Multiple sequence alignment - TraesCS5B01G211100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G211100 chr5B 100.000 8127 0 0 1 8127 382068691 382076817 0.000000e+00 15008.0
1 TraesCS5B01G211100 chr5B 87.097 744 91 4 4 743 556191572 556192314 0.000000e+00 837.0
2 TraesCS5B01G211100 chr5B 78.198 555 99 12 1836 2372 14190102 14189552 1.310000e-87 335.0
3 TraesCS5B01G211100 chr5A 93.994 4096 218 17 909 4984 427833758 427829671 0.000000e+00 6176.0
4 TraesCS5B01G211100 chr5A 93.717 939 55 3 6119 7054 427826956 427826019 0.000000e+00 1404.0
5 TraesCS5B01G211100 chr5A 96.008 526 20 1 5000 5524 427829688 427829163 0.000000e+00 854.0
6 TraesCS5B01G211100 chr5A 88.734 719 47 17 7167 7873 427825806 427825110 0.000000e+00 848.0
7 TraesCS5B01G211100 chr5A 93.917 411 24 1 5525 5935 427829079 427828670 3.220000e-173 619.0
8 TraesCS5B01G211100 chr5A 95.402 87 4 0 6029 6115 427828671 427828585 1.100000e-28 139.0
9 TraesCS5B01G211100 chr5D 95.705 3213 116 8 909 4106 328703965 328707170 0.000000e+00 5149.0
10 TraesCS5B01G211100 chr5D 98.506 937 13 1 5000 5935 328713289 328714225 0.000000e+00 1652.0
11 TraesCS5B01G211100 chr5D 97.860 888 14 4 4102 4985 328712421 328713307 0.000000e+00 1530.0
12 TraesCS5B01G211100 chr5D 93.121 974 42 9 6029 6998 328714224 328715176 0.000000e+00 1404.0
13 TraesCS5B01G211100 chr5D 89.836 915 42 20 6993 7873 328719865 328720762 0.000000e+00 1127.0
14 TraesCS5B01G211100 chr5D 93.182 88 6 0 744 831 328702915 328703002 6.620000e-26 130.0
15 TraesCS5B01G211100 chr5D 81.308 107 6 7 806 903 328703838 328703939 3.150000e-09 75.0
16 TraesCS5B01G211100 chr4B 88.156 743 80 5 3 743 559742463 559741727 0.000000e+00 878.0
17 TraesCS5B01G211100 chr4B 87.349 743 88 3 3 743 559755030 559754292 0.000000e+00 846.0
18 TraesCS5B01G211100 chr4B 95.050 101 4 1 5930 6030 51475846 51475945 3.040000e-34 158.0
19 TraesCS5B01G211100 chr4B 91.111 90 8 0 7900 7989 17039976 17040065 1.110000e-23 122.0
20 TraesCS5B01G211100 chr6B 87.166 748 88 6 1 743 469100486 469101230 0.000000e+00 843.0
21 TraesCS5B01G211100 chr6B 87.084 751 89 5 3 746 629977158 629977907 0.000000e+00 843.0
22 TraesCS5B01G211100 chr6B 94.949 99 5 0 5934 6032 76858214 76858312 1.090000e-33 156.0
23 TraesCS5B01G211100 chr6B 94.118 102 5 1 5930 6031 288708080 288707980 3.930000e-33 154.0
24 TraesCS5B01G211100 chr1B 87.214 743 91 4 3 743 274575975 274576715 0.000000e+00 843.0
25 TraesCS5B01G211100 chr1B 87.049 749 90 4 3 749 155685179 155684436 0.000000e+00 839.0
26 TraesCS5B01G211100 chr1B 87.079 743 91 2 2 743 529103214 529102476 0.000000e+00 835.0
27 TraesCS5B01G211100 chr3B 86.933 750 93 5 3 748 552073311 552072563 0.000000e+00 837.0
28 TraesCS5B01G211100 chr3B 96.907 97 3 0 5934 6030 674424194 674424290 6.530000e-36 163.0
29 TraesCS5B01G211100 chrUn 100.000 392 0 0 5102 5493 479762046 479761655 0.000000e+00 725.0
30 TraesCS5B01G211100 chr1A 92.143 140 11 0 7986 8125 352863454 352863315 1.790000e-46 198.0
31 TraesCS5B01G211100 chr2D 97.000 100 3 0 5934 6033 30406648 30406747 1.400000e-37 169.0
32 TraesCS5B01G211100 chr7D 95.050 101 5 0 5931 6031 80971198 80971098 8.440000e-35 159.0
33 TraesCS5B01G211100 chr7D 95.050 101 4 1 5930 6030 529049355 529049454 3.040000e-34 158.0
34 TraesCS5B01G211100 chr7D 91.667 84 7 0 8037 8120 92639953 92639870 5.150000e-22 117.0
35 TraesCS5B01G211100 chr7B 94.175 103 5 1 5929 6030 641705267 641705369 1.090000e-33 156.0
36 TraesCS5B01G211100 chr7B 91.667 108 9 0 5925 6032 479817367 479817260 5.080000e-32 150.0
37 TraesCS5B01G211100 chr4A 86.905 84 11 0 7900 7983 686897542 686897459 2.410000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G211100 chr5B 382068691 382076817 8126 False 15008.000000 15008 100.000000 1 8127 1 chr5B.!!$F1 8126
1 TraesCS5B01G211100 chr5B 556191572 556192314 742 False 837.000000 837 87.097000 4 743 1 chr5B.!!$F2 739
2 TraesCS5B01G211100 chr5B 14189552 14190102 550 True 335.000000 335 78.198000 1836 2372 1 chr5B.!!$R1 536
3 TraesCS5B01G211100 chr5A 427825110 427833758 8648 True 1673.333333 6176 93.628667 909 7873 6 chr5A.!!$R1 6964
4 TraesCS5B01G211100 chr5D 328702915 328707170 4255 False 1784.666667 5149 90.065000 744 4106 3 chr5D.!!$F2 3362
5 TraesCS5B01G211100 chr5D 328712421 328715176 2755 False 1528.666667 1652 96.495667 4102 6998 3 chr5D.!!$F3 2896
6 TraesCS5B01G211100 chr5D 328719865 328720762 897 False 1127.000000 1127 89.836000 6993 7873 1 chr5D.!!$F1 880
7 TraesCS5B01G211100 chr4B 559741727 559742463 736 True 878.000000 878 88.156000 3 743 1 chr4B.!!$R1 740
8 TraesCS5B01G211100 chr4B 559754292 559755030 738 True 846.000000 846 87.349000 3 743 1 chr4B.!!$R2 740
9 TraesCS5B01G211100 chr6B 469100486 469101230 744 False 843.000000 843 87.166000 1 743 1 chr6B.!!$F2 742
10 TraesCS5B01G211100 chr6B 629977158 629977907 749 False 843.000000 843 87.084000 3 746 1 chr6B.!!$F3 743
11 TraesCS5B01G211100 chr1B 274575975 274576715 740 False 843.000000 843 87.214000 3 743 1 chr1B.!!$F1 740
12 TraesCS5B01G211100 chr1B 155684436 155685179 743 True 839.000000 839 87.049000 3 749 1 chr1B.!!$R1 746
13 TraesCS5B01G211100 chr1B 529102476 529103214 738 True 835.000000 835 87.079000 2 743 1 chr1B.!!$R2 741
14 TraesCS5B01G211100 chr3B 552072563 552073311 748 True 837.000000 837 86.933000 3 748 1 chr3B.!!$R1 745

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
54 55 0.175989 GGGACGAGTCTTCATCCACC 59.824 60.000 3.09 0.0 32.45 4.61 F
251 252 0.460722 TCCTGACGACCGACAAAACA 59.539 50.000 0.00 0.0 0.00 2.83 F
1402 2319 1.006571 GAGGGCAACGAAGTGACGA 60.007 57.895 0.00 0.0 45.00 4.20 F
1599 2516 1.002403 TGAAGAGGCGGATGGGGTA 59.998 57.895 0.00 0.0 0.00 3.69 F
1640 2557 1.229336 CTGAGGAGAGGGTGGTGGT 60.229 63.158 0.00 0.0 0.00 4.16 F
1737 2654 2.500098 TCGATCCGAGACCCAAAAGAAT 59.500 45.455 0.00 0.0 0.00 2.40 F
2627 3559 0.106521 GGGCTGTTGGCAATTTGTGT 59.893 50.000 1.92 0.0 44.01 3.72 F
2629 3561 1.202510 GGCTGTTGGCAATTTGTGTCA 60.203 47.619 1.92 0.0 41.14 3.58 F
2631 3563 2.477375 GCTGTTGGCAATTTGTGTCATG 59.523 45.455 1.92 0.0 42.79 3.07 F
3458 4392 2.730382 TGTCCTTCATACGCTAGTGGA 58.270 47.619 8.42 0.0 0.00 4.02 F
4846 5788 2.094675 CTTCCGAGATGGCCAACAATT 58.905 47.619 10.96 0.0 37.80 2.32 F
6796 9450 0.250467 TGCAGAGTGAAGGTGAAGCC 60.250 55.000 0.00 0.0 37.58 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 2510 0.045008 TACAAGCCCTGGATACCCCA 59.955 55.000 0.00 0.00 44.25 4.96 R
1599 2516 0.466189 CCGCATTACAAGCCCTGGAT 60.466 55.000 0.00 0.00 0.00 3.41 R
2542 3474 3.215151 TCTATCAACTCGACTAGGCAGG 58.785 50.000 0.00 0.00 0.00 4.85 R
2622 3554 4.095632 ACATGACACGAAAACATGACACAA 59.904 37.500 17.47 0.00 42.41 3.33 R
2625 3557 4.891627 AACATGACACGAAAACATGACA 57.108 36.364 17.47 1.16 42.41 3.58 R
2631 3563 5.395486 GCTTGAGTTAACATGACACGAAAAC 59.605 40.000 8.61 0.00 0.00 2.43 R
3838 4773 1.808411 TTGCTAAAGAACAGCCTCGG 58.192 50.000 0.00 0.00 38.29 4.63 R
4048 4985 2.648059 AGCTCCATGAACATTACAGCC 58.352 47.619 0.00 0.00 0.00 4.85 R
4145 5082 3.199677 AGCTAAGCACACGTGTTGTTTA 58.800 40.909 20.79 19.30 35.67 2.01 R
5012 5955 2.301870 TGGCAGATTGGTCGTAGAAACT 59.698 45.455 0.00 0.00 39.69 2.66 R
6802 9456 0.391661 ACGGGTATCAGCACAGCAAG 60.392 55.000 0.00 0.00 0.00 4.01 R
8106 10932 0.383231 CGAGGGAAAGCATTCATGGC 59.617 55.000 3.82 0.00 37.29 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 0.175989 GGGACGAGTCTTCATCCACC 59.824 60.000 3.09 0.00 32.45 4.61
66 67 3.006061 ATCCACCGATGACCAAGGA 57.994 52.632 0.00 0.00 0.00 3.36
213 214 1.371881 GACGGAGCGCCACTATAGC 60.372 63.158 7.44 0.00 0.00 2.97
214 215 2.071844 GACGGAGCGCCACTATAGCA 62.072 60.000 7.44 0.00 0.00 3.49
221 222 0.663688 CGCCACTATAGCAGACTCGT 59.336 55.000 0.00 0.00 0.00 4.18
241 242 0.951040 CTTGGCCACTTCCTGACGAC 60.951 60.000 3.88 0.00 0.00 4.34
251 252 0.460722 TCCTGACGACCGACAAAACA 59.539 50.000 0.00 0.00 0.00 2.83
271 272 4.162690 GCACAGTCCCCCTAGGCG 62.163 72.222 2.05 0.00 34.51 5.52
385 386 8.447833 CACAAACTCGTAACATTACCATTGTAT 58.552 33.333 0.00 0.00 0.00 2.29
397 399 2.140224 CCATTGTATCCCTGGGGGTTA 58.860 52.381 14.00 0.00 44.74 2.85
432 435 2.494918 GAGCCCTCGCGTACACAT 59.505 61.111 5.77 0.00 41.18 3.21
443 450 2.918600 CGCGTACACATGCAAGTAAGTA 59.081 45.455 0.00 0.00 36.39 2.24
444 451 3.001070 CGCGTACACATGCAAGTAAGTAG 60.001 47.826 0.00 0.00 36.39 2.57
445 452 3.306166 GCGTACACATGCAAGTAAGTAGG 59.694 47.826 0.00 1.45 36.63 3.18
446 453 4.740268 CGTACACATGCAAGTAAGTAGGA 58.260 43.478 0.00 0.00 0.00 2.94
486 501 3.263425 CCACCCATTAGTAGAACACACCT 59.737 47.826 0.00 0.00 0.00 4.00
488 503 3.263425 ACCCATTAGTAGAACACACCTGG 59.737 47.826 0.00 0.00 0.00 4.45
489 504 3.517901 CCCATTAGTAGAACACACCTGGA 59.482 47.826 0.00 0.00 0.00 3.86
