Multiple sequence alignment - TraesCS5B01G211800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G211800 chr5B 100.000 2832 0 0 1 2832 382534411 382537242 0.000000e+00 5230
1 TraesCS5B01G211800 chr5B 95.257 506 23 1 1859 2364 680364484 680363980 0.000000e+00 800
2 TraesCS5B01G211800 chr5B 90.192 469 34 6 2375 2832 564611026 564610559 4.040000e-168 601
3 TraesCS5B01G211800 chr7A 95.693 2368 87 5 1 2366 674510634 674508280 0.000000e+00 3794
4 TraesCS5B01G211800 chr7A 90.189 846 69 9 1533 2370 123048939 123048100 0.000000e+00 1090
5 TraesCS5B01G211800 chr5A 95.276 2371 88 9 1 2364 676352780 676355133 0.000000e+00 3736
6 TraesCS5B01G211800 chr5A 91.702 470 38 1 1 470 656938738 656938270 0.000000e+00 651
7 TraesCS5B01G211800 chr6B 95.051 2364 102 9 1 2363 118025265 118027614 0.000000e+00 3703
8 TraesCS5B01G211800 chr6B 94.821 1564 60 9 807 2366 708220742 708222288 0.000000e+00 2420
9 TraesCS5B01G211800 chr6B 92.453 477 28 3 2364 2832 295426518 295426042 0.000000e+00 675
10 TraesCS5B01G211800 chr6B 91.423 478 32 6 2364 2832 295343703 295343226 0.000000e+00 647
11 TraesCS5B01G211800 chr6B 91.213 478 33 5 2364 2832 354876702 354877179 2.380000e-180 641
12 TraesCS5B01G211800 chr6B 96.825 315 10 0 1 315 671128883 671129197 6.950000e-146 527
13 TraesCS5B01G211800 chr4A 95.320 2265 89 10 1 2249 690355875 690358138 0.000000e+00 3579
14 TraesCS5B01G211800 chr7D 92.562 2393 134 11 1 2363 58619802 58622180 0.000000e+00 3393
15 TraesCS5B01G211800 chr7D 90.153 1828 153 14 558 2370 118903580 118901765 0.000000e+00 2353
16 TraesCS5B01G211800 chr2D 95.121 1947 67 8 434 2366 518249537 518251469 0.000000e+00 3044
17 TraesCS5B01G211800 chr2D 94.533 439 24 0 1 439 518215271 518215709 0.000000e+00 678
18 TraesCS5B01G211800 chr3B 96.188 1600 51 3 773 2363 283638629 283640227 0.000000e+00 2608
19 TraesCS5B01G211800 chrUn 95.189 769 34 2 1 769 50576936 50577701 0.000000e+00 1212
20 TraesCS5B01G211800 chr3A 92.297 740 48 6 177 914 561399091 561399823 0.000000e+00 1042
21 TraesCS5B01G211800 chr2B 91.841 478 30 5 2364 2832 298452082 298452559 0.000000e+00 658
22 TraesCS5B01G211800 chr2B 92.026 464 31 5 2364 2822 588503854 588504316 0.000000e+00 647
23 TraesCS5B01G211800 chr4B 92.411 448 33 1 2377 2824 616893076 616892630 3.080000e-179 638
24 TraesCS5B01G211800 chr4B 90.792 467 35 3 2364 2822 305280198 305280664 4.010000e-173 617
25 TraesCS5B01G211800 chr4B 90.364 467 36 4 2364 2822 305203848 305204313 3.120000e-169 604


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G211800 chr5B 382534411 382537242 2831 False 5230 5230 100.000 1 2832 1 chr5B.!!$F1 2831
1 TraesCS5B01G211800 chr5B 680363980 680364484 504 True 800 800 95.257 1859 2364 1 chr5B.!!$R2 505
2 TraesCS5B01G211800 chr7A 674508280 674510634 2354 True 3794 3794 95.693 1 2366 1 chr7A.!!$R2 2365
3 TraesCS5B01G211800 chr7A 123048100 123048939 839 True 1090 1090 90.189 1533 2370 1 chr7A.!!$R1 837
4 TraesCS5B01G211800 chr5A 676352780 676355133 2353 False 3736 3736 95.276 1 2364 1 chr5A.!!$F1 2363
5 TraesCS5B01G211800 chr6B 118025265 118027614 2349 False 3703 3703 95.051 1 2363 1 chr6B.!!$F1 2362
6 TraesCS5B01G211800 chr6B 708220742 708222288 1546 False 2420 2420 94.821 807 2366 1 chr6B.!!$F4 1559
7 TraesCS5B01G211800 chr4A 690355875 690358138 2263 False 3579 3579 95.320 1 2249 1 chr4A.!!$F1 2248
8 TraesCS5B01G211800 chr7D 58619802 58622180 2378 False 3393 3393 92.562 1 2363 1 chr7D.!!$F1 2362
9 TraesCS5B01G211800 chr7D 118901765 118903580 1815 True 2353 2353 90.153 558 2370 1 chr7D.!!$R1 1812
10 TraesCS5B01G211800 chr2D 518249537 518251469 1932 False 3044 3044 95.121 434 2366 1 chr2D.!!$F2 1932
11 TraesCS5B01G211800 chr3B 283638629 283640227 1598 False 2608 2608 96.188 773 2363 1 chr3B.!!$F1 1590
12 TraesCS5B01G211800 chrUn 50576936 50577701 765 False 1212 1212 95.189 1 769 1 chrUn.!!$F1 768
13 TraesCS5B01G211800 chr3A 561399091 561399823 732 False 1042 1042 92.297 177 914 1 chr3A.!!$F1 737

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
362 363 2.512885 CATGCTCGTGCTTGAAATGTC 58.487 47.619 17.53 0.0 44.17 3.06 F
1263 1277 1.358787 AGTGGCTTTGGATGGGATTGA 59.641 47.619 0.00 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1576 1599 0.179048 TGCACAAGATAGCATCCCCG 60.179 55.0 0.0 0.0 35.51 5.73 R
2713 2776 0.104855 TCCGACTGAGCATGGCATAC 59.895 55.0 0.0 0.0 0.00 2.39 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.708861 AGGTGTGGTTGACTGGAACATA 59.291 45.455 0.00 0.00 38.20 2.29
55 56 3.773119 TCTATGTTCTACCTGGTTGGGAC 59.227 47.826 3.84 4.32 41.11 4.46
104 105 7.658982 TGCTAAAAGATGCTATGAGAATCGATT 59.341 33.333 11.20 11.20 35.34 3.34
270 271 7.443302 TTTCTATCTCCATTCAGATCCACTT 57.557 36.000 0.00 0.00 34.75 3.16
362 363 2.512885 CATGCTCGTGCTTGAAATGTC 58.487 47.619 17.53 0.00 44.17 3.06
438 439 7.067496 TGTTCTTTCTTTGACATAGAGGACT 57.933 36.000 0.00 0.00 0.00 3.85
495 496 4.338879 CCATCCTGTGTTCCTTCTTTGAT 58.661 43.478 0.00 0.00 0.00 2.57
533 534 6.676237 TTGCAGATTCGTCTTATTAATGCA 57.324 33.333 0.00 0.00 39.20 3.96
579 580 3.524826 AGGGATAGGCAGCATATGAGAA 58.475 45.455 3.81 0.00 0.00 2.87
698 699 2.902486 TGCATGGTCCAATTTTAGGCAA 59.098 40.909 0.00 0.00 0.00 4.52
706 707 5.762711 GGTCCAATTTTAGGCAACAATTTGT 59.237 36.000 0.00 0.00 41.41 2.83
1049 1063 3.205282 TGGACTCCTGAGATGGACATAGA 59.795 47.826 0.22 0.00 31.94 1.98
1205 1219 8.928733 CATAACAGGAAGAATCAAAACATTTGG 58.071 33.333 3.25 0.00 0.00 3.28
1263 1277 1.358787 AGTGGCTTTGGATGGGATTGA 59.641 47.619 0.00 0.00 0.00 2.57
1444 1467 2.084546 GTAGTGCACAATTGGGAGTCC 58.915 52.381 21.04 0.00 0.00 3.85
1576 1599 1.294659 CTCAGAAGAGGCAACGCACC 61.295 60.000 0.00 0.00 46.39 5.01
1647 1670 2.360844 TGTTTTGAAGACAACCGAGCA 58.639 42.857 0.00 0.00 35.63 4.26
1657 1680 3.767673 AGACAACCGAGCAACTTCCTATA 59.232 43.478 0.00 0.00 0.00 1.31
1792 1815 1.903877 AAGCACTCATGGCGCTACCT 61.904 55.000 7.64 0.00 40.22 3.08
1827 1850 1.180029 CCATGGCTCTTGACCTTTGG 58.820 55.000 0.00 0.00 0.00 3.28
2043 2068 7.865889 CCTTTTTCCATATTTATTTCTACCCGC 59.134 37.037 0.00 0.00 0.00 6.13
2226 2289 5.186409 ACAGCAATTGGAATTGAGTGCTATT 59.814 36.000 14.89 0.00 46.72 1.73
2370 2433 4.037446 ACATCCAAACACAGCGTAACAATT 59.963 37.500 0.00 0.00 0.00 2.32
2371 2434 3.958704 TCCAAACACAGCGTAACAATTG 58.041 40.909 3.24 3.24 0.00 2.32
2372 2435 3.378742 TCCAAACACAGCGTAACAATTGT 59.621 39.130 4.92 4.92 0.00 2.71
2373 2436 3.728718 CCAAACACAGCGTAACAATTGTC 59.271 43.478 12.39 0.00 0.00 3.18
2374 2437 4.497340 CCAAACACAGCGTAACAATTGTCT 60.497 41.667 12.39 1.27 0.00 3.41
2375 2438 3.878086 ACACAGCGTAACAATTGTCTG 57.122 42.857 18.52 18.52 0.00 3.51
2376 2439 3.202906 ACACAGCGTAACAATTGTCTGT 58.797 40.909 19.56 19.56 35.42 3.41
2377 2440 3.625764 ACACAGCGTAACAATTGTCTGTT 59.374 39.130 21.65 13.55 42.20 3.16
2378 2441 4.095782 ACACAGCGTAACAATTGTCTGTTT 59.904 37.500 21.65 15.71 40.08 2.83
2379 2442 4.437495 CACAGCGTAACAATTGTCTGTTTG 59.563 41.667 21.65 15.45 40.08 2.93
2380 2443 4.095782 ACAGCGTAACAATTGTCTGTTTGT 59.904 37.500 19.56 14.90 40.08 2.83
2381 2444 5.034152 CAGCGTAACAATTGTCTGTTTGTT 58.966 37.500 12.39 6.33 45.36 2.83
2382 2445 5.514914 CAGCGTAACAATTGTCTGTTTGTTT 59.485 36.000 12.39 0.00 41.90 2.83
2383 2446 6.034470 CAGCGTAACAATTGTCTGTTTGTTTT 59.966 34.615 12.39 0.00 41.90 2.43
2384 2447 6.034470 AGCGTAACAATTGTCTGTTTGTTTTG 59.966 34.615 12.39 2.14 41.90 2.44
2385 2448 6.175087 CGTAACAATTGTCTGTTTGTTTTGC 58.825 36.000 12.39 0.00 41.90 3.68
2386 2449 6.034470 CGTAACAATTGTCTGTTTGTTTTGCT 59.966 34.615 12.39 0.00 41.90 3.91
2387 2450 7.219154 CGTAACAATTGTCTGTTTGTTTTGCTA 59.781 33.333 12.39 0.00 41.90 3.49
2388 2451 6.885735 ACAATTGTCTGTTTGTTTTGCTAC 57.114 33.333 4.92 0.00 32.28 3.58
2389 2452 6.630071 ACAATTGTCTGTTTGTTTTGCTACT 58.370 32.000 4.92 0.00 32.28 2.57
2390 2453 6.531240 ACAATTGTCTGTTTGTTTTGCTACTG 59.469 34.615 4.92 0.00 32.28 2.74
2391 2454 4.027572 TGTCTGTTTGTTTTGCTACTGC 57.972 40.909 0.00 0.00 40.20 4.40
