Multiple sequence alignment - TraesCS5B01G214800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G214800 chr5B 100.000 2264 0 0 1 2264 387878132 387880395 0.000000e+00 4181
1 TraesCS5B01G214800 chr2B 94.347 1645 79 7 302 1933 430232161 430230518 0.000000e+00 2510
2 TraesCS5B01G214800 chr2B 93.670 1643 92 7 300 1933 215847468 215849107 0.000000e+00 2447
3 TraesCS5B01G214800 chr6D 89.893 1969 157 25 300 2247 377212504 377214451 0.000000e+00 2495
4 TraesCS5B01G214800 chrUn 92.905 1649 92 15 300 1932 10399472 10401111 0.000000e+00 2374
5 TraesCS5B01G214800 chr3D 92.753 1642 98 10 300 1932 310406393 310408022 0.000000e+00 2353
6 TraesCS5B01G214800 chr3D 91.793 1645 112 16 300 1932 446922723 446924356 0.000000e+00 2268
7 TraesCS5B01G214800 chr3D 96.382 304 10 1 1 303 535813836 535813533 1.210000e-137 499
8 TraesCS5B01G214800 chr3D 96.346 301 10 1 1 300 93228799 93229099 5.620000e-136 494
9 TraesCS5B01G214800 chr1D 92.731 1637 107 8 300 1932 446419606 446421234 0.000000e+00 2353
10 TraesCS5B01G214800 chr1D 79.480 346 61 6 1906 2246 14672928 14672588 1.050000e-58 237
11 TraesCS5B01G214800 chr4D 92.005 1651 106 17 300 1932 470196339 470194697 0.000000e+00 2294
12 TraesCS5B01G214800 chr4D 96.346 301 10 1 1 300 204895033 204894733 5.620000e-136 494
13 TraesCS5B01G214800 chr4D 95.752 306 10 3 4 307 472459875 472459571 7.270000e-135 490
14 TraesCS5B01G214800 chr4D 84.502 271 32 7 1984 2246 495818709 495818441 2.230000e-65 259
15 TraesCS5B01G214800 chr2D 92.000 1650 108 16 300 1933 619853930 619855571 0.000000e+00 2294
16 TraesCS5B01G214800 chr2D 93.896 1245 41 10 708 1932 632766843 632768072 0.000000e+00 1845
17 TraesCS5B01G214800 chr7D 90.068 1168 51 13 745 1891 460800557 460801680 0.000000e+00 1454
18 TraesCS5B01G214800 chr7D 96.678 301 9 1 1 300 36818064 36817764 1.210000e-137 499
19 TraesCS5B01G214800 chr7D 96.066 305 11 1 1 304 273926492 273926188 1.560000e-136 496
20 TraesCS5B01G214800 chr7D 80.716 363 64 4 1904 2260 610728507 610728145 6.160000e-71 278
21 TraesCS5B01G214800 chr7D 83.942 274 36 7 1984 2254 131691681 131691413 2.890000e-64 255
22 TraesCS5B01G214800 chr4A 96.370 303 10 1 1 302 352615326 352615024 4.340000e-137 497
23 TraesCS5B01G214800 chr4A 83.836 365 45 8 1904 2264 564699127 564699481 3.600000e-88 335
24 TraesCS5B01G214800 chr5D 96.346 301 10 1 1 300 206776546 206776846 5.620000e-136 494
25 TraesCS5B01G214800 chr4B 96.346 301 10 1 1 300 131718278 131717978 5.620000e-136 494
26 TraesCS5B01G214800 chr4B 85.479 365 45 7 1904 2264 467348094 467347734 7.640000e-100 374
27 TraesCS5B01G214800 chr3B 85.205 365 48 4 1904 2264 103210715 103211077 9.880000e-99 370
28 TraesCS5B01G214800 chr3B 83.883 273 36 7 1977 2245 103211064 103210796 1.040000e-63 254
29 TraesCS5B01G214800 chr6A 78.674 347 64 6 1904 2245 466146403 466146744 2.930000e-54 222


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G214800 chr5B 387878132 387880395 2263 False 4181 4181 100.000 1 2264 1 chr5B.!!$F1 2263
1 TraesCS5B01G214800 chr2B 430230518 430232161 1643 True 2510 2510 94.347 302 1933 1 chr2B.!!$R1 1631
2 TraesCS5B01G214800 chr2B 215847468 215849107 1639 False 2447 2447 93.670 300 1933 1 chr2B.!!$F1 1633
3 TraesCS5B01G214800 chr6D 377212504 377214451 1947 False 2495 2495 89.893 300 2247 1 chr6D.!!$F1 1947
4 TraesCS5B01G214800 chrUn 10399472 10401111 1639 False 2374 2374 92.905 300 1932 1 chrUn.!!$F1 1632
5 TraesCS5B01G214800 chr3D 310406393 310408022 1629 False 2353 2353 92.753 300 1932 1 chr3D.!!$F2 1632
6 TraesCS5B01G214800 chr3D 446922723 446924356 1633 False 2268 2268 91.793 300 1932 1 chr3D.!!$F3 1632
7 TraesCS5B01G214800 chr1D 446419606 446421234 1628 False 2353 2353 92.731 300 1932 1 chr1D.!!$F1 1632
8 TraesCS5B01G214800 chr4D 470194697 470196339 1642 True 2294 2294 92.005 300 1932 1 chr4D.!!$R2 1632
9 TraesCS5B01G214800 chr2D 619853930 619855571 1641 False 2294 2294 92.000 300 1933 1 chr2D.!!$F1 1633
10 TraesCS5B01G214800 chr2D 632766843 632768072 1229 False 1845 1845 93.896 708 1932 1 chr2D.!!$F2 1224
11 TraesCS5B01G214800 chr7D 460800557 460801680 1123 False 1454 1454 90.068 745 1891 1 chr7D.!!$F1 1146


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
44 45 0.035725 TCGAAGCTCCCTGACGTCTA 60.036 55.0 17.92 2.26 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1981 2079 0.400093 AGGCTATGGTGGTAGGGTCC 60.4 60.0 0.0 0.0 0.0 4.46 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.691342 CCTCGTGGCCACCTCGAA 61.691 66.667 29.95 9.58 46.34 3.71
30 31 2.125912 CTCGTGGCCACCTCGAAG 60.126 66.667 29.95 14.84 46.34 3.79
31 32 4.373116 TCGTGGCCACCTCGAAGC 62.373 66.667 29.95 2.63 44.63 3.86
32 33 4.379243 CGTGGCCACCTCGAAGCT 62.379 66.667 29.95 0.00 42.19 3.74
33 34 2.435059 GTGGCCACCTCGAAGCTC 60.435 66.667 26.31 0.00 0.00 4.09
34 35 3.706373 TGGCCACCTCGAAGCTCC 61.706 66.667 0.00 0.00 0.00 4.70
35 36 4.475135 GGCCACCTCGAAGCTCCC 62.475 72.222 0.00 0.00 0.00 4.30
36 37 3.394836 GCCACCTCGAAGCTCCCT 61.395 66.667 0.00 0.00 0.00 4.20
37 38 2.581354 CCACCTCGAAGCTCCCTG 59.419 66.667 0.00 0.00 0.00 4.45
38 39 1.984570 CCACCTCGAAGCTCCCTGA 60.985 63.158 0.00 0.00 0.00 3.86
39 40 1.216710 CACCTCGAAGCTCCCTGAC 59.783 63.158 0.00 0.00 0.00 3.51
40 41 2.344203 ACCTCGAAGCTCCCTGACG 61.344 63.158 0.00 0.00 0.00 4.35
41 42 2.344203 CCTCGAAGCTCCCTGACGT 61.344 63.158 0.00 0.00 0.00 4.34
