGTACAA 58.803 37.500 3.59 3.59 0.00 2.41
2621 6472 4.787551 AGGAAATCACCACAGTTTGTACA 58.212 39.130 0.00 0.00 0.00 2.90
2622 6473 5.519722 CAAGGAAATCACCACAGTTTGTAC 58.480 41.667 0.00 0.00 0.00 2.90
2623 6474 4.037446 GCAAGGAAATCACCACAGTTTGTA 59.963 41.667 0.00 0.00 0.00 2.41
2624 6475 3.181476 GCAAGGAAATCACCACAGTTTGT 60.181 43.478 0.00 0.00 0.00 2.83
2625 6476 3.068590 AGCAAGGAAATCACCACAGTTTG 59.931 43.478 0.00 0.00 0.00 2.93
2626 6477 3.299503 AGCAAGGAAATCACCACAGTTT 58.700 40.909 0.00 0.00 0.00 2.66
2627 6478 2.949447 AGCAAGGAAATCACCACAGTT 58.051 42.857 0.00 0.00 0.00 3.16
2628 6479 2.664402 AGCAAGGAAATCACCACAGT 57.336 45.000 0.00 0.00 0.00 3.55
2629 6480 3.679389 ACTAGCAAGGAAATCACCACAG 58.321 45.455 0.00 0.00 0.00 3.66
2630 6481 3.788227 ACTAGCAAGGAAATCACCACA 57.212 42.857 0.00 0.00 0.00 4.17
2631 6482 5.246307 AGTTACTAGCAAGGAAATCACCAC 58.754 41.667 0.00 0.00 0.00 4.16
2632 6483 5.499004 AGTTACTAGCAAGGAAATCACCA 57.501 39.130 0.00 0.00 0.00 4.17
2633 6484 6.092807 CAGAAGTTACTAGCAAGGAAATCACC 59.907 42.308 0.00 0.00 0.00 4.02
2634 6485 6.874134 TCAGAAGTTACTAGCAAGGAAATCAC 59.126 38.462 0.00 0.00 0.00 3.06
2635 6486 7.004555 TCAGAAGTTACTAGCAAGGAAATCA 57.995 36.000 0.00 0.00 0.00 2.57
2636 6487 7.550906 ACATCAGAAGTTACTAGCAAGGAAATC 59.449 37.037 0.00 0.00 0.00 2.17
2637 6488 7.335422 CACATCAGAAGTTACTAGCAAGGAAAT 59.665 37.037 0.00 0.00 0.00 2.17
2638 6489 6.650807 CACATCAGAAGTTACTAGCAAGGAAA 59.349 38.462 0.00 0.00 0.00 3.13
2639 6490 6.166279 CACATCAGAAGTTACTAGCAAGGAA 58.834 40.000 0.00 0.00 0.00 3.36
2640 6491 5.724328 CACATCAGAAGTTACTAGCAAGGA 58.276 41.667 0.00 0.00 0.00 3.36
2641 6492 4.331168 GCACATCAGAAGTTACTAGCAAGG 59.669 45.833 0.00 0.00 0.00 3.61
2642 6493 5.063186 CAGCACATCAGAAGTTACTAGCAAG 59.937 44.000 0.00 0.00 0.00 4.01
2643 6494 4.931601 CAGCACATCAGAAGTTACTAGCAA 59.068 41.667 0.00 0.00 0.00 3.91
2644 6495 4.220602 TCAGCACATCAGAAGTTACTAGCA 59.779 41.667 0.00 0.00 0.00 3.49
2645 6496 4.748892 TCAGCACATCAGAAGTTACTAGC 58.251 43.478 0.00 0.00 0.00 3.42
2646 6497 6.257411 CCAATCAGCACATCAGAAGTTACTAG 59.743 42.308 0.00 0.00 0.00 2.57
2647 6498 6.108687 CCAATCAGCACATCAGAAGTTACTA 58.891 40.000 0.00 0.00 0.00 1.82
2648 6499 4.940046 CCAATCAGCACATCAGAAGTTACT 59.060 41.667 0.00 0.00 0.00 2.24