2392 2455 3.694072 TGTCTGTTTGTTTTGCTACTGCT 59.306 39.130 0.00 0.00 40.48 4.24
2393 2456 4.878971 TGTCTGTTTGTTTTGCTACTGCTA 59.121 37.500 0.00 0.00 40.48 3.49
2394 2457 5.530915 TGTCTGTTTGTTTTGCTACTGCTAT 59.469 36.000 0.00 0.00 40.48 2.97
2395 2458 6.039270 TGTCTGTTTGTTTTGCTACTGCTATT 59.961 34.615 0.00 0.00 40.48 1.73
2396 2459 6.360681 GTCTGTTTGTTTTGCTACTGCTATTG 59.639 38.462 0.00 0.00 40.48 1.90
2397 2460 6.039270 TCTGTTTGTTTTGCTACTGCTATTGT 59.961 34.615 0.00 0.00 40.48 2.71
2398 2461 6.568869 TGTTTGTTTTGCTACTGCTATTGTT 58.431 32.000 0.00 0.00 40.48 2.83
2399 2462 7.708051 TGTTTGTTTTGCTACTGCTATTGTTA 58.292 30.769 0.00 0.00 40.48 2.41
2400 2463 8.356657 TGTTTGTTTTGCTACTGCTATTGTTAT 58.643 29.630 0.00 0.00 40.48 1.89
2401 2464 9.191995 GTTTGTTTTGCTACTGCTATTGTTATT 57.808 29.630 0.00 0.00 40.48 1.40
2402 2465 9.757227 TTTGTTTTGCTACTGCTATTGTTATTT 57.243 25.926 0.00 0.00 40.48 1.40
2403 2466 8.964420 TGTTTTGCTACTGCTATTGTTATTTC 57.036 30.769 0.00 0.00 40.48 2.17
2404 2467 7.748683 TGTTTTGCTACTGCTATTGTTATTTCG 59.251 33.333 0.00 0.00 40.48 3.46
2405 2468 5.984233 TGCTACTGCTATTGTTATTTCGG 57.016 39.130 0.00 0.00 40.48 4.30
2406 2469 5.424757 TGCTACTGCTATTGTTATTTCGGT 58.575 37.500 0.00 0.00 40.48 4.69
2407 2470 5.878116 TGCTACTGCTATTGTTATTTCGGTT 59.122 36.000 0.00 0.00 40.48 4.44
2408 2471 7.042950 TGCTACTGCTATTGTTATTTCGGTTA 58.957 34.615 0.00 0.00 40.48 2.85
2409 2472 7.713507 TGCTACTGCTATTGTTATTTCGGTTAT 59.286 33.333 0.00 0.00 40.48 1.89
2410 2473 8.009974 GCTACTGCTATTGTTATTTCGGTTATG 58.990 37.037 0.00 0.00 36.03 1.90
2411 2474 6.725246 ACTGCTATTGTTATTTCGGTTATGC 58.275 36.000 0.00 0.00 0.00 3.14
2412 2475 6.542370 ACTGCTATTGTTATTTCGGTTATGCT 59.458 34.615 0.00 0.00 0.00 3.79
2413 2476 7.067008 ACTGCTATTGTTATTTCGGTTATGCTT 59.933 33.333 0.00 0.00 0.00 3.91
2414 2477 8.439993 TGCTATTGTTATTTCGGTTATGCTTA 57.560 30.769 0.00 0.00 0.00 3.09
2415 2478 9.062524 TGCTATTGTTATTTCGGTTATGCTTAT 57.937 29.630 0.00 0.00 0.00 1.73
2416 2479 9.329913 GCTATTGTTATTTCGGTTATGCTTATG 57.670 33.333 0.00 0.00 0.00 1.90
2417 2480 9.825972 CTATTGTTATTTCGGTTATGCTTATGG 57.174 33.333 0.00 0.00 0.00 2.74
2418 2481 7.867305 TTGTTATTTCGGTTATGCTTATGGA 57.133 32.000 0.00 0.00 0.00 3.41
2419 2482 8.458573 TTGTTATTTCGGTTATGCTTATGGAT 57.541 30.769 0.00 0.00 0.00 3.41
2420 2483 8.094798 TGTTATTTCGGTTATGCTTATGGATC 57.905 34.615 0.00 0.00 0.00 3.36
2421 2484 5.862924 ATTTCGGTTATGCTTATGGATCG 57.137 39.130 0.00 0.00 0.00 3.69
2422 2485 3.313012 TCGGTTATGCTTATGGATCGG 57.687 47.619 0.00 0.00 0.00 4.18
2423 2486 2.631062 TCGGTTATGCTTATGGATCGGT 59.369 45.455 0.00 0.00 0.00 4.69
2424 2487 2.736721 CGGTTATGCTTATGGATCGGTG 59.263 50.000 0.00 0.00 0.00 4.94
2425 2488 3.074412 GGTTATGCTTATGGATCGGTGG 58.926 50.000 0.00 0.00 0.00 4.61
2426 2489 3.496160 GGTTATGCTTATGGATCGGTGGT 60.496 47.826 0.00 0.00 0.00 4.16
2427 2490 4.134563 GTTATGCTTATGGATCGGTGGTT 58.865 43.478 0.00 0.00 0.00 3.67
2428 2491 5.302360 GTTATGCTTATGGATCGGTGGTTA 58.698 41.667 0.00 0.00 0.00 2.85
2429 2492 3.188159 TGCTTATGGATCGGTGGTTAC 57.812 47.619 0.00 0.00 0.00 2.50
2430 2493 2.158871 TGCTTATGGATCGGTGGTTACC 60.159 50.000 0.00 0.00 43.89 2.85
2440 2503 2.614829 GGTGGTTACCGTCATGCTAT 57.385 50.000 0.00 0.00 37.19 2.97
2441 2504 2.210116 GGTGGTTACCGTCATGCTATG 58.790 52.381 0.00 0.00 37.19 2.23
2442 2505 2.419574 GGTGGTTACCGTCATGCTATGT 60.420 50.000 0.00 0.00 37.19 2.29
2443 2506 3.267483 GTGGTTACCGTCATGCTATGTT 58.733 45.455 0.00 0.00 0.00 2.71
2444 2507 3.687698 GTGGTTACCGTCATGCTATGTTT 59.312 43.478 0.00 0.00 0.00 2.83
2445 2508 4.155280 GTGGTTACCGTCATGCTATGTTTT 59.845 41.667 0.00 0.00 0.00 2.43
2446 2509 4.393680 TGGTTACCGTCATGCTATGTTTTC 59.606 41.667 0.00 0.00 0.00 2.29
2447 2510 4.634443 GGTTACCGTCATGCTATGTTTTCT 59.366 41.667 0.00 0.00 0.00 2.52
2448 2511 5.123344 GGTTACCGTCATGCTATGTTTTCTT 59.877 40.000 0.00 0.00 0.00 2.52
2449 2512 4.685169 ACCGTCATGCTATGTTTTCTTG 57.315 40.909 0.00 0.00 0.00 3.02
2450 2513 3.119849 ACCGTCATGCTATGTTTTCTTGC 60.120 43.478 0.00 0.00 0.00 4.01
2451 2514 3.119884 CCGTCATGCTATGTTTTCTTGCA 60.120 43.478 0.00 0.00 38.05 4.08
2452 2515 3.848019 CGTCATGCTATGTTTTCTTGCAC 59.152 43.478 0.00 0.00 36.44 4.57
2453 2516 4.378770 CGTCATGCTATGTTTTCTTGCACT 60.379 41.667 0.00 0.00 36.44 4.40
2454 2517 5.091431 GTCATGCTATGTTTTCTTGCACTC 58.909 41.667 0.00 0.00 36.44 3.51
2455 2518 3.811722 TGCTATGTTTTCTTGCACTCG 57.188 42.857 0.00 0.00 0.00 4.18
2456 2519 2.483877 TGCTATGTTTTCTTGCACTCGG 59.516 45.455 0.00 0.00 0.00 4.63
2457 2520 2.484264 GCTATGTTTTCTTGCACTCGGT 59.516 45.455 0.00 0.00 0.00 4.69
2458 2521 3.058224 GCTATGTTTTCTTGCACTCGGTT 60.058 43.478 0.00 0.00 0.00 4.44
2459 2522 4.153475 GCTATGTTTTCTTGCACTCGGTTA 59.847 41.667 0.00 0.00 0.00 2.85
2460 2523 5.163754 GCTATGTTTTCTTGCACTCGGTTAT 60.164 40.000 0.00 0.00 0.00 1.89
2461 2524 4.742438 TGTTTTCTTGCACTCGGTTATC 57.258 40.909 0.00 0.00 0.00 1.75
2462 2525 4.130857 TGTTTTCTTGCACTCGGTTATCA 58.869 39.130 0.00 0.00 0.00 2.15
2463 2526 4.759693 TGTTTTCTTGCACTCGGTTATCAT 59.240 37.500 0.00 0.00 0.00 2.45
2464 2527 4.944962 TTTCTTGCACTCGGTTATCATG 57.055 40.909 0.00 0.00 0.00 3.07
2465 2528 3.885724 TCTTGCACTCGGTTATCATGA 57.114 42.857 0.00 0.00 0.00 3.07
2466 2529 4.406648 TCTTGCACTCGGTTATCATGAT 57.593 40.909 13.81 13.81 0.00 2.45
2467 2530 4.371786 TCTTGCACTCGGTTATCATGATC 58.628 43.478 12.53 0.00 0.00 2.92
2468 2531 4.100035 TCTTGCACTCGGTTATCATGATCT 59.900 41.667 12.53 0.00 0.00 2.75
2469 2532 5.301805 TCTTGCACTCGGTTATCATGATCTA 59.698 40.000 12.53 0.00 0.00 1.98
2470 2533 4.871513 TGCACTCGGTTATCATGATCTAC 58.128 43.478 12.53 11.47 0.00 2.59
2471 2534 4.584743 TGCACTCGGTTATCATGATCTACT 59.415 41.667 12.53 0.00 0.00 2.57
2472 2535 5.768164 TGCACTCGGTTATCATGATCTACTA 59.232 40.000 12.53 4.38 0.00 1.82
2473 2536 6.072452 TGCACTCGGTTATCATGATCTACTAG 60.072 42.308 12.53 14.13 0.00 2.57
2474 2537 6.318628 CACTCGGTTATCATGATCTACTAGC 58.681 44.000 12.53 0.00 0.00 3.42
2475 2538 6.150307 CACTCGGTTATCATGATCTACTAGCT 59.850 42.308 12.53 0.00 0.00 3.32
2476 2539 7.334671 CACTCGGTTATCATGATCTACTAGCTA 59.665 40.741 12.53 0.00 0.00 3.32
2477 2540 7.551262 ACTCGGTTATCATGATCTACTAGCTAG 59.449 40.741 19.44 19.44 0.00 3.42
2478 2541 7.395617 TCGGTTATCATGATCTACTAGCTAGT 58.604 38.462 28.50 28.50 40.24 2.57
2479 2542 8.537858 TCGGTTATCATGATCTACTAGCTAGTA 58.462 37.037 27.73 27.73 37.73 1.82
2480 2543 9.332502 CGGTTATCATGATCTACTAGCTAGTAT 57.667 37.037 29.24 19.27 38.06 2.12
2503 2566 9.173939 GTATTACTTTCATATGTTCATGCTTGC 57.826 33.333 1.90 0.00 0.00 4.01
2504 2567 5.909621 ACTTTCATATGTTCATGCTTGCT 57.090 34.783 1.90 0.00 0.00 3.91
2505 2568 8.504812 TTACTTTCATATGTTCATGCTTGCTA 57.495 30.769 1.90 0.00 0.00 3.49
2506 2569 7.024340 ACTTTCATATGTTCATGCTTGCTAG 57.976 36.000 1.90 0.00 0.00 3.42
2507 2570 6.600822 ACTTTCATATGTTCATGCTTGCTAGT 59.399 34.615 1.90 0.00 0.00 2.57
2508 2571 7.770433 ACTTTCATATGTTCATGCTTGCTAGTA 59.230 33.333 1.90 0.00 0.00 1.82
2509 2572 7.719778 TTCATATGTTCATGCTTGCTAGTAG 57.280 36.000 1.90 0.00 0.00 2.57
2510 2573 6.820335 TCATATGTTCATGCTTGCTAGTAGT 58.180 36.000 1.90 0.00 0.00 2.73
2511 2574 7.275183 TCATATGTTCATGCTTGCTAGTAGTT 58.725 34.615 1.90 0.00 0.00 2.24
2512 2575 7.439356 TCATATGTTCATGCTTGCTAGTAGTTC 59.561 37.037 1.90 0.00 0.00 3.01
2513 2576 4.893608 TGTTCATGCTTGCTAGTAGTTCA 58.106 39.130 0.00 0.00 0.00 3.18
2514 2577 5.491070 TGTTCATGCTTGCTAGTAGTTCAT 58.509 37.500 0.00 0.00 0.00 2.57
2515 2578 5.352293 TGTTCATGCTTGCTAGTAGTTCATG 59.648 40.000 0.00 7.61 33.24 3.07
2516 2579 5.089970 TCATGCTTGCTAGTAGTTCATGT 57.910 39.130 13.99 0.00 33.58 3.21
2517 2580 5.491070 TCATGCTTGCTAGTAGTTCATGTT 58.509 37.500 13.99 0.00 33.58 2.71
2518 2581 5.352293 TCATGCTTGCTAGTAGTTCATGTTG 59.648 40.000 13.99 0.00 33.58 3.33
2519 2582 4.002982 TGCTTGCTAGTAGTTCATGTTGG 58.997 43.478 0.00 0.00 0.00 3.77
2520 2583 4.003648 GCTTGCTAGTAGTTCATGTTGGT 58.996 43.478 0.00 0.00 0.00 3.67