42 43 1.137825 CTCGAAGCTCCCTGACGTC 59.862 63.158 9.11 9.11 0.00 4.34
43 44 1.303398 TCGAAGCTCCCTGACGTCT 60.303 57.895 17.92 0.00 0.00 4.18
44 45 0.035725 TCGAAGCTCCCTGACGTCTA 60.036 55.000 17.92 2.26 0.00 2.59
45 46 0.099082 CGAAGCTCCCTGACGTCTAC 59.901 60.000 17.92 0.00 0.00 2.59
46 47 1.465794 GAAGCTCCCTGACGTCTACT 58.534 55.000 17.92 2.17 0.00 2.57
47 48 1.402613 GAAGCTCCCTGACGTCTACTC 59.597 57.143 17.92 1.35 0.00 2.59
48 49 0.621609 AGCTCCCTGACGTCTACTCT 59.378 55.000 17.92 3.68 0.00 3.24
49 50 1.838715 AGCTCCCTGACGTCTACTCTA 59.161 52.381 17.92 0.00 0.00 2.43
50 51 2.239150 AGCTCCCTGACGTCTACTCTAA 59.761 50.000 17.92 0.00 0.00 2.10
51 52 2.614983 GCTCCCTGACGTCTACTCTAAG 59.385 54.545 17.92 3.40 0.00 2.18
52 53 3.876341 CTCCCTGACGTCTACTCTAAGT 58.124 50.000 17.92 0.00 0.00 2.24
53 54 3.871485 TCCCTGACGTCTACTCTAAGTC 58.129 50.000 17.92 0.00 0.00 3.01
54 55 3.518705 TCCCTGACGTCTACTCTAAGTCT 59.481 47.826 17.92 0.00 33.40 3.24
55 56 3.872771 CCCTGACGTCTACTCTAAGTCTC 59.127 52.174 17.92 0.00 33.40 3.36
56 57 3.872771 CCTGACGTCTACTCTAAGTCTCC 59.127 52.174 17.92 0.00 33.40 3.71
57 58 4.383335 CCTGACGTCTACTCTAAGTCTCCT 60.383 50.000 17.92 0.00 33.40 3.69
58 59 4.505808 TGACGTCTACTCTAAGTCTCCTG 58.494 47.826 17.92 0.00 33.40 3.86
59 60 3.872771 GACGTCTACTCTAAGTCTCCTGG 59.127 52.174 8.70 0.00 0.00 4.45
60 61 3.518705 ACGTCTACTCTAAGTCTCCTGGA 59.481 47.826 0.00 0.00 0.00 3.86
61 62 4.164604 ACGTCTACTCTAAGTCTCCTGGAT 59.835 45.833 0.00 0.00 0.00 3.41
62 63 5.127491 CGTCTACTCTAAGTCTCCTGGATT 58.873 45.833 0.00 0.00 0.00 3.01
63 64 5.008217 CGTCTACTCTAAGTCTCCTGGATTG 59.992 48.000 0.00 0.00 0.00 2.67
64 65 4.890581 TCTACTCTAAGTCTCCTGGATTGC 59.109 45.833 0.00 0.00 0.00 3.56
65 66 3.718723 ACTCTAAGTCTCCTGGATTGCT 58.281 45.455 0.00 0.00 0.00 3.91
66 67 4.100373 ACTCTAAGTCTCCTGGATTGCTT 58.900 43.478 0.00 4.95 0.00 3.91
67 68 4.161377 ACTCTAAGTCTCCTGGATTGCTTC 59.839 45.833 0.00 0.00 0.00 3.86
68 69 2.797177 AAGTCTCCTGGATTGCTTCC 57.203 50.000 0.00 0.00 45.69 3.46
78 79 3.378911 GGATTGCTTCCGTTCCAAAAA 57.621 42.857 0.00 0.00 33.93 1.94
79 80 3.925379 GGATTGCTTCCGTTCCAAAAAT 58.075 40.909 0.00 0.00 33.93 1.82
80 81 5.066968 GGATTGCTTCCGTTCCAAAAATA 57.933 39.130 0.00 0.00 33.93 1.40
81 82 5.474825 GGATTGCTTCCGTTCCAAAAATAA 58.525 37.500 0.00 0.00 33.93 1.40
82 83 5.347635 GGATTGCTTCCGTTCCAAAAATAAC 59.652 40.000 0.00 0.00 33.93 1.89
83 84 5.523438 TTGCTTCCGTTCCAAAAATAACT 57.477 34.783 0.00 0.00 0.00 2.24
84 85 5.116069 TGCTTCCGTTCCAAAAATAACTC 57.884 39.130 0.00 0.00 0.00 3.01
85 86 4.825085 TGCTTCCGTTCCAAAAATAACTCT 59.175 37.500 0.00 0.00 0.00 3.24
86 87 5.048991 TGCTTCCGTTCCAAAAATAACTCTC 60.049 40.000 0.00 0.00 0.00 3.20
87 88 5.181433 GCTTCCGTTCCAAAAATAACTCTCT 59.819 40.000 0.00 0.00 0.00 3.10
88 89 6.620949 GCTTCCGTTCCAAAAATAACTCTCTC 60.621 42.308 0.00 0.00 0.00 3.20
89 90 4.927425 TCCGTTCCAAAAATAACTCTCTCG 59.073 41.667 0.00 0.00 0.00 4.04
90 91 4.927425 CCGTTCCAAAAATAACTCTCTCGA 59.073 41.667 0.00 0.00 0.00 4.04
91 92 5.407387 CCGTTCCAAAAATAACTCTCTCGAA 59.593 40.000 0.00 0.00 0.00 3.71
92 93 6.401153 CCGTTCCAAAAATAACTCTCTCGAAG 60.401 42.308 0.00 0.00 0.00 3.79
93 94 6.401153 CGTTCCAAAAATAACTCTCTCGAAGG 60.401 42.308 0.00 0.00 0.00 3.46
94 95 6.110411 TCCAAAAATAACTCTCTCGAAGGT 57.890 37.500 0.00 0.00 0.00 3.50
95 96 6.531021 TCCAAAAATAACTCTCTCGAAGGTT 58.469 36.000 0.00 0.00 0.00 3.50
96 97 6.996282 TCCAAAAATAACTCTCTCGAAGGTTT 59.004 34.615 0.00 0.00 0.00 3.27
97 98 7.172703 TCCAAAAATAACTCTCTCGAAGGTTTC 59.827 37.037 0.00 0.00 0.00 2.78
98 99 7.041372 CCAAAAATAACTCTCTCGAAGGTTTCA 60.041 37.037 0.00 0.00 0.00 2.69
99 100 8.507249 CAAAAATAACTCTCTCGAAGGTTTCAT 58.493 33.333 0.00 0.00 0.00 2.57
100 101 8.622948 AAAATAACTCTCTCGAAGGTTTCATT 57.377 30.769 0.00 0.00 0.00 2.57
101 102 7.835634 AATAACTCTCTCGAAGGTTTCATTC 57.164 36.000 0.00 0.00 0.00 2.67
102 103 4.195225 ACTCTCTCGAAGGTTTCATTCC 57.805 45.455 0.00 0.00 0.00 3.01
103 104 3.182967 CTCTCTCGAAGGTTTCATTCCG 58.817 50.000 0.00 0.00 0.00 4.30
104 105 2.561419 TCTCTCGAAGGTTTCATTCCGT 59.439 45.455 0.00 0.00 0.00 4.69
105 106 3.006537 TCTCTCGAAGGTTTCATTCCGTT 59.993 43.478 0.00 0.00 0.00 4.44
106 107 3.735591 TCTCGAAGGTTTCATTCCGTTT 58.264 40.909 0.00 0.00 0.00 3.60
107 108 3.496884 TCTCGAAGGTTTCATTCCGTTTG 59.503 43.478 0.00 0.00 0.00 2.93
108 109 2.550606 TCGAAGGTTTCATTCCGTTTGG 59.449 45.455 0.00 0.00 0.00 3.28
109 110 2.550606 CGAAGGTTTCATTCCGTTTGGA 59.449 45.455 0.00 0.00 44.61 3.53
110 111 3.608474 CGAAGGTTTCATTCCGTTTGGAC 60.608 47.826 0.00 0.00 46.45 4.02
111 112 3.223674 AGGTTTCATTCCGTTTGGACT 57.776 42.857 0.00 0.00 46.45 3.85
112 113 3.146847 AGGTTTCATTCCGTTTGGACTC 58.853 45.455 0.00 0.00 46.45 3.36
113 114 2.228103 GGTTTCATTCCGTTTGGACTCC 59.772 50.000 0.00 0.00 46.45 3.85
114 115 1.803334 TTCATTCCGTTTGGACTCCG 58.197 50.000 0.00 0.00 46.45 4.63
115 116 0.682852 TCATTCCGTTTGGACTCCGT 59.317 50.000 0.00 0.00 46.45 4.69
116 117 1.071071 TCATTCCGTTTGGACTCCGTT 59.929 47.619 0.00 0.00 46.45 4.44
117 118 1.877443 CATTCCGTTTGGACTCCGTTT 59.123 47.619 0.00 0.00 46.45 3.60
118 119 1.301423 TTCCGTTTGGACTCCGTTTG 58.699 50.000 0.00 0.00 46.45 2.93
119 120 0.464870 TCCGTTTGGACTCCGTTTGA 59.535 50.000 0.00 0.00 40.17 2.69
120 121 1.071071 TCCGTTTGGACTCCGTTTGAT 59.929 47.619 0.00 0.00 40.17 2.57
121 122 2.299582 TCCGTTTGGACTCCGTTTGATA 59.700 45.455 0.00 0.00 40.17 2.15
