Multiple sequence alignment - TraesCS5B01G210000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G210000 chr5B 100.000 2684 0 0 1 2684 379904190 379901507 0.000000e+00 4957
1 TraesCS5B01G210000 chr5B 84.298 363 39 9 2339 2683 576165998 576165636 3.310000e-89 339
2 TraesCS5B01G210000 chr5A 87.450 1514 99 37 455 1925 429475805 429477270 0.000000e+00 1659
3 TraesCS5B01G210000 chr5A 89.865 296 20 4 2004 2297 429477290 429477577 3.260000e-99 372
4 TraesCS5B01G210000 chr5A 81.050 343 44 10 2347 2670 554291694 554292034 1.230000e-63 254
5 TraesCS5B01G210000 chr5A 87.912 182 11 6 105 276 429474811 429474991 1.260000e-48 204
6 TraesCS5B01G210000 chr5D 92.260 1124 47 17 823 1925 327214696 327213592 0.000000e+00 1557
7 TraesCS5B01G210000 chr5D 85.517 290 11 7 2010 2299 327213545 327213287 9.470000e-70 274
8 TraesCS5B01G210000 chr5D 95.050 101 5 0 2212 2312 327209819 327209719 2.770000e-35 159
9 TraesCS5B01G210000 chr2B 87.896 347 33 7 2345 2684 631998763 631999107 1.500000e-107 399
10 TraesCS5B01G210000 chr3A 85.359 362 35 7 2341 2684 743450828 743451189 2.540000e-95 359
11 TraesCS5B01G210000 chr7B 85.154 357 36 5 2345 2684 585910900 585910544 1.530000e-92 350
12 TraesCS5B01G210000 chr7B 84.703 353 40 10 2342 2684 80087930 80088278 9.200000e-90 340
13 TraesCS5B01G210000 chr4A 82.849 344 51 7 2345 2682 543410036 543409695 4.340000e-78 302
14 TraesCS5B01G210000 chr2D 82.102 352 55 5 2336 2680 431917509 431917859 7.270000e-76 294
15 TraesCS5B01G210000 chr4B 81.644 365 44 12 2338 2682 616750168 616749807 5.660000e-72 281
16 TraesCS5B01G210000 chr4B 83.217 286 29 9 2416 2683 642332662 642332946 7.420000e-61 244
17 TraesCS5B01G210000 chr7D 81.982 333 50 8 2345 2669 166510573 166510903 9.470000e-70 274
18 TraesCS5B01G210000 chr7D 81.792 346 41 8 2345 2670 147816457 147816114 1.220000e-68 270
19 TraesCS5B01G210000 chr4D 81.395 344 43 9 2345 2668 29639804 29640146 7.370000e-66 261


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G210000 chr5B 379901507 379904190 2683 True 4957.000000 4957 100.000000 1 2684 1 chr5B.!!$R1 2683
1 TraesCS5B01G210000 chr5A 429474811 429477577 2766 False 745.000000 1659 88.409000 105 2297 3 chr5A.!!$F2 2192
2 TraesCS5B01G210000 chr5D 327209719 327214696 4977 True 663.333333 1557 90.942333 823 2312 3 chr5D.!!$R1 1489

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