2521 2584 4.142816 GCTTGCTAGTAGTTCATGTTGGTG 60.143 45.833 0.00 0.00 0.00 4.17
2522 2585 4.617253 TGCTAGTAGTTCATGTTGGTGT 57.383 40.909 0.00 0.00 0.00 4.16
2523 2586 4.968259 TGCTAGTAGTTCATGTTGGTGTT 58.032 39.130 0.00 0.00 0.00 3.32
2524 2587 4.754618 TGCTAGTAGTTCATGTTGGTGTTG 59.245 41.667 0.00 0.00 0.00 3.33
2525 2588 4.154195 GCTAGTAGTTCATGTTGGTGTTGG 59.846 45.833 0.00 0.00 0.00 3.77
2526 2589 4.164843 AGTAGTTCATGTTGGTGTTGGT 57.835 40.909 0.00 0.00 0.00 3.67
2527 2590 4.532834 AGTAGTTCATGTTGGTGTTGGTT 58.467 39.130 0.00 0.00 0.00 3.67
2528 2591 5.686753 AGTAGTTCATGTTGGTGTTGGTTA 58.313 37.500 0.00 0.00 0.00 2.85
2529 2592 6.303839 AGTAGTTCATGTTGGTGTTGGTTAT 58.696 36.000 0.00 0.00 0.00 1.89
2530 2593 5.452078 AGTTCATGTTGGTGTTGGTTATG 57.548 39.130 0.00 0.00 0.00 1.90
2531 2594 4.892934 AGTTCATGTTGGTGTTGGTTATGT 59.107 37.500 0.00 0.00 0.00 2.29
2532 2595 5.362430 AGTTCATGTTGGTGTTGGTTATGTT 59.638 36.000 0.00 0.00 0.00 2.71
2533 2596 5.446143 TCATGTTGGTGTTGGTTATGTTC 57.554 39.130 0.00 0.00 0.00 3.18
2534 2597 5.136828 TCATGTTGGTGTTGGTTATGTTCT 58.863 37.500 0.00 0.00 0.00 3.01
2535 2598 5.596361 TCATGTTGGTGTTGGTTATGTTCTT 59.404 36.000 0.00 0.00 0.00 2.52
2536 2599 5.923733 TGTTGGTGTTGGTTATGTTCTTT 57.076 34.783 0.00 0.00 0.00 2.52
2537 2600 5.655488 TGTTGGTGTTGGTTATGTTCTTTG 58.345 37.500 0.00 0.00 0.00 2.77
2538 2601 4.927978 TGGTGTTGGTTATGTTCTTTGG 57.072 40.909 0.00 0.00 0.00 3.28
2539 2602 4.282496 TGGTGTTGGTTATGTTCTTTGGT 58.718 39.130 0.00 0.00 0.00 3.67
2540 2603 4.098654 TGGTGTTGGTTATGTTCTTTGGTG 59.901 41.667 0.00 0.00 0.00 4.17
2541 2604 4.048504 GTGTTGGTTATGTTCTTTGGTGC 58.951 43.478 0.00 0.00 0.00 5.01
2542 2605 3.701542 TGTTGGTTATGTTCTTTGGTGCA 59.298 39.130 0.00 0.00 0.00 4.57
2543 2606 4.343526 TGTTGGTTATGTTCTTTGGTGCAT 59.656 37.500 0.00 0.00 0.00 3.96
2544 2607 4.517952 TGGTTATGTTCTTTGGTGCATG 57.482 40.909 0.00 0.00 0.00 4.06
2545 2608 4.148079 TGGTTATGTTCTTTGGTGCATGA 58.852 39.130 0.00 0.00 0.00 3.07
2546 2609 4.022416 TGGTTATGTTCTTTGGTGCATGAC 60.022 41.667 0.00 0.00 0.00 3.06
2547 2610 4.218417 GGTTATGTTCTTTGGTGCATGACT 59.782 41.667 0.00 0.00 31.36 3.41
2548 2611 5.414454 GGTTATGTTCTTTGGTGCATGACTA 59.586 40.000 0.00 0.00 31.36 2.59
2549 2612 6.095440 GGTTATGTTCTTTGGTGCATGACTAT 59.905 38.462 0.00 0.00 31.36 2.12
2550 2613 5.824904 ATGTTCTTTGGTGCATGACTATC 57.175 39.130 0.00 0.00 0.00 2.08
2551 2614 3.684305 TGTTCTTTGGTGCATGACTATCG 59.316 43.478 0.00 0.00 0.00 2.92
2552 2615 3.610040 TCTTTGGTGCATGACTATCGT 57.390 42.857 0.00 0.00 0.00 3.73
2553 2616 3.521560 TCTTTGGTGCATGACTATCGTC 58.478 45.455 0.00 0.00 40.64 4.20
2554 2617 3.195610 TCTTTGGTGCATGACTATCGTCT 59.804 43.478 0.00 0.00 40.86 4.18
2555 2618 4.401202 TCTTTGGTGCATGACTATCGTCTA 59.599 41.667 0.00 0.00 40.86 2.59
2556 2619 4.937201 TTGGTGCATGACTATCGTCTAT 57.063 40.909 0.00 0.00 40.86 1.98
2557 2620 4.937201 TGGTGCATGACTATCGTCTATT 57.063 40.909 0.00 0.00 40.86 1.73
2558 2621 6.399639 TTGGTGCATGACTATCGTCTATTA 57.600 37.500 0.00 0.00 40.86 0.98
2559 2622 5.769367 TGGTGCATGACTATCGTCTATTAC 58.231 41.667 0.00 0.00 40.86 1.89
2560 2623 5.162075 GGTGCATGACTATCGTCTATTACC 58.838 45.833 0.00 0.10 40.86 2.85
2561 2624 4.852104 GTGCATGACTATCGTCTATTACCG 59.148 45.833 0.00 0.00 40.86 4.02
2562 2625 4.758165 TGCATGACTATCGTCTATTACCGA 59.242 41.667 0.00 0.00 40.86 4.69
2563 2626 5.106673 TGCATGACTATCGTCTATTACCGAG 60.107 44.000 0.00 0.00 40.86 4.63
2564 2627 5.106634 GCATGACTATCGTCTATTACCGAGT 60.107 44.000 0.00 0.00 40.86 4.18
2565 2628 6.091849 GCATGACTATCGTCTATTACCGAGTA 59.908 42.308 0.00 0.00 40.86 2.59
2566 2629 7.454642 CATGACTATCGTCTATTACCGAGTAC 58.545 42.308 0.00 0.00 40.86 2.73
2567 2630 5.928839 TGACTATCGTCTATTACCGAGTACC 59.071 44.000 0.00 0.00 40.86 3.34
2568 2631 4.926238 ACTATCGTCTATTACCGAGTACCG 59.074 45.833 0.00 0.00 36.41 4.02
2569 2632 3.179443 TCGTCTATTACCGAGTACCGT 57.821 47.619 0.00 0.00 36.31 4.83
2570 2633 3.531538 TCGTCTATTACCGAGTACCGTT 58.468 45.455 0.00 0.00 36.31 4.44
2571 2634 3.309682 TCGTCTATTACCGAGTACCGTTG 59.690 47.826 0.00 0.00 36.31 4.10
2572 2635 3.309682 CGTCTATTACCGAGTACCGTTGA 59.690 47.826 0.00 0.00 36.31 3.18
2573 2636 4.024556 CGTCTATTACCGAGTACCGTTGAT 60.025 45.833 0.00 0.00 36.31 2.57
2574 2637 5.177511 CGTCTATTACCGAGTACCGTTGATA 59.822 44.000 0.00 0.00 36.31 2.15
2575 2638 6.128445 CGTCTATTACCGAGTACCGTTGATAT 60.128 42.308 0.00 0.00 36.31 1.63
2576 2639 7.020010 GTCTATTACCGAGTACCGTTGATATG 58.980 42.308 0.00 0.00 36.31 1.78
2577 2640 2.503920 ACCGAGTACCGTTGATATGC 57.496 50.000 0.00 0.00 36.31 3.14
2578 2641 1.752498 ACCGAGTACCGTTGATATGCA 59.248 47.619 0.00 0.00 36.31 3.96
2579 2642 2.364324 ACCGAGTACCGTTGATATGCAT 59.636 45.455 3.79 3.79 36.31 3.96
2580 2643 3.570975 ACCGAGTACCGTTGATATGCATA 59.429 43.478 9.27 9.27 36.31 3.14
2581 2644 4.219944 ACCGAGTACCGTTGATATGCATAT 59.780 41.667 19.17 19.17 36.31 1.78
2582 2645 5.168569 CCGAGTACCGTTGATATGCATATT 58.831 41.667 20.00 6.15 36.31 1.28
2583 2646 5.637810 CCGAGTACCGTTGATATGCATATTT 59.362 40.000 20.00 0.00 36.31 1.40
2584 2647 6.183360 CCGAGTACCGTTGATATGCATATTTC 60.183 42.308 20.00 10.20 36.31 2.17
2585 2648 6.452480 CGAGTACCGTTGATATGCATATTTCG 60.452 42.308 20.00 20.73 0.00 3.46
2586 2649 6.220930 AGTACCGTTGATATGCATATTTCGT 58.779 36.000 20.00 13.58 0.00 3.85
2587 2650 6.704493 AGTACCGTTGATATGCATATTTCGTT 59.296 34.615 20.00 14.71 0.00 3.85
2588 2651 5.747565 ACCGTTGATATGCATATTTCGTTG 58.252 37.500 20.00 13.88 0.00 4.10
2589 2652 4.612614 CCGTTGATATGCATATTTCGTTGC 59.387 41.667 20.00 6.52 39.33 4.17
2596 2659 4.472691 TGCATATTTCGTTGCATCTAGC 57.527 40.909 0.00 0.00 43.54 3.42
2597 2660 4.129380 TGCATATTTCGTTGCATCTAGCT 58.871 39.130 0.00 0.00 43.54 3.32
2598 2661 4.024641 TGCATATTTCGTTGCATCTAGCTG 60.025 41.667 0.00 0.00 43.54 4.24
2599 2662 4.612259 GCATATTTCGTTGCATCTAGCTGG 60.612 45.833 0.00 0.00 45.94 4.85
2600 2663 2.472695 TTTCGTTGCATCTAGCTGGT 57.527 45.000 0.00 0.00 45.94 4.00
2601 2664 2.472695 TTCGTTGCATCTAGCTGGTT 57.527 45.000 0.00 0.00 45.94 3.67
2602 2665 2.472695 TCGTTGCATCTAGCTGGTTT 57.527 45.000 0.00 0.00 45.94 3.27
2603 2666 3.603158 TCGTTGCATCTAGCTGGTTTA 57.397 42.857 0.00 0.00 45.94 2.01
2604 2667 4.137116 TCGTTGCATCTAGCTGGTTTAT 57.863 40.909 0.00 0.00 45.94 1.40
2605 2668 3.871006 TCGTTGCATCTAGCTGGTTTATG 59.129 43.478 0.00 0.00 45.94 1.90
2606 2669 3.546815 CGTTGCATCTAGCTGGTTTATGC 60.547 47.826 13.32 13.32 45.94 3.14
2607 2670 3.565764 TGCATCTAGCTGGTTTATGCT 57.434 42.857 18.71 0.00 45.94 3.79
2608 2671 3.470709 TGCATCTAGCTGGTTTATGCTC 58.529 45.455 18.71 0.00 45.94 4.26
2609 2672 3.118298 TGCATCTAGCTGGTTTATGCTCA 60.118 43.478 18.71 2.21 45.94 4.26
2610 2673 3.249559 GCATCTAGCTGGTTTATGCTCAC 59.750 47.826 13.03 0.00 39.80 3.51
2611 2674 3.543680 TCTAGCTGGTTTATGCTCACC 57.456 47.619 0.00 0.00 40.35 4.02
2612 2675 3.107601 TCTAGCTGGTTTATGCTCACCT 58.892 45.455 0.00 0.00 40.35 4.00
2613 2676 2.119801 AGCTGGTTTATGCTCACCTG 57.880 50.000 0.00 0.00 33.90 4.00
2614 2677 1.098050 GCTGGTTTATGCTCACCTGG 58.902 55.000 0.00 0.00 33.64 4.45
2615 2678 1.614317 GCTGGTTTATGCTCACCTGGT 60.614 52.381 0.00 0.00 33.64 4.00
2616 2679 2.355716 GCTGGTTTATGCTCACCTGGTA 60.356 50.000 0.00 0.00 33.64 3.25
2617 2680 3.535561 CTGGTTTATGCTCACCTGGTAG 58.464 50.000 0.00 0.00 33.76 3.18
2618 2681 2.910319 TGGTTTATGCTCACCTGGTAGT 59.090 45.455 0.00 0.00 33.76 2.73
2619 2682 4.098155 TGGTTTATGCTCACCTGGTAGTA 58.902 43.478 0.00 0.00 33.76 1.82
2620 2683 4.719773 TGGTTTATGCTCACCTGGTAGTAT 59.280 41.667 0.00 5.69 33.76 2.12
2621 2684 5.190925 TGGTTTATGCTCACCTGGTAGTATT 59.809 40.000 0.00 0.00 33.76 1.89
2622 2685 5.527582 GGTTTATGCTCACCTGGTAGTATTG 59.472 44.000 0.00 0.00 0.00 1.90
2623 2686 5.950544 TTATGCTCACCTGGTAGTATTGT 57.049 39.130 0.00 0.00 0.00 2.71
2624 2687 3.887621 TGCTCACCTGGTAGTATTGTC 57.112 47.619 0.00 0.00 0.00 3.18
2625 2688 2.165641 TGCTCACCTGGTAGTATTGTCG 59.834 50.000 0.00 0.00 0.00 4.35