490 505 4.019681 CCCATTAGTAGAACACACCTGGAA 60.020 45.833 0.00 0.00 0.00 3.53
532 547 1.352687 GGCCAGTTCTCCTTCTTCCTT 59.647 52.381 0.00 0.00 0.00 3.36
556 571 2.609747 ACAACTCCAGGAGCAACTCTA 58.390 47.619 17.31 0.00 32.04 2.43
596 611 1.229359 CTCGGCAGGACTAGGGGTA 59.771 63.158 0.00 0.00 0.00 3.69
660 675 2.437359 GCTCGCTCATGCCAACCT 60.437 61.111 0.00 0.00 35.36 3.50
674 689 3.914551 AACCTCGCCTCTGGAGCCT 62.915 63.158 0.00 0.00 0.00 4.58
689 704 2.656069 GCCTACCAGTGCCCTCGAA 61.656 63.158 0.00 0.00 0.00 3.71
707 722 3.010361 TCGAACCTCCTCCTCTCTTTAGT 59.990 47.826 0.00 0.00 0.00 2.24
711 727 4.954089 ACCTCCTCCTCTCTTTAGTCATT 58.046 43.478 0.00 0.00 0.00 2.57
717 733 5.130145 CCTCCTCTCTTTAGTCATTCCATGT 59.870 44.000 0.00 0.00 0.00 3.21
749 765 1.372499 CCCACCACGACACACTACG 60.372 63.158 0.00 0.00 0.00 3.51
782 798 1.681793 GGGAGTATCTAGCGTGCTTCA 59.318 52.381 0.00 0.00 33.73 3.02
786 802 4.446051 GGAGTATCTAGCGTGCTTCATTTC 59.554 45.833 0.00 0.00 33.73 2.17
807 823 6.380095 TTCACGCTTTTACCTGTAAAATGT 57.620 33.333 13.83 12.57 42.17 2.71
814 830 8.077386 CGCTTTTACCTGTAAAATGTTCCTAAA 58.923 33.333 13.83 0.00 42.17 1.85
833 849 9.753674 TTCCTAAATGAATAAAATCTCACAGGT 57.246 29.630 0.00 0.00 0.00 4.00
838 1724 7.921786 ATGAATAAAATCTCACAGGTTCGAA 57.078 32.000 0.00 0.00 0.00 3.71
840 1726 8.160521 TGAATAAAATCTCACAGGTTCGAAAA 57.839 30.769 0.00 0.00 0.00 2.29
845 1731 4.665833 TCTCACAGGTTCGAAAAAGAGA 57.334 40.909 0.00 6.22 0.00 3.10
857 1743 4.827284 TCGAAAAAGAGAGAGGCCAAAATT 59.173 37.500 5.01 0.00 0.00 1.82
862 1748 2.758979 AGAGAGAGGCCAAAATTGCATG 59.241 45.455 5.01 0.00 0.00 4.06
863 1749 1.829222 AGAGAGGCCAAAATTGCATGG 59.171 47.619 5.01 0.00 39.80 3.66
964 1871 2.672874 GCGCCCTTTTCCATTTCATTTC 59.327 45.455 0.00 0.00 0.00 2.17
984 1891 1.134175 CGAAATAGCCACGGCCAAAAT 59.866 47.619 2.24 0.00 43.17 1.82
1024 1932 1.077169 GTTCCTCACCCAATTCCCCTT 59.923 52.381 0.00 0.00 0.00 3.95
1097 2005 3.077556 CTCCACCTCCACCTCCCG 61.078 72.222 0.00 0.00 0.00 5.14
1164 2072 1.134075 CGACGACGACGACTTCCAT 59.866 57.895 15.32 0.00 42.66 3.41
1269 2177 2.362120 CCGTCACCCTACTCCGGT 60.362 66.667 0.00 0.00 34.10 5.28
1297 2214 4.966787 GCCCCGTTGCCAGTTCCA 62.967 66.667 0.00 0.00 0.00 3.53
1320 2237 2.143925 GAGAGTGTTGTTACAGTGGCC 58.856 52.381 0.00 0.00 38.05 5.36
1402 2319 1.006571 GAGGGCAACGAAGTGACGA 60.007 57.895 0.00 0.00 45.00 4.20
1413 2330 2.352814 CGAAGTGACGAGTGGAGGAATT 60.353 50.000 0.00 0.00 35.09 2.17
1526 2443 2.555199 CAGTAGCTTCCCCAATTCGAG 58.445 52.381 0.00 0.00 0.00 4.04
1555 2472 1.673920 GTGTTTTGGAGTCAGGCGAAA 59.326 47.619 0.00 0.00 0.00 3.46
1569 2486 2.495669 AGGCGAAACATGTAATTTGGGG 59.504 45.455 0.00 0.00 0.00 4.96
1593 2510 1.519719 GCACTCTGAAGAGGCGGAT 59.480 57.895 11.87 0.00 46.13 4.18
1599 2516 1.002403 TGAAGAGGCGGATGGGGTA 59.998 57.895 0.00 0.00 0.00 3.69
1621 2538 1.680555 CCAGGGCTTGTAATGCGGTTA 60.681 52.381 0.00 0.00 37.98 2.85
1640 2557 1.229336 CTGAGGAGAGGGTGGTGGT 60.229 63.158 0.00 0.00 0.00 4.16
1644 2561 3.330720 GAGAGGGTGGTGGTGGGG 61.331 72.222 0.00 0.00 0.00 4.96
1666 2583 3.321039 AGATCTGGTTCATGGCTCCATA 58.679 45.455 0.37 0.00 34.91 2.74
1737 2654 2.500098 TCGATCCGAGACCCAAAAGAAT 59.500 45.455 0.00 0.00 0.00 2.40
1772 2689 3.557577 TGAAGTTCATGACGGCAATTG 57.442 42.857 0.00 0.00 0.00 2.32
1787 2704 2.961062 GCAATTGCCCCTCATGTTCTAT 59.039 45.455 20.06 0.00 34.31 1.98
1790 2707 5.380043 CAATTGCCCCTCATGTTCTATAGT 58.620 41.667 0.00 0.00 0.00 2.12
1821 2738 6.095021 AGCTTTTAGTCCCGGATTCAAAATAC 59.905 38.462 0.73 0.49 0.00 1.89
1959 2881 3.054508 CCAGGGAGAAGAAATCAAGCTCT 60.055 47.826 0.00 0.00 0.00 4.09
1982 2904 7.228507 CTCTACTGCAGATTGTGTAGAGTATCT 59.771 40.741 23.35 0.00 46.60 1.98
2173 3105 4.819610 AGGGAATAAAATGGATTCTGGGG 58.180 43.478 0.00 0.00 34.36 4.96
2622 3554 2.573083 CGTGGGGCTGTTGGCAATT 61.573 57.895 1.92 0.00 44.01 2.32
2625 3557 1.053264 TGGGGCTGTTGGCAATTTGT 61.053 50.000 1.92 0.00 44.01 2.83
2627 3559 0.106521 GGGCTGTTGGCAATTTGTGT 59.893 50.000 1.92 0.00 44.01 3.72
2629 3561 1.202510 GGCTGTTGGCAATTTGTGTCA 60.203 47.619 1.92 0.00 41.14 3.58
2631 3563 2.477375 GCTGTTGGCAATTTGTGTCATG 59.523 45.455 1.92 0.00 42.79 3.07
2830 3764 5.488919 TCCTAATCATGAAAGAGGACCTTGT 59.511 40.000 15.96 0.00 34.79 3.16
3341 4275 2.969990 ACTAGCAGAAGTCGTACTCGA 58.030 47.619 0.00 0.00 44.12 4.04
3458 4392 2.730382 TGTCCTTCATACGCTAGTGGA 58.270 47.619 8.42 0.00 0.00 4.02
3838 4773 4.762251 GCCCCTATGACTTTATGAACATCC 59.238 45.833 0.00 0.00 0.00 3.51
4075 5012 4.558226 AATGTTCATGGAGCTACAGTCA 57.442 40.909 4.19 1.10 0.00 3.41
4127 5064 8.535335 ACCTAATCAGAATATACTGGTGCATAG 58.465 37.037 0.00 0.00 38.31 2.23
4846 5788 2.094675 CTTCCGAGATGGCCAACAATT 58.905 47.619 10.96 0.00 37.80 2.32
4984 5927 8.121086 GTGTTACCAAAGTTAGAGTTGAGTTTC 58.879 37.037 0.00 0.00 0.00 2.78
4985 5928 7.281549 TGTTACCAAAGTTAGAGTTGAGTTTCC 59.718 37.037 0.00 0.00 0.00 3.13
4986 5929 6.002653 ACCAAAGTTAGAGTTGAGTTTCCT 57.997 37.500 0.00 0.00 0.00 3.36
4987 5930 6.424032 ACCAAAGTTAGAGTTGAGTTTCCTT 58.576 36.000 0.00 0.00 0.00 3.36
4988 5931 6.890268 ACCAAAGTTAGAGTTGAGTTTCCTTT 59.110 34.615 0.00 0.00 0.00 3.11
4989 5932 7.067129 ACCAAAGTTAGAGTTGAGTTTCCTTTC 59.933 37.037 0.00 0.00 0.00 2.62
4990 5933 7.067008 CCAAAGTTAGAGTTGAGTTTCCTTTCA 59.933 37.037 0.00 0.00 0.00 2.69
4991 5934 8.458843 CAAAGTTAGAGTTGAGTTTCCTTTCAA 58.541 33.333 0.00 0.00 0.00 2.69
4992 5935 8.575649 AAGTTAGAGTTGAGTTTCCTTTCAAA 57.424 30.769 0.00 0.00 35.29 2.69
4993 5936 8.575649 AGTTAGAGTTGAGTTTCCTTTCAAAA 57.424 30.769 0.00 0.00 35.29 2.44
4994 5937 9.020731 AGTTAGAGTTGAGTTTCCTTTCAAAAA 57.979 29.630 0.00 0.00 35.29 1.94
5050 5993 5.218885 TCTGCCATTAATTTTTCACACACG 58.781 37.500 0.00 0.00 0.00 4.49
5538 6565 7.436376 TCTCAAAGCTATTATCGTTCATCAGTG 59.564 37.037 0.00 0.00 0.00 3.66
5745 6772 3.328382 TTCCCATGTTCCTTAGTGTCG 57.672 47.619 0.00 0.00 0.00 4.35
5918 6945 7.121315 GTCCTGGAATTGCTTAACTGATACTTT 59.879 37.037 0.00 0.00 0.00 2.66
5935 6962 8.974060 TGATACTTTCCCCTGTTCAATATTAC 57.026 34.615 0.00 0.00 0.00 1.89
5936 6963 8.778059 TGATACTTTCCCCTGTTCAATATTACT 58.222 33.333 0.00 0.00 0.00 2.24
5937 6964 9.274206 GATACTTTCCCCTGTTCAATATTACTC 57.726 37.037 0.00 0.00 0.00 2.59
5938 6965 6.113411 ACTTTCCCCTGTTCAATATTACTCG 58.887 40.000 0.00 0.00 0.00 4.18
5939 6966 4.067972 TCCCCTGTTCAATATTACTCGC 57.932 45.455 0.00 0.00 0.00 5.03
5940 6967 3.709653 TCCCCTGTTCAATATTACTCGCT 59.290 43.478 0.00 0.00 0.00 4.93
5941 6968 4.163458 TCCCCTGTTCAATATTACTCGCTT 59.837 41.667 0.00 0.00 0.00 4.68
5942 6969 4.511826 CCCCTGTTCAATATTACTCGCTTC 59.488 45.833 0.00 0.00 0.00 3.86
5943 6970 4.209288 CCCTGTTCAATATTACTCGCTTCG 59.791 45.833 0.00 0.00 0.00 3.79
5944 6971 4.804139 CCTGTTCAATATTACTCGCTTCGT 59.196 41.667 0.00 0.00 0.00 3.85
5945 6972 5.051641 CCTGTTCAATATTACTCGCTTCGTC 60.052 44.000 0.00 0.00 0.00 4.20
5946 6973 4.802039 TGTTCAATATTACTCGCTTCGTCC 59.198 41.667 0.00 0.00 0.00 4.79
5947 6974 3.973657 TCAATATTACTCGCTTCGTCCC 58.026 45.455 0.00 0.00 0.00 4.46
5948 6975 3.382227 TCAATATTACTCGCTTCGTCCCA 59.618 43.478 0.00 0.00 0.00 4.37
5949 6976 4.116961 CAATATTACTCGCTTCGTCCCAA 58.883 43.478 0.00 0.00 0.00 4.12
5950 6977 2.754946 ATTACTCGCTTCGTCCCAAA 57.245 45.000 0.00 0.00 0.00 3.28
5951 6978 2.529780 TTACTCGCTTCGTCCCAAAA 57.470 45.000 0.00 0.00 0.00 2.44
5952 6979 2.754946 TACTCGCTTCGTCCCAAAAT 57.245 45.000 0.00 0.00 0.00 1.82
5953 6980 2.754946 ACTCGCTTCGTCCCAAAATA 57.245 45.000 0.00 0.00 0.00 1.40
5954 6981 3.048337 ACTCGCTTCGTCCCAAAATAA 57.952 42.857 0.00 0.00 0.00 1.40
5955 6982 2.740447 ACTCGCTTCGTCCCAAAATAAC 59.260 45.455 0.00 0.00 0.00 1.89
5956 6983 3.000727 CTCGCTTCGTCCCAAAATAACT 58.999 45.455 0.00 0.00 0.00 2.24
5957 6984 2.739913 TCGCTTCGTCCCAAAATAACTG 59.260 45.455 0.00 0.00 0.00 3.16
5958 6985 2.482721 CGCTTCGTCCCAAAATAACTGT 59.517 45.455 0.00 0.00 0.00 3.55
5959 6986 3.424433 CGCTTCGTCCCAAAATAACTGTC 60.424 47.826 0.00 0.00 0.00 3.51
5960 6987 3.751698 GCTTCGTCCCAAAATAACTGTCT 59.248 43.478 0.00 0.00 0.00 3.41
5961 6988 4.215613 GCTTCGTCCCAAAATAACTGTCTT 59.784 41.667 0.00 0.00 0.00 3.01
5962 6989 5.410439 GCTTCGTCCCAAAATAACTGTCTTA 59.590 40.000 0.00 0.00 0.00 2.10
5963 6990 6.072893 GCTTCGTCCCAAAATAACTGTCTTAA 60.073 38.462 0.00 0.00 0.00 1.85
5964 6991 7.429636 TTCGTCCCAAAATAACTGTCTTAAG 57.570 36.000 0.00 0.00 0.00 1.85
5965 6992 5.410439 TCGTCCCAAAATAACTGTCTTAAGC 59.590 40.000 0.00 0.00 0.00 3.09
5966 6993 5.411669 CGTCCCAAAATAACTGTCTTAAGCT 59.588 40.000 0.00 0.00 0.00 3.74
5967 6994 6.072673 CGTCCCAAAATAACTGTCTTAAGCTT 60.073 38.462 3.48 3.48 0.00 3.74
5968 6995 7.118680 CGTCCCAAAATAACTGTCTTAAGCTTA 59.881 37.037 0.86 0.86 0.00 3.09