122 123 3.055675 TCCGTTTGGACTCCGTTTGATAT 60.056 43.478 0.00 0.00 40.17 1.63
123 124 3.687698 CCGTTTGGACTCCGTTTGATATT 59.312 43.478 0.00 0.00 37.49 1.28
124 125 4.201783 CCGTTTGGACTCCGTTTGATATTC 60.202 45.833 0.00 0.00 37.49 1.75
125 126 4.201783 CGTTTGGACTCCGTTTGATATTCC 60.202 45.833 0.00 0.00 0.00 3.01
126 127 4.837093 TTGGACTCCGTTTGATATTCCT 57.163 40.909 0.00 0.00 0.00 3.36
127 128 4.837093 TGGACTCCGTTTGATATTCCTT 57.163 40.909 0.00 0.00 0.00 3.36
128 129 5.174037 TGGACTCCGTTTGATATTCCTTT 57.826 39.130 0.00 0.00 0.00 3.11
129 130 5.566469 TGGACTCCGTTTGATATTCCTTTT 58.434 37.500 0.00 0.00 0.00 2.27
130 131 5.646360 TGGACTCCGTTTGATATTCCTTTTC 59.354 40.000 0.00 0.00 0.00 2.29
131 132 5.880887 GGACTCCGTTTGATATTCCTTTTCT 59.119 40.000 0.00 0.00 0.00 2.52
132 133 6.374613 GGACTCCGTTTGATATTCCTTTTCTT 59.625 38.462 0.00 0.00 0.00 2.52
133 134 7.379098 ACTCCGTTTGATATTCCTTTTCTTC 57.621 36.000 0.00 0.00 0.00 2.87
134 135 6.092259 ACTCCGTTTGATATTCCTTTTCTTCG 59.908 38.462 0.00 0.00 0.00 3.79
135 136 6.167685 TCCGTTTGATATTCCTTTTCTTCGA 58.832 36.000 0.00 0.00 0.00 3.71
136 137 6.651643 TCCGTTTGATATTCCTTTTCTTCGAA 59.348 34.615 0.00 0.00 0.00 3.71
137 138 7.173562 TCCGTTTGATATTCCTTTTCTTCGAAA 59.826 33.333 0.00 0.00 0.00 3.46
138 139 7.270579 CCGTTTGATATTCCTTTTCTTCGAAAC 59.729 37.037 0.00 0.00 0.00 2.78
139 140 7.801315 CGTTTGATATTCCTTTTCTTCGAAACA 59.199 33.333 0.00 0.00 0.00 2.83
140 141 8.902735 GTTTGATATTCCTTTTCTTCGAAACAC 58.097 33.333 0.00 0.00 0.00 3.32
141 142 7.979444 TGATATTCCTTTTCTTCGAAACACT 57.021 32.000 0.00 0.00 0.00 3.55
142 143 7.806690 TGATATTCCTTTTCTTCGAAACACTG 58.193 34.615 0.00 0.00 0.00 3.66
143 144 7.659799 TGATATTCCTTTTCTTCGAAACACTGA 59.340 33.333 0.00 0.00 0.00 3.41
144 145 6.693315 ATTCCTTTTCTTCGAAACACTGAA 57.307 33.333 0.00 0.00 0.00 3.02
145 146 6.503589 TTCCTTTTCTTCGAAACACTGAAA 57.496 33.333 0.00 2.34 0.00 2.69
146 147 6.693315 TCCTTTTCTTCGAAACACTGAAAT 57.307 33.333 9.49 0.00 0.00 2.17
147 148 7.795482 TCCTTTTCTTCGAAACACTGAAATA 57.205 32.000 9.49 2.77 0.00 1.40
148 149 7.861630 TCCTTTTCTTCGAAACACTGAAATAG 58.138 34.615 9.49 9.48 0.00 1.73
149 150 7.041372 TCCTTTTCTTCGAAACACTGAAATAGG 60.041 37.037 18.83 18.83 32.66 2.57
150 151 5.607119 TTCTTCGAAACACTGAAATAGGC 57.393 39.130 0.00 0.00 0.00 3.93
151 152 4.637276 TCTTCGAAACACTGAAATAGGCA 58.363 39.130 0.00 0.00 0.00 4.75
152 153 5.060506 TCTTCGAAACACTGAAATAGGCAA 58.939 37.500 0.00 0.00 0.00 4.52
153 154 5.179368 TCTTCGAAACACTGAAATAGGCAAG 59.821 40.000 0.00 0.00 0.00 4.01
154 155 4.637276 TCGAAACACTGAAATAGGCAAGA 58.363 39.130 0.00 0.00 0.00 3.02
155 156 5.060506 TCGAAACACTGAAATAGGCAAGAA 58.939 37.500 0.00 0.00 0.00 2.52
156 157 5.529430 TCGAAACACTGAAATAGGCAAGAAA 59.471 36.000 0.00 0.00 0.00 2.52
157 158 6.038825 TCGAAACACTGAAATAGGCAAGAAAA 59.961 34.615 0.00 0.00 0.00 2.29
158 159 6.142320 CGAAACACTGAAATAGGCAAGAAAAC 59.858 38.462 0.00 0.00 0.00 2.43
159 160 6.463995 AACACTGAAATAGGCAAGAAAACA 57.536 33.333 0.00 0.00 0.00 2.83
160 161 6.463995 ACACTGAAATAGGCAAGAAAACAA 57.536 33.333 0.00 0.00 0.00 2.83
161 162 6.273071 ACACTGAAATAGGCAAGAAAACAAC 58.727 36.000 0.00 0.00 0.00 3.32
162 163 6.127479 ACACTGAAATAGGCAAGAAAACAACA 60.127 34.615 0.00 0.00 0.00 3.33
163 164 6.756074 CACTGAAATAGGCAAGAAAACAACAA 59.244 34.615 0.00 0.00 0.00 2.83
164 165 7.439056 CACTGAAATAGGCAAGAAAACAACAAT 59.561 33.333 0.00 0.00 0.00 2.71
165 166 7.986889 ACTGAAATAGGCAAGAAAACAACAATT 59.013 29.630 0.00 0.00 0.00 2.32
166 167 8.729805 TGAAATAGGCAAGAAAACAACAATTT 57.270 26.923 0.00 0.00 0.00 1.82
167 168 8.610896 TGAAATAGGCAAGAAAACAACAATTTG 58.389 29.630 0.00 0.00 38.83 2.32
168 169 7.495135 AATAGGCAAGAAAACAACAATTTGG 57.505 32.000 0.78 0.00 37.00 3.28
169 170 4.198530 AGGCAAGAAAACAACAATTTGGG 58.801 39.130 0.78 0.00 37.00 4.12
170 171 3.944650 GGCAAGAAAACAACAATTTGGGT 59.055 39.130 0.78 0.00 37.00 4.51
171 172 4.397730 GGCAAGAAAACAACAATTTGGGTT 59.602 37.500 0.78 2.48 37.00 4.11
176 177 3.320823 CAACAATTTGGGTTGGGCC 57.679 52.632 0.00 0.00 41.41 5.80
177 178 0.764271 CAACAATTTGGGTTGGGCCT 59.236 50.000 4.53 0.00 41.41 5.19
178 179 1.055849 AACAATTTGGGTTGGGCCTC 58.944 50.000 4.53 0.00 37.43 4.70
179 180 0.835971 ACAATTTGGGTTGGGCCTCC 60.836 55.000 4.53 7.48 37.43 4.30
180 181 1.609210 AATTTGGGTTGGGCCTCCG 60.609 57.895 4.53 0.00 37.43 4.63
181 182 3.600410 ATTTGGGTTGGGCCTCCGG 62.600 63.158 4.53 0.00 37.43 5.14
184 185 3.332385 GGGTTGGGCCTCCGGTTA 61.332 66.667 4.53 0.00 37.43 2.85
185 186 2.758434 GGTTGGGCCTCCGGTTAA 59.242 61.111 4.53 0.00 35.24 2.01
186 187 1.305287 GGTTGGGCCTCCGGTTAAT 59.695 57.895 4.53 0.00 35.24 1.40
187 188 0.547553 GGTTGGGCCTCCGGTTAATA 59.452 55.000 4.53 0.00 35.24 0.98
188 189 1.476291 GGTTGGGCCTCCGGTTAATAG 60.476 57.143 4.53 0.00 35.24 1.73
189 190 0.841289 TTGGGCCTCCGGTTAATAGG 59.159 55.000 4.53 0.51 35.24 2.57
190 191 0.326808 TGGGCCTCCGGTTAATAGGT 60.327 55.000 4.53 0.00 35.24 3.08
191 192 0.841961 GGGCCTCCGGTTAATAGGTT 59.158 55.000 0.84 0.00 32.67 3.50
192 193 2.049372 GGGCCTCCGGTTAATAGGTTA 58.951 52.381 0.84 0.00 32.67 2.85
193 194 2.038164 GGGCCTCCGGTTAATAGGTTAG 59.962 54.545 0.84 0.00 32.67 2.34
194 195 2.702478 GGCCTCCGGTTAATAGGTTAGT 59.298 50.000 0.00 0.00 32.67 2.24
195 196 3.244009 GGCCTCCGGTTAATAGGTTAGTC 60.244 52.174 0.00 0.00 32.67 2.59
196 197 3.244009 GCCTCCGGTTAATAGGTTAGTCC 60.244 52.174 0.00 0.00 32.67 3.85