2626 2689 2.165845 GCTCACCTGGTAGTATTGTCGT 59.834 50.000 0.00 0.00 0.00 4.34
2627 2690 3.368116 GCTCACCTGGTAGTATTGTCGTT 60.368 47.826 0.00 0.00 0.00 3.85
2628 2691 4.142315 GCTCACCTGGTAGTATTGTCGTTA 60.142 45.833 0.00 0.00 0.00 3.18
2629 2692 5.451520 GCTCACCTGGTAGTATTGTCGTTAT 60.452 44.000 0.00 0.00 0.00 1.89
2630 2693 5.898174 TCACCTGGTAGTATTGTCGTTATG 58.102 41.667 0.00 0.00 0.00 1.90
2631 2694 5.419788 TCACCTGGTAGTATTGTCGTTATGT 59.580 40.000 0.00 0.00 0.00 2.29
2632 2695 6.071221 TCACCTGGTAGTATTGTCGTTATGTT 60.071 38.462 0.00 0.00 0.00 2.71
2633 2696 6.255020 CACCTGGTAGTATTGTCGTTATGTTC 59.745 42.308 0.00 0.00 0.00 3.18
2634 2697 6.154021 ACCTGGTAGTATTGTCGTTATGTTCT 59.846 38.462 0.00 0.00 0.00 3.01
2635 2698 7.039882 CCTGGTAGTATTGTCGTTATGTTCTT 58.960 38.462 0.00 0.00 0.00 2.52
2636 2699 7.010183 CCTGGTAGTATTGTCGTTATGTTCTTG 59.990 40.741 0.00 0.00 0.00 3.02
2637 2700 6.311935 TGGTAGTATTGTCGTTATGTTCTTGC 59.688 38.462 0.00 0.00 0.00 4.01
2638 2701 6.311935 GGTAGTATTGTCGTTATGTTCTTGCA 59.688 38.462 0.00 0.00 0.00 4.08
2639 2702 6.985188 AGTATTGTCGTTATGTTCTTGCAT 57.015 33.333 0.00 0.00 0.00 3.96
2640 2703 6.775088 AGTATTGTCGTTATGTTCTTGCATG 58.225 36.000 0.00 0.00 0.00 4.06
2641 2704 4.418013 TTGTCGTTATGTTCTTGCATGG 57.582 40.909 0.00 0.00 0.00 3.66
2642 2705 3.407698 TGTCGTTATGTTCTTGCATGGT 58.592 40.909 0.00 0.00 0.00 3.55
2643 2706 4.570930 TGTCGTTATGTTCTTGCATGGTA 58.429 39.130 0.00 0.00 0.00 3.25
2644 2707 5.182487 TGTCGTTATGTTCTTGCATGGTAT 58.818 37.500 0.00 0.00 0.00 2.73
2645 2708 5.645929 TGTCGTTATGTTCTTGCATGGTATT 59.354 36.000 0.00 0.00 0.00 1.89
2646 2709 6.150307 TGTCGTTATGTTCTTGCATGGTATTT 59.850 34.615 0.00 0.00 0.00 1.40
2647 2710 7.334671 TGTCGTTATGTTCTTGCATGGTATTTA 59.665 33.333 0.00 0.00 0.00 1.40
2648 2711 8.342634 GTCGTTATGTTCTTGCATGGTATTTAT 58.657 33.333 0.00 0.00 0.00 1.40
2649 2712 8.898761 TCGTTATGTTCTTGCATGGTATTTATT 58.101 29.630 0.00 0.00 0.00 1.40
2650 2713 9.515020 CGTTATGTTCTTGCATGGTATTTATTT 57.485 29.630 0.00 0.00 0.00 1.40
2673 2736 9.881649 ATTTATGATACTAGTGGTCATGCTATG 57.118 33.333 24.54 0.00 34.62 2.23
2674 2737 5.139435 TGATACTAGTGGTCATGCTATGC 57.861 43.478 5.39 0.00 0.00 3.14
2675 2738 4.835056 TGATACTAGTGGTCATGCTATGCT 59.165 41.667 5.39 0.00 0.00 3.79
2676 2739 5.305386 TGATACTAGTGGTCATGCTATGCTT 59.695 40.000 5.39 0.00 0.00 3.91
2677 2740 6.493458 TGATACTAGTGGTCATGCTATGCTTA 59.507 38.462 5.39 0.00 0.00 3.09
2678 2741 5.815233 ACTAGTGGTCATGCTATGCTTAT 57.185 39.130 0.00 0.00 0.00 1.73
2679 2742 5.545588 ACTAGTGGTCATGCTATGCTTATG 58.454 41.667 0.00 0.00 0.00 1.90
2680 2743 4.694760 AGTGGTCATGCTATGCTTATGA 57.305 40.909 0.00 0.00 0.00 2.15
2681 2744 5.238624 AGTGGTCATGCTATGCTTATGAT 57.761 39.130 0.00 0.00 33.82 2.45
2682 2745 6.364568 AGTGGTCATGCTATGCTTATGATA 57.635 37.500 0.00 0.00 33.82 2.15
2683 2746 6.404708 AGTGGTCATGCTATGCTTATGATAG 58.595 40.000 0.00 0.00 33.82 2.08
2684 2747 6.212187 AGTGGTCATGCTATGCTTATGATAGA 59.788 38.462 0.00 0.00 33.82 1.98
2685 2748 6.534436 GTGGTCATGCTATGCTTATGATAGAG 59.466 42.308 0.00 0.00 33.82 2.43
2686 2749 6.212187 TGGTCATGCTATGCTTATGATAGAGT 59.788 38.462 0.00 0.00 33.82 3.24
2687 2750 7.102346 GGTCATGCTATGCTTATGATAGAGTT 58.898 38.462 0.00 0.00 33.82 3.01
2688 2751 8.253810 GGTCATGCTATGCTTATGATAGAGTTA 58.746 37.037 0.00 0.00 33.82 2.24
2689 2752 9.814899 GTCATGCTATGCTTATGATAGAGTTAT 57.185 33.333 0.00 0.00 33.82 1.89
2690 2753 9.813446 TCATGCTATGCTTATGATAGAGTTATG 57.187 33.333 0.00 0.00 0.00 1.90
2691 2754 9.597170 CATGCTATGCTTATGATAGAGTTATGT 57.403 33.333 0.00 0.00 0.00 2.29
2697 2760 9.618890 ATGCTTATGATAGAGTTATGTTTGTGT 57.381 29.630 0.00 0.00 0.00 3.72
2698 2761 9.448438 TGCTTATGATAGAGTTATGTTTGTGTT 57.552 29.630 0.00 0.00 0.00 3.32
2707 2770 8.340618 AGAGTTATGTTTGTGTTATTCATGCT 57.659 30.769 0.00 0.00 0.00 3.79
2708 2771 8.454106 AGAGTTATGTTTGTGTTATTCATGCTC 58.546 33.333 0.00 0.00 0.00 4.26
2709 2772 7.243487 AGTTATGTTTGTGTTATTCATGCTCG 58.757 34.615 0.00 0.00 0.00 5.03
2710 2773 5.627499 ATGTTTGTGTTATTCATGCTCGT 57.373 34.783 0.00 0.00 0.00 4.18
2711 2774 5.029650 TGTTTGTGTTATTCATGCTCGTC 57.970 39.130 0.00 0.00 0.00 4.20
2712 2775 4.513318 TGTTTGTGTTATTCATGCTCGTCA 59.487 37.500 0.00 0.00 0.00 4.35
2713 2776 4.926860 TTGTGTTATTCATGCTCGTCAG 57.073 40.909 0.00 0.00 0.00 3.51
2714 2777 3.925379 TGTGTTATTCATGCTCGTCAGT 58.075 40.909 0.00 0.00 0.00 3.41
2715 2778 5.066968 TGTGTTATTCATGCTCGTCAGTA 57.933 39.130 0.00 0.00 0.00 2.74
2716 2779 5.660460 TGTGTTATTCATGCTCGTCAGTAT 58.340 37.500 0.00 0.00 0.00 2.12
2717 2780 5.519927 TGTGTTATTCATGCTCGTCAGTATG 59.480 40.000 0.00 0.00 42.56 2.39
2718 2781 4.507756 TGTTATTCATGCTCGTCAGTATGC 59.492 41.667 0.00 0.00 41.33 3.14
2719 2782 1.939974 TTCATGCTCGTCAGTATGCC 58.060 50.000 0.00 0.00 41.33 4.40
2720 2783 0.823460 TCATGCTCGTCAGTATGCCA 59.177 50.000 0.00 0.00 41.33 4.92
2721 2784 1.413812 TCATGCTCGTCAGTATGCCAT 59.586 47.619 0.00 0.00 41.33 4.40
2722 2785 1.529865 CATGCTCGTCAGTATGCCATG 59.470 52.381 0.00 0.00 36.13 3.66
2723 2786 0.811219 TGCTCGTCAGTATGCCATGC 60.811 55.000 0.00 0.00 34.76 4.06
2724 2787 0.531532 GCTCGTCAGTATGCCATGCT 60.532 55.000 0.00 0.00 34.76 3.79
2725 2788 1.495878 CTCGTCAGTATGCCATGCTC 58.504 55.000 0.00 0.00 34.76 4.26
2726 2789 0.823460 TCGTCAGTATGCCATGCTCA 59.177 50.000 0.00 0.00 34.76 4.26
2727 2790 1.202452 TCGTCAGTATGCCATGCTCAG 60.202 52.381 0.00 0.00 34.76 3.35
2728 2791 1.472201 CGTCAGTATGCCATGCTCAGT 60.472 52.381 0.00 0.00 34.76 3.41
2729 2792 2.208431 GTCAGTATGCCATGCTCAGTC 58.792 52.381 0.00 0.00 34.76 3.51
2730 2793 1.202452 TCAGTATGCCATGCTCAGTCG 60.202 52.381 0.00 0.00 34.76 4.18
2731 2794 0.105593 AGTATGCCATGCTCAGTCGG 59.894 55.000 0.00 0.00 0.00 4.79
2732 2795 0.104855 GTATGCCATGCTCAGTCGGA 59.895 55.000 0.00 0.00 0.00 4.55
2733 2796 1.051008 TATGCCATGCTCAGTCGGAT 58.949 50.000 0.00 0.00 0.00 4.18
2734 2797 1.051008 ATGCCATGCTCAGTCGGATA 58.949 50.000 0.00 0.00 0.00 2.59
2735 2798 1.051008 TGCCATGCTCAGTCGGATAT 58.949 50.000 0.00 0.00 0.00 1.63
2736 2799 2.247358 TGCCATGCTCAGTCGGATATA 58.753 47.619 0.00 0.00 0.00 0.86
2737 2800 2.833943 TGCCATGCTCAGTCGGATATAT 59.166 45.455 0.00 0.00 0.00 0.86
2738 2801 3.193263 GCCATGCTCAGTCGGATATATG 58.807 50.000 0.00 0.00 0.00 1.78
2739 2802 3.193263 CCATGCTCAGTCGGATATATGC 58.807 50.000 0.00 0.00 0.00 3.14
2740 2803 3.118847 CCATGCTCAGTCGGATATATGCT 60.119 47.826 2.53 0.00 0.00 3.79
2741 2804 4.502016 CATGCTCAGTCGGATATATGCTT 58.498 43.478 2.53 0.00 0.00 3.91
2742 2805 4.179926 TGCTCAGTCGGATATATGCTTC 57.820 45.455 2.53 0.00 0.00 3.86
2743 2806 3.573967 TGCTCAGTCGGATATATGCTTCA 59.426 43.478 2.53 0.00 0.00 3.02
2744 2807 4.221482 TGCTCAGTCGGATATATGCTTCAT 59.779 41.667 2.53 0.00 0.00 2.57
2745 2808 5.174395 GCTCAGTCGGATATATGCTTCATT 58.826 41.667 2.53 0.00 0.00 2.57
2746 2809 5.063186 GCTCAGTCGGATATATGCTTCATTG 59.937 44.000 2.53 0.00 0.00 2.82
2747 2810 6.101650 TCAGTCGGATATATGCTTCATTGT 57.898 37.500 2.53 0.00 0.00 2.71
2748 2811 5.928264 TCAGTCGGATATATGCTTCATTGTG 59.072 40.000 2.53 0.00 0.00 3.33
2749 2812 4.692625 AGTCGGATATATGCTTCATTGTGC 59.307 41.667 2.53 0.00 0.00 4.57
2750 2813 4.692625 GTCGGATATATGCTTCATTGTGCT 59.307 41.667 2.53 0.00 0.00 4.40
2751 2814 5.180117 GTCGGATATATGCTTCATTGTGCTT 59.820 40.000 2.53 3.31 0.00 3.91
2752 2815 6.368791 GTCGGATATATGCTTCATTGTGCTTA 59.631 38.462 2.53 4.95 0.00 3.09
2753 2816 7.065085 GTCGGATATATGCTTCATTGTGCTTAT 59.935 37.037 2.53 12.92 35.03 1.73
2754 2817 7.064966 TCGGATATATGCTTCATTGTGCTTATG 59.935 37.037 2.53 0.00 33.55 1.90
2755 2818 6.971184 GGATATATGCTTCATTGTGCTTATGC 59.029 38.462 15.54 0.00 40.20 3.14
2756 2819 7.148120 GGATATATGCTTCATTGTGCTTATGCT 60.148 37.037 15.54 8.42 40.48 3.79
2757 2820 3.770263 TGCTTCATTGTGCTTATGCTC 57.230 42.857 1.96 0.00 40.48 4.26
2758 2821 2.096335 TGCTTCATTGTGCTTATGCTCG 59.904 45.455 1.96 0.00 40.48 5.03
2759 2822 2.352651 GCTTCATTGTGCTTATGCTCGA 59.647 45.455 1.96 0.00 40.48 4.04