91 92 0.172803 GCTCGAACCCGACACAGTAT 59.827 55.0 0.0 0.0 40.3 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 2570 0.872388 AACCCAGAAACGCATCGAAC 59.128 50.0 0.0 0.0 0.0 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.507524 AAGAGTATATACCCAAAAAGTCAAGC 57.492 34.615 9.32 0.00 0.00 4.01
27 28 7.862675 AGAGTATATACCCAAAAAGTCAAGCT 58.137 34.615 9.32 0.00 0.00 3.74
28 29 8.989131 AGAGTATATACCCAAAAAGTCAAGCTA 58.011 33.333 9.32 0.00 0.00 3.32
29 30 8.959705 AGTATATACCCAAAAAGTCAAGCTAC 57.040 34.615 9.32 0.00 0.00 3.58
30 31 7.991460 AGTATATACCCAAAAAGTCAAGCTACC 59.009 37.037 9.32 0.00 0.00 3.18
31 32 3.306472 ACCCAAAAAGTCAAGCTACCA 57.694 42.857 0.00 0.00 0.00 3.25
32 33 3.222603 ACCCAAAAAGTCAAGCTACCAG 58.777 45.455 0.00 0.00 0.00 4.00
33 34 2.558359 CCCAAAAAGTCAAGCTACCAGG 59.442 50.000 0.00 0.00 0.00 4.45
34 35 2.029918 CCAAAAAGTCAAGCTACCAGGC 60.030 50.000 0.00 0.00 0.00 4.85
35 36 2.622942 CAAAAAGTCAAGCTACCAGGCA 59.377 45.455 0.00 0.00 34.17 4.75
36 37 2.656947 AAAGTCAAGCTACCAGGCAA 57.343 45.000 0.00 0.00 34.17 4.52
37 38 2.887151 AAGTCAAGCTACCAGGCAAT 57.113 45.000 0.00 0.00 34.17 3.56
38 39 2.887151 AGTCAAGCTACCAGGCAATT 57.113 45.000 0.00 0.00 34.17 2.32
39 40 4.301072 AAGTCAAGCTACCAGGCAATTA 57.699 40.909 0.00 0.00 34.17 1.40
40 41 4.301072 AGTCAAGCTACCAGGCAATTAA 57.699 40.909 0.00 0.00 34.17 1.40
41 42 4.662278 AGTCAAGCTACCAGGCAATTAAA 58.338 39.130 0.00 0.00 34.17 1.52
42 43 5.264395 AGTCAAGCTACCAGGCAATTAAAT 58.736 37.500 0.00 0.00 34.17 1.40
43 44 6.423182 AGTCAAGCTACCAGGCAATTAAATA 58.577 36.000 0.00 0.00 34.17 1.40
44 45 6.543831 AGTCAAGCTACCAGGCAATTAAATAG 59.456 38.462 0.00 0.00 34.17 1.73
45 46 5.299279 TCAAGCTACCAGGCAATTAAATAGC 59.701 40.000 0.00 0.00 34.99 2.97
46 47 5.053978 AGCTACCAGGCAATTAAATAGCT 57.946 39.130 0.00 0.00 39.18 3.32
47 48 5.449553 AGCTACCAGGCAATTAAATAGCTT 58.550 37.500 0.00 0.00 40.68 3.74
48 49 5.300286 AGCTACCAGGCAATTAAATAGCTTG 59.700 40.000 0.00 0.00 40.68 4.01
49 50 5.299279 GCTACCAGGCAATTAAATAGCTTGA 59.701 40.000 0.00 0.00 37.53 3.02
50 51 6.015940 GCTACCAGGCAATTAAATAGCTTGAT 60.016 38.462 0.00 0.00 37.53 2.57
51 52 6.396829 ACCAGGCAATTAAATAGCTTGATC 57.603 37.500 0.00 0.00 37.53 2.92
52 53 5.302823 ACCAGGCAATTAAATAGCTTGATCC 59.697 40.000 0.00 0.00 37.53 3.36
53 54 5.537674 CCAGGCAATTAAATAGCTTGATCCT 59.462 40.000 0.00 0.00 37.53 3.24
54 55 6.716628 CCAGGCAATTAAATAGCTTGATCCTA 59.283 38.462 0.00 0.00 37.53 2.94
55 56 7.231317 CCAGGCAATTAAATAGCTTGATCCTAA 59.769 37.037 0.00 0.00 37.53 2.69
56 57 8.632679 CAGGCAATTAAATAGCTTGATCCTAAA 58.367 33.333 0.00 0.00 37.53 1.85