197 198 3.323115 CCTCCGGTTAATAGGTTAGTCCC 59.677 52.174 0.00 0.00 36.75 4.46
198 199 3.962718 CTCCGGTTAATAGGTTAGTCCCA 59.037 47.826 0.00 0.00 36.75 4.37
199 200 4.360889 TCCGGTTAATAGGTTAGTCCCAA 58.639 43.478 0.00 0.00 36.75 4.12
200 201 4.782156 TCCGGTTAATAGGTTAGTCCCAAA 59.218 41.667 0.00 0.00 36.75 3.28
201 202 5.250313 TCCGGTTAATAGGTTAGTCCCAAAA 59.750 40.000 0.00 0.00 36.75 2.44
202 203 5.945191 CCGGTTAATAGGTTAGTCCCAAAAA 59.055 40.000 0.00 0.00 36.75 1.94
203 204 6.604396 CCGGTTAATAGGTTAGTCCCAAAAAT 59.396 38.462 0.00 0.00 36.75 1.82
204 205 7.415877 CCGGTTAATAGGTTAGTCCCAAAAATG 60.416 40.741 0.00 0.00 36.75 2.32
205 206 7.337436 CGGTTAATAGGTTAGTCCCAAAAATGA 59.663 37.037 0.00 0.00 36.75 2.57
206 207 9.197306 GGTTAATAGGTTAGTCCCAAAAATGAT 57.803 33.333 0.00 0.00 36.75 2.45
229 230 9.742144 TGATATAAAAGTGTAAAGTAAAGCCCA 57.258 29.630 0.00 0.00 0.00 5.36
235 236 7.826918 AAGTGTAAAGTAAAGCCCATAAACA 57.173 32.000 0.00 0.00 0.00 2.83
236 237 8.417273 AAGTGTAAAGTAAAGCCCATAAACAT 57.583 30.769 0.00 0.00 0.00 2.71
237 238 8.051901 AGTGTAAAGTAAAGCCCATAAACATC 57.948 34.615 0.00 0.00 0.00 3.06
238 239 7.122204 AGTGTAAAGTAAAGCCCATAAACATCC 59.878 37.037 0.00 0.00 0.00 3.51
239 240 6.948886 TGTAAAGTAAAGCCCATAAACATCCA 59.051 34.615 0.00 0.00 0.00 3.41
240 241 6.926630 AAAGTAAAGCCCATAAACATCCAA 57.073 33.333 0.00 0.00 0.00 3.53
241 242 6.926630 AAGTAAAGCCCATAAACATCCAAA 57.073 33.333 0.00 0.00 0.00 3.28
242 243 6.926630 AGTAAAGCCCATAAACATCCAAAA 57.073 33.333 0.00 0.00 0.00 2.44
243 244 6.697395 AGTAAAGCCCATAAACATCCAAAAC 58.303 36.000 0.00 0.00 0.00 2.43
244 245 5.559148 AAAGCCCATAAACATCCAAAACA 57.441 34.783 0.00 0.00 0.00 2.83
245 246 5.559148 AAGCCCATAAACATCCAAAACAA 57.441 34.783 0.00 0.00 0.00 2.83
246 247 5.151297 AGCCCATAAACATCCAAAACAAG 57.849 39.130 0.00 0.00 0.00 3.16
247 248 4.592778 AGCCCATAAACATCCAAAACAAGT 59.407 37.500 0.00 0.00 0.00 3.16
248 249 5.777732 AGCCCATAAACATCCAAAACAAGTA 59.222 36.000 0.00 0.00 0.00 2.24
249 250 6.268847 AGCCCATAAACATCCAAAACAAGTAA 59.731 34.615 0.00 0.00 0.00 2.24
250 251 7.038373 AGCCCATAAACATCCAAAACAAGTAAT 60.038 33.333 0.00 0.00 0.00 1.89
251 252 8.254508 GCCCATAAACATCCAAAACAAGTAATA 58.745 33.333 0.00 0.00 0.00 0.98
397 398 1.287815 GTGGGCGCCTTGGTTTAAC 59.712 57.895 28.56 6.48 0.00 2.01
403 404 1.887854 GCGCCTTGGTTTAACCCTTTA 59.112 47.619 12.02 0.00 37.50 1.85
490 491 2.486370 GCCTATGAGGGGAAGAAGAAGC 60.486 54.545 0.00 0.00 35.37 3.86
808 844 1.307084 GACTAGCCTTGGAGGGGGT 60.307 63.158 0.00 0.00 35.37 4.95
899 935 6.206634 GCTCAATCCGGATGGTTGAAATAATA 59.793 38.462 19.95 0.00 35.94 0.98
1087 1130 1.347707 AGGACGCATCTTTGGACAAGA 59.652 47.619 0.00 0.00 0.00 3.02
1336 1379 2.685380 CAGTCCCCGCCTCCTCTT 60.685 66.667 0.00 0.00 0.00 2.85
1397 1440 7.797121 AAAGATGTCCAAAAGGACCAATATT 57.203 32.000 11.79 1.48 38.04 1.28
1463 1506 1.003233 GGCTTGGAGGAAGAGCGTT 60.003 57.895 0.00 0.00 37.29 4.84
1613 1657 2.814097 CGTGACAAGAAGGGGAAATGGT 60.814 50.000 0.00 0.00 0.00 3.55
1767 1815 5.876612 TTGCCATTTGTATTGAATTTGGC 57.123 34.783 5.27 5.27 40.05 4.52
1846 1894 5.978919 TGATTTGTCTGCAATTTCTGTGAAC 59.021 36.000 0.00 0.00 34.18 3.18
1891 1981 7.040686 GGCAGAACAAAGGATTACTCTGTTTTA 60.041 37.037 0.00 0.00 32.71 1.52
1902 1992 9.880064 GGATTACTCTGTTTTACTCTGTTTTTC 57.120 33.333 0.00 0.00 0.00 2.29
1953 2051 1.202313 GGGCTAAGCTACTGTGACGAG 60.202 57.143 0.00 0.00 0.00 4.18
1954 2052 1.743958 GGCTAAGCTACTGTGACGAGA 59.256 52.381 0.00 0.00 0.00 4.04
1958 2056 4.684703 GCTAAGCTACTGTGACGAGAAAAA 59.315 41.667 0.00 0.00 0.00 1.94
1962 2060 4.508124 AGCTACTGTGACGAGAAAAACAAG 59.492 41.667 0.00 0.00 0.00 3.16
1963 2061 4.506654 GCTACTGTGACGAGAAAAACAAGA 59.493 41.667 0.00 0.00 0.00 3.02
1964 2062 5.006358 GCTACTGTGACGAGAAAAACAAGAA 59.994 40.000 0.00 0.00 0.00 2.52
1966 2064 4.094442 ACTGTGACGAGAAAAACAAGAACC 59.906 41.667 0.00 0.00 0.00 3.62
1998 2096 2.143129 GGGACCCTACCACCATAGC 58.857 63.158 2.09 0.00 0.00 2.97
2000 2098 0.400093 GGACCCTACCACCATAGCCT 60.400 60.000 0.00 0.00 0.00 4.58
2016 2114 2.662596 CTCTGGCGGTAGGTTGCA 59.337 61.111 0.00 0.00 0.00 4.08
2020 2118 2.257409 CTGGCGGTAGGTTGCAGGAT 62.257 60.000 0.00 0.00 0.00 3.24
2032 2130 3.142393 CAGGATCCTACCGCCAGG 58.858 66.667 15.67 0.00 45.13 4.45
2033 2131 2.122813 AGGATCCTACCGCCAGGG 60.123 66.667 14.27 0.00 43.47 4.45
2034 2132 2.122989 GGATCCTACCGCCAGGGA 60.123 66.667 3.84 0.00 43.47 4.20
2067 2165 2.959465 GGGGGCTAAGCTATTGTGAT 57.041 50.000 0.00 0.00 0.00 3.06
2069 2167 2.106511 GGGGGCTAAGCTATTGTGATGA 59.893 50.000 0.00 0.00 0.00 2.92
2070 2168 3.406764 GGGGCTAAGCTATTGTGATGAG 58.593 50.000 0.00 0.00 0.00 2.90
2074 2172 5.590259 GGGCTAAGCTATTGTGATGAGAAAA 59.410 40.000 0.00 0.00 0.00 2.29
2076 2174 7.201857 GGGCTAAGCTATTGTGATGAGAAAAAT 60.202 37.037 0.00 0.00 0.00 1.82
2077 2175 7.646922 GGCTAAGCTATTGTGATGAGAAAAATG 59.353 37.037 0.00 0.00 0.00 2.32
2080 2178 7.934855 AGCTATTGTGATGAGAAAAATGAGT 57.065 32.000 0.00 0.00 0.00 3.41
2100 2198 4.368003 CCTGGCGGTAGGGTAAGA 57.632 61.111 0.00 0.00 34.06 2.10
2101 2199 2.599216 CCTGGCGGTAGGGTAAGAA 58.401 57.895 0.00 0.00 34.06 2.52
2102 2200 0.464452 CCTGGCGGTAGGGTAAGAAG 59.536 60.000 0.00 0.00 34.06 2.85
2113 2211 0.251073 GGTAAGAAGCCTACCGCCAA 59.749 55.000 0.00 0.00 38.78 4.52
2114 2212 1.339342 GGTAAGAAGCCTACCGCCAAA 60.339 52.381 0.00 0.00 38.78 3.28