5969 6996 8.451748 GTCCCAAAATAACTGTCTTAAGCTTAG 58.548 37.037 6.24 0.00 0.00 2.18
5970 6997 8.161425 TCCCAAAATAACTGTCTTAAGCTTAGT 58.839 33.333 6.24 0.00 0.00 2.24
5971 6998 9.444600 CCCAAAATAACTGTCTTAAGCTTAGTA 57.555 33.333 6.24 0.00 0.00 1.82
5978 7005 8.959705 AACTGTCTTAAGCTTAGTACAACTTT 57.040 30.769 18.24 11.70 0.00 2.66
5979 7006 8.366671 ACTGTCTTAAGCTTAGTACAACTTTG 57.633 34.615 18.24 11.67 0.00 2.77
5980 7007 7.985752 ACTGTCTTAAGCTTAGTACAACTTTGT 59.014 33.333 18.24 12.12 44.86 2.83
5981 7008 9.472361 CTGTCTTAAGCTTAGTACAACTTTGTA 57.528 33.333 18.24 0.00 42.35 2.41
6005 7032 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
6006 7033 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
6007 7034 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
6008 7035 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
6009 7036 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
6010 7037 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
6011 7038 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
6012 7039 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
6013 7040 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
6016 7043 9.391006 AGTACAAAGTTGAGACACTTATTTTGA 57.609 29.630 0.00 0.00 35.87 2.69
6017 7044 9.651718 GTACAAAGTTGAGACACTTATTTTGAG 57.348 33.333 0.00 0.00 35.87 3.02
6018 7045 8.506168 ACAAAGTTGAGACACTTATTTTGAGA 57.494 30.769 0.00 0.00 35.87 3.27
6019 7046 9.125026 ACAAAGTTGAGACACTTATTTTGAGAT 57.875 29.630 0.00 0.00 35.87 2.75
6020 7047 9.390795 CAAAGTTGAGACACTTATTTTGAGATG 57.609 33.333 0.00 0.00 35.87 2.90
6021 7048 7.678947 AGTTGAGACACTTATTTTGAGATGG 57.321 36.000 0.00 0.00 0.00 3.51
6022 7049 7.453393 AGTTGAGACACTTATTTTGAGATGGA 58.547 34.615 0.00 0.00 0.00 3.41
6023 7050 7.605691 AGTTGAGACACTTATTTTGAGATGGAG 59.394 37.037 0.00 0.00 0.00 3.86
6024 7051 6.409704 TGAGACACTTATTTTGAGATGGAGG 58.590 40.000 0.00 0.00 0.00 4.30
6025 7052 5.749462 AGACACTTATTTTGAGATGGAGGG 58.251 41.667 0.00 0.00 0.00 4.30
6026 7053 5.488919 AGACACTTATTTTGAGATGGAGGGA 59.511 40.000 0.00 0.00 0.00 4.20
6027 7054 5.749462 ACACTTATTTTGAGATGGAGGGAG 58.251 41.667 0.00 0.00 0.00 4.30
6088 7115 4.037446 TCCAACATGCAACTTTGGTAGTTC 59.963 41.667 18.72 0.00 45.29 3.01
6400 9052 6.427853 AGCATTCTTTTGGGCAAAACTAAATC 59.572 34.615 0.00 0.00 35.57 2.17
6414 9066 7.411274 CAAAACTAAATCCAACGTTGTCTACA 58.589 34.615 25.63 8.04 0.00 2.74
6434 9086 8.404000 GTCTACACATTAGAGAAAACGGAGATA 58.596 37.037 0.00 0.00 0.00 1.98
6438 9090 9.099454 ACACATTAGAGAAAACGGAGATATTTC 57.901 33.333 0.00 0.00 34.14 2.17
6483 9137 7.883311 TGAAGTTATTTTCACAAAACCCCAAAA 59.117 29.630 0.00 0.00 32.39 2.44
6486 9140 2.674796 TTCACAAAACCCCAAAACCG 57.325 45.000 0.00 0.00 0.00 4.44
6529 9183 5.794894 TCTGGGTTGATTCTGAAGTTCTAC 58.205 41.667 4.17 0.00 0.00 2.59
6778 9432 7.395190 TCACCTAAATGAATGTCCAAAGATG 57.605 36.000 0.00 0.00 0.00 2.90
6796 9450 0.250467 TGCAGAGTGAAGGTGAAGCC 60.250 55.000 0.00 0.00 37.58 4.35
6802 9456 0.315251 GTGAAGGTGAAGCCCTTTGC 59.685 55.000 0.00 0.00 44.91 3.68
6816 9470 1.814394 CCTTTGCTTGCTGTGCTGATA 59.186 47.619 0.00 0.00 0.00 2.15
6823 9477 0.899019 TGCTGTGCTGATACCCGTAA 59.101 50.000 0.00 0.00 0.00 3.18
6830 9484 4.081365 TGTGCTGATACCCGTAATTTCTGA 60.081 41.667 0.00 0.00 0.00 3.27
6833 9487 4.452455 GCTGATACCCGTAATTTCTGATGG 59.548 45.833 0.00 0.00 0.00 3.51
6834 9488 4.385825 TGATACCCGTAATTTCTGATGGC 58.614 43.478 0.00 0.00 0.00 4.40
6876 9530 3.758300 CACCAAATGCTCGATGGTAAAC 58.242 45.455 7.30 0.00 45.45 2.01
6905 9559 2.504681 GCAATTGCGGCACCGAAG 60.505 61.111 15.87 0.00 42.83 3.79
7044 9701 4.588951 TCGGGCTATGTGAGTGAATATTCT 59.411 41.667 16.24 0.00 0.00 2.40
7059 9716 8.634444 AGTGAATATTCTTAAGTACTCGCTCAT 58.366 33.333 16.24 0.00 0.00 2.90
7060 9717 9.894783 GTGAATATTCTTAAGTACTCGCTCATA 57.105 33.333 16.24 0.00 0.00 2.15
7124 9895 1.774639 TTCAGTTCGCGGTCAAGTAC 58.225 50.000 6.13 0.00 0.00 2.73
7125 9896 0.669619 TCAGTTCGCGGTCAAGTACA 59.330 50.000 6.13 0.00 0.00 2.90
7126 9897 1.060713 CAGTTCGCGGTCAAGTACAG 58.939 55.000 6.13 0.00 0.00 2.74
7127 9898 0.672342 AGTTCGCGGTCAAGTACAGT 59.328 50.000 6.13 0.00 0.00 3.55
7128 9899 1.881973 AGTTCGCGGTCAAGTACAGTA 59.118 47.619 6.13 0.00 0.00 2.74
7222 10011 5.295787 GTCTGCAATCCATCCGTAACATTTA 59.704 40.000 0.00 0.00 0.00 1.40
7274 10065 0.037590 AGCCGCCCATACAGACAAAA 59.962 50.000 0.00 0.00 0.00 2.44
7334 10126 1.762460 TCCGGGAGCCAGAATCCTC 60.762 63.158 0.00 0.00 37.01 3.71
7362 10170 1.379044 CATCCGGCAGCCTCCTTTT 60.379 57.895 10.54 0.00 0.00 2.27
7447 10258 3.391382 CTCCCCGAACCCTCGCTT 61.391 66.667 0.00 0.00 44.04 4.68
7449 10260 4.814294 CCCCGAACCCTCGCTTCG 62.814 72.222 0.00 0.00 44.04 3.79
7458 10271 1.309499 CCCTCGCTTCGTCACTCTCT 61.309 60.000 0.00 0.00 0.00 3.10
7460 10273 0.098025 CTCGCTTCGTCACTCTCTCC 59.902 60.000 0.00 0.00 0.00 3.71
7464 10277 1.953311 GCTTCGTCACTCTCTCCCTCT 60.953 57.143 0.00 0.00 0.00 3.69
7545 10370 2.434359 CGCTTCGTTGGGTCTCCC 60.434 66.667 0.00 0.00 45.71 4.30
7555 10380 1.380112 GGGTCTCCCGTAGCTCACT 60.380 63.158 0.00 0.00 32.13 3.41
7557 10382 0.966370 GGTCTCCCGTAGCTCACTGT 60.966 60.000 0.00 0.00 0.00 3.55
7564 10389 2.263077 CCGTAGCTCACTGTGTGATTC 58.737 52.381 13.56 4.57 41.94 2.52
7573 10398 2.032290 CACTGTGTGATTCTGTGTGCTG 60.032 50.000 0.00 0.00 35.23 4.41
7574 10399 2.216046 CTGTGTGATTCTGTGTGCTGT 58.784 47.619 0.00 0.00 0.00 4.40
7575 10400 2.615447 CTGTGTGATTCTGTGTGCTGTT 59.385 45.455 0.00 0.00 0.00 3.16
7576 10401 2.355444 TGTGTGATTCTGTGTGCTGTTG 59.645 45.455 0.00 0.00 0.00 3.33
7577 10402 1.948834 TGTGATTCTGTGTGCTGTTGG 59.051 47.619 0.00 0.00 0.00 3.77
7578 10403 0.953727 TGATTCTGTGTGCTGTTGGC 59.046 50.000 0.00 0.00 42.22 4.52
7579 10404 0.110056 GATTCTGTGTGCTGTTGGCG 60.110 55.000 0.00 0.00 45.43 5.69
7580 10405 1.518056 ATTCTGTGTGCTGTTGGCGG 61.518 55.000 0.00 0.00 45.43 6.13
7596 10421 2.047179 GGTTGGTCTCGGCAGGAC 60.047 66.667 0.00 0.00 0.00 3.85
7615 10441 1.227234 CATGGCGTCGGTGCATCTA 60.227 57.895 0.00 0.00 36.28 1.98
7801 10627 2.173519 CTGGGCCACAAATTGTCAGAT 58.826 47.619 0.00 0.00 0.00 2.90
7802 10628 1.894466 TGGGCCACAAATTGTCAGATG 59.106 47.619 0.00 0.00 0.00 2.90
7803 10629 1.404583 GGGCCACAAATTGTCAGATGC 60.405 52.381 4.39 0.00 0.00 3.91
7807 10633 3.428045 GCCACAAATTGTCAGATGCTACC 60.428 47.826 0.00 0.00 0.00 3.18
7815 10641 2.232208 TGTCAGATGCTACCACTGTCTG 59.768 50.000 0.00 0.00 38.07 3.51
7831 10657 8.603203 CCACTGTCTGGTTACACAATTTGTGG 62.603 46.154 28.10 12.95 42.88 4.17
7873 10699 5.666969 TGCACGTAGCCATTATTTCATAC 57.333 39.130 7.38 0.00 44.83 2.39
7874 10700 4.210328 TGCACGTAGCCATTATTTCATACG 59.790 41.667 7.38 0.00 44.83 3.06
7875 10701 4.377022 GCACGTAGCCATTATTTCATACGG 60.377 45.833 7.38 0.00 40.06 4.02
7876 10702 4.986034 CACGTAGCCATTATTTCATACGGA 59.014 41.667 7.38 0.00 40.06 4.69
7877 10703 5.118664 CACGTAGCCATTATTTCATACGGAG 59.881 44.000 7.38 0.00 40.06 4.63
7895 10721 6.786967 ACGGAGTATAAGACCTTGTACAAT 57.213 37.500 9.13 0.00 41.94 2.71
7896 10722 6.570692 ACGGAGTATAAGACCTTGTACAATG 58.429 40.000 9.13 9.11 41.94 2.82
7897 10723 5.462398 CGGAGTATAAGACCTTGTACAATGC 59.538 44.000 9.13 3.33 38.91 3.56
7898 10724 6.583562 GGAGTATAAGACCTTGTACAATGCT 58.416 40.000 9.13 0.98 38.91 3.79
7899 10725 7.469594 CGGAGTATAAGACCTTGTACAATGCTA 60.470 40.741 9.13 0.25 38.91 3.49
7900 10726 7.868415 GGAGTATAAGACCTTGTACAATGCTAG 59.132 40.741 9.13 0.00 38.91 3.42
7901 10727 7.727181 AGTATAAGACCTTGTACAATGCTAGG 58.273 38.462 9.13 8.88 38.91 3.02
7902 10728 4.910458 AAGACCTTGTACAATGCTAGGT 57.090 40.909 14.67 14.67 42.92 3.08
7903 10729 4.910458 AGACCTTGTACAATGCTAGGTT 57.090 40.909 15.64 5.47 40.97 3.50
7904 10730 4.833390 AGACCTTGTACAATGCTAGGTTC 58.167 43.478 15.64 9.97 40.97 3.62
7905 10731 4.532521 AGACCTTGTACAATGCTAGGTTCT 59.467 41.667 15.64 11.61 40.97 3.01
7906 10732 5.013183 AGACCTTGTACAATGCTAGGTTCTT 59.987 40.000 15.64 4.67 40.97 2.52
7907 10733 6.212791 AGACCTTGTACAATGCTAGGTTCTTA 59.787 38.462 15.64 0.00 40.97 2.10
7908 10734 6.407202 ACCTTGTACAATGCTAGGTTCTTAG 58.593 40.000 9.13 0.00 38.56 2.18
7909 10735 6.212791 ACCTTGTACAATGCTAGGTTCTTAGA 59.787 38.462 9.13 0.00 38.56 2.10
7910 10736 7.092846 ACCTTGTACAATGCTAGGTTCTTAGAT 60.093 37.037 9.13 0.00 38.56 1.98
7911 10737 8.421784 CCTTGTACAATGCTAGGTTCTTAGATA 58.578 37.037 9.13 0.00 0.00 1.98
7912 10738 9.817809 CTTGTACAATGCTAGGTTCTTAGATAA 57.182 33.333 9.13 0.00 0.00 1.75
7920 10746 8.882415 TGCTAGGTTCTTAGATAAATAAACCG 57.118 34.615 0.00 0.00 37.64 4.44
7921 10747 7.929785 TGCTAGGTTCTTAGATAAATAAACCGG 59.070 37.037 0.00 0.00 37.64 5.28
7922 10748 7.387122 GCTAGGTTCTTAGATAAATAAACCGGG 59.613 40.741 6.32 0.00 37.64 5.73