2760 2823 3.003068 GCTTCATTGTGCTTATGCTCGAT 59.997 43.478 1.96 1.27 40.48 3.59
2767 2830 5.851047 TGTGCTTATGCTCGATGATTATG 57.149 39.130 1.96 0.00 40.48 1.90
2768 2831 5.299949 TGTGCTTATGCTCGATGATTATGT 58.700 37.500 1.96 0.00 40.48 2.29
2769 2832 5.759763 TGTGCTTATGCTCGATGATTATGTT 59.240 36.000 1.96 0.00 40.48 2.71
2770 2833 6.075918 GTGCTTATGCTCGATGATTATGTTG 58.924 40.000 1.96 0.00 40.48 3.33
2771 2834 5.084722 GCTTATGCTCGATGATTATGTTGC 58.915 41.667 0.00 0.00 36.03 4.17
2772 2835 5.334337 GCTTATGCTCGATGATTATGTTGCA 60.334 40.000 0.00 0.00 36.03 4.08
2773 2836 3.950087 TGCTCGATGATTATGTTGCAC 57.050 42.857 0.00 0.00 0.00 4.57
2774 2837 2.613595 TGCTCGATGATTATGTTGCACC 59.386 45.455 0.00 0.00 0.00 5.01
2775 2838 2.874701 GCTCGATGATTATGTTGCACCT 59.125 45.455 0.00 0.00 0.00 4.00
2776 2839 3.059325 GCTCGATGATTATGTTGCACCTC 60.059 47.826 0.00 0.00 0.00 3.85
2777 2840 3.466836 TCGATGATTATGTTGCACCTCC 58.533 45.455 0.00 0.00 0.00 4.30
2778 2841 3.118445 TCGATGATTATGTTGCACCTCCA 60.118 43.478 0.00 0.00 0.00 3.86
2779 2842 3.817084 CGATGATTATGTTGCACCTCCAT 59.183 43.478 0.00 0.00 0.00 3.41
2780 2843 4.319984 CGATGATTATGTTGCACCTCCATG 60.320 45.833 0.00 0.00 0.00 3.66
2781 2844 2.689471 TGATTATGTTGCACCTCCATGC 59.311 45.455 0.00 0.00 46.32 4.06
2782 2845 2.512692 TTATGTTGCACCTCCATGCT 57.487 45.000 0.00 0.00 46.28 3.79
2783 2846 2.512692 TATGTTGCACCTCCATGCTT 57.487 45.000 0.00 0.00 46.28 3.91
2784 2847 2.512692 ATGTTGCACCTCCATGCTTA 57.487 45.000 0.00 0.00 46.28 3.09
2785 2848 2.512692 TGTTGCACCTCCATGCTTAT 57.487 45.000 0.00 0.00 46.28 1.73
2786 2849 2.093890 TGTTGCACCTCCATGCTTATG 58.906 47.619 0.00 0.00 46.28 1.90
2787 2850 2.290832 TGTTGCACCTCCATGCTTATGA 60.291 45.455 0.00 0.00 46.28 2.15
2788 2851 2.954318 GTTGCACCTCCATGCTTATGAT 59.046 45.455 0.00 0.00 46.28 2.45
2789 2852 4.136796 GTTGCACCTCCATGCTTATGATA 58.863 43.478 0.00 0.00 46.28 2.15
2790 2853 4.645863 TGCACCTCCATGCTTATGATAT 57.354 40.909 0.00 0.00 46.28 1.63
2791 2854 4.582869 TGCACCTCCATGCTTATGATATC 58.417 43.478 0.00 0.00 46.28 1.63
2792 2855 4.041938 TGCACCTCCATGCTTATGATATCA 59.958 41.667 8.10 8.10 46.28 2.15
2793 2856 5.191426 GCACCTCCATGCTTATGATATCAT 58.809 41.667 21.50 21.50 42.62 2.45
2794 2857 5.066117 GCACCTCCATGCTTATGATATCATG 59.934 44.000 25.44 12.60 42.62 3.07
2795 2858 5.066117 CACCTCCATGCTTATGATATCATGC 59.934 44.000 25.44 20.93 37.15 4.06
2796 2859 5.045066 ACCTCCATGCTTATGATATCATGCT 60.045 40.000 25.44 5.55 37.15 3.79
2797 2860 5.527951 CCTCCATGCTTATGATATCATGCTC 59.472 44.000 25.44 14.69 37.15 4.26
2798 2861 6.057321 TCCATGCTTATGATATCATGCTCA 57.943 37.500 25.44 18.89 37.15 4.26
2799 2862 6.659824 TCCATGCTTATGATATCATGCTCAT 58.340 36.000 25.44 19.99 37.15 2.90
2800 2863 7.798071 TCCATGCTTATGATATCATGCTCATA 58.202 34.615 25.44 8.03 37.15 2.15
2801 2864 8.437575 TCCATGCTTATGATATCATGCTCATAT 58.562 33.333 25.44 9.72 35.04 1.78
2802 2865 9.720769 CCATGCTTATGATATCATGCTCATATA 57.279 33.333 25.44 7.09 35.04 0.86
2813 2876 9.895138 ATATCATGCTCATATAATGTAGTTGCA 57.105 29.630 0.00 0.00 0.00 4.08
2814 2877 8.803397 ATCATGCTCATATAATGTAGTTGCAT 57.197 30.769 0.00 0.00 38.87 3.96
2815 2878 8.260270 TCATGCTCATATAATGTAGTTGCATC 57.740 34.615 0.00 0.00 36.64 3.91
2816 2879 7.879160 TCATGCTCATATAATGTAGTTGCATCA 59.121 33.333 0.00 0.00 36.64 3.07
2817 2880 8.674607 CATGCTCATATAATGTAGTTGCATCAT 58.325 33.333 0.00 0.00 36.64 2.45
2818 2881 8.036273 TGCTCATATAATGTAGTTGCATCATG 57.964 34.615 0.00 0.00 0.00 3.07
2819 2882 7.662669 TGCTCATATAATGTAGTTGCATCATGT 59.337 33.333 0.00 0.00 0.00 3.21
2820 2883 8.509690 GCTCATATAATGTAGTTGCATCATGTT 58.490 33.333 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 9.014297 CAACCAGGTAGAACATAGAGAAATTTT 57.986 33.333 0.00 0.00 0.00 1.82
55 56 1.582937 CGAGTCCGATGACGAACCG 60.583 63.158 0.00 0.00 46.51 4.44
75 76 7.596621 CGATTCTCATAGCATCTTTTAGCACTA 59.403 37.037 0.00 0.00 0.00 2.74
104 105 5.812436 TGGTACAACAAATGCATCTTCGCA 61.812 41.667 0.00 0.00 41.01 5.10
354 355 2.632996 AGGTTCTCTCCACGACATTTCA 59.367 45.455 0.00 0.00 0.00 2.69
362 363 0.035458 AGCCAAAGGTTCTCTCCACG 59.965 55.000 0.00 0.00 0.00 4.94
409 410 9.007901 CCTCTATGTCAAAGAAAGAACAAGAAT 57.992 33.333 0.00 0.00 0.00 2.40
438 439 6.945435 ACAATCAAATGGACATGTGTTACCTA 59.055 34.615 1.15 0.00 30.18 3.08
579 580 8.333186 GTCGACTTACGGAAGCAATAAATTATT 58.667 33.333 7.48 0.00 42.82 1.40
587 588 1.625616 CGTCGACTTACGGAAGCAAT 58.374 50.000 14.70 0.00 42.82 3.56
597 598 0.377554 GCTAGCTCAGCGTCGACTTA 59.622 55.000 14.70 0.00 41.37 2.24
698 699 5.889853 AGCATACATCTCATCCACAAATTGT 59.110 36.000 0.00 0.00 0.00 2.71
706 707 4.281941 GGTACTCAGCATACATCTCATCCA 59.718 45.833 0.00 0.00 0.00 3.41
1049 1063 1.068434 CAACAAGGACGGCCAACAATT 59.932 47.619 11.69 0.00 36.29 2.32
1205 1219 5.059161 TGGTAATGATCTCATACTGCTTGC 58.941 41.667 0.00 0.00 35.10 4.01
1263 1277 5.680619 TCAACTGACACCATGTTCTTTACT 58.319 37.500 0.00 0.00 0.00 2.24
1365 1379 8.514594 CCTACATAAAACACACAAATGAGATGT 58.485 33.333 0.00 0.00 0.00 3.06
1385 1408 3.610911 GTGCTTCCTTGTTAGCCTACAT 58.389 45.455 0.00 0.00 36.56 2.29
1469 1492 3.387091 ACCTGCACCGGTCGCATA 61.387 61.111 25.16 9.57 39.02 3.14
1576 1599 0.179048 TGCACAAGATAGCATCCCCG 60.179 55.000 0.00 0.00 35.51 5.73
1647 1670 5.898397 GGAGTCACCTTAGGTATAGGAAGTT 59.102 44.000 2.52 0.00 36.58 2.66
1763 1786 3.491447 GCCATGAGTGCTTCAAACAAACT 60.491 43.478 0.00 0.00 39.77 2.66
1792 1815 2.239654 CCATGGCTTCCTTAACTCCTCA 59.760 50.000 0.00 0.00 0.00 3.86
1877 1901 4.336993 ACAAGTGGATAGTTCGCAAACAAA 59.663 37.500 0.00 0.00 37.88 2.83
2006 2031 2.969628 TGGAAAAAGGAAGGATGCCAA 58.030 42.857 0.00 0.00 34.43 4.52
2040 2065 2.981400 AGGTCAAAACAATAACGCGG 57.019 45.000 12.47 0.00 0.00 6.46
2041 2066 6.081049 TGAATAAGGTCAAAACAATAACGCG 58.919 36.000 3.53 3.53 0.00 6.01
2043 2068 9.113876 GTTCTGAATAAGGTCAAAACAATAACG 57.886 33.333 0.00 0.00 30.33 3.18
2226 2289 8.689061 CATGGAATTTATTGTTGGAATCAGAGA 58.311 33.333 0.00 0.00 0.00 3.10
2370 2433 3.694072 AGCAGTAGCAAAACAAACAGACA 59.306 39.130 0.00 0.00 45.49 3.41
2371 2434 4.292977 AGCAGTAGCAAAACAAACAGAC 57.707 40.909 0.00 0.00 45.49 3.51
2372 2435 6.039270 ACAATAGCAGTAGCAAAACAAACAGA 59.961 34.615 0.00 0.00 45.49 3.41
2373 2436 6.208644 ACAATAGCAGTAGCAAAACAAACAG 58.791 36.000 0.00 0.00 45.49 3.16
2374 2437 6.142818 ACAATAGCAGTAGCAAAACAAACA 57.857 33.333 0.00 0.00 45.49 2.83
2375 2438 8.742554 ATAACAATAGCAGTAGCAAAACAAAC 57.257 30.769 0.00 0.00 45.49 2.93
2376 2439 9.757227 AAATAACAATAGCAGTAGCAAAACAAA 57.243 25.926 0.00 0.00 45.49 2.83
2377 2440 9.405587 GAAATAACAATAGCAGTAGCAAAACAA 57.594 29.630 0.00 0.00 45.49 2.83
2378 2441 7.748683 CGAAATAACAATAGCAGTAGCAAAACA 59.251 33.333 0.00 0.00 45.49 2.83
2379 2442 7.218204 CCGAAATAACAATAGCAGTAGCAAAAC 59.782 37.037 0.00 0.00 45.49 2.43
2380 2443 7.094549 ACCGAAATAACAATAGCAGTAGCAAAA 60.095 33.333 0.00 0.00 45.49 2.44
2381 2444 6.373216 ACCGAAATAACAATAGCAGTAGCAAA 59.627 34.615 0.00 0.00 45.49 3.68
2382 2445 5.878116 ACCGAAATAACAATAGCAGTAGCAA 59.122 36.000 0.00 0.00 45.49 3.91
2383 2446 5.424757 ACCGAAATAACAATAGCAGTAGCA 58.575 37.500 0.00 0.00 45.49 3.49
2384 2447 5.986004 ACCGAAATAACAATAGCAGTAGC 57.014 39.130 0.00 0.00 42.56 3.58
2385 2448 8.009974 GCATAACCGAAATAACAATAGCAGTAG 58.990 37.037 0.00 0.00 0.00 2.57
2386 2449 7.713507 AGCATAACCGAAATAACAATAGCAGTA 59.286 33.333 0.00 0.00 0.00 2.74
2387 2450 6.542370 AGCATAACCGAAATAACAATAGCAGT 59.458 34.615 0.00 0.00 0.00 4.40
2388 2451 6.959361 AGCATAACCGAAATAACAATAGCAG 58.041 36.000 0.00 0.00 0.00 4.24
2389 2452 6.935741 AGCATAACCGAAATAACAATAGCA 57.064 33.333 0.00 0.00 0.00 3.49
2390 2453 9.329913 CATAAGCATAACCGAAATAACAATAGC 57.670 33.333 0.00 0.00 0.00 2.97
2391 2454 9.825972 CCATAAGCATAACCGAAATAACAATAG 57.174 33.333 0.00 0.00 0.00 1.73
2392 2455 9.562408 TCCATAAGCATAACCGAAATAACAATA 57.438 29.630 0.00 0.00 0.00 1.90
2393 2456 8.458573 TCCATAAGCATAACCGAAATAACAAT 57.541 30.769 0.00 0.00 0.00 2.71