2115 2213 2.640184 GTAAGAAGCCTACCGCCAAAT 58.360 47.619 0.00 0.00 38.78 2.32
2119 2217 1.315257 AAGCCTACCGCCAAATGCTG 61.315 55.000 0.00 0.00 38.78 4.41
2132 2230 2.536997 AATGCTGTGGCGGTAGGGTC 62.537 60.000 0.00 0.00 42.25 4.46
2133 2231 3.702048 GCTGTGGCGGTAGGGTCA 61.702 66.667 0.00 0.00 0.00 4.02
2162 2260 1.112916 CCAGGGTGCCCGTTTTTCTT 61.113 55.000 0.98 0.00 41.95 2.52
2165 2263 0.031585 GGGTGCCCGTTTTTCTTGTC 59.968 55.000 0.00 0.00 0.00 3.18
2167 2265 1.535226 GGTGCCCGTTTTTCTTGTCAC 60.535 52.381 0.00 0.00 0.00 3.67
2175 2273 5.028375 CCGTTTTTCTTGTCACAGAAACTC 58.972 41.667 8.71 5.88 41.52 3.01
2205 2305 2.505982 CATGGTCCCTGGCGGTAG 59.494 66.667 0.00 0.00 0.00 3.18
2207 2307 3.326385 ATGGTCCCTGGCGGTAGGA 62.326 63.158 2.18 0.00 40.42 2.94
2211 2311 2.122813 CCCTGGCGGTAGGATCCT 60.123 66.667 20.48 20.48 40.42 3.24
2215 2315 1.971505 CTGGCGGTAGGATCCTGCAA 61.972 60.000 28.38 14.80 0.00 4.08
2226 2326 2.257409 ATCCTGCAACCTACCGCCAG 62.257 60.000 0.00 0.00 0.00 4.85
2227 2327 2.662596 CTGCAACCTACCGCCAGA 59.337 61.111 0.00 0.00 0.00 3.86
2229 2329 2.125106 GCAACCTACCGCCAGAGG 60.125 66.667 0.00 0.00 38.92 3.69
2247 2347 2.038837 GCTGTGGCGGTAGGGTTTC 61.039 63.158 0.00 0.00 0.00 2.78
2248 2348 1.373435 CTGTGGCGGTAGGGTTTCA 59.627 57.895 0.00 0.00 0.00 2.69
2249 2349 0.250553 CTGTGGCGGTAGGGTTTCAA 60.251 55.000 0.00 0.00 0.00 2.69
2250 2350 0.402504 TGTGGCGGTAGGGTTTCAAT 59.597 50.000 0.00 0.00 0.00 2.57
2251 2351 1.092348 GTGGCGGTAGGGTTTCAATC 58.908 55.000 0.00 0.00 0.00 2.67
2252 2352 0.034863 TGGCGGTAGGGTTTCAATCC 60.035 55.000 0.00 0.00 0.00 3.01
2253 2353 0.255033 GGCGGTAGGGTTTCAATCCT 59.745 55.000 0.00 0.00 43.47 3.24
2254 2354 1.664873 GCGGTAGGGTTTCAATCCTC 58.335 55.000 0.00 0.00 39.27 3.71
2255 2355 1.209747 GCGGTAGGGTTTCAATCCTCT 59.790 52.381 0.00 0.00 39.27 3.69
2256 2356 2.742204 GCGGTAGGGTTTCAATCCTCTC 60.742 54.545 0.00 0.00 39.27 3.20
2257 2357 2.158943 CGGTAGGGTTTCAATCCTCTCC 60.159 54.545 0.00 0.00 39.27 3.71
2258 2358 3.116174 GGTAGGGTTTCAATCCTCTCCT 58.884 50.000 0.00 0.00 39.27 3.69
2259 2359 3.134985 GGTAGGGTTTCAATCCTCTCCTC 59.865 52.174 0.00 0.00 39.27 3.71
2260 2360 2.200955 AGGGTTTCAATCCTCTCCTCC 58.799 52.381 0.00 0.00 32.95 4.30
2261 2361 1.213182 GGGTTTCAATCCTCTCCTCCC 59.787 57.143 0.00 0.00 0.00 4.30
2262 2362 1.213182 GGTTTCAATCCTCTCCTCCCC 59.787 57.143 0.00 0.00 0.00 4.81
2263 2363 2.200955 GTTTCAATCCTCTCCTCCCCT 58.799 52.381 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 3.649277 CTTCGAGGTGGCCACGAGG 62.649 68.421 29.08 19.50 45.90 4.63
13 14 2.125912 CTTCGAGGTGGCCACGAG 60.126 66.667 29.08 21.37 45.90 4.18
14 15 4.373116 GCTTCGAGGTGGCCACGA 62.373 66.667 29.08 20.68 44.00 4.35
15 16 4.379243 AGCTTCGAGGTGGCCACG 62.379 66.667 29.08 18.56 38.87 4.94
16 17 2.435059 GAGCTTCGAGGTGGCCAC 60.435 66.667 28.57 28.57 0.00 5.01
17 18 3.706373 GGAGCTTCGAGGTGGCCA 61.706 66.667 0.00 0.00 0.00 5.36
18 19 4.475135 GGGAGCTTCGAGGTGGCC 62.475 72.222 0.00 0.00 0.00 5.36
19 20 3.394836 AGGGAGCTTCGAGGTGGC 61.395 66.667 0.00 0.00 0.00 5.01
20 21 1.984570 TCAGGGAGCTTCGAGGTGG 60.985 63.158 0.00 0.00 0.00 4.61
21 22 1.216710 GTCAGGGAGCTTCGAGGTG 59.783 63.158 0.00 0.00 0.00 4.00
22 23 2.344203 CGTCAGGGAGCTTCGAGGT 61.344 63.158 0.00 0.00 0.00 3.85
23 24 2.272918 GACGTCAGGGAGCTTCGAGG 62.273 65.000 11.55 0.00 0.00 4.63
24 25 1.137825 GACGTCAGGGAGCTTCGAG 59.862 63.158 11.55 0.00 0.00 4.04
25 26 0.035725 TAGACGTCAGGGAGCTTCGA 60.036 55.000 19.50 0.00 0.00 3.71
26 27 0.099082 GTAGACGTCAGGGAGCTTCG 59.901 60.000 19.50 0.00 0.00 3.79
27 28 1.402613 GAGTAGACGTCAGGGAGCTTC 59.597 57.143 19.50 0.00 0.00 3.86
28 29 1.004979 AGAGTAGACGTCAGGGAGCTT 59.995 52.381 19.50 0.00 0.00 3.74
29 30 0.621609 AGAGTAGACGTCAGGGAGCT 59.378 55.000 19.50 5.84 0.00 4.09
30 31 2.328819 TAGAGTAGACGTCAGGGAGC 57.671 55.000 19.50 1.74 0.00 4.70
31 32 3.872771 GACTTAGAGTAGACGTCAGGGAG 59.127 52.174 19.50 8.30 0.00 4.30
32 33 3.518705 AGACTTAGAGTAGACGTCAGGGA 59.481 47.826 19.50 0.00 0.00 4.20
33 34 3.872771 GAGACTTAGAGTAGACGTCAGGG 59.127 52.174 19.50 1.47 0.00 4.45
34 35 3.872771 GGAGACTTAGAGTAGACGTCAGG 59.127 52.174 19.50 0.00 0.00 3.86
35 36 4.569162 CAGGAGACTTAGAGTAGACGTCAG 59.431 50.000 19.50 6.80 40.21 3.51
36 37 4.505808 CAGGAGACTTAGAGTAGACGTCA 58.494 47.826 19.50 0.48 40.21 4.35
37 38 3.872771 CCAGGAGACTTAGAGTAGACGTC 59.127 52.174 7.70 7.70 40.21 4.34
38 39 3.518705 TCCAGGAGACTTAGAGTAGACGT 59.481 47.826 0.00 0.00 40.21 4.34
39 40 4.139859 TCCAGGAGACTTAGAGTAGACG 57.860 50.000 0.00 0.00 40.21 4.18
40 41 5.221165 GCAATCCAGGAGACTTAGAGTAGAC 60.221 48.000 0.00 0.00 40.21 2.59
41 42 4.890581 GCAATCCAGGAGACTTAGAGTAGA 59.109 45.833 0.00 0.00 40.21 2.59
42 43 4.892934 AGCAATCCAGGAGACTTAGAGTAG 59.107 45.833 0.00 0.00 40.21 2.57
43 44 4.873010 AGCAATCCAGGAGACTTAGAGTA 58.127 43.478 0.00 0.00 40.21 2.59
44 45 3.718723 AGCAATCCAGGAGACTTAGAGT 58.281 45.455 0.00 0.00 40.21 3.24
45 46 4.692228 GAAGCAATCCAGGAGACTTAGAG 58.308 47.826 0.00 0.00 40.21 2.43
46 47 4.744795 GAAGCAATCCAGGAGACTTAGA 57.255 45.455 0.00 0.00 40.21 2.10
58 59 3.378911 TTTTTGGAACGGAAGCAATCC 57.621 42.857 0.00 0.00 45.57 3.01
59 60 6.156519 AGTTATTTTTGGAACGGAAGCAATC 58.843 36.000 0.00 0.00 0.00 2.67
60 61 6.015434 AGAGTTATTTTTGGAACGGAAGCAAT 60.015 34.615 0.00 0.00 0.00 3.56
61 62 5.300792 AGAGTTATTTTTGGAACGGAAGCAA 59.699 36.000 0.00 0.00 0.00 3.91