7923 10749 7.204243 AGGTTCTTAGATAAATAAACCGGGT 57.796 36.000 6.32 0.00 37.64 5.28
7924 10750 7.636579 AGGTTCTTAGATAAATAAACCGGGTT 58.363 34.615 10.96 10.96 37.64 4.11
7925 10751 8.111545 AGGTTCTTAGATAAATAAACCGGGTTT 58.888 33.333 26.79 26.79 37.64 3.27
7926 10752 8.742777 GGTTCTTAGATAAATAAACCGGGTTTT 58.257 33.333 28.50 14.55 37.01 2.43
7929 10755 9.743581 TCTTAGATAAATAAACCGGGTTTTTCT 57.256 29.630 28.50 21.68 37.01 2.52
7930 10756 9.783256 CTTAGATAAATAAACCGGGTTTTTCTG 57.217 33.333 28.50 9.92 37.01 3.02
7931 10757 9.517868 TTAGATAAATAAACCGGGTTTTTCTGA 57.482 29.630 28.50 12.10 37.01 3.27
7932 10758 8.411991 AGATAAATAAACCGGGTTTTTCTGAA 57.588 30.769 28.50 11.38 37.01 3.02
7933 10759 8.520351 AGATAAATAAACCGGGTTTTTCTGAAG 58.480 33.333 28.50 0.00 37.01 3.02
7934 10760 2.882927 AAACCGGGTTTTTCTGAAGC 57.117 45.000 19.22 0.00 31.10 3.86
7935 10761 1.770294 AACCGGGTTTTTCTGAAGCA 58.230 45.000 6.59 0.00 0.00 3.91
7936 10762 1.029681 ACCGGGTTTTTCTGAAGCAC 58.970 50.000 6.32 0.00 0.00 4.40
7937 10763 1.028905 CCGGGTTTTTCTGAAGCACA 58.971 50.000 0.00 0.00 0.00 4.57
7938 10764 1.001378 CCGGGTTTTTCTGAAGCACAG 60.001 52.381 0.00 4.84 46.97 3.66
7939 10765 1.001378 CGGGTTTTTCTGAAGCACAGG 60.001 52.381 10.23 0.00 45.76 4.00
7940 10766 2.031870 GGGTTTTTCTGAAGCACAGGT 58.968 47.619 10.23 0.00 45.76 4.00
7941 10767 2.223805 GGGTTTTTCTGAAGCACAGGTG 60.224 50.000 10.23 0.00 45.76 4.00
7956 10782 4.832248 CACAGGTGCTTATTTCTACAGGA 58.168 43.478 0.00 0.00 0.00 3.86
7957 10783 4.872691 CACAGGTGCTTATTTCTACAGGAG 59.127 45.833 0.00 0.00 0.00 3.69
7958 10784 4.777896 ACAGGTGCTTATTTCTACAGGAGA 59.222 41.667 0.00 0.00 0.00 3.71
7959 10785 5.105146 ACAGGTGCTTATTTCTACAGGAGAG 60.105 44.000 0.00 0.00 34.93 3.20
7960 10786 5.127845 CAGGTGCTTATTTCTACAGGAGAGA 59.872 44.000 0.00 0.00 34.93 3.10
7961 10787 5.902431 AGGTGCTTATTTCTACAGGAGAGAT 59.098 40.000 0.00 0.00 34.93 2.75
7962 10788 5.988561 GGTGCTTATTTCTACAGGAGAGATG 59.011 44.000 0.00 0.00 34.93 2.90
7963 10789 5.465056 GTGCTTATTTCTACAGGAGAGATGC 59.535 44.000 0.00 0.00 34.93 3.91
7964 10790 4.994217 GCTTATTTCTACAGGAGAGATGCC 59.006 45.833 0.00 0.00 34.93 4.40
7965 10791 5.221621 GCTTATTTCTACAGGAGAGATGCCT 60.222 44.000 0.00 0.00 34.93 4.75
7966 10792 6.015010 GCTTATTTCTACAGGAGAGATGCCTA 60.015 42.308 0.00 0.00 34.93 3.93
7967 10793 7.472100 GCTTATTTCTACAGGAGAGATGCCTAA 60.472 40.741 0.00 0.00 34.93 2.69
7968 10794 8.497910 TTATTTCTACAGGAGAGATGCCTAAT 57.502 34.615 0.00 0.00 34.93 1.73
7969 10795 6.814954 TTTCTACAGGAGAGATGCCTAATT 57.185 37.500 0.00 0.00 34.93 1.40
7970 10796 5.798125 TCTACAGGAGAGATGCCTAATTG 57.202 43.478 0.00 0.00 33.51 2.32
7971 10797 5.458595 TCTACAGGAGAGATGCCTAATTGA 58.541 41.667 0.00 0.00 33.51 2.57
7972 10798 4.686191 ACAGGAGAGATGCCTAATTGAG 57.314 45.455 0.00 0.00 33.51 3.02
7973 10799 3.181456 ACAGGAGAGATGCCTAATTGAGC 60.181 47.826 0.00 0.00 33.51 4.26
7974 10800 2.036992 AGGAGAGATGCCTAATTGAGCG 59.963 50.000 0.00 0.00 32.92 5.03
7975 10801 2.224161 GGAGAGATGCCTAATTGAGCGT 60.224 50.000 0.00 0.00 0.00 5.07
7976 10802 3.056304 GAGAGATGCCTAATTGAGCGTC 58.944 50.000 13.20 13.20 43.85 5.19
7980 10806 2.596904 TGCCTAATTGAGCGTCTACC 57.403 50.000 0.00 0.00 0.00 3.18
7981 10807 1.138266 TGCCTAATTGAGCGTCTACCC 59.862 52.381 0.00 0.00 0.00 3.69
7982 10808 1.413077 GCCTAATTGAGCGTCTACCCT 59.587 52.381 0.00 0.00 0.00 4.34
7983 10809 2.803492 GCCTAATTGAGCGTCTACCCTG 60.803 54.545 0.00 0.00 0.00 4.45
7984 10810 2.431057 CCTAATTGAGCGTCTACCCTGT 59.569 50.000 0.00 0.00 0.00 4.00
7985 10811 3.635373 CCTAATTGAGCGTCTACCCTGTA 59.365 47.826 0.00 0.00 0.00 2.74
7986 10812 3.521947 AATTGAGCGTCTACCCTGTAC 57.478 47.619 0.00 0.00 0.00 2.90
7987 10813 1.913778 TTGAGCGTCTACCCTGTACA 58.086 50.000 0.00 0.00 0.00 2.90
7988 10814 1.913778 TGAGCGTCTACCCTGTACAA 58.086 50.000 0.00 0.00 0.00 2.41
7989 10815 1.542915 TGAGCGTCTACCCTGTACAAC 59.457 52.381 0.00 0.00 0.00 3.32
7990 10816 1.817447 GAGCGTCTACCCTGTACAACT 59.183 52.381 0.00 0.00 0.00 3.16
7991 10817 2.230750 GAGCGTCTACCCTGTACAACTT 59.769 50.000 0.00 0.00 0.00 2.66
7992 10818 3.424703 AGCGTCTACCCTGTACAACTTA 58.575 45.455 0.00 0.00 0.00 2.24
7993 10819 3.442977 AGCGTCTACCCTGTACAACTTAG 59.557 47.826 0.00 0.00 0.00 2.18
7994 10820 3.441572 GCGTCTACCCTGTACAACTTAGA 59.558 47.826 0.00 0.17 0.00 2.10
7995 10821 4.097589 GCGTCTACCCTGTACAACTTAGAT 59.902 45.833 0.00 0.00 0.00 1.98
7996 10822 5.297776 GCGTCTACCCTGTACAACTTAGATA 59.702 44.000 0.00 0.00 0.00 1.98
7997 10823 6.513066 GCGTCTACCCTGTACAACTTAGATAG 60.513 46.154 0.00 3.55 0.00 2.08
7998 10824 6.765036 CGTCTACCCTGTACAACTTAGATAGA 59.235 42.308 0.00 0.00 0.00 1.98
7999 10825 7.254727 CGTCTACCCTGTACAACTTAGATAGAC 60.255 44.444 0.00 6.94 34.22 2.59
8000 10826 7.555554 GTCTACCCTGTACAACTTAGATAGACA 59.444 40.741 15.28 0.00 36.44 3.41
8001 10827 8.280084 TCTACCCTGTACAACTTAGATAGACAT 58.720 37.037 0.00 0.00 0.00 3.06
8002 10828 7.113658 ACCCTGTACAACTTAGATAGACATG 57.886 40.000 0.00 0.00 0.00 3.21
8003 10829 5.986135 CCCTGTACAACTTAGATAGACATGC 59.014 44.000 0.00 0.00 0.00 4.06
8004 10830 6.183360 CCCTGTACAACTTAGATAGACATGCT 60.183 42.308 0.00 0.00 0.00 3.79
8005 10831 7.268586 CCTGTACAACTTAGATAGACATGCTT 58.731 38.462 0.00 0.00 0.00 3.91
8006 10832 7.766278 CCTGTACAACTTAGATAGACATGCTTT 59.234 37.037 0.00 0.00 0.00 3.51
8007 10833 9.155975 CTGTACAACTTAGATAGACATGCTTTT 57.844 33.333 0.00 0.00 0.00 2.27
8008 10834 8.935844 TGTACAACTTAGATAGACATGCTTTTG 58.064 33.333 0.00 0.00 0.00 2.44
8009 10835 7.986085 ACAACTTAGATAGACATGCTTTTGT 57.014 32.000 0.00 0.00 0.00 2.83
8010 10836 8.396272 ACAACTTAGATAGACATGCTTTTGTT 57.604 30.769 0.00 0.00 0.00 2.83
8011 10837 8.850156 ACAACTTAGATAGACATGCTTTTGTTT 58.150 29.630 0.00 0.00 0.00 2.83
8012 10838 9.334693 CAACTTAGATAGACATGCTTTTGTTTC 57.665 33.333 0.00 0.00 0.00 2.78
8013 10839 8.621532 ACTTAGATAGACATGCTTTTGTTTCA 57.378 30.769 0.00 0.00 0.00 2.69
8014 10840 9.066892 ACTTAGATAGACATGCTTTTGTTTCAA 57.933 29.630 0.00 0.00 0.00 2.69
8015 10841 9.897744 CTTAGATAGACATGCTTTTGTTTCAAA 57.102 29.630 0.00 0.00 0.00 2.69
8018 10844 9.415544 AGATAGACATGCTTTTGTTTCAAATTC 57.584 29.630 0.00 0.00 0.00 2.17
8019 10845 9.415544 GATAGACATGCTTTTGTTTCAAATTCT 57.584 29.630 0.00 0.00 0.00 2.40
8021 10847 8.579682 AGACATGCTTTTGTTTCAAATTCTAC 57.420 30.769 0.00 0.00 0.00 2.59
8022 10848 8.416329 AGACATGCTTTTGTTTCAAATTCTACT 58.584 29.630 0.00 0.00 0.00 2.57
8023 10849 8.356533 ACATGCTTTTGTTTCAAATTCTACTG 57.643 30.769 0.00 0.00 0.00 2.74
8024 10850 7.981225 ACATGCTTTTGTTTCAAATTCTACTGT 59.019 29.630 0.00 0.00 0.00 3.55
8025 10851 8.819974 CATGCTTTTGTTTCAAATTCTACTGTT 58.180 29.630 0.00 0.00 0.00 3.16
8026 10852 8.770438 TGCTTTTGTTTCAAATTCTACTGTTT 57.230 26.923 0.00 0.00 0.00 2.83
8027 10853 9.213799 TGCTTTTGTTTCAAATTCTACTGTTTT 57.786 25.926 0.00 0.00 0.00 2.43
8046 10872 4.965283 TTTTTAGGATGATGTTCCCCCT 57.035 40.909 0.00 0.00 36.35 4.79
8048 10874 5.646692 TTTTAGGATGATGTTCCCCCTAG 57.353 43.478 0.00 0.00 36.35 3.02
8049 10875 1.439543 AGGATGATGTTCCCCCTAGC 58.560 55.000 0.00 0.00 36.35 3.42
8050 10876 1.061033 AGGATGATGTTCCCCCTAGCT 60.061 52.381 0.00 0.00 36.35 3.32
8051 10877 1.777272 GGATGATGTTCCCCCTAGCTT 59.223 52.381 0.00 0.00 0.00 3.74
8052 10878 2.175715 GGATGATGTTCCCCCTAGCTTT 59.824 50.000 0.00 0.00 0.00 3.51
8053 10879 3.394606 GGATGATGTTCCCCCTAGCTTTA 59.605 47.826 0.00 0.00 0.00 1.85
8054 10880 4.043435 GGATGATGTTCCCCCTAGCTTTAT 59.957 45.833 0.00 0.00 0.00 1.40
8055 10881 5.458215 GGATGATGTTCCCCCTAGCTTTATT 60.458 44.000 0.00 0.00 0.00 1.40
8056 10882 4.792068 TGATGTTCCCCCTAGCTTTATTG 58.208 43.478 0.00 0.00 0.00 1.90
8057 10883 4.229582 TGATGTTCCCCCTAGCTTTATTGT 59.770 41.667 0.00 0.00 0.00 2.71
8058 10884 4.668138 TGTTCCCCCTAGCTTTATTGTT 57.332 40.909 0.00 0.00 0.00 2.83
8059 10885 5.005628 TGTTCCCCCTAGCTTTATTGTTT 57.994 39.130 0.00 0.00 0.00 2.83
8060 10886 5.014202 TGTTCCCCCTAGCTTTATTGTTTC 58.986 41.667 0.00 0.00 0.00 2.78
8061 10887 4.938575 TCCCCCTAGCTTTATTGTTTCA 57.061 40.909 0.00 0.00 0.00 2.69
8062 10888 4.855340 TCCCCCTAGCTTTATTGTTTCAG 58.145 43.478 0.00 0.00 0.00 3.02
8063 10889 4.538490 TCCCCCTAGCTTTATTGTTTCAGA 59.462 41.667 0.00 0.00 0.00 3.27
8064 10890 5.193728 TCCCCCTAGCTTTATTGTTTCAGAT 59.806 40.000 0.00 0.00 0.00 2.90
8065 10891 5.300286 CCCCCTAGCTTTATTGTTTCAGATG 59.700 44.000 0.00 0.00 0.00 2.90
8066 10892 5.888161 CCCCTAGCTTTATTGTTTCAGATGT 59.112 40.000 0.00 0.00 0.00 3.06
8067 10893 7.054124 CCCCTAGCTTTATTGTTTCAGATGTA 58.946 38.462 0.00 0.00 0.00 2.29
8068 10894 7.556275 CCCCTAGCTTTATTGTTTCAGATGTAA 59.444 37.037 0.00 0.00 0.00 2.41
8069 10895 9.125026 CCCTAGCTTTATTGTTTCAGATGTAAT 57.875 33.333 0.00 0.00 0.00 1.89
8070 10896 9.941664 CCTAGCTTTATTGTTTCAGATGTAATG 57.058 33.333 0.00 0.00 0.00 1.90