57 58 9.200817 AGGCAATTAAATAGCTTGATCCTAAAA 57.799 29.630 0.00 0.00 0.00 1.52
58 59 9.816354 GGCAATTAAATAGCTTGATCCTAAAAA 57.184 29.630 0.00 0.00 0.00 1.94
80 81 6.838198 AAAACCAATTAAAAAGCTCGAACC 57.162 33.333 0.00 0.00 0.00 3.62
81 82 4.514781 ACCAATTAAAAAGCTCGAACCC 57.485 40.909 0.00 0.00 0.00 4.11
82 83 3.057806 ACCAATTAAAAAGCTCGAACCCG 60.058 43.478 0.00 0.00 37.07 5.28
83 84 3.189702 CCAATTAAAAAGCTCGAACCCGA 59.810 43.478 0.00 0.00 43.35 5.14
84 85 4.156182 CAATTAAAAAGCTCGAACCCGAC 58.844 43.478 0.00 0.00 40.30 4.79
85 86 2.529780 TAAAAAGCTCGAACCCGACA 57.470 45.000 0.00 0.00 40.30 4.35
86 87 0.942252 AAAAAGCTCGAACCCGACAC 59.058 50.000 0.00 0.00 40.30 3.67
87 88 0.179067 AAAAGCTCGAACCCGACACA 60.179 50.000 0.00 0.00 40.30 3.72
88 89 0.600255 AAAGCTCGAACCCGACACAG 60.600 55.000 0.00 0.00 40.30 3.66
89 90 1.745320 AAGCTCGAACCCGACACAGT 61.745 55.000 0.00 0.00 40.30 3.55
90 91 0.892358 AGCTCGAACCCGACACAGTA 60.892 55.000 0.00 0.00 40.30 2.74
91 92 0.172803 GCTCGAACCCGACACAGTAT 59.827 55.000 0.00 0.00 40.30 2.12
92 93 1.403780 GCTCGAACCCGACACAGTATT 60.404 52.381 0.00 0.00 40.30 1.89
93 94 2.929592 GCTCGAACCCGACACAGTATTT 60.930 50.000 0.00 0.00 40.30 1.40
94 95 2.921754 CTCGAACCCGACACAGTATTTC 59.078 50.000 0.00 0.00 40.30 2.17
95 96 2.296752 TCGAACCCGACACAGTATTTCA 59.703 45.455 0.00 0.00 40.30 2.69
96 97 3.061322 CGAACCCGACACAGTATTTCAA 58.939 45.455 0.00 0.00 38.22 2.69
97 98 3.122948 CGAACCCGACACAGTATTTCAAG 59.877 47.826 0.00 0.00 38.22 3.02
98 99 4.312443 GAACCCGACACAGTATTTCAAGA 58.688 43.478 0.00 0.00 0.00 3.02
99 100 4.345859 ACCCGACACAGTATTTCAAGAA 57.654 40.909 0.00 0.00 0.00 2.52
100 101 4.906618 ACCCGACACAGTATTTCAAGAAT 58.093 39.130 0.00 0.00 0.00 2.40
101 102 4.695455 ACCCGACACAGTATTTCAAGAATG 59.305 41.667 0.00 0.00 0.00 2.67
102 103 4.094887 CCCGACACAGTATTTCAAGAATGG 59.905 45.833 0.00 0.00 0.00 3.16
103 104 4.094887 CCGACACAGTATTTCAAGAATGGG 59.905 45.833 0.00 0.00 0.00 4.00
125 126 0.545787 ACAATGGACGTGGTAGGGGA 60.546 55.000 0.00 0.00 0.00 4.81
142 143 3.265479 AGGGGAGAAATCTCAAGACTTGG 59.735 47.826 15.13 6.37 44.60 3.61
192 193 8.717821 TGTTACTCTGTACACTAATTGAATTGC 58.282 33.333 0.00 0.00 0.00 3.56
204 205 9.588774 CACTAATTGAATTGCAAAAATGTCTTG 57.411 29.630 1.71 0.00 40.48 3.02
224 225 8.528643 TGTCTTGCATTAGTGTACATAAGTAGT 58.471 33.333 0.00 0.00 0.00 2.73
277 288 8.445275 TCTGAACATAGCAGTAAAAGTTTTCA 57.555 30.769 3.60 0.00 34.98 2.69