62 63 4.825085 AGAGTTATTTTTGGAACGGAAGCA 59.175 37.500 0.00 0.00 0.00 3.91
63 64 5.181433 AGAGAGTTATTTTTGGAACGGAAGC 59.819 40.000 0.00 0.00 0.00 3.86
64 65 6.401153 CGAGAGAGTTATTTTTGGAACGGAAG 60.401 42.308 0.00 0.00 0.00 3.46
65 66 5.407387 CGAGAGAGTTATTTTTGGAACGGAA 59.593 40.000 0.00 0.00 0.00 4.30
66 67 4.927425 CGAGAGAGTTATTTTTGGAACGGA 59.073 41.667 0.00 0.00 0.00 4.69
67 68 4.927425 TCGAGAGAGTTATTTTTGGAACGG 59.073 41.667 0.00 0.00 34.84 4.44
68 69 6.401153 CCTTCGAGAGAGTTATTTTTGGAACG 60.401 42.308 0.00 0.00 43.69 3.95
69 70 6.427242 ACCTTCGAGAGAGTTATTTTTGGAAC 59.573 38.462 0.00 0.00 43.69 3.62
70 71 6.531021 ACCTTCGAGAGAGTTATTTTTGGAA 58.469 36.000 0.00 0.00 43.69 3.53
71 72 6.110411 ACCTTCGAGAGAGTTATTTTTGGA 57.890 37.500 0.00 0.00 43.69 3.53
72 73 6.803154 AACCTTCGAGAGAGTTATTTTTGG 57.197 37.500 0.00 0.00 43.69 3.28
73 74 7.861630 TGAAACCTTCGAGAGAGTTATTTTTG 58.138 34.615 0.00 0.00 43.69 2.44
74 75 8.622948 ATGAAACCTTCGAGAGAGTTATTTTT 57.377 30.769 0.00 0.00 43.69 1.94
75 76 8.622948 AATGAAACCTTCGAGAGAGTTATTTT 57.377 30.769 0.00 0.00 43.69 1.82
76 77 7.334671 GGAATGAAACCTTCGAGAGAGTTATTT 59.665 37.037 0.00 0.00 43.69 1.40
77 78 6.819146 GGAATGAAACCTTCGAGAGAGTTATT 59.181 38.462 0.00 0.00 43.69 1.40
78 79 6.342111 GGAATGAAACCTTCGAGAGAGTTAT 58.658 40.000 0.00 0.00 43.69 1.89
79 80 5.621555 CGGAATGAAACCTTCGAGAGAGTTA 60.622 44.000 0.00 0.00 43.69 2.24
80 81 4.570930 GGAATGAAACCTTCGAGAGAGTT 58.429 43.478 0.00 0.00 43.69 3.01
81 82 3.367498 CGGAATGAAACCTTCGAGAGAGT 60.367 47.826 0.00 0.00 43.69 3.24
82 83 3.182967 CGGAATGAAACCTTCGAGAGAG 58.817 50.000 0.00 0.00 43.69 3.20
83 84 2.561419 ACGGAATGAAACCTTCGAGAGA 59.439 45.455 0.00 0.00 39.20 3.10
84 85 2.960819 ACGGAATGAAACCTTCGAGAG 58.039 47.619 0.00 0.00 0.00 3.20
85 86 3.396260 AACGGAATGAAACCTTCGAGA 57.604 42.857 0.00 0.00 0.00 4.04
86 87 3.364964 CCAAACGGAATGAAACCTTCGAG 60.365 47.826 0.00 0.00 0.00 4.04
87 88 2.550606 CCAAACGGAATGAAACCTTCGA 59.449 45.455 0.00 0.00 0.00 3.71
88 89 2.550606 TCCAAACGGAATGAAACCTTCG 59.449 45.455 0.00 0.00 0.00 3.79
89 90 3.568430 AGTCCAAACGGAATGAAACCTTC 59.432 43.478 0.00 0.00 33.16 3.46
90 91 3.562182 AGTCCAAACGGAATGAAACCTT 58.438 40.909 0.00 0.00 33.16 3.50
91 92 3.146847 GAGTCCAAACGGAATGAAACCT 58.853 45.455 0.00 0.00 33.16 3.50
92 93 2.228103 GGAGTCCAAACGGAATGAAACC 59.772 50.000 3.60 0.00 33.16 3.27
93 94 2.095919 CGGAGTCCAAACGGAATGAAAC 60.096 50.000 10.49 0.00 33.16 2.78
94 95 2.147958 CGGAGTCCAAACGGAATGAAA 58.852 47.619 10.49 0.00 33.16 2.69
95 96 1.071071 ACGGAGTCCAAACGGAATGAA 59.929 47.619 10.49 0.00 29.74 2.57
96 97 0.682852 ACGGAGTCCAAACGGAATGA 59.317 50.000 10.49 0.00 29.74 2.57
97 98 1.519408 AACGGAGTCCAAACGGAATG 58.481 50.000 10.49 0.00 45.00 2.67
98 99 1.877443 CAAACGGAGTCCAAACGGAAT 59.123 47.619 10.49 0.00 45.00 3.01
99 100 1.134461 TCAAACGGAGTCCAAACGGAA 60.134 47.619 10.49 0.00 45.00 4.30
100 101 0.464870 TCAAACGGAGTCCAAACGGA 59.535 50.000 10.49 0.00 45.00 4.69
101 102 1.519408 ATCAAACGGAGTCCAAACGG 58.481 50.000 10.49 0.00 45.00 4.44
102 103 4.201783 GGAATATCAAACGGAGTCCAAACG 60.202 45.833 10.49 0.00 45.00 3.60
103 104 4.941873 AGGAATATCAAACGGAGTCCAAAC 59.058 41.667 10.49 0.00 45.00 2.93
104 105 5.174037 AGGAATATCAAACGGAGTCCAAA 57.826 39.130 10.49 0.00 45.00 3.28
105 106 4.837093 AGGAATATCAAACGGAGTCCAA 57.163 40.909 10.49 0.00 45.00 3.53
106 107 4.837093 AAGGAATATCAAACGGAGTCCA 57.163 40.909 10.49 0.00 45.00 4.02
107 108 5.880887 AGAAAAGGAATATCAAACGGAGTCC 59.119 40.000 0.00 0.00 45.00 3.85
108 109 6.986904 AGAAAAGGAATATCAAACGGAGTC 57.013 37.500 0.00 0.00 45.00 3.36
110 111 6.312918 TCGAAGAAAAGGAATATCAAACGGAG 59.687 38.462 0.00 0.00 0.00 4.63
111 112 6.167685 TCGAAGAAAAGGAATATCAAACGGA 58.832 36.000 0.00 0.00 0.00 4.69
112 113 6.417191 TCGAAGAAAAGGAATATCAAACGG 57.583 37.500 0.00 0.00 0.00 4.44
113 114 7.801315 TGTTTCGAAGAAAAGGAATATCAAACG 59.199 33.333 0.00 0.00 45.90 3.60
114 115 8.902735 GTGTTTCGAAGAAAAGGAATATCAAAC 58.097 33.333 0.00 0.00 45.90 2.93
115 116 8.846211 AGTGTTTCGAAGAAAAGGAATATCAAA 58.154 29.630 0.00 0.00 45.90 2.69
116 117 8.289618 CAGTGTTTCGAAGAAAAGGAATATCAA 58.710 33.333 0.00 0.00 45.90 2.57
117 118 7.659799 TCAGTGTTTCGAAGAAAAGGAATATCA 59.340 33.333 0.00 0.00 45.90 2.15
118 119 8.029642 TCAGTGTTTCGAAGAAAAGGAATATC 57.970 34.615 0.00 0.00 45.90 1.63
119 120 7.979444 TCAGTGTTTCGAAGAAAAGGAATAT 57.021 32.000 0.00 0.00 45.90 1.28
120 121 7.795482 TTCAGTGTTTCGAAGAAAAGGAATA 57.205 32.000 0.00 0.00 45.90 1.75
121 122 6.693315 TTCAGTGTTTCGAAGAAAAGGAAT 57.307 33.333 0.00 0.00 45.90 3.01
122 123 6.503589 TTTCAGTGTTTCGAAGAAAAGGAA 57.496 33.333 6.96 2.71 45.90 3.36
123 124 6.693315 ATTTCAGTGTTTCGAAGAAAAGGA 57.307 33.333 11.92 0.00 45.90 3.36
124 125 7.078228 CCTATTTCAGTGTTTCGAAGAAAAGG 58.922 38.462 11.92 13.94 45.90 3.11
125 126 6.578919 GCCTATTTCAGTGTTTCGAAGAAAAG 59.421 38.462 11.92 10.48 45.90 2.27
126 127 6.038825 TGCCTATTTCAGTGTTTCGAAGAAAA 59.961 34.615 11.92 3.47 45.90 2.29
127 128 5.529430 TGCCTATTTCAGTGTTTCGAAGAAA 59.471 36.000 10.72 10.72 45.90 2.52
128 129 5.060506 TGCCTATTTCAGTGTTTCGAAGAA 58.939 37.500 0.00 0.00 45.90 2.52
129 130 4.637276 TGCCTATTTCAGTGTTTCGAAGA 58.363 39.130 0.00 0.00 0.00 2.87
130 131 5.179368 TCTTGCCTATTTCAGTGTTTCGAAG 59.821 40.000 0.00 0.00 0.00 3.79
131 132 5.060506 TCTTGCCTATTTCAGTGTTTCGAA 58.939 37.500 0.00 0.00 0.00 3.71