8073 10899 9.846248 AGCTTTATTGTTTCAGATGTAATGAAC 57.154 29.630 0.00 0.00 36.44 3.18
8074 10900 8.788813 GCTTTATTGTTTCAGATGTAATGAACG 58.211 33.333 0.00 0.00 36.44 3.95
8077 10903 9.986833 TTATTGTTTCAGATGTAATGAACGATG 57.013 29.630 0.00 0.00 36.44 3.84
8078 10904 5.868257 TGTTTCAGATGTAATGAACGATGC 58.132 37.500 0.00 0.00 36.44 3.91
8079 10905 5.411053 TGTTTCAGATGTAATGAACGATGCA 59.589 36.000 0.00 0.00 36.44 3.96
8080 10906 6.093909 TGTTTCAGATGTAATGAACGATGCAT 59.906 34.615 0.00 0.00 36.44 3.96
8081 10907 5.912360 TCAGATGTAATGAACGATGCATC 57.088 39.130 17.10 17.10 34.61 3.91
8096 10922 1.912001 GCATCGCTGCTTATTTTGCA 58.088 45.000 3.51 0.00 45.32 4.08
8097 10923 2.261345 GCATCGCTGCTTATTTTGCAA 58.739 42.857 3.51 0.00 45.32 4.08
8098 10924 2.861935 GCATCGCTGCTTATTTTGCAAT 59.138 40.909 3.51 0.00 45.32 3.56
8099 10925 4.043750 GCATCGCTGCTTATTTTGCAATA 58.956 39.130 3.51 0.00 45.32 1.90
8100 10926 4.503734 GCATCGCTGCTTATTTTGCAATAA 59.496 37.500 3.51 0.00 45.32 1.40
8101 10927 5.005586 GCATCGCTGCTTATTTTGCAATAAA 59.994 36.000 3.51 0.00 45.32 1.40
8102 10928 6.633683 CATCGCTGCTTATTTTGCAATAAAG 58.366 36.000 0.00 5.80 40.13 1.85
8103 10929 5.708948 TCGCTGCTTATTTTGCAATAAAGT 58.291 33.333 0.00 0.00 40.13 2.66
8104 10930 5.572511 TCGCTGCTTATTTTGCAATAAAGTG 59.427 36.000 0.00 0.00 40.13 3.16
8105 10931 5.345741 CGCTGCTTATTTTGCAATAAAGTGT 59.654 36.000 0.00 0.00 40.13 3.55
8106 10932 6.527957 GCTGCTTATTTTGCAATAAAGTGTG 58.472 36.000 0.00 1.50 40.13 3.82
8107 10933 6.464895 TGCTTATTTTGCAATAAAGTGTGC 57.535 33.333 0.00 0.00 41.29 4.57
8108 10934 5.407995 TGCTTATTTTGCAATAAAGTGTGCC 59.592 36.000 0.00 0.00 40.14 5.01
8109 10935 5.407995 GCTTATTTTGCAATAAAGTGTGCCA 59.592 36.000 0.00 0.00 40.14 4.92
8110 10936 6.092533 GCTTATTTTGCAATAAAGTGTGCCAT 59.907 34.615 0.00 0.00 40.14 4.40
8111 10937 5.866335 ATTTTGCAATAAAGTGTGCCATG 57.134 34.783 0.00 0.00 40.14 3.66
8112 10938 4.597404 TTTGCAATAAAGTGTGCCATGA 57.403 36.364 0.00 0.00 40.14 3.07
8113 10939 4.597404 TTGCAATAAAGTGTGCCATGAA 57.403 36.364 0.00 0.00 40.14 2.57
8114 10940 4.804868 TGCAATAAAGTGTGCCATGAAT 57.195 36.364 0.00 0.00 40.14 2.57
8115 10941 4.496360 TGCAATAAAGTGTGCCATGAATG 58.504 39.130 0.00 0.00 40.14 2.67
8116 10942 3.307782 GCAATAAAGTGTGCCATGAATGC 59.692 43.478 0.00 0.00 34.58 3.56
8117 10943 4.751060 CAATAAAGTGTGCCATGAATGCT 58.249 39.130 0.00 0.00 0.00 3.79
8118 10944 5.172934 CAATAAAGTGTGCCATGAATGCTT 58.827 37.500 0.00 0.00 0.00 3.91
8119 10945 3.756933 AAAGTGTGCCATGAATGCTTT 57.243 38.095 0.00 0.00 0.00 3.51
8120 10946 3.308438 AAGTGTGCCATGAATGCTTTC 57.692 42.857 5.41 5.41 0.00 2.62
8121 10947 1.547372 AGTGTGCCATGAATGCTTTCC 59.453 47.619 9.63 0.00 0.00 3.13
8122 10948 0.896923 TGTGCCATGAATGCTTTCCC 59.103 50.000 9.63 0.00 0.00 3.97
8123 10949 1.188863 GTGCCATGAATGCTTTCCCT 58.811 50.000 9.63 0.00 0.00 4.20
8124 10950 1.135721 GTGCCATGAATGCTTTCCCTC 59.864 52.381 9.63 0.00 0.00 4.30
8125 10951 0.383231 GCCATGAATGCTTTCCCTCG 59.617 55.000 9.63 0.00 0.00 4.63
8126 10952 2.018644 GCCATGAATGCTTTCCCTCGA 61.019 52.381 9.63 0.00 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 1.197721 GCACTGTTTCCTTGGTCATCG 59.802 52.381 0.00 0.00 0.00 3.84
66 67 4.299796 ATGGGCGGGGCACTGTTT 62.300 61.111 0.00 0.00 30.56 2.83
88 89 1.373435 CCACACTCCGGCTAACCAA 59.627 57.895 0.00 0.00 34.57 3.67
213 214 0.034059 AAGTGGCCAAGACGAGTCTG 59.966 55.000 7.24 1.77 40.36 3.51
214 215 0.318762 GAAGTGGCCAAGACGAGTCT 59.681 55.000 7.24 0.00 42.75 3.24
221 222 1.118965 TCGTCAGGAAGTGGCCAAGA 61.119 55.000 7.24 0.00 0.00 3.02
241 242 0.098025 ACTGTGCGTTGTTTTGTCGG 59.902 50.000 0.00 0.00 0.00 4.79
251 252 2.291043 CCTAGGGGGACTGTGCGTT 61.291 63.158 0.00 0.00 37.23 4.84
336 337 1.513586 CGGGTCGTCAGCGTCTAAC 60.514 63.158 0.00 0.00 39.49 2.34
338 339 3.129502 CCGGGTCGTCAGCGTCTA 61.130 66.667 0.00 0.00 39.49 2.59
397 399 2.716969 GCTCCTGGGGGTTTTATAGGAT 59.283 50.000 0.00 0.00 36.97 3.24
432 435 6.895756 TCTCTATCCTTTCCTACTTACTTGCA 59.104 38.462 0.00 0.00 0.00 4.08
443 450 5.129650 GTGGCTAACTTCTCTATCCTTTCCT 59.870 44.000 0.00 0.00 0.00 3.36
444 451 5.361427 GTGGCTAACTTCTCTATCCTTTCC 58.639 45.833 0.00 0.00 0.00 3.13
445 452 5.361427 GGTGGCTAACTTCTCTATCCTTTC 58.639 45.833 0.00 0.00 0.00 2.62
446 453 4.164413 GGGTGGCTAACTTCTCTATCCTTT 59.836 45.833 0.00 0.00 0.00 3.11
486 501 1.656587 TAGGCTGCTCCTTCTTTCCA 58.343 50.000 0.00 0.00 44.75 3.53
488 503 2.013400 GCTTAGGCTGCTCCTTCTTTC 58.987 52.381 0.00 0.00 44.75 2.62
489 504 1.340502 GGCTTAGGCTGCTCCTTCTTT 60.341 52.381 0.00 0.00 44.75 2.52
490 505 0.254462 GGCTTAGGCTGCTCCTTCTT 59.746 55.000 0.00 0.00 44.75 2.52
532 547 2.906389 AGTTGCTCCTGGAGTTGTATGA 59.094 45.455 23.92 1.40 31.39 2.15
556 571 7.924412 CCGAGTGTGGTTTATATGTAACAGTAT 59.076 37.037 5.31 0.00 0.00 2.12
674 689 1.229082 AGGTTCGAGGGCACTGGTA 60.229 57.895 0.00 0.00 0.00 3.25
689 704 4.618378 ATGACTAAAGAGAGGAGGAGGT 57.382 45.455 0.00 0.00 0.00 3.85
711 727 1.450134 GCACGGCAGATGACATGGA 60.450 57.895 0.00 0.00 0.00 3.41
749 765 5.532664 AGATACTCCCTCCGTTTCATAAC 57.467 43.478 0.00 0.00 0.00 1.89
782 798 7.430441 ACATTTTACAGGTAAAAGCGTGAAAT 58.570 30.769 18.76 1.84 44.95 2.17
786 802 5.627780 GGAACATTTTACAGGTAAAAGCGTG 59.372 40.000 18.76 15.16 44.95 5.34
807 823 9.753674 ACCTGTGAGATTTTATTCATTTAGGAA 57.246 29.630 0.00 0.00 31.70 3.36
814 830 7.921786 TTCGAACCTGTGAGATTTTATTCAT 57.078 32.000 0.00 0.00 0.00 2.57
831 847 2.077627 GGCCTCTCTCTTTTTCGAACC 58.922 52.381 0.00 0.00 0.00 3.62
832 848 2.767505 TGGCCTCTCTCTTTTTCGAAC 58.232 47.619 3.32 0.00 0.00 3.95
833 849 3.485463 TTGGCCTCTCTCTTTTTCGAA 57.515 42.857 3.32 0.00 0.00 3.71
835 851 4.773323 ATTTTGGCCTCTCTCTTTTTCG 57.227 40.909 3.32 0.00 0.00 3.46
838 1724 3.642848 TGCAATTTTGGCCTCTCTCTTTT 59.357 39.130 3.32 0.00 0.00 2.27
840 1726 2.880443 TGCAATTTTGGCCTCTCTCTT 58.120 42.857 3.32 0.00 0.00 2.85
864 1750 0.437295 GTAGGCGTGTTTGCGTGTAG 59.563 55.000 0.00 0.00 34.38 2.74
865 1751 0.945265 GGTAGGCGTGTTTGCGTGTA 60.945 55.000 0.00 0.00 34.38 2.90
866 1752 2.248835 GGTAGGCGTGTTTGCGTGT 61.249 57.895 0.00 0.00 34.38 4.49
903 1789 2.167161 CGAGAGCGAGACTGTGTCT 58.833 57.895 3.34 0.00 46.42 3.41
904 1790 4.755546 CGAGAGCGAGACTGTGTC 57.244 61.111 0.00 0.00 40.82 3.67
964 1871 0.523966 TTTTGGCCGTGGCTATTTCG 59.476 50.000 11.25 0.00 41.60 3.46
984 1891 2.022035 ACTGGGAGTGGGAGATGGAATA 60.022 50.000 0.00 0.00 0.00 1.75
1024 1932 2.745884 CGCCGGCATTTGGTGAGA 60.746 61.111 28.98 0.00 39.39 3.27
1097 2005 1.892209 CCTGGTTGTGGTCTTGGTAC 58.108 55.000 0.00 0.00 0.00 3.34
1139 2047 2.016165 TCGTCGTCGTCGTCTTCGA 61.016 57.895 11.41 6.22 38.59 3.71
1191 2099 1.616628 GGAGGAGGGCTTCAAGGGA 60.617 63.158 0.00 0.00 0.00 4.20
1229 2137 1.477295 GCTGTAGCTTCTTACGGAGGT 59.523 52.381 0.00 0.00 38.21 3.85
1254 2162 1.109609 CCTTACCGGAGTAGGGTGAC 58.890 60.000 9.46 0.00 40.13 3.67
1269 2177 1.914764 AACGGGGCGGTTCTCCTTA 60.915 57.895 0.00 0.00 0.00 2.69
1297 2214 2.223971 CCACTGTAACAACACTCTCGGT 60.224 50.000 0.00 0.00 0.00 4.69
1383 2300 2.027625 CGTCACTTCGTTGCCCTCC 61.028 63.158 0.00 0.00 0.00 4.30
1402 2319 0.323725 ATGCCGCAAATTCCTCCACT 60.324 50.000 0.00 0.00 0.00 4.00
1413 2330 1.069090 GGACCTCGATATGCCGCAA 59.931 57.895 0.00 0.00 0.00 4.85
1508 2425 2.431057 TCTCTCGAATTGGGGAAGCTAC 59.569 50.000 0.00 0.00 0.00 3.58
1510 2427 1.573108 TCTCTCGAATTGGGGAAGCT 58.427 50.000 0.00 0.00 0.00 3.74
1526 2443 4.307432 TGACTCCAAAACACTCGATTCTC 58.693 43.478 0.00 0.00 0.00 2.87
1555 2472 2.831526 GCCAACTCCCCAAATTACATGT 59.168 45.455 2.69 2.69 0.00 3.21
1580 2497 1.048724 TACCCCATCCGCCTCTTCAG 61.049 60.000 0.00 0.00 0.00 3.02
1593 2510 0.045008 TACAAGCCCTGGATACCCCA 59.955 55.000 0.00 0.00 44.25 4.96
1599 2516 0.466189 CCGCATTACAAGCCCTGGAT 60.466 55.000 0.00 0.00 0.00 3.41
1621 2538 1.229336 CCACCACCCTCTCCTCAGT 60.229 63.158 0.00 0.00 0.00 3.41
1640 2557 1.216064 CCATGAACCAGATCTCCCCA 58.784 55.000 0.00 0.00 0.00 4.96
1644 2561 1.487976 TGGAGCCATGAACCAGATCTC 59.512 52.381 0.00 0.00 0.00 2.75
1666 2583 2.109774 CCCTTCATCAGAGACAGAGCT 58.890 52.381 0.00 0.00 0.00 4.09
1676 2593 7.250032 TCTATATCCACATTCCCTTCATCAG 57.750 40.000 0.00 0.00 0.00 2.90
1717 2634 2.380084 TTCTTTTGGGTCTCGGATCG 57.620 50.000 0.00 0.00 0.00 3.69
1737 2654 1.347707 ACTTCAAATCCACTCCGCTCA 59.652 47.619 0.00 0.00 0.00 4.26
1772 2689 5.717178 TCTGATACTATAGAACATGAGGGGC 59.283 44.000 6.78 0.00 0.00 5.80
1775 2692 7.701539 AGCTCTGATACTATAGAACATGAGG 57.298 40.000 6.78 0.00 0.00 3.86
1787 2704 4.583489 CCGGGACTAAAAGCTCTGATACTA 59.417 45.833 0.00 0.00 0.00 1.82
1790 2707 3.638860 TCCGGGACTAAAAGCTCTGATA 58.361 45.455 0.00 0.00 0.00 2.15
1806 2723 5.040635 CCAAAATCGTATTTTGAATCCGGG 58.959 41.667 23.13 9.77 40.73 5.73