2649 6500 4.697352 ACCAATCAGCACATCAGAAGTTAC 59.303 41.667 0.00 0.00 0.00 2.50
2650 6501 4.910195 ACCAATCAGCACATCAGAAGTTA 58.090 39.130 0.00 0.00 0.00 2.24
2651 6502 3.759581 ACCAATCAGCACATCAGAAGTT 58.240 40.909 0.00 0.00 0.00 2.66
2652 6503 3.430042 ACCAATCAGCACATCAGAAGT 57.570 42.857 0.00 0.00 0.00 3.01
2653 6504 6.263344 CAAATACCAATCAGCACATCAGAAG 58.737 40.000 0.00 0.00 0.00 2.85
2654 6505 5.393352 GCAAATACCAATCAGCACATCAGAA 60.393 40.000 0.00 0.00 0.00 3.02
2655 6506 4.096833 GCAAATACCAATCAGCACATCAGA 59.903 41.667 0.00 0.00 0.00 3.27
2656 6507 4.097437 AGCAAATACCAATCAGCACATCAG 59.903 41.667 0.00 0.00 0.00 2.90
2657 6508 4.018490 AGCAAATACCAATCAGCACATCA 58.982 39.130 0.00 0.00 0.00 3.07
2658 6509 4.142315 ACAGCAAATACCAATCAGCACATC 60.142 41.667 0.00 0.00 0.00 3.06
2659 6510 3.765511 ACAGCAAATACCAATCAGCACAT 59.234 39.130 0.00 0.00 0.00 3.21
2660 6511 3.156293 ACAGCAAATACCAATCAGCACA 58.844 40.909 0.00 0.00 0.00 4.57
2661 6512 3.441572 AGACAGCAAATACCAATCAGCAC 59.558 43.478 0.00 0.00 0.00 4.40
2662 6513 3.689347 AGACAGCAAATACCAATCAGCA 58.311 40.909 0.00 0.00 0.00 4.41
2663 6514 5.220931 CCTTAGACAGCAAATACCAATCAGC 60.221 44.000 0.00 0.00 0.00 4.26
2664 6515 5.882557 ACCTTAGACAGCAAATACCAATCAG 59.117 40.000 0.00 0.00 0.00 2.90
2665 6516 5.647658 CACCTTAGACAGCAAATACCAATCA 59.352 40.000 0.00 0.00 0.00 2.57
2666 6517 5.880332 TCACCTTAGACAGCAAATACCAATC 59.120 40.000 0.00 0.00 0.00 2.67
2667 6518 5.815581 TCACCTTAGACAGCAAATACCAAT 58.184 37.500 0.00 0.00 0.00 3.16
2668 6519 5.235850 TCACCTTAGACAGCAAATACCAA 57.764 39.130 0.00 0.00 0.00 3.67
2669 6520 4.901197 TCACCTTAGACAGCAAATACCA 57.099 40.909 0.00 0.00 0.00 3.25
2670 6521 6.759497 ATTTCACCTTAGACAGCAAATACC 57.241 37.500 0.00 0.00 0.00 2.73
2671 6522 9.129209 GAAAATTTCACCTTAGACAGCAAATAC 57.871 33.333 0.11 0.00 0.00 1.89
2672 6523 9.077885 AGAAAATTTCACCTTAGACAGCAAATA 57.922 29.630 8.55 0.00 0.00 1.40
2673 6524 7.955918 AGAAAATTTCACCTTAGACAGCAAAT 58.044 30.769 8.55 0.00 0.00 2.32
2674 6525 7.346751 AGAAAATTTCACCTTAGACAGCAAA 57.653 32.000 8.55 0.00 0.00 3.68
2675 6526 6.959639 AGAAAATTTCACCTTAGACAGCAA 57.040 33.333 8.55 0.00 0.00 3.91
2676 6527 9.905713 ATATAGAAAATTTCACCTTAGACAGCA 57.094 29.630 8.55 0.00 0.00 4.41