280 291 9.296400 TGAACATAGCAGTAAAAGTTTTCAAAC 57.704 29.630 3.60 0.00 39.17 2.93
298 343 8.600449 TTTCAAACTTTAATTCCGCATTGATT 57.400 26.923 0.00 0.00 0.00 2.57
299 344 7.810766 TCAAACTTTAATTCCGCATTGATTC 57.189 32.000 0.00 0.00 0.00 2.52
313 358 6.348458 CCGCATTGATTCTTGAGTAGAAAACA 60.348 38.462 0.00 0.00 45.62 2.83
314 359 6.521133 CGCATTGATTCTTGAGTAGAAAACAC 59.479 38.462 0.00 0.00 45.62 3.32
315 360 6.803807 GCATTGATTCTTGAGTAGAAAACACC 59.196 38.462 0.00 0.00 45.62 4.16
316 361 7.522073 GCATTGATTCTTGAGTAGAAAACACCA 60.522 37.037 0.00 0.00 45.62 4.17
317 362 7.873719 TTGATTCTTGAGTAGAAAACACCAA 57.126 32.000 0.00 0.00 45.62 3.67
318 363 7.259290 TGATTCTTGAGTAGAAAACACCAAC 57.741 36.000 0.00 0.00 45.62 3.77
337 552 4.336433 CCAACATAAGGTCCTTGTAGCATG 59.664 45.833 14.84 11.48 0.00 4.06
356 571 4.978083 ATGAAATGAGAGTCCAACATGC 57.022 40.909 0.00 0.00 0.00 4.06
357 572 3.753815 TGAAATGAGAGTCCAACATGCA 58.246 40.909 0.00 0.00 0.00 3.96
358 573 3.503363 TGAAATGAGAGTCCAACATGCAC 59.497 43.478 0.00 0.00 0.00 4.57
371 599 3.361281 ACATGCACCTCACTCATTCAT 57.639 42.857 0.00 0.00 0.00 2.57
373 601 3.442625 ACATGCACCTCACTCATTCATTG 59.557 43.478 0.00 0.00 0.00 2.82
392 620 1.068954 TGCGTGCATTGCGTGAATAAA 60.069 42.857 3.84 0.00 34.24 1.40
395 623 2.840176 CGTGCATTGCGTGAATAAAGTC 59.160 45.455 3.84 0.00 0.00 3.01
396 624 3.171277 GTGCATTGCGTGAATAAAGTCC 58.829 45.455 3.84 0.00 0.00 3.85
411 946 2.521105 AGTCCAAAGGTGTACGTGAC 57.479 50.000 0.00 0.00 0.00 3.67
412 947 1.758280 AGTCCAAAGGTGTACGTGACA 59.242 47.619 0.00 0.00 34.94 3.58
413 948 2.168936 AGTCCAAAGGTGTACGTGACAA 59.831 45.455 0.00 0.00 40.66 3.18
414 949 3.135994 GTCCAAAGGTGTACGTGACAAT 58.864 45.455 0.00 0.00 40.66 2.71
415 950 3.562557 GTCCAAAGGTGTACGTGACAATT 59.437 43.478 0.00 0.00 40.66 2.32
441 976 5.710513 ACTCAAGCTCATTGTAAATGCAA 57.289 34.783 0.00 0.00 40.05 4.08
447 982 7.874016 TCAAGCTCATTGTAAATGCAATTTTCT 59.126 29.630 0.00 0.00 40.90 2.52
469 1119 7.338800 TCTGCTTTCAAAGATTTCTTTCACT 57.661 32.000 0.00 0.00 43.72 3.41
478 1128 4.410099 AGATTTCTTTCACTGGATGCCAA 58.590 39.130 0.00 0.00 30.80 4.52
484 1134 3.940209 TTCACTGGATGCCAATTTCAC 57.060 42.857 0.00 0.00 30.80 3.18
487 1137 1.176527 CTGGATGCCAATTTCACCGT 58.823 50.000 0.00 0.00 30.80 4.83
523 1174 9.039870 CTCTAATTGAGAAATAGTCATGTGGAC 57.960 37.037 0.00 0.00 45.39 4.02
543 1194 0.898320 AGCTGTACCGAAGAGCATGT 59.102 50.000 9.05 0.00 46.85 3.21
545 1196 2.076863 GCTGTACCGAAGAGCATGTTT 58.923 47.619 0.00 0.00 43.90 2.83