2394 2457 7.867305 TCCATAAGCATAACCGAAATAACAA 57.133 32.000 0.00 0.00 0.00 2.83
2395 2458 7.095397 CGATCCATAAGCATAACCGAAATAACA 60.095 37.037 0.00 0.00 0.00 2.41
2396 2459 7.234384 CGATCCATAAGCATAACCGAAATAAC 58.766 38.462 0.00 0.00 0.00 1.89
2397 2460 6.370442 CCGATCCATAAGCATAACCGAAATAA 59.630 38.462 0.00 0.00 0.00 1.40
2398 2461 5.872617 CCGATCCATAAGCATAACCGAAATA 59.127 40.000 0.00 0.00 0.00 1.40
2399 2462 4.695455 CCGATCCATAAGCATAACCGAAAT 59.305 41.667 0.00 0.00 0.00 2.17
2400 2463 4.062293 CCGATCCATAAGCATAACCGAAA 58.938 43.478 0.00 0.00 0.00 3.46
2401 2464 3.070446 ACCGATCCATAAGCATAACCGAA 59.930 43.478 0.00 0.00 0.00 4.30
2402 2465 2.631062 ACCGATCCATAAGCATAACCGA 59.369 45.455 0.00 0.00 0.00 4.69
2403 2466 2.736721 CACCGATCCATAAGCATAACCG 59.263 50.000 0.00 0.00 0.00 4.44
2404 2467 3.074412 CCACCGATCCATAAGCATAACC 58.926 50.000 0.00 0.00 0.00 2.85
2405 2468 3.740115 ACCACCGATCCATAAGCATAAC 58.260 45.455 0.00 0.00 0.00 1.89
2406 2469 4.431416 AACCACCGATCCATAAGCATAA 57.569 40.909 0.00 0.00 0.00 1.90
2407 2470 4.262721 GGTAACCACCGATCCATAAGCATA 60.263 45.833 0.00 0.00 34.36 3.14
2408 2471 3.496160 GGTAACCACCGATCCATAAGCAT 60.496 47.826 0.00 0.00 34.36 3.79
2409 2472 2.158871 GGTAACCACCGATCCATAAGCA 60.159 50.000 0.00 0.00 34.36 3.91
2410 2473 2.490991 GGTAACCACCGATCCATAAGC 58.509 52.381 0.00 0.00 34.36 3.09
2421 2484 2.210116 CATAGCATGACGGTAACCACC 58.790 52.381 0.00 0.00 41.93 4.61
2422 2485 2.901249 ACATAGCATGACGGTAACCAC 58.099 47.619 0.00 0.00 0.00 4.16
2423 2486 3.620427 AACATAGCATGACGGTAACCA 57.380 42.857 0.00 0.00 0.00 3.67
2424 2487 4.634443 AGAAAACATAGCATGACGGTAACC 59.366 41.667 0.00 0.00 0.00 2.85
2425 2488 5.796350 AGAAAACATAGCATGACGGTAAC 57.204 39.130 0.00 0.00 0.00 2.50
2426 2489 5.391523 GCAAGAAAACATAGCATGACGGTAA 60.392 40.000 0.00 0.00 0.00 2.85
2427 2490 4.094294 GCAAGAAAACATAGCATGACGGTA 59.906 41.667 0.00 0.00 0.00 4.02
2428 2491 3.119849 GCAAGAAAACATAGCATGACGGT 60.120 43.478 0.00 0.00 0.00 4.83
2429 2492 3.119884 TGCAAGAAAACATAGCATGACGG 60.120 43.478 0.00 0.00 0.00 4.79
2430 2493 3.848019 GTGCAAGAAAACATAGCATGACG 59.152 43.478 0.00 0.00 37.56 4.35
2431 2494 5.051891 AGTGCAAGAAAACATAGCATGAC 57.948 39.130 0.00 0.00 37.56 3.06
2432 2495 4.142838 CGAGTGCAAGAAAACATAGCATGA 60.143 41.667 0.00 0.00 37.56 3.07
2433 2496 4.093514 CGAGTGCAAGAAAACATAGCATG 58.906 43.478 0.00 0.00 37.56 4.06
2434 2497 3.127548 CCGAGTGCAAGAAAACATAGCAT 59.872 43.478 0.00 0.00 37.56 3.79
2435 2498 2.483877 CCGAGTGCAAGAAAACATAGCA 59.516 45.455 0.00 0.00 0.00 3.49
2436 2499 2.484264 ACCGAGTGCAAGAAAACATAGC 59.516 45.455 0.00 0.00 0.00 2.97
2437 2500 4.749245 AACCGAGTGCAAGAAAACATAG 57.251 40.909 0.00 0.00 0.00 2.23
2438 2501 5.935206 TGATAACCGAGTGCAAGAAAACATA 59.065 36.000 0.00 0.00 0.00 2.29
2439 2502 4.759693 TGATAACCGAGTGCAAGAAAACAT 59.240 37.500 0.00 0.00 0.00 2.71
2440 2503 4.130857 TGATAACCGAGTGCAAGAAAACA 58.869 39.130 0.00 0.00 0.00 2.83
2441 2504 4.742438 TGATAACCGAGTGCAAGAAAAC 57.258 40.909 0.00 0.00 0.00 2.43
2442 2505 5.000591 TCATGATAACCGAGTGCAAGAAAA 58.999 37.500 0.00 0.00 0.00 2.29
2443 2506 4.574892 TCATGATAACCGAGTGCAAGAAA 58.425 39.130 0.00 0.00 0.00 2.52
2444 2507 4.200838 TCATGATAACCGAGTGCAAGAA 57.799 40.909 0.00 0.00 0.00 2.52
2445 2508 3.885724 TCATGATAACCGAGTGCAAGA 57.114 42.857 0.00 0.00 0.00 3.02
2446 2509 4.375272 AGATCATGATAACCGAGTGCAAG 58.625 43.478 8.54 0.00 0.00 4.01
2447 2510 4.406648 AGATCATGATAACCGAGTGCAA 57.593 40.909 8.54 0.00 0.00 4.08
2448 2511 4.584743 AGTAGATCATGATAACCGAGTGCA 59.415 41.667 8.54 0.00 0.00 4.57
2449 2512 5.127693 AGTAGATCATGATAACCGAGTGC 57.872 43.478 8.54 0.00 0.00 4.40
2450 2513 6.150307 AGCTAGTAGATCATGATAACCGAGTG 59.850 42.308 8.54 0.00 0.00 3.51
2451 2514 6.242396 AGCTAGTAGATCATGATAACCGAGT 58.758 40.000 8.54 0.00 0.00 4.18
2452 2515 6.751514 AGCTAGTAGATCATGATAACCGAG 57.248 41.667 8.54 10.86 0.00 4.63
2453 2516 7.395617 ACTAGCTAGTAGATCATGATAACCGA 58.604 38.462 24.97 1.22 34.13 4.69
2454 2517 7.618502 ACTAGCTAGTAGATCATGATAACCG 57.381 40.000 24.97 5.85 34.13 4.44
2477 2540 9.173939 GCAAGCATGAACATATGAAAGTAATAC 57.826 33.333 10.38 0.00 0.00 1.89
2478 2541 9.123902 AGCAAGCATGAACATATGAAAGTAATA 57.876 29.630 10.38 0.00 0.00 0.98
2479 2542 8.004087 AGCAAGCATGAACATATGAAAGTAAT 57.996 30.769 10.38 0.00 0.00 1.89
2480 2543 7.395190 AGCAAGCATGAACATATGAAAGTAA 57.605 32.000 10.38 0.00 0.00 2.24
2481 2544 7.770433 ACTAGCAAGCATGAACATATGAAAGTA 59.230 33.333 10.38 0.00 0.00 2.24
2482 2545 5.909621 AGCAAGCATGAACATATGAAAGT 57.090 34.783 10.38 0.00 0.00 2.66
2483 2546 7.024340 ACTAGCAAGCATGAACATATGAAAG 57.976 36.000 10.38 0.00 0.00 2.62
2484 2547 7.770433 ACTACTAGCAAGCATGAACATATGAAA 59.230 33.333 10.38 0.00 0.00 2.69
2485 2548 7.275183 ACTACTAGCAAGCATGAACATATGAA 58.725 34.615 10.38 0.00 0.00 2.57
2486 2549 6.820335 ACTACTAGCAAGCATGAACATATGA 58.180 36.000 10.38 0.00 0.00 2.15
2487 2550 7.225341 TGAACTACTAGCAAGCATGAACATATG 59.775 37.037 0.00 0.00 0.00 1.78
2488 2551 7.275183 TGAACTACTAGCAAGCATGAACATAT 58.725 34.615 0.00 0.00 0.00 1.78
2489 2552 6.639563 TGAACTACTAGCAAGCATGAACATA 58.360 36.000 0.00 0.00 0.00 2.29
2490 2553 5.491070 TGAACTACTAGCAAGCATGAACAT 58.509 37.500 0.00 0.00 0.00 2.71
2491 2554 4.893608 TGAACTACTAGCAAGCATGAACA 58.106 39.130 0.00 0.00 0.00 3.18
2492 2555 5.352569 ACATGAACTACTAGCAAGCATGAAC 59.647 40.000 15.61 0.00 36.19 3.18
2493 2556 5.491070 ACATGAACTACTAGCAAGCATGAA 58.509 37.500 15.61 0.00 36.19 2.57
2494 2557 5.089970 ACATGAACTACTAGCAAGCATGA 57.910 39.130 15.61 0.00 36.19 3.07
2495 2558 5.448225 CCAACATGAACTACTAGCAAGCATG 60.448 44.000 0.00 0.00 38.03 4.06
2496 2559 4.637534 CCAACATGAACTACTAGCAAGCAT 59.362 41.667 0.00 0.00 0.00 3.79
2497 2560 4.002982 CCAACATGAACTACTAGCAAGCA 58.997 43.478 0.00 0.00 0.00 3.91
2498 2561 4.003648 ACCAACATGAACTACTAGCAAGC 58.996 43.478 0.00 0.00 0.00 4.01
2499 2562 4.997395 ACACCAACATGAACTACTAGCAAG 59.003 41.667 0.00 0.00 0.00 4.01
2500 2563 4.968259 ACACCAACATGAACTACTAGCAA 58.032 39.130 0.00 0.00 0.00 3.91
2501 2564 4.617253 ACACCAACATGAACTACTAGCA 57.383 40.909 0.00 0.00 0.00 3.49
2502 2565 4.154195 CCAACACCAACATGAACTACTAGC 59.846 45.833 0.00 0.00 0.00 3.42
2503 2566 5.305585 ACCAACACCAACATGAACTACTAG 58.694 41.667 0.00 0.00 0.00 2.57
2504 2567 5.298989 ACCAACACCAACATGAACTACTA 57.701 39.130 0.00 0.00 0.00 1.82
2505 2568 4.164843 ACCAACACCAACATGAACTACT 57.835 40.909 0.00 0.00 0.00 2.57
2506 2569 4.911514 AACCAACACCAACATGAACTAC 57.088 40.909 0.00 0.00 0.00 2.73
2507 2570 6.065374 ACATAACCAACACCAACATGAACTA 58.935 36.000 0.00 0.00 0.00 2.24
2508 2571 4.892934 ACATAACCAACACCAACATGAACT 59.107 37.500 0.00 0.00 0.00 3.01
2509 2572 5.195001 ACATAACCAACACCAACATGAAC 57.805 39.130 0.00 0.00 0.00 3.18
2510 2573 5.596361 AGAACATAACCAACACCAACATGAA 59.404 36.000 0.00 0.00 0.00 2.57
2511 2574 5.136828 AGAACATAACCAACACCAACATGA 58.863 37.500 0.00 0.00 0.00 3.07
2512 2575 5.452078 AGAACATAACCAACACCAACATG 57.548 39.130 0.00 0.00 0.00 3.21
2513 2576 6.279882 CAAAGAACATAACCAACACCAACAT 58.720 36.000 0.00 0.00 0.00 2.71
2514 2577 5.394663 CCAAAGAACATAACCAACACCAACA 60.395 40.000 0.00 0.00 0.00 3.33
2515 2578 5.047188 CCAAAGAACATAACCAACACCAAC 58.953 41.667 0.00 0.00 0.00 3.77
2516 2579 4.712337 ACCAAAGAACATAACCAACACCAA 59.288 37.500 0.00 0.00 0.00 3.67
2517 2580 4.098654 CACCAAAGAACATAACCAACACCA 59.901 41.667 0.00 0.00 0.00 4.17
2518 2581 4.616953 CACCAAAGAACATAACCAACACC 58.383 43.478 0.00 0.00 0.00 4.16
2519 2582 4.048504 GCACCAAAGAACATAACCAACAC 58.951 43.478 0.00 0.00 0.00 3.32
2520 2583 3.701542 TGCACCAAAGAACATAACCAACA 59.298 39.130 0.00 0.00 0.00 3.33
2521 2584 4.314740 TGCACCAAAGAACATAACCAAC 57.685 40.909 0.00 0.00 0.00 3.77
2522 2585 4.586421 TCATGCACCAAAGAACATAACCAA 59.414 37.500 0.00 0.00 0.00 3.67
2523 2586 4.022416 GTCATGCACCAAAGAACATAACCA 60.022 41.667 0.00 0.00 0.00 3.67
2524 2587 4.218417 AGTCATGCACCAAAGAACATAACC 59.782 41.667 0.00 0.00 0.00 2.85
2525 2588 5.376854 AGTCATGCACCAAAGAACATAAC 57.623 39.130 0.00 0.00 0.00 1.89