2699 6550 9.520515 ACTTCCAGAATTGTACTGTCAAAATAT 57.479 29.630 0.00 0.00 34.04 1.28
2700 6551 8.783093 CACTTCCAGAATTGTACTGTCAAAATA 58.217 33.333 0.00 0.00 34.04 1.40
2701 6552 7.255590 CCACTTCCAGAATTGTACTGTCAAAAT 60.256 37.037 0.00 0.00 34.04 1.82
2702 6553 6.039270 CCACTTCCAGAATTGTACTGTCAAAA 59.961 38.462 0.00 0.00 34.04 2.44
2703 6554 5.530915 CCACTTCCAGAATTGTACTGTCAAA 59.469 40.000 0.00 0.00 34.04 2.69
2704 6555 5.063204 CCACTTCCAGAATTGTACTGTCAA 58.937 41.667 0.00 0.00 34.04 3.18
2705 6556 4.346709 TCCACTTCCAGAATTGTACTGTCA 59.653 41.667 0.00 0.00 34.04 3.58
2706 6557 4.894784 TCCACTTCCAGAATTGTACTGTC 58.105 43.478 0.00 0.00 34.04 3.51
2707 6558 4.593206 TCTCCACTTCCAGAATTGTACTGT 59.407 41.667 0.00 0.00 34.04 3.55
2708 6559 5.152623 TCTCCACTTCCAGAATTGTACTG 57.847 43.478 0.00 0.00 35.43 2.74
2709 6560 5.825593 TTCTCCACTTCCAGAATTGTACT 57.174 39.130 0.00 0.00 0.00 2.73
2710 6561 7.454260 AATTTCTCCACTTCCAGAATTGTAC 57.546 36.000 0.00 0.00 0.00 2.90
2711 6562 7.039784 CCAAATTTCTCCACTTCCAGAATTGTA 60.040 37.037 0.00 0.00 0.00 2.41
2712 6563 6.239402 CCAAATTTCTCCACTTCCAGAATTGT 60.239 38.462 0.00 0.00 0.00 2.71
2713 6564 6.161381 CCAAATTTCTCCACTTCCAGAATTG 58.839 40.000 0.00 0.00 0.00 2.32
2714 6565 5.246883 CCCAAATTTCTCCACTTCCAGAATT 59.753 40.000 0.00 0.00 0.00 2.17
2715 6566 4.774200 CCCAAATTTCTCCACTTCCAGAAT 59.226 41.667 0.00 0.00 0.00 2.40
2716 6567 4.141041 TCCCAAATTTCTCCACTTCCAGAA 60.141 41.667 0.00 0.00 0.00 3.02
2717 6568 3.397618 TCCCAAATTTCTCCACTTCCAGA 59.602 43.478 0.00 0.00 0.00 3.86
2718 6569 3.766545 TCCCAAATTTCTCCACTTCCAG 58.233 45.455 0.00 0.00 0.00 3.86
2719 6570 3.893753 TCCCAAATTTCTCCACTTCCA 57.106 42.857 0.00 0.00 0.00 3.53
2720 6571 5.745312 AAATCCCAAATTTCTCCACTTCC 57.255 39.130 0.00 0.00 0.00 3.46
2742 6593 7.491682 ACTTAATTGAGAAAGCAGCTGAAAAA 58.508 30.769 20.43 1.37 0.00 1.94
2743 6594 7.013655 AGACTTAATTGAGAAAGCAGCTGAAAA 59.986 33.333 20.43 0.25 0.00 2.29
2744 6595 6.488006 AGACTTAATTGAGAAAGCAGCTGAAA 59.512 34.615 20.43 0.00 0.00 2.69
2745 6596 6.000219 AGACTTAATTGAGAAAGCAGCTGAA 59.000 36.000 20.43 0.19 0.00 3.02
2746 6597 5.555017 AGACTTAATTGAGAAAGCAGCTGA 58.445 37.500 20.43 0.00 0.00 4.26