546 1197 2.159653 GCTGTACCGAAGAGCATGTTTG 60.160 50.000 0.00 0.00 43.90 2.93
550 1201 2.146342 ACCGAAGAGCATGTTTGTGAG 58.854 47.619 0.00 0.00 0.00 3.51
552 1203 3.005554 CCGAAGAGCATGTTTGTGAGAT 58.994 45.455 0.00 0.00 0.00 2.75
554 1205 4.400845 CGAAGAGCATGTTTGTGAGATTG 58.599 43.478 0.00 0.00 0.00 2.67
555 1206 4.083643 CGAAGAGCATGTTTGTGAGATTGT 60.084 41.667 0.00 0.00 0.00 2.71
586 1238 2.517609 CCTACACTAGGTGAGGGGC 58.482 63.158 4.62 0.00 41.18 5.80
596 1248 0.255033 GGTGAGGGGCGATAAGGTTT 59.745 55.000 0.00 0.00 0.00 3.27
597 1249 1.664873 GTGAGGGGCGATAAGGTTTC 58.335 55.000 0.00 0.00 0.00 2.78
601 1253 2.104963 GAGGGGCGATAAGGTTTCTGAT 59.895 50.000 0.00 0.00 0.00 2.90
602 1254 2.158755 AGGGGCGATAAGGTTTCTGATG 60.159 50.000 0.00 0.00 0.00 3.07
606 1258 2.219674 GCGATAAGGTTTCTGATGAGCG 59.780 50.000 0.00 0.00 0.00 5.03
623 1275 0.239347 GCGTGATTGCTTGCTCAAGT 59.761 50.000 10.86 0.00 40.45 3.16
625 1277 2.578495 CGTGATTGCTTGCTCAAGTTC 58.422 47.619 10.86 6.86 40.45 3.01
628 1280 3.076621 TGATTGCTTGCTCAAGTTCGAT 58.923 40.909 10.86 1.66 40.45 3.59
632 1284 3.398406 TGCTTGCTCAAGTTCGATTACA 58.602 40.909 10.86 0.00 40.45 2.41
633 1285 4.002982 TGCTTGCTCAAGTTCGATTACAT 58.997 39.130 10.86 0.00 40.45 2.29
634 1286 4.093408 TGCTTGCTCAAGTTCGATTACATC 59.907 41.667 10.86 0.00 40.45 3.06
635 1287 4.331168 GCTTGCTCAAGTTCGATTACATCT 59.669 41.667 10.86 0.00 40.45 2.90
636 1288 5.163814 GCTTGCTCAAGTTCGATTACATCTT 60.164 40.000 10.86 0.00 40.45 2.40
637 1289 6.621596 GCTTGCTCAAGTTCGATTACATCTTT 60.622 38.462 10.86 0.00 40.45 2.52
638 1290 6.169419 TGCTCAAGTTCGATTACATCTTTG 57.831 37.500 0.00 0.00 0.00 2.77
639 1291 5.931724 TGCTCAAGTTCGATTACATCTTTGA 59.068 36.000 0.00 0.00 0.00 2.69
640 1292 6.128553 TGCTCAAGTTCGATTACATCTTTGAC 60.129 38.462 0.00 0.00 0.00 3.18
642 1294 6.153756 TCAAGTTCGATTACATCTTTGACGA 58.846 36.000 0.00 0.00 0.00 4.20
643 1295 6.089016 TCAAGTTCGATTACATCTTTGACGAC 59.911 38.462 0.00 0.00 0.00 4.34
645 1297 3.431856 TCGATTACATCTTTGACGACCG 58.568 45.455 0.00 0.00 0.00 4.79
646 1298 3.127376 TCGATTACATCTTTGACGACCGA 59.873 43.478 0.00 0.00 0.00 4.69
647 1299 3.239941 CGATTACATCTTTGACGACCGAC 59.760 47.826 0.00 0.00 0.00 4.79
648 1300 2.642139 TACATCTTTGACGACCGACC 57.358 50.000 0.00 0.00 0.00 4.79
649 1301 0.677288 ACATCTTTGACGACCGACCA 59.323 50.000 0.00 0.00 0.00 4.02
650 1302 1.275291 ACATCTTTGACGACCGACCAT 59.725 47.619 0.00 0.00 0.00 3.55
651 1303 1.927174 CATCTTTGACGACCGACCATC 59.073 52.381 0.00 0.00 0.00 3.51