1821 2738 2.733227 GCAATCTGCACCTCCAAAATCG 60.733 50.000 0.00 0.00 44.26 3.34
1938 2860 4.219264 AGAGCTTGATTTCTTCTCCCTG 57.781 45.455 0.00 0.00 0.00 4.45
1959 2881 8.926092 ATAGATACTCTACACAATCTGCAGTA 57.074 34.615 14.67 0.48 30.79 2.74
1982 2904 5.163447 ACCGATTCAACTGAATTCGAGGATA 60.163 40.000 17.89 0.00 44.14 2.59
2173 3105 6.016610 TGCACTTTATAAACTGACTCAAACCC 60.017 38.462 8.52 0.00 0.00 4.11
2358 3290 6.767902 TGAGAGCCCAATAAGTTATCATGAAC 59.232 38.462 0.00 0.00 0.00 3.18
2403 3335 7.549147 AGAAACACATCAGTACCTAAGGTTA 57.451 36.000 0.00 0.00 37.09 2.85
2542 3474 3.215151 TCTATCAACTCGACTAGGCAGG 58.785 50.000 0.00 0.00 0.00 4.85
2622 3554 4.095632 ACATGACACGAAAACATGACACAA 59.904 37.500 17.47 0.00 42.41 3.33
2625 3557 4.891627 AACATGACACGAAAACATGACA 57.108 36.364 17.47 1.16 42.41 3.58
2627 3559 6.258947 TGAGTTAACATGACACGAAAACATGA 59.741 34.615 8.61 1.26 42.41 3.07
2629 3561 6.612247 TGAGTTAACATGACACGAAAACAT 57.388 33.333 8.61 0.00 0.00 2.71
2631 3563 5.395486 GCTTGAGTTAACATGACACGAAAAC 59.605 40.000 8.61 0.00 0.00 2.43
2830 3764 8.733458 CACTTGTTCTCAATATTTTCTCCATCA 58.267 33.333 0.00 0.00 32.82 3.07
3015 3949 7.665559 TCCATAGGCACCAATATGTTAATTCTC 59.334 37.037 0.00 0.00 0.00 2.87
3341 4275 9.588096 AGAGGTGTATCTTTAACCTTTGATTTT 57.412 29.630 0.00 0.00 44.42 1.82
3345 4279 7.447238 CCAAAGAGGTGTATCTTTAACCTTTGA 59.553 37.037 0.00 0.00 45.51 2.69
3458 4392 7.432869 TGCAGCAACAAATTTAGTTACAGAAT 58.567 30.769 0.00 0.00 0.00 2.40
3838 4773 1.808411 TTGCTAAAGAACAGCCTCGG 58.192 50.000 0.00 0.00 38.29 4.63
4042 4979 3.257873 CCATGAACATTACAGCCCAAACA 59.742 43.478 0.00 0.00 0.00 2.83
4048 4985 2.648059 AGCTCCATGAACATTACAGCC 58.352 47.619 0.00 0.00 0.00 4.85
4075 5012 7.277174 AGTTCAAAAGTTACTTTGCTGCTAT 57.723 32.000 11.35 0.00 36.44 2.97
4135 5072 8.347035 AGCACACGTGTTGTTTATAGTATTTTT 58.653 29.630 20.79 0.00 35.67 1.94
4139 5076 7.201496 GCTAAGCACACGTGTTGTTTATAGTAT 60.201 37.037 20.79 1.38 35.67 2.12
4140 5077 6.089820 GCTAAGCACACGTGTTGTTTATAGTA 59.910 38.462 20.79 3.29 35.67 1.82
4142 5079 5.120208 AGCTAAGCACACGTGTTGTTTATAG 59.880 40.000 20.79 15.42 35.67 1.31
4143 5080 4.992319 AGCTAAGCACACGTGTTGTTTATA 59.008 37.500 20.79 5.91 35.67 0.98
4144 5081 3.813166 AGCTAAGCACACGTGTTGTTTAT 59.187 39.130 20.79 6.72 35.67 1.40
4145 5082 3.199677 AGCTAAGCACACGTGTTGTTTA 58.800 40.909 20.79 19.30 35.67 2.01
4445 5387 7.039504 AGGCATCAAAACATCAAATAGAAGTGT 60.040 33.333 0.00 0.00 0.00 3.55
4997 5940 8.815189 GTCGTAGAAACTCAACTCTAACTTTTT 58.185 33.333 0.00 0.00 39.69 1.94
4998 5941 7.437565 GGTCGTAGAAACTCAACTCTAACTTTT 59.562 37.037 0.00 0.00 39.69 2.27
4999 5942 6.922407 GGTCGTAGAAACTCAACTCTAACTTT 59.078 38.462 0.00 0.00 39.69 2.66
5000 5943 6.040166 TGGTCGTAGAAACTCAACTCTAACTT 59.960 38.462 0.00 0.00 39.69 2.66
5001 5944 5.533903 TGGTCGTAGAAACTCAACTCTAACT 59.466 40.000 0.00 0.00 39.69 2.24
5002 5945 5.766222 TGGTCGTAGAAACTCAACTCTAAC 58.234 41.667 0.00 0.00 39.69 2.34
5003 5946 6.395426 TTGGTCGTAGAAACTCAACTCTAA 57.605 37.500 0.00 0.00 39.69 2.10
5004 5947 6.433404 AGATTGGTCGTAGAAACTCAACTCTA 59.567 38.462 0.00 0.00 39.69 2.43
5005 5948 4.931661 TTGGTCGTAGAAACTCAACTCT 57.068 40.909 0.00 0.00 39.69 3.24
5006 5949 5.346281 CAGATTGGTCGTAGAAACTCAACTC 59.654 44.000 0.00 0.00 39.69 3.01
5007 5950 5.230942 CAGATTGGTCGTAGAAACTCAACT 58.769 41.667 0.00 0.00 39.69 3.16
5008 5951 4.143094 GCAGATTGGTCGTAGAAACTCAAC 60.143 45.833 0.00 0.00 39.69 3.18
5009 5952 3.994392 GCAGATTGGTCGTAGAAACTCAA 59.006 43.478 0.00 0.00 39.69 3.02
5010 5953 3.585862 GCAGATTGGTCGTAGAAACTCA 58.414 45.455 0.00 0.00 39.69 3.41
5011 5954 2.930682 GGCAGATTGGTCGTAGAAACTC 59.069 50.000 0.00 0.00 39.69 3.01
5012 5955 2.301870 TGGCAGATTGGTCGTAGAAACT 59.698 45.455 0.00 0.00 39.69 2.66
5013 5956 2.695359 TGGCAGATTGGTCGTAGAAAC 58.305 47.619 0.00 0.00 39.69 2.78
5014 5957 3.627395 ATGGCAGATTGGTCGTAGAAA 57.373 42.857 0.00 0.00 39.69 2.52
5015 5958 3.627395 AATGGCAGATTGGTCGTAGAA 57.373 42.857 0.00 0.00 39.69 2.10
5016 5959 4.746535 TTAATGGCAGATTGGTCGTAGA 57.253 40.909 0.00 0.00 0.00 2.59
5100 6044 4.142093 GCTTGTATGGCCTCAATGACAAAT 60.142 41.667 3.32 0.00 0.00 2.32
5745 6772 9.717942 AGTAGCCATCAGAAAATCATAATAGAC 57.282 33.333 0.00 0.00 0.00 2.59
5918 6945 3.709653 AGCGAGTAATATTGAACAGGGGA 59.290 43.478 0.00 0.00 0.00 4.81
5935 6962 3.000727 AGTTATTTTGGGACGAAGCGAG 58.999 45.455 0.00 0.00 0.00 5.03
5936 6963 2.739913 CAGTTATTTTGGGACGAAGCGA 59.260 45.455 0.00 0.00 0.00 4.93
5937 6964 2.482721 ACAGTTATTTTGGGACGAAGCG 59.517 45.455 0.00 0.00 0.00 4.68
5938 6965 3.751698 AGACAGTTATTTTGGGACGAAGC 59.248 43.478 0.00 0.00 0.00 3.86
5939 6966 5.941948 AAGACAGTTATTTTGGGACGAAG 57.058 39.130 0.00 0.00 0.00 3.79
5940 6967 6.072893 GCTTAAGACAGTTATTTTGGGACGAA 60.073 38.462 6.67 0.00 0.00 3.85
5941 6968 5.410439 GCTTAAGACAGTTATTTTGGGACGA 59.590 40.000 6.67 0.00 0.00 4.20
5942 6969 5.411669 AGCTTAAGACAGTTATTTTGGGACG 59.588 40.000 6.67 0.00 0.00 4.79
5943 6970 6.819397 AGCTTAAGACAGTTATTTTGGGAC 57.181 37.500 6.67 0.00 0.00 4.46
5944 6971 8.161425 ACTAAGCTTAAGACAGTTATTTTGGGA 58.839 33.333 6.67 0.00 0.00 4.37
5945 6972 8.336801 ACTAAGCTTAAGACAGTTATTTTGGG 57.663 34.615 6.67 0.00 0.00 4.12
5953 6980 8.827677 CAAAGTTGTACTAAGCTTAAGACAGTT 58.172 33.333 15.83 12.28 0.00 3.16
5954 6981 7.985752 ACAAAGTTGTACTAAGCTTAAGACAGT 59.014 33.333 15.83 10.85 40.16 3.55
5955 6982 8.366671 ACAAAGTTGTACTAAGCTTAAGACAG 57.633 34.615 15.83 6.05 40.16 3.51
5980 7007 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
5982 7009 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
5983 7010 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
5984 7011 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
5985 7012 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
5986 7013 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
5987 7014 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
5990 7017 9.391006 TCAAAATAAGTGTCTCAACTTTGTACT 57.609 29.630 0.00 0.00 40.77 2.73
5991 7018 9.651718 CTCAAAATAAGTGTCTCAACTTTGTAC 57.348 33.333 0.00 0.00 40.77 2.90
5992 7019 9.607988 TCTCAAAATAAGTGTCTCAACTTTGTA 57.392 29.630 0.00 0.00 40.77 2.41
5993 7020 8.506168 TCTCAAAATAAGTGTCTCAACTTTGT 57.494 30.769 0.00 0.00 40.77 2.83
5994 7021 9.390795 CATCTCAAAATAAGTGTCTCAACTTTG 57.609 33.333 0.00 0.00 40.77 2.77
5995 7022 8.571336 CCATCTCAAAATAAGTGTCTCAACTTT 58.429 33.333 0.00 0.00 40.77 2.66
5996 7023 7.939039 TCCATCTCAAAATAAGTGTCTCAACTT 59.061 33.333 0.00 0.00 42.89 2.66
5997 7024 7.453393 TCCATCTCAAAATAAGTGTCTCAACT 58.547 34.615 0.00 0.00 0.00 3.16
5998 7025 7.148340 CCTCCATCTCAAAATAAGTGTCTCAAC 60.148 40.741 0.00 0.00 0.00 3.18
5999 7026 6.881065 CCTCCATCTCAAAATAAGTGTCTCAA 59.119 38.462 0.00 0.00 0.00 3.02
6000 7027 6.409704 CCTCCATCTCAAAATAAGTGTCTCA 58.590 40.000 0.00 0.00 0.00 3.27
6001 7028 5.819901 CCCTCCATCTCAAAATAAGTGTCTC 59.180 44.000 0.00 0.00 0.00 3.36
6002 7029 5.488919 TCCCTCCATCTCAAAATAAGTGTCT 59.511 40.000 0.00 0.00 0.00 3.41
6003 7030 5.745227 TCCCTCCATCTCAAAATAAGTGTC 58.255 41.667 0.00 0.00 0.00 3.67
6004 7031 5.251700 ACTCCCTCCATCTCAAAATAAGTGT 59.748 40.000 0.00 0.00 0.00 3.55
6005 7032 5.749462 ACTCCCTCCATCTCAAAATAAGTG 58.251 41.667 0.00 0.00 0.00 3.16
6006 7033 7.698163 ATACTCCCTCCATCTCAAAATAAGT 57.302 36.000 0.00 0.00 0.00 2.24
6007 7034 8.986929 AAATACTCCCTCCATCTCAAAATAAG 57.013 34.615 0.00 0.00 0.00 1.73
6008 7035 8.556589 TGAAATACTCCCTCCATCTCAAAATAA 58.443 33.333 0.00 0.00 0.00 1.40
6009 7036 8.101309 TGAAATACTCCCTCCATCTCAAAATA 57.899 34.615 0.00 0.00 0.00 1.40
6010 7037 6.973642 TGAAATACTCCCTCCATCTCAAAAT 58.026 36.000 0.00 0.00 0.00 1.82
6011 7038 6.387192 TGAAATACTCCCTCCATCTCAAAA 57.613 37.500 0.00 0.00 0.00 2.44
6012 7039 6.069440 ACATGAAATACTCCCTCCATCTCAAA 60.069 38.462 0.00 0.00 0.00 2.69
6013 7040 5.429762 ACATGAAATACTCCCTCCATCTCAA 59.570 40.000 0.00 0.00 0.00 3.02
6014 7041 4.971282 ACATGAAATACTCCCTCCATCTCA 59.029 41.667 0.00 0.00 0.00 3.27
6015 7042 5.559148 ACATGAAATACTCCCTCCATCTC 57.441 43.478 0.00 0.00 0.00 2.75
6016 7043 5.983333 AACATGAAATACTCCCTCCATCT 57.017 39.130 0.00 0.00 0.00 2.90
6017 7044 6.183360 CCAAAACATGAAATACTCCCTCCATC 60.183 42.308 0.00 0.00 0.00 3.51
6018 7045 5.658190 CCAAAACATGAAATACTCCCTCCAT 59.342 40.000 0.00 0.00 0.00 3.41
6019 7046 5.016173 CCAAAACATGAAATACTCCCTCCA 58.984 41.667 0.00 0.00 0.00 3.86
6020 7047 4.402474 CCCAAAACATGAAATACTCCCTCC 59.598 45.833 0.00 0.00 0.00 4.30
6021 7048 4.142160 GCCCAAAACATGAAATACTCCCTC 60.142 45.833 0.00 0.00 0.00 4.30
6022 7049 3.769300 GCCCAAAACATGAAATACTCCCT 59.231 43.478 0.00 0.00 0.00 4.20
6023 7050 3.513515 TGCCCAAAACATGAAATACTCCC 59.486 43.478 0.00 0.00 0.00 4.30