2747 6598 5.410746 TGAGACTTAATTGAGAAAGCAGCTG 59.589 40.000 10.11 10.11 0.00 4.24
2748 6599 5.411053 GTGAGACTTAATTGAGAAAGCAGCT 59.589 40.000 3.94 0.00 0.00 4.24
2749 6600 5.180117 TGTGAGACTTAATTGAGAAAGCAGC 59.820 40.000 3.94 0.00 0.00 5.25
2750 6601 6.426328 AGTGTGAGACTTAATTGAGAAAGCAG 59.574 38.462 3.94 0.00 0.00 4.24
2751 6602 6.203530 CAGTGTGAGACTTAATTGAGAAAGCA 59.796 38.462 3.94 0.00 29.75 3.91
2752 6603 6.597614 CAGTGTGAGACTTAATTGAGAAAGC 58.402 40.000 3.94 0.00 29.75 3.51
2753 6604 6.426328 AGCAGTGTGAGACTTAATTGAGAAAG 59.574 38.462 3.94 0.00 29.75 2.62
2754 6605 6.291377 AGCAGTGTGAGACTTAATTGAGAAA 58.709 36.000 3.94 0.00 29.75 2.52
2755 6606 5.858381 AGCAGTGTGAGACTTAATTGAGAA 58.142 37.500 3.94 0.00 29.75 2.87
2756 6607 5.474578 AGCAGTGTGAGACTTAATTGAGA 57.525 39.130 3.94 0.00 29.75 3.27
2757 6608 5.616424 GCAAGCAGTGTGAGACTTAATTGAG 60.616 44.000 0.00 0.00 29.75 3.02
2758 6609 4.214119 GCAAGCAGTGTGAGACTTAATTGA 59.786 41.667 3.49 0.00 29.75 2.57
2759 6610 4.214971 AGCAAGCAGTGTGAGACTTAATTG 59.785 41.667 0.00 0.00 29.75 2.32
2760 6611 4.214971 CAGCAAGCAGTGTGAGACTTAATT 59.785 41.667 0.00 0.00 29.75 1.40
2761 6612 3.750130 CAGCAAGCAGTGTGAGACTTAAT 59.250 43.478 0.00 0.00 29.75 1.40
2762 6613 3.133691 CAGCAAGCAGTGTGAGACTTAA 58.866 45.455 0.00 0.00 29.75 1.85
2763 6614 2.759191 CAGCAAGCAGTGTGAGACTTA 58.241 47.619 0.00 0.00 29.75 2.24
2764 6615 1.590932 CAGCAAGCAGTGTGAGACTT 58.409 50.000 0.00 0.00 29.75 3.01
2765 6616 0.883814 GCAGCAAGCAGTGTGAGACT 60.884 55.000 0.00 0.00 44.79 3.24
2766 6617 1.573436 GCAGCAAGCAGTGTGAGAC 59.427 57.895 0.00 0.00 44.79 3.36
2767 6618 4.054085 GCAGCAAGCAGTGTGAGA 57.946 55.556 0.00 0.00 44.79 3.27
2776 6627 6.200854 ACTTAAGTACAAAAATTGCAGCAAGC 59.799 34.615 14.47 0.00 45.96 4.01
2777 6628 7.698836 ACTTAAGTACAAAAATTGCAGCAAG 57.301 32.000 14.47 1.73 0.00 4.01
2778 6629 7.761704 TGAACTTAAGTACAAAAATTGCAGCAA 59.238 29.630 11.07 11.07 0.00 3.91
2779 6630 7.261325 TGAACTTAAGTACAAAAATTGCAGCA 58.739 30.769 8.92 0.00 0.00 4.41
2780 6631 7.692908 TGAACTTAAGTACAAAAATTGCAGC 57.307 32.000 8.92 0.00 0.00 5.25
2782 6633 8.547069 GCATTGAACTTAAGTACAAAAATTGCA 58.453 29.630 8.92 0.00 30.28 4.08
2783 6634 8.547069 TGCATTGAACTTAAGTACAAAAATTGC 58.453 29.630 8.92 10.57 0.00 3.56