132 133 4.637276 TCTTGCCTATTTCAGTGTTTCGA 58.363 39.130 0.00 0.00 0.00 3.71
133 134 5.356882 TTCTTGCCTATTTCAGTGTTTCG 57.643 39.130 0.00 0.00 0.00 3.46
134 135 6.978080 TGTTTTCTTGCCTATTTCAGTGTTTC 59.022 34.615 0.00 0.00 0.00 2.78
135 136 6.872920 TGTTTTCTTGCCTATTTCAGTGTTT 58.127 32.000 0.00 0.00 0.00 2.83
136 137 6.463995 TGTTTTCTTGCCTATTTCAGTGTT 57.536 33.333 0.00 0.00 0.00 3.32
137 138 6.127479 TGTTGTTTTCTTGCCTATTTCAGTGT 60.127 34.615 0.00 0.00 0.00 3.55
138 139 6.272318 TGTTGTTTTCTTGCCTATTTCAGTG 58.728 36.000 0.00 0.00 0.00 3.66
139 140 6.463995 TGTTGTTTTCTTGCCTATTTCAGT 57.536 33.333 0.00 0.00 0.00 3.41
140 141 7.951530 ATTGTTGTTTTCTTGCCTATTTCAG 57.048 32.000 0.00 0.00 0.00 3.02
141 142 8.610896 CAAATTGTTGTTTTCTTGCCTATTTCA 58.389 29.630 0.00 0.00 0.00 2.69
142 143 8.069574 CCAAATTGTTGTTTTCTTGCCTATTTC 58.930 33.333 0.00 0.00 32.40 2.17
143 144 7.013178 CCCAAATTGTTGTTTTCTTGCCTATTT 59.987 33.333 0.00 0.00 32.40 1.40
144 145 6.486320 CCCAAATTGTTGTTTTCTTGCCTATT 59.514 34.615 0.00 0.00 32.40 1.73
145 146 5.997129 CCCAAATTGTTGTTTTCTTGCCTAT 59.003 36.000 0.00 0.00 32.40 2.57
146 147 5.104735 ACCCAAATTGTTGTTTTCTTGCCTA 60.105 36.000 0.00 0.00 32.40 3.93
147 148 4.198530 CCCAAATTGTTGTTTTCTTGCCT 58.801 39.130 0.00 0.00 32.40 4.75
148 149 3.944650 ACCCAAATTGTTGTTTTCTTGCC 59.055 39.130 0.00 0.00 32.40 4.52
149 150 5.331098 CAACCCAAATTGTTGTTTTCTTGC 58.669 37.500 0.00 0.00 38.58 4.01
150 151 5.163673 CCCAACCCAAATTGTTGTTTTCTTG 60.164 40.000 6.44 0.00 41.13 3.02
151 152 4.946772 CCCAACCCAAATTGTTGTTTTCTT 59.053 37.500 6.44 0.00 41.13 2.52
152 153 4.522114 CCCAACCCAAATTGTTGTTTTCT 58.478 39.130 6.44 0.00 41.13 2.52
153 154 3.066064 GCCCAACCCAAATTGTTGTTTTC 59.934 43.478 6.44 0.00 41.13 2.29
154 155 3.020274 GCCCAACCCAAATTGTTGTTTT 58.980 40.909 6.44 0.00 41.13 2.43
155 156 2.649190 GCCCAACCCAAATTGTTGTTT 58.351 42.857 6.44 0.00 41.13 2.83
156 157 1.133945 GGCCCAACCCAAATTGTTGTT 60.134 47.619 0.00 0.00 41.13 2.83
157 158 0.472044 GGCCCAACCCAAATTGTTGT 59.528 50.000 0.00 0.00 41.13 3.32
158 159 0.764271 AGGCCCAACCCAAATTGTTG 59.236 50.000 0.00 1.17 42.11 3.33
159 160 1.055849 GAGGCCCAACCCAAATTGTT 58.944 50.000 0.00 0.00 40.58 2.83
160 161 0.835971 GGAGGCCCAACCCAAATTGT 60.836 55.000 0.00 0.00 40.58 2.71
161 162 1.887344 CGGAGGCCCAACCCAAATTG 61.887 60.000 0.00 0.00 40.58 2.32
162 163 1.609210 CGGAGGCCCAACCCAAATT 60.609 57.895 0.00 0.00 40.58 1.82
163 164 2.037208 CGGAGGCCCAACCCAAAT 59.963 61.111 0.00 0.00 40.58 2.32
164 165 4.293671 CCGGAGGCCCAACCCAAA 62.294 66.667 0.00 0.00 46.14 3.28
173 174 6.309757 GGACTAACCTATTAACCGGAGGCC 62.310 54.167 9.46 0.00 44.44 5.19
174 175 3.244009 GGACTAACCTATTAACCGGAGGC 60.244 52.174 9.46 0.00 44.44 4.70
175 176 4.597404 GGACTAACCTATTAACCGGAGG 57.403 50.000 9.46 6.51 45.59 4.30
176 177 3.962718 TGGGACTAACCTATTAACCGGAG 59.037 47.826 9.46 0.00 38.98 4.63
177 178 3.992999 TGGGACTAACCTATTAACCGGA 58.007 45.455 9.46 0.00 38.98 5.14
178 179 4.758773 TTGGGACTAACCTATTAACCGG 57.241 45.455 0.00 0.00 38.98 5.28
179 180 7.337436 TCATTTTTGGGACTAACCTATTAACCG 59.663 37.037 0.00 0.00 38.98 4.44
180 181 8.584063 TCATTTTTGGGACTAACCTATTAACC 57.416 34.615 0.00 0.00 38.98 2.85
203 204 9.742144 TGGGCTTTACTTTACACTTTTATATCA 57.258 29.630 0.00 0.00 0.00 2.15
209 210 8.697292 TGTTTATGGGCTTTACTTTACACTTTT 58.303 29.630 0.00 0.00 0.00 2.27
210 211 8.240267 TGTTTATGGGCTTTACTTTACACTTT 57.760 30.769 0.00 0.00 0.00 2.66
211 212 7.826918 TGTTTATGGGCTTTACTTTACACTT 57.173 32.000 0.00 0.00 0.00 3.16
212 213 7.122204 GGATGTTTATGGGCTTTACTTTACACT 59.878 37.037 0.00 0.00 0.00 3.55
213 214 7.094118 TGGATGTTTATGGGCTTTACTTTACAC 60.094 37.037 0.00 0.00 0.00 2.90
214 215 6.948886 TGGATGTTTATGGGCTTTACTTTACA 59.051 34.615 0.00 0.00 0.00 2.41
215 216 7.399245 TGGATGTTTATGGGCTTTACTTTAC 57.601 36.000 0.00 0.00 0.00 2.01
216 217 8.423906 TTTGGATGTTTATGGGCTTTACTTTA 57.576 30.769 0.00 0.00 0.00 1.85
217 218 6.926630 TTGGATGTTTATGGGCTTTACTTT 57.073 33.333 0.00 0.00 0.00 2.66
218 219 6.926630 TTTGGATGTTTATGGGCTTTACTT 57.073 33.333 0.00 0.00 0.00 2.24
219 220 6.268847 TGTTTTGGATGTTTATGGGCTTTACT 59.731 34.615 0.00 0.00 0.00 2.24
220 221 6.459923 TGTTTTGGATGTTTATGGGCTTTAC 58.540 36.000 0.00 0.00 0.00 2.01
221 222 6.672266 TGTTTTGGATGTTTATGGGCTTTA 57.328 33.333 0.00 0.00 0.00 1.85
222 223 5.559148 TGTTTTGGATGTTTATGGGCTTT 57.441 34.783 0.00 0.00 0.00 3.51
223 224 5.071653 ACTTGTTTTGGATGTTTATGGGCTT 59.928 36.000 0.00 0.00 0.00 4.35
224 225 4.592778 ACTTGTTTTGGATGTTTATGGGCT 59.407 37.500 0.00 0.00 0.00 5.19
225 226 4.893608 ACTTGTTTTGGATGTTTATGGGC 58.106 39.130 0.00 0.00 0.00 5.36
275 276 9.292195 TGTGATACGTCTCCAACATATCTATAA 57.708 33.333 0.00 0.00 34.78 0.98
276 277 8.727910 GTGTGATACGTCTCCAACATATCTATA 58.272 37.037 0.00 0.00 34.78 1.31
277 278 7.594714 GTGTGATACGTCTCCAACATATCTAT 58.405 38.462 0.00 0.00 34.78 1.98
278 279 6.967135 GTGTGATACGTCTCCAACATATCTA 58.033 40.000 0.00 0.00 34.78 1.98
279 280 5.833082 GTGTGATACGTCTCCAACATATCT 58.167 41.667 0.00 0.00 34.78 1.98
294 295 2.423577 AGTTTCTTGCCCGTGTGATAC 58.576 47.619 0.00 0.00 0.00 2.24
295 296 2.811431 CAAGTTTCTTGCCCGTGTGATA 59.189 45.455 0.00 0.00 0.00 2.15
296 297 1.608590 CAAGTTTCTTGCCCGTGTGAT 59.391 47.619 0.00 0.00 0.00 3.06
297 298 1.021202 CAAGTTTCTTGCCCGTGTGA 58.979 50.000 0.00 0.00 0.00 3.58
298 299 0.594796 GCAAGTTTCTTGCCCGTGTG 60.595 55.000 19.68 0.00 39.38 3.82