6024 7051 4.799564 TGCCCAAAACATGAAATACTCC 57.200 40.909 0.00 0.00 0.00 3.85
6025 7052 5.036737 CGATGCCCAAAACATGAAATACTC 58.963 41.667 0.00 0.00 0.00 2.59
6026 7053 4.142182 CCGATGCCCAAAACATGAAATACT 60.142 41.667 0.00 0.00 0.00 2.12
6027 7054 4.111916 CCGATGCCCAAAACATGAAATAC 58.888 43.478 0.00 0.00 0.00 1.89
6267 8919 5.119743 GGTGAAAACTACAGTACGACAATCC 59.880 44.000 0.00 0.00 0.00 3.01
6274 8926 8.530269 AGAAATAAGGTGAAAACTACAGTACG 57.470 34.615 0.00 0.00 0.00 3.67
6400 9052 5.466819 TCTCTAATGTGTAGACAACGTTGG 58.533 41.667 30.34 13.78 35.11 3.77
6414 9066 9.892130 AAGAAATATCTCCGTTTTCTCTAATGT 57.108 29.630 0.00 0.00 38.42 2.71
6470 9124 1.558233 TCACGGTTTTGGGGTTTTGT 58.442 45.000 0.00 0.00 0.00 2.83
6483 9137 2.832129 ACAGTAATCAGGTCATCACGGT 59.168 45.455 0.00 0.00 0.00 4.83
6486 9140 5.352569 CCAGAAACAGTAATCAGGTCATCAC 59.647 44.000 0.00 0.00 0.00 3.06
6529 9183 0.695347 AGAGGGGAAGAAACAGCAGG 59.305 55.000 0.00 0.00 0.00 4.85
6760 9414 5.479375 ACTCTGCATCTTTGGACATTCATTT 59.521 36.000 0.00 0.00 0.00 2.32
6778 9432 0.957888 GGGCTTCACCTTCACTCTGC 60.958 60.000 0.00 0.00 39.10 4.26
6796 9450 0.601558 ATCAGCACAGCAAGCAAAGG 59.398 50.000 0.00 0.00 0.00 3.11
6802 9456 0.391661 ACGGGTATCAGCACAGCAAG 60.392 55.000 0.00 0.00 0.00 4.01
6816 9470 1.208535 TCGCCATCAGAAATTACGGGT 59.791 47.619 0.00 0.00 0.00 5.28
6823 9477 2.702478 TCAGGATCTCGCCATCAGAAAT 59.298 45.455 0.00 0.00 0.00 2.17
6830 9484 2.419198 GCGTCAGGATCTCGCCAT 59.581 61.111 11.61 0.00 43.41 4.40
6905 9559 4.755123 ACAAGTATGTGTTGTAGCACTTCC 59.245 41.667 0.75 0.00 38.69 3.46
7021 9678 4.588951 AGAATATTCACTCACATAGCCCGA 59.411 41.667 17.56 0.00 0.00 5.14
7044 9701 7.042725 GCAAATGATGTATGAGCGAGTACTTAA 60.043 37.037 0.00 0.00 0.00 1.85
7124 9895 8.768955 GGAACATTGCATACTTAAGAGATACTG 58.231 37.037 10.09 1.34 0.00 2.74
7125 9896 8.709308 AGGAACATTGCATACTTAAGAGATACT 58.291 33.333 10.09 0.00 0.00 2.12
7126 9897 8.894768 AGGAACATTGCATACTTAAGAGATAC 57.105 34.615 10.09 0.00 0.00 2.24
7127 9898 9.905713 AAAGGAACATTGCATACTTAAGAGATA 57.094 29.630 10.09 0.00 0.00 1.98
7128 9899 8.814038 AAAGGAACATTGCATACTTAAGAGAT 57.186 30.769 10.09 0.00 0.00 2.75
7222 10011 6.183361 GCCTAGCCCATTATGAAAGGAAAAAT 60.183 38.462 0.00 0.00 0.00 1.82
7259 10048 1.818674 CCCAGTTTTGTCTGTATGGGC 59.181 52.381 0.00 0.00 40.88 5.36
7265 10054 1.528309 CCGGCCCAGTTTTGTCTGT 60.528 57.895 0.00 0.00 34.02 3.41
7324 10116 3.647636 TGGTTCTAGAGGAGGATTCTGG 58.352 50.000 0.00 0.00 0.00 3.86
7326 10118 4.488770 GGATGGTTCTAGAGGAGGATTCT 58.511 47.826 0.00 0.00 0.00 2.40
7334 10126 0.390860 CTGCCGGATGGTTCTAGAGG 59.609 60.000 5.05 0.00 37.67 3.69
7362 10170 2.749621 GTTACTCTCGGGTTTAGGACGA 59.250 50.000 0.00 0.00 35.14 4.20
7447 10258 0.984995 TGAGAGGGAGAGAGTGACGA 59.015 55.000 0.00 0.00 0.00 4.20
7449 10260 2.365582 GAGTGAGAGGGAGAGAGTGAC 58.634 57.143 0.00 0.00 0.00 3.67
7478 10303 1.435105 CGGCGAGATTCAGCTGAGA 59.565 57.895 17.43 8.70 42.01 3.27
7545 10370 2.919859 CAGAATCACACAGTGAGCTACG 59.080 50.000 7.81 0.00 46.04 3.51
7550 10375 2.222678 GCACACAGAATCACACAGTGAG 59.777 50.000 7.81 0.00 46.04 3.51
7555 10380 2.330440 ACAGCACACAGAATCACACA 57.670 45.000 0.00 0.00 0.00 3.72
7557 10382 1.948834 CCAACAGCACACAGAATCACA 59.051 47.619 0.00 0.00 0.00 3.58
7564 10389 2.480610 AACCGCCAACAGCACACAG 61.481 57.895 0.00 0.00 44.04 3.66
7573 10398 3.047877 CCGAGACCAACCGCCAAC 61.048 66.667 0.00 0.00 0.00 3.77
7578 10403 3.691342 TCCTGCCGAGACCAACCG 61.691 66.667 0.00 0.00 0.00 4.44
7579 10404 2.047179 GTCCTGCCGAGACCAACC 60.047 66.667 0.00 0.00 0.00 3.77
7596 10421 2.642996 TAGATGCACCGACGCCATGG 62.643 60.000 7.63 7.63 0.00 3.66
7807 10633 5.273170 CACAAATTGTGTAACCAGACAGTG 58.727 41.667 17.29 0.00 43.08 3.66
7815 10641 4.760204 AGAGCTACCACAAATTGTGTAACC 59.240 41.667 22.66 9.86 46.45 2.85
7816 10642 5.941948 AGAGCTACCACAAATTGTGTAAC 57.058 39.130 22.66 11.49 46.45 2.50
7831 10657 0.755686 AGGTGCAGCCATAGAGCTAC 59.244 55.000 13.29 0.00 42.61 3.58
7873 10699 5.462398 GCATTGTACAAGGTCTTATACTCCG 59.538 44.000 20.31 0.00 0.00 4.63
7874 10700 6.583562 AGCATTGTACAAGGTCTTATACTCC 58.416 40.000 20.31 1.25 0.00 3.85
7875 10701 7.868415 CCTAGCATTGTACAAGGTCTTATACTC 59.132 40.741 20.31 1.92 0.00 2.59
7876 10702 7.344871 ACCTAGCATTGTACAAGGTCTTATACT 59.655 37.037 20.31 10.07 35.67 2.12
7877 10703 7.498443 ACCTAGCATTGTACAAGGTCTTATAC 58.502 38.462 20.31 3.28 35.67 1.47
7878 10704 7.670605 ACCTAGCATTGTACAAGGTCTTATA 57.329 36.000 20.31 6.61 35.67 0.98
7879 10705 6.561519 ACCTAGCATTGTACAAGGTCTTAT 57.438 37.500 20.31 5.89 35.67 1.73
7880 10706 6.212791 AGAACCTAGCATTGTACAAGGTCTTA 59.787 38.462 20.31 10.45 39.64 2.10
7881 10707 4.910458 ACCTAGCATTGTACAAGGTCTT 57.090 40.909 20.31 9.92 35.67 3.01
7882 10708 4.532521 AGAACCTAGCATTGTACAAGGTCT 59.467 41.667 20.31 18.43 39.64 3.85
7883 10709 4.833390 AGAACCTAGCATTGTACAAGGTC 58.167 43.478 20.31 12.95 39.64 3.85
7884 10710 4.910458 AGAACCTAGCATTGTACAAGGT 57.090 40.909 20.31 15.10 42.35 3.50
7885 10711 6.640518 TCTAAGAACCTAGCATTGTACAAGG 58.359 40.000 15.70 15.70 0.00 3.61
7886 10712 9.817809 TTATCTAAGAACCTAGCATTGTACAAG 57.182 33.333 14.65 7.46 0.00 3.16
7894 10720 9.490379 CGGTTTATTTATCTAAGAACCTAGCAT 57.510 33.333 0.00 0.00 35.39 3.79
7895 10721 7.929785 CCGGTTTATTTATCTAAGAACCTAGCA 59.070 37.037 0.00 0.00 35.39 3.49
7896 10722 7.387122 CCCGGTTTATTTATCTAAGAACCTAGC 59.613 40.741 0.00 0.00 35.39 3.42
7897 10723 8.427276 ACCCGGTTTATTTATCTAAGAACCTAG 58.573 37.037 0.00 0.00 35.39 3.02
7898 10724 8.322905 ACCCGGTTTATTTATCTAAGAACCTA 57.677 34.615 0.00 0.00 35.39 3.08
7899 10725 7.204243 ACCCGGTTTATTTATCTAAGAACCT 57.796 36.000 0.00 0.00 35.39 3.50
7900 10726 7.870509 AACCCGGTTTATTTATCTAAGAACC 57.129 36.000 0.00 0.00 34.74 3.62
7903 10729 9.743581 AGAAAAACCCGGTTTATTTATCTAAGA 57.256 29.630 16.03 0.00 34.43 2.10
7904 10730 9.783256 CAGAAAAACCCGGTTTATTTATCTAAG 57.217 33.333 16.03 2.27 34.43 2.18
7905 10731 9.517868 TCAGAAAAACCCGGTTTATTTATCTAA 57.482 29.630 16.03 0.00 34.43 2.10
7906 10732 9.517868 TTCAGAAAAACCCGGTTTATTTATCTA 57.482 29.630 16.03 0.29 34.43 1.98
7907 10733 8.411991 TTCAGAAAAACCCGGTTTATTTATCT 57.588 30.769 16.03 11.30 34.43 1.98
7908 10734 7.274904 GCTTCAGAAAAACCCGGTTTATTTATC 59.725 37.037 16.03 9.49 34.43 1.75
7909 10735 7.094631 GCTTCAGAAAAACCCGGTTTATTTAT 58.905 34.615 16.03 2.60 34.43 1.40
7910 10736 6.040616 TGCTTCAGAAAAACCCGGTTTATTTA 59.959 34.615 16.03 0.00 34.43 1.40
7911 10737 5.163395 TGCTTCAGAAAAACCCGGTTTATTT 60.163 36.000 16.03 7.76 34.43 1.40
7912 10738 4.342665 TGCTTCAGAAAAACCCGGTTTATT 59.657 37.500 16.03 11.90 34.43 1.40
7913 10739 3.892588 TGCTTCAGAAAAACCCGGTTTAT 59.107 39.130 16.03 3.02 34.43 1.40
7914 10740 3.067040 GTGCTTCAGAAAAACCCGGTTTA 59.933 43.478 16.03 0.00 34.43 2.01
7915 10741 2.104170 TGCTTCAGAAAAACCCGGTTT 58.896 42.857 9.92 9.92 37.34 3.27
7916 10742 1.407618 GTGCTTCAGAAAAACCCGGTT 59.592 47.619 0.00 0.00 0.00 4.44
7917 10743 1.029681 GTGCTTCAGAAAAACCCGGT 58.970 50.000 0.00 0.00 0.00 5.28
7918 10744 1.001378 CTGTGCTTCAGAAAAACCCGG 60.001 52.381 0.00 0.00 46.27 5.73
7919 10745 1.001378 CCTGTGCTTCAGAAAAACCCG 60.001 52.381 10.22 0.00 46.27 5.28
7920 10746 2.031870 ACCTGTGCTTCAGAAAAACCC 58.968 47.619 10.22 0.00 46.27 4.11
7921 10747 3.084070 CACCTGTGCTTCAGAAAAACC 57.916 47.619 10.22 0.00 46.27 3.27
7934 10760 4.832248 TCCTGTAGAAATAAGCACCTGTG 58.168 43.478 0.00 0.00 0.00 3.66
7935 10761 4.777896 TCTCCTGTAGAAATAAGCACCTGT 59.222 41.667 0.00 0.00 0.00 4.00
7936 10762 5.127845 TCTCTCCTGTAGAAATAAGCACCTG 59.872 44.000 0.00 0.00 32.46 4.00
7937 10763 5.273208 TCTCTCCTGTAGAAATAAGCACCT 58.727 41.667 0.00 0.00 32.46 4.00
7938 10764 5.599999 TCTCTCCTGTAGAAATAAGCACC 57.400 43.478 0.00 0.00 32.46 5.01
7939 10765 5.465056 GCATCTCTCCTGTAGAAATAAGCAC 59.535 44.000 0.00 0.00 32.46 4.40
7940 10766 5.453903 GGCATCTCTCCTGTAGAAATAAGCA 60.454 44.000 0.00 0.00 32.46 3.91
7941 10767 4.994217 GGCATCTCTCCTGTAGAAATAAGC 59.006 45.833 0.00 0.00 32.46 3.09
7942 10768 6.418057 AGGCATCTCTCCTGTAGAAATAAG 57.582 41.667 0.00 0.00 32.46 1.73
7943 10769 7.914427 TTAGGCATCTCTCCTGTAGAAATAA 57.086 36.000 0.00 0.00 35.21 1.40
7944 10770 8.370940 CAATTAGGCATCTCTCCTGTAGAAATA 58.629 37.037 0.00 0.00 35.21 1.40
7945 10771 7.071698 TCAATTAGGCATCTCTCCTGTAGAAAT 59.928 37.037 0.00 0.00 35.21 2.17
7946 10772 6.384015 TCAATTAGGCATCTCTCCTGTAGAAA 59.616 38.462 0.00 0.00 35.21 2.52
7947 10773 5.899547 TCAATTAGGCATCTCTCCTGTAGAA 59.100 40.000 0.00 0.00 35.21 2.10
7948 10774 5.458595 TCAATTAGGCATCTCTCCTGTAGA 58.541 41.667 0.00 0.00 35.21 2.59
7949 10775 5.782047 CTCAATTAGGCATCTCTCCTGTAG 58.218 45.833 0.00 0.00 35.21 2.74
7950 10776 4.039730 GCTCAATTAGGCATCTCTCCTGTA 59.960 45.833 0.00 0.00 35.21 2.74