2787 6638 9.646427 ACTTTGCATTGAACTTAAGTACAAAAA 57.354 25.926 8.92 3.62 0.00 1.94
2800 6651 9.983804 GGTTAGTTACTATACTTTGCATTGAAC 57.016 33.333 0.00 0.00 0.00 3.18
2801 6652 9.727859 TGGTTAGTTACTATACTTTGCATTGAA 57.272 29.630 0.00 0.00 0.00 2.69
2802 6653 9.727859 TTGGTTAGTTACTATACTTTGCATTGA 57.272 29.630 0.00 0.00 0.00 2.57
2803 6654 9.988350 CTTGGTTAGTTACTATACTTTGCATTG 57.012 33.333 0.00 0.00 0.00 2.82
2804 6655 9.734984 ACTTGGTTAGTTACTATACTTTGCATT 57.265 29.630 0.00 0.00 31.29 3.56
2805 6656 9.734984 AACTTGGTTAGTTACTATACTTTGCAT 57.265 29.630 0.00 0.00 45.22 3.96
2806 6657 9.211485 GAACTTGGTTAGTTACTATACTTTGCA 57.789 33.333 0.00 0.00 47.00 4.08
2807 6658 9.211485 TGAACTTGGTTAGTTACTATACTTTGC 57.789 33.333 0.00 0.00 47.00 3.68
2815 6666 9.228949 TGTTGTTTTGAACTTGGTTAGTTACTA 57.771 29.630 0.00 0.00 47.00 1.82
2816 6667 8.113173 TGTTGTTTTGAACTTGGTTAGTTACT 57.887 30.769 0.00 0.00 47.00 2.24
2817 6668 8.745464 TTGTTGTTTTGAACTTGGTTAGTTAC 57.255 30.769 0.00 0.00 47.00 2.50
2818 6669 8.030106 CCTTGTTGTTTTGAACTTGGTTAGTTA 58.970 33.333 0.00 0.00 47.00 2.24
2820 6671 6.014925 ACCTTGTTGTTTTGAACTTGGTTAGT 60.015 34.615 0.00 0.00 39.32 2.24
2821 6672 6.394809 ACCTTGTTGTTTTGAACTTGGTTAG 58.605 36.000 0.00 0.00 32.26 2.34
2822 6673 6.347859 ACCTTGTTGTTTTGAACTTGGTTA 57.652 33.333 0.00 0.00 32.26 2.85
2823 6674 5.222079 ACCTTGTTGTTTTGAACTTGGTT 57.778 34.783 0.00 0.00 32.26 3.67
2824 6675 4.882842 ACCTTGTTGTTTTGAACTTGGT 57.117 36.364 0.00 0.00 31.75 3.67
2825 6676 4.326009 CGAACCTTGTTGTTTTGAACTTGG 59.674 41.667 0.00 0.00 0.00 3.61
2826 6677 4.201580 GCGAACCTTGTTGTTTTGAACTTG 60.202 41.667 0.00 0.00 0.00 3.16
2827 6678 3.924073 GCGAACCTTGTTGTTTTGAACTT 59.076 39.130 0.00 0.00 0.00 2.66
2828 6679 3.057174 TGCGAACCTTGTTGTTTTGAACT 60.057 39.130 0.00 0.00 0.00 3.01
2829 6680 3.246619 TGCGAACCTTGTTGTTTTGAAC 58.753 40.909 0.00 0.00 0.00 3.18
2830 6681 3.577649 TGCGAACCTTGTTGTTTTGAA 57.422 38.095 0.00 0.00 0.00 2.69
2831 6682 3.490078 GGATGCGAACCTTGTTGTTTTGA 60.490 43.478 0.00 0.00 0.00 2.69
2832 6683 2.794350 GGATGCGAACCTTGTTGTTTTG 59.206 45.455 0.00 0.00 0.00 2.44
2833 6684 2.693074 AGGATGCGAACCTTGTTGTTTT 59.307 40.909 0.00 0.00 33.55 2.43
2834 6685 2.306847 AGGATGCGAACCTTGTTGTTT 58.693 42.857 0.00 0.00 33.55 2.83