389 390 4.525100 GGCATCAAGTAAAGGGTTAAACCA 59.475 41.667 13.24 0.00 41.02 3.67
397 398 3.012518 CTGTGAGGCATCAAGTAAAGGG 58.987 50.000 0.92 0.00 37.14 3.95
403 404 3.639099 CCACTGTGAGGCATCAAGT 57.361 52.632 9.86 6.51 37.14 3.16
490 491 3.070159 TGTCACTCCTGAACCTCTTCTTG 59.930 47.826 0.00 0.00 0.00 3.02
577 578 5.336690 GCATTCTCCACAATTGTTGGTGTAT 60.337 40.000 8.77 10.73 33.19 2.29
578 579 4.022416 GCATTCTCCACAATTGTTGGTGTA 60.022 41.667 8.77 9.08 33.19 2.90
774 775 2.285368 TCCTTCCTCCACGGCCAT 60.285 61.111 2.24 0.00 0.00 4.40
1087 1130 6.827762 GGAATCTTCACATCTTTCTCCTTCAT 59.172 38.462 0.00 0.00 0.00 2.57
1336 1379 3.788227 ATCCAGGTGAAGTACTTGCAA 57.212 42.857 14.14 0.00 35.22 4.08
1397 1440 2.741878 GCTGGCGCCTAAGACAATCTTA 60.742 50.000 29.70 0.17 37.89 2.10
1426 1469 4.536765 AGCCTCTTTGAAACCTTTCTTCA 58.463 39.130 0.00 0.00 38.02 3.02
1463 1506 2.499289 GCTCCATCCTCTCTTTCTGACA 59.501 50.000 0.00 0.00 0.00 3.58
1565 1608 1.073722 CCTCCTCTTGTGCCTTGCA 59.926 57.895 0.00 0.00 35.60 4.08
1613 1657 2.429610 GGCTTTACTGAGTCATACGGGA 59.570 50.000 0.00 0.00 0.00 5.14
1767 1815 1.069022 CACCTTGCAAACATCTCCACG 60.069 52.381 0.00 0.00 0.00 4.94
1846 1894 1.610102 CCCCTCTTCTCAGCACAACAG 60.610 57.143 0.00 0.00 0.00 3.16
1891 1981 2.809299 GCGGTAGGGTGAAAAACAGAGT 60.809 50.000 0.00 0.00 0.00 3.24
1902 1992 4.778143 GCCTGTGGCGGTAGGGTG 62.778 72.222 4.07 0.00 39.62 4.61
1933 2031 0.815734 TCGTCACAGTAGCTTAGCCC 59.184 55.000 0.00 0.00 0.00 5.19
1934 2032 1.743958 TCTCGTCACAGTAGCTTAGCC 59.256 52.381 0.00 0.00 0.00 3.93
1935 2033 3.489180 TTCTCGTCACAGTAGCTTAGC 57.511 47.619 0.00 0.00 0.00 3.09
1936 2034 5.690409 TGTTTTTCTCGTCACAGTAGCTTAG 59.310 40.000 0.00 0.00 0.00 2.18
1937 2035 5.593968 TGTTTTTCTCGTCACAGTAGCTTA 58.406 37.500 0.00 0.00 0.00 3.09
1938 2036 4.439057 TGTTTTTCTCGTCACAGTAGCTT 58.561 39.130 0.00 0.00 0.00 3.74
1939 2037 4.054780 TGTTTTTCTCGTCACAGTAGCT 57.945 40.909 0.00 0.00 0.00 3.32
1940 2038 4.506654 TCTTGTTTTTCTCGTCACAGTAGC 59.493 41.667 0.00 0.00 0.00 3.58
1943 2041 4.094442 GGTTCTTGTTTTTCTCGTCACAGT 59.906 41.667 0.00 0.00 0.00 3.55
1953 2051 2.469826 CCGCCAAGGTTCTTGTTTTTC 58.530 47.619 6.86 0.00 34.51 2.29
1954 2052 2.595124 CCGCCAAGGTTCTTGTTTTT 57.405 45.000 6.86 0.00 34.51 1.94
1978 2076 0.767060 CTATGGTGGTAGGGTCCCCC 60.767 65.000 3.51 0.00 45.90 5.40
1979 2077 1.416480 GCTATGGTGGTAGGGTCCCC 61.416 65.000 3.51 0.00 0.00 4.81
1980 2078 1.416480 GGCTATGGTGGTAGGGTCCC 61.416 65.000 0.00 0.00 0.00 4.46
1981 2079 0.400093 AGGCTATGGTGGTAGGGTCC 60.400 60.000 0.00 0.00 0.00 4.46
1982 2080 1.049402 GAGGCTATGGTGGTAGGGTC 58.951 60.000 0.00 0.00 0.00 4.46
1998 2096 2.125106 GCAACCTACCGCCAGAGG 60.125 66.667 0.00 0.00 38.92 3.69
2000 2098 2.662596 CTGCAACCTACCGCCAGA 59.337 61.111 0.00 0.00 0.00 3.86
2012 2110 1.971505 CTGGCGGTAGGATCCTGCAA 61.972 60.000 28.38 14.80 0.00 4.08
2016 2114 2.122813 CCCTGGCGGTAGGATCCT 60.123 66.667 20.48 20.48 40.42 3.24
2020 2118 3.326385 ATGGTCCCTGGCGGTAGGA 62.326 63.158 2.18 0.00 40.42 2.94
2050 2148 4.342862 TCTCATCACAATAGCTTAGCCC 57.657 45.455 0.00 0.00 0.00 5.19
2052 2150 8.400947 TCATTTTTCTCATCACAATAGCTTAGC 58.599 33.333 0.00 0.00 0.00 3.09
2054 2152 9.453572 ACTCATTTTTCTCATCACAATAGCTTA 57.546 29.630 0.00 0.00 0.00 3.09
2057 2155 6.471519 GCACTCATTTTTCTCATCACAATAGC 59.528 38.462 0.00 0.00 0.00 2.97
2060 2158 5.337009 GGGCACTCATTTTTCTCATCACAAT 60.337 40.000 0.00 0.00 0.00 2.71
2061 2159 4.022068 GGGCACTCATTTTTCTCATCACAA 60.022 41.667 0.00 0.00 0.00 3.33
2065 2163 3.129988 CCAGGGCACTCATTTTTCTCATC 59.870 47.826 0.00 0.00 0.00 2.92
2067 2165 2.517959 CCAGGGCACTCATTTTTCTCA 58.482 47.619 0.00 0.00 0.00 3.27
2069 2167 1.260544 GCCAGGGCACTCATTTTTCT 58.739 50.000 5.20 0.00 41.49 2.52
2070 2168 0.109132 CGCCAGGGCACTCATTTTTC 60.109 55.000 11.42 0.00 42.06 2.29
2074 2172 2.257409 CTACCGCCAGGGCACTCATT 62.257 60.000 11.42 0.00 43.47 2.57
2076 2174 3.390521 CTACCGCCAGGGCACTCA 61.391 66.667 11.42 0.00 43.47 3.41
2077 2175 4.162690 CCTACCGCCAGGGCACTC 62.163 72.222 11.42 0.00 43.47 3.51
2097 2195 1.463674 CATTTGGCGGTAGGCTTCTT 58.536 50.000 0.00 0.00 44.18 2.52
2098 2196 1.032114 GCATTTGGCGGTAGGCTTCT 61.032 55.000 0.00 0.00 44.18 2.85
2099 2197 1.433471 GCATTTGGCGGTAGGCTTC 59.567 57.895 0.00 0.00 44.18 3.86
2100 2198 3.603365 GCATTTGGCGGTAGGCTT 58.397 55.556 0.00 0.00 44.18 4.35
2113 2211 2.272146 CCCTACCGCCACAGCATT 59.728 61.111 0.00 0.00 39.83 3.56
2114 2212 3.009115 ACCCTACCGCCACAGCAT 61.009 61.111 0.00 0.00 39.83 3.79
2115 2213 3.702048 GACCCTACCGCCACAGCA 61.702 66.667 0.00 0.00 39.83 4.41
2119 2217 2.046604 GGTTGACCCTACCGCCAC 60.047 66.667 0.00 0.00 0.00 5.01
2152 2250 4.981794 AGTTTCTGTGACAAGAAAAACGG 58.018 39.130 10.31 0.00 45.30 4.44
2156 2254 3.951680 GGGGAGTTTCTGTGACAAGAAAA 59.048 43.478 10.31 0.00 45.30 2.29
2194 2294 2.122813 AGGATCCTACCGCCAGGG 60.123 66.667 14.27 0.00 43.47 4.45
2205 2305 1.523938 GCGGTAGGTTGCAGGATCC 60.524 63.158 2.48 2.48 0.00 3.36
2207 2307 2.257409 CTGGCGGTAGGTTGCAGGAT 62.257 60.000 0.00 0.00 0.00 3.24
2211 2311 2.662596 CTCTGGCGGTAGGTTGCA 59.337 61.111 0.00 0.00 0.00 4.08
2226 2326 4.162690 CCCTACCGCCACAGCCTC 62.163 72.222 0.00 0.00 34.57 4.70
2229 2329 2.033602 AAACCCTACCGCCACAGC 59.966 61.111 0.00 0.00 0.00 4.40
2232 2332 1.092348 GATTGAAACCCTACCGCCAC 58.908 55.000 0.00 0.00 0.00 5.01



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.