7951 10777 3.181456 GCTCAATTAGGCATCTCTCCTGT 60.181 47.826 0.00 0.00 35.21 4.00
7952 10778 3.401182 GCTCAATTAGGCATCTCTCCTG 58.599 50.000 0.00 0.00 35.21 3.86
7953 10779 2.036992 CGCTCAATTAGGCATCTCTCCT 59.963 50.000 0.00 0.00 37.72 3.69
7954 10780 2.224161 ACGCTCAATTAGGCATCTCTCC 60.224 50.000 0.00 0.00 0.00 3.71
7955 10781 3.056304 GACGCTCAATTAGGCATCTCTC 58.944 50.000 0.00 0.00 0.00 3.20
7956 10782 2.697751 AGACGCTCAATTAGGCATCTCT 59.302 45.455 0.00 0.00 0.00 3.10
7957 10783 3.104843 AGACGCTCAATTAGGCATCTC 57.895 47.619 0.00 0.00 0.00 2.75
7958 10784 3.243907 GGTAGACGCTCAATTAGGCATCT 60.244 47.826 5.88 5.88 35.23 2.90
7959 10785 3.060602 GGTAGACGCTCAATTAGGCATC 58.939 50.000 0.00 0.00 0.00 3.91
7960 10786 2.224305 GGGTAGACGCTCAATTAGGCAT 60.224 50.000 0.00 0.00 0.00 4.40
7961 10787 1.138266 GGGTAGACGCTCAATTAGGCA 59.862 52.381 0.00 0.00 0.00 4.75
7962 10788 1.413077 AGGGTAGACGCTCAATTAGGC 59.587 52.381 0.00 0.00 33.57 3.93
7963 10789 2.431057 ACAGGGTAGACGCTCAATTAGG 59.569 50.000 0.00 0.00 37.00 2.69
7964 10790 3.802948 ACAGGGTAGACGCTCAATTAG 57.197 47.619 0.00 0.00 37.00 1.73
7965 10791 4.018490 TGTACAGGGTAGACGCTCAATTA 58.982 43.478 0.00 0.00 37.00 1.40
7966 10792 2.829720 TGTACAGGGTAGACGCTCAATT 59.170 45.455 0.00 0.00 37.00 2.32
7967 10793 2.453521 TGTACAGGGTAGACGCTCAAT 58.546 47.619 0.00 0.00 37.00 2.57
7968 10794 1.913778 TGTACAGGGTAGACGCTCAA 58.086 50.000 0.00 0.00 37.00 3.02
7969 10795 1.542915 GTTGTACAGGGTAGACGCTCA 59.457 52.381 0.00 0.00 37.00 4.26
7970 10796 1.817447 AGTTGTACAGGGTAGACGCTC 59.183 52.381 0.00 0.00 37.00 5.03
7971 10797 1.920610 AGTTGTACAGGGTAGACGCT 58.079 50.000 0.00 0.00 39.95 5.07
7972 10798 2.738013 AAGTTGTACAGGGTAGACGC 57.262 50.000 0.00 0.00 0.00 5.19
7973 10799 5.831702 ATCTAAGTTGTACAGGGTAGACG 57.168 43.478 11.49 0.00 0.00 4.18
7974 10800 7.555554 TGTCTATCTAAGTTGTACAGGGTAGAC 59.444 40.741 17.94 17.94 36.50 2.59
7975 10801 7.636579 TGTCTATCTAAGTTGTACAGGGTAGA 58.363 38.462 11.60 11.60 0.00 2.59
7976 10802 7.876936 TGTCTATCTAAGTTGTACAGGGTAG 57.123 40.000 0.00 0.00 0.00 3.18
7977 10803 7.201884 GCATGTCTATCTAAGTTGTACAGGGTA 60.202 40.741 0.00 0.00 0.00 3.69
7978 10804 6.407074 GCATGTCTATCTAAGTTGTACAGGGT 60.407 42.308 0.00 0.00 0.00 4.34
7979 10805 5.986135 GCATGTCTATCTAAGTTGTACAGGG 59.014 44.000 0.00 0.00 0.00 4.45
7980 10806 6.810911 AGCATGTCTATCTAAGTTGTACAGG 58.189 40.000 0.00 0.00 0.00 4.00
7981 10807 8.709386 AAAGCATGTCTATCTAAGTTGTACAG 57.291 34.615 0.00 0.00 0.00 2.74
7982 10808 8.935844 CAAAAGCATGTCTATCTAAGTTGTACA 58.064 33.333 0.00 0.00 0.00 2.90
7983 10809 8.936864 ACAAAAGCATGTCTATCTAAGTTGTAC 58.063 33.333 0.00 0.00 0.00 2.90
7984 10810 9.502091 AACAAAAGCATGTCTATCTAAGTTGTA 57.498 29.630 0.00 0.00 31.81 2.41
7985 10811 7.986085 ACAAAAGCATGTCTATCTAAGTTGT 57.014 32.000 0.00 0.00 0.00 3.32
7986 10812 9.334693 GAAACAAAAGCATGTCTATCTAAGTTG 57.665 33.333 0.00 0.00 31.81 3.16
7987 10813 9.066892 TGAAACAAAAGCATGTCTATCTAAGTT 57.933 29.630 0.00 0.00 31.81 2.66
7988 10814 8.621532 TGAAACAAAAGCATGTCTATCTAAGT 57.378 30.769 0.00 0.00 31.81 2.24
7989 10815 9.897744 TTTGAAACAAAAGCATGTCTATCTAAG 57.102 29.630 0.00 0.00 31.81 2.18
7992 10818 9.415544 GAATTTGAAACAAAAGCATGTCTATCT 57.584 29.630 0.00 0.00 31.81 1.98
7993 10819 9.415544 AGAATTTGAAACAAAAGCATGTCTATC 57.584 29.630 0.00 0.00 31.81 2.08
7995 10821 9.677567 GTAGAATTTGAAACAAAAGCATGTCTA 57.322 29.630 0.00 0.00 31.81 2.59
7996 10822 8.416329 AGTAGAATTTGAAACAAAAGCATGTCT 58.584 29.630 0.00 0.00 31.81 3.41
7997 10823 8.482429 CAGTAGAATTTGAAACAAAAGCATGTC 58.518 33.333 0.00 0.00 31.81 3.06
7998 10824 7.981225 ACAGTAGAATTTGAAACAAAAGCATGT 59.019 29.630 0.00 0.00 34.24 3.21
7999 10825 8.356533 ACAGTAGAATTTGAAACAAAAGCATG 57.643 30.769 0.00 0.00 0.00 4.06
8000 10826 8.947055 AACAGTAGAATTTGAAACAAAAGCAT 57.053 26.923 0.00 0.00 0.00 3.79
8001 10827 8.770438 AAACAGTAGAATTTGAAACAAAAGCA 57.230 26.923 0.00 0.00 0.00 3.91
8025 10851 4.965283 AGGGGGAACATCATCCTAAAAA 57.035 40.909 0.00 0.00 39.57 1.94
8026 10852 4.141251 GCTAGGGGGAACATCATCCTAAAA 60.141 45.833 0.00 0.00 39.57 1.52
8027 10853 3.394606 GCTAGGGGGAACATCATCCTAAA 59.605 47.826 0.00 0.00 39.57 1.85
8028 10854 2.979678 GCTAGGGGGAACATCATCCTAA 59.020 50.000 0.00 0.00 39.57 2.69
8029 10855 2.182312 AGCTAGGGGGAACATCATCCTA 59.818 50.000 0.00 0.00 39.57 2.94
8030 10856 1.061033 AGCTAGGGGGAACATCATCCT 60.061 52.381 0.00 0.00 39.57 3.24
8031 10857 1.439543 AGCTAGGGGGAACATCATCC 58.560 55.000 0.00 0.00 38.86 3.51
8032 10858 3.584733 AAAGCTAGGGGGAACATCATC 57.415 47.619 0.00 0.00 0.00 2.92
8033 10859 5.103515 ACAATAAAGCTAGGGGGAACATCAT 60.104 40.000 0.00 0.00 0.00 2.45
8034 10860 4.229582 ACAATAAAGCTAGGGGGAACATCA 59.770 41.667 0.00 0.00 0.00 3.07
8035 10861 4.793201 ACAATAAAGCTAGGGGGAACATC 58.207 43.478 0.00 0.00 0.00 3.06
8036 10862 4.881157 ACAATAAAGCTAGGGGGAACAT 57.119 40.909 0.00 0.00 0.00 2.71
8037 10863 4.668138 AACAATAAAGCTAGGGGGAACA 57.332 40.909 0.00 0.00 0.00 3.18
8038 10864 5.014202 TGAAACAATAAAGCTAGGGGGAAC 58.986 41.667 0.00 0.00 0.00 3.62
8039 10865 5.014755 TCTGAAACAATAAAGCTAGGGGGAA 59.985 40.000 0.00 0.00 0.00 3.97
8040 10866 4.538490 TCTGAAACAATAAAGCTAGGGGGA 59.462 41.667 0.00 0.00 0.00 4.81
8041 10867 4.855340 TCTGAAACAATAAAGCTAGGGGG 58.145 43.478 0.00 0.00 0.00 5.40
8042 10868 5.888161 ACATCTGAAACAATAAAGCTAGGGG 59.112 40.000 0.00 0.00 0.00 4.79
8043 10869 8.506168 TTACATCTGAAACAATAAAGCTAGGG 57.494 34.615 0.00 0.00 0.00 3.53
8044 10870 9.941664 CATTACATCTGAAACAATAAAGCTAGG 57.058 33.333 0.00 0.00 0.00 3.02
8047 10873 9.846248 GTTCATTACATCTGAAACAATAAAGCT 57.154 29.630 0.00 0.00 34.59 3.74
8048 10874 8.788813 CGTTCATTACATCTGAAACAATAAAGC 58.211 33.333 0.00 0.00 34.59 3.51
8051 10877 9.986833 CATCGTTCATTACATCTGAAACAATAA 57.013 29.630 0.00 0.00 34.59 1.40
8052 10878 8.122330 GCATCGTTCATTACATCTGAAACAATA 58.878 33.333 0.00 0.00 34.59 1.90
8053 10879 6.968904 GCATCGTTCATTACATCTGAAACAAT 59.031 34.615 0.00 0.00 34.59 2.71
8054 10880 6.072783 TGCATCGTTCATTACATCTGAAACAA 60.073 34.615 0.00 0.00 34.59 2.83
8055 10881 5.411053 TGCATCGTTCATTACATCTGAAACA 59.589 36.000 0.00 0.00 34.59 2.83
8056 10882 5.868257 TGCATCGTTCATTACATCTGAAAC 58.132 37.500 0.00 0.00 34.59 2.78
8057 10883 6.509997 CGATGCATCGTTCATTACATCTGAAA 60.510 38.462 35.19 0.00 44.74 2.69
8058 10884 5.050837 CGATGCATCGTTCATTACATCTGAA 60.051 40.000 35.19 0.00 44.74 3.02
8059 10885 4.445385 CGATGCATCGTTCATTACATCTGA 59.555 41.667 35.19 0.00 44.74 3.27
8060 10886 4.695200 CGATGCATCGTTCATTACATCTG 58.305 43.478 35.19 7.42 44.74 2.90
8061 10887 4.979564 CGATGCATCGTTCATTACATCT 57.020 40.909 35.19 0.00 44.74 2.90
8074 10900 2.470257 GCAAAATAAGCAGCGATGCATC 59.530 45.455 29.24 17.10 37.25 3.91
8075 10901 2.159212 TGCAAAATAAGCAGCGATGCAT 60.159 40.909 29.24 19.55 37.40 3.96
8076 10902 1.201880 TGCAAAATAAGCAGCGATGCA 59.798 42.857 29.24 8.54 39.73 3.96
8077 10903 1.912001 TGCAAAATAAGCAGCGATGC 58.088 45.000 19.88 19.88 37.02 3.91
8078 10904 6.254157 ACTTTATTGCAAAATAAGCAGCGATG 59.746 34.615 1.71 0.00 43.75 3.84
8079 10905 6.254157 CACTTTATTGCAAAATAAGCAGCGAT 59.746 34.615 1.71 0.00 43.75 4.58
8080 10906 5.572511 CACTTTATTGCAAAATAAGCAGCGA 59.427 36.000 1.71 0.00 43.75 4.93
8081 10907 5.345741 ACACTTTATTGCAAAATAAGCAGCG 59.654 36.000 1.71 0.92 43.75 5.18
8082 10908 6.527957 CACACTTTATTGCAAAATAAGCAGC 58.472 36.000 1.71 0.00 43.75 5.25
8083 10909 6.401367 GGCACACTTTATTGCAAAATAAGCAG 60.401 38.462 1.71 6.64 43.75 4.24
8084 10910 5.407995 GGCACACTTTATTGCAAAATAAGCA 59.592 36.000 1.71 0.00 40.75 3.91
8085 10911 5.407995 TGGCACACTTTATTGCAAAATAAGC 59.592 36.000 1.71 0.57 40.75 3.09
8095 10921 8.998266 GGAAAGCATTCATGGCACACTTTATTG 61.998 40.741 3.82 0.00 37.29 1.90
8096 10922 7.071509 GGAAAGCATTCATGGCACACTTTATT 61.072 38.462 3.82 0.00 37.29 1.40
8097 10923 5.625197 GGAAAGCATTCATGGCACACTTTAT 60.625 40.000 3.82 0.00 37.29 1.40
8098 10924 4.321899 GGAAAGCATTCATGGCACACTTTA 60.322 41.667 3.82 0.00 37.29 1.85
8099 10925 3.555586 GGAAAGCATTCATGGCACACTTT 60.556 43.478 3.82 0.00 37.29 2.66
8100 10926 2.028748 GGAAAGCATTCATGGCACACTT 60.029 45.455 3.82 0.00 37.29 3.16
8101 10927 1.547372 GGAAAGCATTCATGGCACACT 59.453 47.619 3.82 0.00 37.29 3.55
8102 10928 1.404583 GGGAAAGCATTCATGGCACAC 60.405 52.381 3.82 0.00 37.29 3.82
8103 10929 0.896923 GGGAAAGCATTCATGGCACA 59.103 50.000 3.82 0.00 37.29 4.57
8104 10930 1.135721 GAGGGAAAGCATTCATGGCAC 59.864 52.381 3.82 0.00 37.29 5.01
8105 10931 1.477553 GAGGGAAAGCATTCATGGCA 58.522 50.000 3.82 0.00 37.29 4.92
8106 10932 0.383231 CGAGGGAAAGCATTCATGGC 59.617 55.000 3.82 0.00 37.29 4.40
8107 10933 2.042686 TCGAGGGAAAGCATTCATGG 57.957 50.000 3.82 0.00 37.29 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.