2835 6686 1.981256 AGGATGCGAACCTTGTTGTT 58.019 45.000 0.00 0.00 33.55 2.83
2836 6687 1.981256 AAGGATGCGAACCTTGTTGT 58.019 45.000 7.84 0.00 44.73 3.32
2837 6688 3.369546 AAAAGGATGCGAACCTTGTTG 57.630 42.857 9.11 0.00 45.55 3.33
2838 6689 5.523438 TTAAAAAGGATGCGAACCTTGTT 57.477 34.783 13.59 13.59 45.55 2.83
2839 6690 4.558697 GCTTAAAAAGGATGCGAACCTTGT 60.559 41.667 9.11 2.21 45.55 3.16
2840 6691 3.920412 GCTTAAAAAGGATGCGAACCTTG 59.080 43.478 9.11 0.00 45.55 3.61
2842 6693 3.421844 AGCTTAAAAAGGATGCGAACCT 58.578 40.909 0.00 0.00 39.69 3.50
2843 6694 3.190535 TGAGCTTAAAAAGGATGCGAACC 59.809 43.478 0.00 0.00 0.00 3.62
2844 6695 4.419522 TGAGCTTAAAAAGGATGCGAAC 57.580 40.909 0.00 0.00 0.00 3.95
2845 6696 4.142403 CCATGAGCTTAAAAAGGATGCGAA 60.142 41.667 0.00 0.00 0.00 4.70
2846 6697 3.378112 CCATGAGCTTAAAAAGGATGCGA 59.622 43.478 0.00 0.00 0.00 5.10
2847 6698 3.489738 CCCATGAGCTTAAAAAGGATGCG 60.490 47.826 0.00 0.00 0.00 4.73
2848 6699 3.701040 TCCCATGAGCTTAAAAAGGATGC 59.299 43.478 0.00 0.00 0.00 3.91
2849 6700 5.920193 TTCCCATGAGCTTAAAAAGGATG 57.080 39.130 0.00 0.00 0.00 3.51
2850 6701 6.933514 TTTTCCCATGAGCTTAAAAAGGAT 57.066 33.333 0.00 0.00 0.00 3.24
2851 6702 6.739331 TTTTTCCCATGAGCTTAAAAAGGA 57.261 33.333 0.00 0.00 0.00 3.36
2875 6726 9.683069 CTTTTAGACAGTTAAATGAATGCTGTT 57.317 29.630 10.35 0.00 40.06 3.16
2876 6727 8.299570 CCTTTTAGACAGTTAAATGAATGCTGT 58.700 33.333 10.35 0.93 42.29 4.40
2877 6728 8.299570 ACCTTTTAGACAGTTAAATGAATGCTG 58.700 33.333 10.35 0.00 0.00 4.41
2878 6729 8.409358 ACCTTTTAGACAGTTAAATGAATGCT 57.591 30.769 10.35 4.13 0.00 3.79
2888 6739 9.841295 ACTTCAATGTAACCTTTTAGACAGTTA 57.159 29.630 0.00 0.00 0.00 2.24
2889 6740 8.747538 ACTTCAATGTAACCTTTTAGACAGTT 57.252 30.769 0.00 0.00 0.00 3.16
2890 6741 8.747538 AACTTCAATGTAACCTTTTAGACAGT 57.252 30.769 0.00 0.00 0.00 3.55
2891 6742 8.836413 TGAACTTCAATGTAACCTTTTAGACAG 58.164 33.333 0.00 0.00 0.00 3.51
2892 6743 8.740123 TGAACTTCAATGTAACCTTTTAGACA 57.260 30.769 0.00 0.00 0.00 3.41
2893 6744 9.612620 CATGAACTTCAATGTAACCTTTTAGAC 57.387 33.333 0.00 0.00 0.00 2.59
2894 6745 9.349713 ACATGAACTTCAATGTAACCTTTTAGA 57.650 29.630 0.00 0.00 0.00 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.