2526 2589 6.037062 CGATAGTCATGCACCAAAGAACATAA 59.963 38.462 0.00 0.00 0.00 1.90
2527 2590 5.523552 CGATAGTCATGCACCAAAGAACATA 59.476 40.000 0.00 0.00 0.00 2.29
2528 2591 4.333649 CGATAGTCATGCACCAAAGAACAT 59.666 41.667 0.00 0.00 0.00 2.71
2529 2592 3.684305 CGATAGTCATGCACCAAAGAACA 59.316 43.478 0.00 0.00 0.00 3.18
2530 2593 4.264543 CGATAGTCATGCACCAAAGAAC 57.735 45.455 0.00 0.00 0.00 3.01
2545 2608 4.926238 CGGTACTCGGTAATAGACGATAGT 59.074 45.833 0.00 0.00 44.59 2.12
2546 2609 4.926238 ACGGTACTCGGTAATAGACGATAG 59.074 45.833 8.31 0.00 44.45 2.08
2547 2610 4.883083 ACGGTACTCGGTAATAGACGATA 58.117 43.478 8.31 0.00 44.45 2.92
2548 2611 3.733337 ACGGTACTCGGTAATAGACGAT 58.267 45.455 8.31 0.00 44.45 3.73
2549 2612 3.179443 ACGGTACTCGGTAATAGACGA 57.821 47.619 8.31 0.00 44.45 4.20
2550 2613 3.309682 TCAACGGTACTCGGTAATAGACG 59.690 47.826 8.31 0.00 44.45 4.18
2551 2614 4.882671 TCAACGGTACTCGGTAATAGAC 57.117 45.455 8.31 0.00 44.45 2.59
2552 2615 6.348786 GCATATCAACGGTACTCGGTAATAGA 60.349 42.308 8.31 0.00 44.45 1.98
2553 2616 5.798934 GCATATCAACGGTACTCGGTAATAG 59.201 44.000 8.31 0.00 44.45 1.73
2554 2617 5.241285 TGCATATCAACGGTACTCGGTAATA 59.759 40.000 8.31 0.00 44.45 0.98
2555 2618 4.038282 TGCATATCAACGGTACTCGGTAAT 59.962 41.667 8.31 0.00 44.45 1.89
2556 2619 3.380954 TGCATATCAACGGTACTCGGTAA 59.619 43.478 8.31 0.00 44.45 2.85
2557 2620 2.950975 TGCATATCAACGGTACTCGGTA 59.049 45.455 8.31 0.00 44.45 4.02
2558 2621 1.752498 TGCATATCAACGGTACTCGGT 59.248 47.619 8.31 0.00 44.45 4.69
2559 2622 2.502213 TGCATATCAACGGTACTCGG 57.498 50.000 8.31 0.00 44.45 4.63
2560 2623 6.452480 CGAAATATGCATATCAACGGTACTCG 60.452 42.308 19.35 11.71 45.88 4.18
2561 2624 6.365247 ACGAAATATGCATATCAACGGTACTC 59.635 38.462 27.15 12.77 0.00 2.59
2562 2625 6.220930 ACGAAATATGCATATCAACGGTACT 58.779 36.000 27.15 14.37 0.00 2.73
2563 2626 6.462073 ACGAAATATGCATATCAACGGTAC 57.538 37.500 27.15 12.77 0.00 3.34
2564 2627 6.565060 GCAACGAAATATGCATATCAACGGTA 60.565 38.462 27.15 4.38 42.12 4.02
2565 2628 5.747565 CAACGAAATATGCATATCAACGGT 58.252 37.500 27.15 23.07 0.00 4.83
2566 2629 4.612614 GCAACGAAATATGCATATCAACGG 59.387 41.667 27.15 18.44 42.12 4.44
2567 2630 5.204101 TGCAACGAAATATGCATATCAACG 58.796 37.500 19.35 22.67 46.87 4.10
2576 2639 4.461405 CAGCTAGATGCAACGAAATATGC 58.539 43.478 0.00 0.00 45.94 3.14
2577 2640 4.512944 ACCAGCTAGATGCAACGAAATATG 59.487 41.667 1.39 0.00 45.94 1.78
2578 2641 4.708177 ACCAGCTAGATGCAACGAAATAT 58.292 39.130 1.39 0.00 45.94 1.28
2579 2642 4.137116 ACCAGCTAGATGCAACGAAATA 57.863 40.909 1.39 0.00 45.94 1.40
2580 2643 2.991250 ACCAGCTAGATGCAACGAAAT 58.009 42.857 1.39 0.00 45.94 2.17
2581 2644 2.472695 ACCAGCTAGATGCAACGAAA 57.527 45.000 1.39 0.00 45.94 3.46
2582 2645 2.472695 AACCAGCTAGATGCAACGAA 57.527 45.000 1.39 0.00 45.94 3.85
2583 2646 2.472695 AAACCAGCTAGATGCAACGA 57.527 45.000 1.39 0.00 45.94 3.85
2584 2647 3.546815 GCATAAACCAGCTAGATGCAACG 60.547 47.826 1.39 0.00 45.94 4.10
2585 2648 3.629398 AGCATAAACCAGCTAGATGCAAC 59.371 43.478 1.39 0.00 44.26 4.17
2586 2649 3.879295 GAGCATAAACCAGCTAGATGCAA 59.121 43.478 1.39 0.00 44.26 4.08
2587 2650 3.118298 TGAGCATAAACCAGCTAGATGCA 60.118 43.478 1.39 0.00 44.26 3.96
2588 2651 3.249559 GTGAGCATAAACCAGCTAGATGC 59.750 47.826 1.39 2.27 42.04 3.91
2589 2652 3.812053 GGTGAGCATAAACCAGCTAGATG 59.188 47.826 0.00 0.00 42.04 2.90
2590 2653 3.713764 AGGTGAGCATAAACCAGCTAGAT 59.286 43.478 0.00 0.00 42.04 1.98
2591 2654 3.107601 AGGTGAGCATAAACCAGCTAGA 58.892 45.455 0.00 0.00 42.04 2.43
2592 2655 3.201290 CAGGTGAGCATAAACCAGCTAG 58.799 50.000 0.00 0.00 42.04 3.42
2593 2656 2.092968 CCAGGTGAGCATAAACCAGCTA 60.093 50.000 0.00 0.00 42.04 3.32
2594 2657 1.340405 CCAGGTGAGCATAAACCAGCT 60.340 52.381 0.00 0.00 45.25 4.24
2595 2658 1.098050 CCAGGTGAGCATAAACCAGC 58.902 55.000 0.00 0.00 39.05 4.85
2596 2659 2.496899 ACCAGGTGAGCATAAACCAG 57.503 50.000 0.00 0.00 39.05 4.00
2597 2660 2.910319 ACTACCAGGTGAGCATAAACCA 59.090 45.455 0.76 0.00 39.05 3.67
2598 2661 3.629142 ACTACCAGGTGAGCATAAACC 57.371 47.619 0.76 0.00 36.66 3.27
2599 2662 6.113411 ACAATACTACCAGGTGAGCATAAAC 58.887 40.000 0.76 0.00 0.00 2.01
2600 2663 6.308015 ACAATACTACCAGGTGAGCATAAA 57.692 37.500 0.76 0.00 0.00 1.40
2601 2664 5.451381 CGACAATACTACCAGGTGAGCATAA 60.451 44.000 0.76 0.00 0.00 1.90
2602 2665 4.037565 CGACAATACTACCAGGTGAGCATA 59.962 45.833 0.76 0.00 0.00 3.14
2603 2666 3.181475 CGACAATACTACCAGGTGAGCAT 60.181 47.826 0.76 0.00 0.00 3.79
2604 2667 2.165641 CGACAATACTACCAGGTGAGCA 59.834 50.000 0.76 0.00 0.00 4.26
2605 2668 2.165845 ACGACAATACTACCAGGTGAGC 59.834 50.000 0.76 0.00 0.00 4.26
2606 2669 4.451629 AACGACAATACTACCAGGTGAG 57.548 45.455 0.76 0.00 0.00 3.51
2607 2670 5.419788 ACATAACGACAATACTACCAGGTGA 59.580 40.000 0.76 0.00 0.00 4.02
2608 2671 5.657474 ACATAACGACAATACTACCAGGTG 58.343 41.667 0.76 0.00 0.00 4.00
2609 2672 5.927281 ACATAACGACAATACTACCAGGT 57.073 39.130 0.00 0.00 0.00 4.00
2610 2673 6.570692 AGAACATAACGACAATACTACCAGG 58.429 40.000 0.00 0.00 0.00 4.45
2611 2674 7.464178 GCAAGAACATAACGACAATACTACCAG 60.464 40.741 0.00 0.00 0.00 4.00
2612 2675 6.311935 GCAAGAACATAACGACAATACTACCA 59.688 38.462 0.00 0.00 0.00 3.25
2613 2676 6.311935 TGCAAGAACATAACGACAATACTACC 59.688 38.462 0.00 0.00 0.00 3.18
2614 2677 7.285783 TGCAAGAACATAACGACAATACTAC 57.714 36.000 0.00 0.00 0.00 2.73
2615 2678 7.011016 CCATGCAAGAACATAACGACAATACTA 59.989 37.037 0.00 0.00 0.00 1.82
2616 2679 6.183360 CCATGCAAGAACATAACGACAATACT 60.183 38.462 0.00 0.00 0.00 2.12
2617 2680 5.965334 CCATGCAAGAACATAACGACAATAC 59.035 40.000 0.00 0.00 0.00 1.89
2618 2681 5.645929 ACCATGCAAGAACATAACGACAATA 59.354 36.000 0.00 0.00 0.00 1.90
2619 2682 4.458989 ACCATGCAAGAACATAACGACAAT 59.541 37.500 0.00 0.00 0.00 2.71
2620 2683 3.818210 ACCATGCAAGAACATAACGACAA 59.182 39.130 0.00 0.00 0.00 3.18
2621 2684 3.407698 ACCATGCAAGAACATAACGACA 58.592 40.909 0.00 0.00 0.00 4.35
2622 2685 5.734855 ATACCATGCAAGAACATAACGAC 57.265 39.130 0.00 0.00 0.00 4.34
2623 2686 6.751514 AAATACCATGCAAGAACATAACGA 57.248 33.333 0.00 0.00 0.00 3.85
2624 2687 9.515020 AAATAAATACCATGCAAGAACATAACG 57.485 29.630 0.00 0.00 0.00 3.18
2647 2710 9.881649 CATAGCATGACCACTAGTATCATAAAT 57.118 33.333 17.28 10.63 31.83 1.40
2648 2711 7.819415 GCATAGCATGACCACTAGTATCATAAA 59.181 37.037 17.28 9.29 31.83 1.40
2649 2712 7.179160 AGCATAGCATGACCACTAGTATCATAA 59.821 37.037 17.28 9.55 31.83 1.90
2650 2713 6.665248 AGCATAGCATGACCACTAGTATCATA 59.335 38.462 17.28 6.96 31.83 2.15
2651 2714 5.483231 AGCATAGCATGACCACTAGTATCAT 59.517 40.000 13.58 13.58 33.28 2.45
2652 2715 4.835056 AGCATAGCATGACCACTAGTATCA 59.165 41.667 10.56 10.56 0.00 2.15
2653 2716 5.398603 AGCATAGCATGACCACTAGTATC 57.601 43.478 0.00 0.00 0.00 2.24
2654 2717 5.815233 AAGCATAGCATGACCACTAGTAT 57.185 39.130 0.00 0.00 0.00 2.12
2655 2718 6.493458 TCATAAGCATAGCATGACCACTAGTA 59.507 38.462 0.00 0.00 0.00 1.82
2656 2719 5.305386 TCATAAGCATAGCATGACCACTAGT 59.695 40.000 0.00 0.00 0.00 2.57
2657 2720 5.787380 TCATAAGCATAGCATGACCACTAG 58.213 41.667 0.00 0.00 0.00 2.57
2658 2721 5.806654 TCATAAGCATAGCATGACCACTA 57.193 39.130 0.00 0.00 0.00 2.74
2659 2722 4.694760 TCATAAGCATAGCATGACCACT 57.305 40.909 0.00 0.00 0.00 4.00
2660 2723 6.401394 TCTATCATAAGCATAGCATGACCAC 58.599 40.000 0.00 0.00 31.83 4.16
2661 2724 6.212187 ACTCTATCATAAGCATAGCATGACCA 59.788 38.462 0.00 0.00 31.83 4.02
2662 2725 6.638610 ACTCTATCATAAGCATAGCATGACC 58.361 40.000 0.00 0.00 31.83 4.02
2663 2726 9.814899 ATAACTCTATCATAAGCATAGCATGAC 57.185 33.333 0.00 0.00 31.83 3.06
2664 2727 9.813446 CATAACTCTATCATAAGCATAGCATGA 57.187 33.333 0.00 0.00 33.47 3.07
2665 2728 9.597170 ACATAACTCTATCATAAGCATAGCATG 57.403 33.333 0.00 0.00 0.00 4.06
2671 2734 9.618890 ACACAAACATAACTCTATCATAAGCAT 57.381 29.630 0.00 0.00 0.00 3.79
2672 2735 9.448438 AACACAAACATAACTCTATCATAAGCA 57.552 29.630 0.00 0.00 0.00 3.91
2681 2744 9.448438 AGCATGAATAACACAAACATAACTCTA 57.552 29.630 0.00 0.00 0.00 2.43
2682 2745 8.340618 AGCATGAATAACACAAACATAACTCT 57.659 30.769 0.00 0.00 0.00 3.24
2683 2746 7.426456 CGAGCATGAATAACACAAACATAACTC 59.574 37.037 0.00 0.00 0.00 3.01
2684 2747 7.094805 ACGAGCATGAATAACACAAACATAACT 60.095 33.333 0.00 0.00 0.00 2.24
2685 2748 7.021196 ACGAGCATGAATAACACAAACATAAC 58.979 34.615 0.00 0.00 0.00 1.89
2686 2749 7.095017 TGACGAGCATGAATAACACAAACATAA 60.095 33.333 0.00 0.00 0.00 1.90
2687 2750 6.370166 TGACGAGCATGAATAACACAAACATA 59.630 34.615 0.00 0.00 0.00 2.29
2688 2751 5.181056 TGACGAGCATGAATAACACAAACAT 59.819 36.000 0.00 0.00 0.00 2.71
2689 2752 4.513318 TGACGAGCATGAATAACACAAACA 59.487 37.500 0.00 0.00 0.00 2.83
2690 2753 5.029650 TGACGAGCATGAATAACACAAAC 57.970 39.130 0.00 0.00 0.00 2.93
2691 2754 4.754618 ACTGACGAGCATGAATAACACAAA 59.245 37.500 0.00 0.00 0.00 2.83
2692 2755 4.314961 ACTGACGAGCATGAATAACACAA 58.685 39.130 0.00 0.00 0.00 3.33
2693 2756 3.925379 ACTGACGAGCATGAATAACACA 58.075 40.909 0.00 0.00 0.00 3.72
2694 2757 5.557136 GCATACTGACGAGCATGAATAACAC 60.557 44.000 0.00 0.00 0.00 3.32
2695 2758 4.507756 GCATACTGACGAGCATGAATAACA 59.492 41.667 0.00 0.00 0.00 2.41
2696 2759 4.084328 GGCATACTGACGAGCATGAATAAC 60.084 45.833 0.00 0.00 0.00 1.89
2697 2760 4.058124 GGCATACTGACGAGCATGAATAA 58.942 43.478 0.00 0.00 0.00 1.40
2698 2761 3.069443 TGGCATACTGACGAGCATGAATA 59.931 43.478 0.00 0.00 0.00 1.75
2699 2762 2.158914 TGGCATACTGACGAGCATGAAT 60.159 45.455 0.00 0.00 0.00 2.57
2700 2763 1.206849 TGGCATACTGACGAGCATGAA 59.793 47.619 0.00 0.00 0.00 2.57
2701 2764 0.823460 TGGCATACTGACGAGCATGA 59.177 50.000 0.00 0.00 0.00 3.07
2702 2765 1.529865 CATGGCATACTGACGAGCATG 59.470 52.381 0.00 0.00 0.00 4.06
2703 2766 1.875009 CATGGCATACTGACGAGCAT 58.125 50.000 0.00 0.00 0.00 3.79
2704 2767 0.811219 GCATGGCATACTGACGAGCA 60.811 55.000 0.00 0.00 29.63 4.26
2705 2768 0.531532 AGCATGGCATACTGACGAGC 60.532 55.000 0.00 0.00 0.00 5.03
2706 2769 1.202452 TGAGCATGGCATACTGACGAG 60.202 52.381 4.61 0.00 0.00 4.18
2707 2770 0.823460 TGAGCATGGCATACTGACGA 59.177 50.000 4.61 0.00 0.00 4.20
2708 2771 1.215244 CTGAGCATGGCATACTGACG 58.785 55.000 4.61 0.00 0.00 4.35
2709 2772 2.208431 GACTGAGCATGGCATACTGAC 58.792 52.381 4.61 0.00 0.00 3.51
2710 2773 1.202452 CGACTGAGCATGGCATACTGA 60.202 52.381 4.61 0.00 0.00 3.41
2711 2774 1.215244 CGACTGAGCATGGCATACTG 58.785 55.000 4.61 4.68 0.00 2.74
2712 2775 0.105593 CCGACTGAGCATGGCATACT 59.894 55.000 0.00 0.00 0.00 2.12
2713 2776 0.104855 TCCGACTGAGCATGGCATAC 59.895 55.000 0.00 0.00 0.00 2.39
2714 2777 1.051008 ATCCGACTGAGCATGGCATA 58.949 50.000 0.00 0.00 0.00 3.14
2715 2778 1.051008 TATCCGACTGAGCATGGCAT 58.949 50.000 0.00 0.00 0.00 4.40
2716 2779 1.051008 ATATCCGACTGAGCATGGCA 58.949 50.000 0.00 0.00 0.00 4.92
2717 2780 3.193263 CATATATCCGACTGAGCATGGC 58.807 50.000 0.00 0.00 0.00 4.40
2718 2781 3.118847 AGCATATATCCGACTGAGCATGG 60.119 47.826 0.00 0.00 0.00 3.66
2719 2782 4.120792 AGCATATATCCGACTGAGCATG 57.879 45.455 0.00 0.00 0.00 4.06
2720 2783 4.221482 TGAAGCATATATCCGACTGAGCAT 59.779 41.667 0.00 0.00 0.00 3.79
2721 2784 3.573967 TGAAGCATATATCCGACTGAGCA 59.426 43.478 0.00 0.00 0.00 4.26
2722 2785 4.179926 TGAAGCATATATCCGACTGAGC 57.820 45.455 0.00 0.00 0.00 4.26
2723 2786 6.090493 CACAATGAAGCATATATCCGACTGAG 59.910 42.308 0.00 0.00 0.00 3.35
2724 2787 5.928264 CACAATGAAGCATATATCCGACTGA 59.072 40.000 0.00 0.00 0.00 3.41
2725 2788 5.390251 GCACAATGAAGCATATATCCGACTG 60.390 44.000 0.00 0.00 0.00 3.51
2726 2789 4.692625 GCACAATGAAGCATATATCCGACT 59.307 41.667 0.00 0.00 0.00 4.18
2727 2790 4.692625 AGCACAATGAAGCATATATCCGAC 59.307 41.667 5.43 0.00 0.00 4.79
2728 2791 4.898320 AGCACAATGAAGCATATATCCGA 58.102 39.130 5.43 0.00 0.00 4.55
2729 2792 5.618056 AAGCACAATGAAGCATATATCCG 57.382 39.130 5.43 0.00 0.00 4.18
2730 2793 6.971184 GCATAAGCACAATGAAGCATATATCC 59.029 38.462 5.43 0.00 41.58 2.59
2731 2794 7.759465 AGCATAAGCACAATGAAGCATATATC 58.241 34.615 5.43 0.71 45.49 1.63
2732 2795 7.413767 CGAGCATAAGCACAATGAAGCATATAT 60.414 37.037 5.43 0.00 45.49 0.86
2733 2796 6.128472 CGAGCATAAGCACAATGAAGCATATA 60.128 38.462 5.43 0.00 45.49 0.86
2734 2797 5.334646 CGAGCATAAGCACAATGAAGCATAT 60.335 40.000 5.43 1.10 45.49 1.78
2735 2798 4.024641 CGAGCATAAGCACAATGAAGCATA 60.025 41.667 5.43 0.00 45.49 3.14
2736 2799 3.242969 CGAGCATAAGCACAATGAAGCAT 60.243 43.478 5.43 0.00 45.49 3.79
2737 2800 2.096335 CGAGCATAAGCACAATGAAGCA 59.904 45.455 5.43 0.00 45.49 3.91
2738 2801 2.352651 TCGAGCATAAGCACAATGAAGC 59.647 45.455 0.00 0.00 45.49 3.86
2739 2802 4.271776 TCATCGAGCATAAGCACAATGAAG 59.728 41.667 0.00 0.00 45.49 3.02
2740 2803 4.190772 TCATCGAGCATAAGCACAATGAA 58.809 39.130 0.00 0.00 45.49 2.57
2741 2804 3.795877 TCATCGAGCATAAGCACAATGA 58.204 40.909 0.00 0.00 45.49 2.57
2742 2805 4.744136 ATCATCGAGCATAAGCACAATG 57.256 40.909 0.00 0.00 45.49 2.82
2743 2806 6.429078 ACATAATCATCGAGCATAAGCACAAT 59.571 34.615 0.00 0.00 45.49 2.71
2744 2807 5.759763 ACATAATCATCGAGCATAAGCACAA 59.240 36.000 0.00 0.00 45.49 3.33
2745 2808 5.299949 ACATAATCATCGAGCATAAGCACA 58.700 37.500 0.00 0.00 45.49 4.57
2746 2809 5.852738 ACATAATCATCGAGCATAAGCAC 57.147 39.130 0.00 0.00 45.49 4.40
2747 2810 5.334337 GCAACATAATCATCGAGCATAAGCA 60.334 40.000 0.00 0.00 45.49 3.91
2748 2811 5.084722 GCAACATAATCATCGAGCATAAGC 58.915 41.667 0.00 0.00 42.56 3.09
2749 2812 6.075918 GTGCAACATAATCATCGAGCATAAG 58.924 40.000 0.00 0.00 36.32 1.73
2750 2813 5.049474 GGTGCAACATAATCATCGAGCATAA 60.049 40.000 0.00 0.00 39.98 1.90
2751 2814 4.452114 GGTGCAACATAATCATCGAGCATA 59.548 41.667 0.00 0.00 39.98 3.14
2752 2815 3.251729 GGTGCAACATAATCATCGAGCAT 59.748 43.478 0.00 0.00 39.98 3.79
2753 2816 2.613595 GGTGCAACATAATCATCGAGCA 59.386 45.455 0.00 0.00 39.98 4.26
2754 2817 2.874701 AGGTGCAACATAATCATCGAGC 59.125 45.455 3.64 0.00 39.98 5.03
2755 2818 3.496130 GGAGGTGCAACATAATCATCGAG 59.504 47.826 3.64 0.00 39.98 4.04
2756 2819 3.118445 TGGAGGTGCAACATAATCATCGA 60.118 43.478 3.64 0.00 39.98 3.59
2757 2820 3.205338 TGGAGGTGCAACATAATCATCG 58.795 45.455 3.64 0.00 39.98 3.84
2758 2821 4.558095 GCATGGAGGTGCAACATAATCATC 60.558 45.833 3.64 0.00 44.43 2.92
2759 2822 3.319972 GCATGGAGGTGCAACATAATCAT 59.680 43.478 3.64 0.00 44.43 2.45
2760 2823 2.689471 GCATGGAGGTGCAACATAATCA 59.311 45.455 3.64 0.00 44.43 2.57
2761 2824 3.360249 GCATGGAGGTGCAACATAATC 57.640 47.619 3.64 0.00 44.43 1.75
2767 2830 8.708760 ATGATATCATAAGCATGGAGGTGCAAC 61.709 40.741 16.75 0.00 40.11 4.17
2768 2831 6.748908 ATGATATCATAAGCATGGAGGTGCAA 60.749 38.462 16.75 0.00 40.11 4.08
2769 2832 5.280830 ATGATATCATAAGCATGGAGGTGCA 60.281 40.000 16.75 0.00 40.11 4.57
2770 2833 4.582869 TGATATCATAAGCATGGAGGTGC 58.417 43.478 0.00 0.00 45.38 5.01
2771 2834 5.066117 GCATGATATCATAAGCATGGAGGTG 59.934 44.000 17.77 4.05 38.75 4.00
2772 2835 5.045066 AGCATGATATCATAAGCATGGAGGT 60.045 40.000 22.92 10.41 38.75 3.85
2773 2836 5.437946 AGCATGATATCATAAGCATGGAGG 58.562 41.667 22.92 8.68 38.75 4.30
2774 2837 6.113411 TGAGCATGATATCATAAGCATGGAG 58.887 40.000 22.92 9.26 38.75 3.86
2775 2838 6.057321 TGAGCATGATATCATAAGCATGGA 57.943 37.500 22.92 7.21 38.75 3.41
2776 2839 6.944234 ATGAGCATGATATCATAAGCATGG 57.056 37.500 22.92 10.41 38.75 3.66
2787 2850 9.895138 TGCAACTACATTATATGAGCATGATAT 57.105 29.630 0.00 0.00 0.00 1.63
2788 2851 9.895138 ATGCAACTACATTATATGAGCATGATA 57.105 29.630 0.00 0.00 38.59 2.15
2789 2852 8.803397 ATGCAACTACATTATATGAGCATGAT 57.197 30.769 0.00 0.00 38.59 2.45
2790 2853 7.879160 TGATGCAACTACATTATATGAGCATGA 59.121 33.333 0.00 0.00 39.94 3.07
2791 2854 8.036273 TGATGCAACTACATTATATGAGCATG 57.964 34.615 0.00 0.00 39.94 4.06
2792 2855 8.674607 CATGATGCAACTACATTATATGAGCAT 58.325 33.333 0.00 0.00 42.23 3.79
2793 2856 7.662669 ACATGATGCAACTACATTATATGAGCA 59.337 33.333 0.00 0.00 0.00 4.26
2794 2857 8.037382 ACATGATGCAACTACATTATATGAGC 57.963 34.615 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.