652 1304 0.245539 TCTTTGACGACCGACCATCC 59.754 55.000 0.00 0.00 0.00 3.51
653 1305 0.246635 CTTTGACGACCGACCATCCT 59.753 55.000 0.00 0.00 0.00 3.24
654 1306 1.475280 CTTTGACGACCGACCATCCTA 59.525 52.381 0.00 0.00 0.00 2.94
655 1307 0.813184 TTGACGACCGACCATCCTAC 59.187 55.000 0.00 0.00 0.00 3.18
656 1308 1.033746 TGACGACCGACCATCCTACC 61.034 60.000 0.00 0.00 0.00 3.18
657 1309 1.732417 GACGACCGACCATCCTACCC 61.732 65.000 0.00 0.00 0.00 3.69
658 1310 2.496291 CGACCGACCATCCTACCCC 61.496 68.421 0.00 0.00 0.00 4.95
659 1311 2.041197 ACCGACCATCCTACCCCC 60.041 66.667 0.00 0.00 0.00 5.40
660 1312 2.285868 CCGACCATCCTACCCCCT 59.714 66.667 0.00 0.00 0.00 4.79
661 1313 1.837499 CCGACCATCCTACCCCCTC 60.837 68.421 0.00 0.00 0.00 4.30
664 1316 1.077334 CGACCATCCTACCCCCTCTAT 59.923 57.143 0.00 0.00 0.00 1.98
666 1318 2.111972 GACCATCCTACCCCCTCTATGA 59.888 54.545 0.00 0.00 0.00 2.15
671 1323 3.858135 TCCTACCCCCTCTATGATGAAC 58.142 50.000 0.00 0.00 0.00 3.18
676 1328 1.270518 CCCCTCTATGATGAACGGCTG 60.271 57.143 0.00 0.00 0.00 4.85
679 1331 0.459899 TCTATGATGAACGGCTGCGT 59.540 50.000 0.00 0.00 0.00 5.24
683 1335 1.083806 TGATGAACGGCTGCGTCATC 61.084 55.000 23.70 23.70 38.06 2.92
692 1344 0.950555 GCTGCGTCATCTTCACCACA 60.951 55.000 0.00 0.00 0.00 4.17
696 1348 2.076100 GCGTCATCTTCACCACAATGA 58.924 47.619 0.00 0.00 0.00 2.57
701 1353 5.615544 CGTCATCTTCACCACAATGAAACTC 60.616 44.000 0.00 0.00 38.12 3.01
702 1354 5.239306 GTCATCTTCACCACAATGAAACTCA 59.761 40.000 0.00 0.00 38.12 3.41
703 1355 6.005823 TCATCTTCACCACAATGAAACTCAT 58.994 36.000 0.00 0.00 39.09 2.90
704 1356 7.119699 GTCATCTTCACCACAATGAAACTCATA 59.880 37.037 0.00 0.00 35.76 2.15
705 1357 7.830697 TCATCTTCACCACAATGAAACTCATAT 59.169 33.333 0.00 0.00 35.76 1.78
706 1358 7.381766 TCTTCACCACAATGAAACTCATATG 57.618 36.000 0.00 0.00 35.76 1.78
707 1359 6.942005 TCTTCACCACAATGAAACTCATATGT 59.058 34.615 1.90 0.00 35.76 2.29
708 1360 7.448161 TCTTCACCACAATGAAACTCATATGTT 59.552 33.333 1.90 0.00 35.76 2.71
709 1361 7.144722 TCACCACAATGAAACTCATATGTTC 57.855 36.000 1.90 0.21 35.76 3.18
710 1362 6.942005 TCACCACAATGAAACTCATATGTTCT 59.058 34.615 1.90 0.00 35.76 3.01
711 1363 7.025365 CACCACAATGAAACTCATATGTTCTG 58.975 38.462 1.90 0.00 35.76 3.02
712 1364 6.942005 ACCACAATGAAACTCATATGTTCTGA 59.058 34.615 1.90 0.00 35.76 3.27
713 1365 7.448161 ACCACAATGAAACTCATATGTTCTGAA 59.552 33.333 1.90 0.00 35.76 3.02
714 1366 8.464404 CCACAATGAAACTCATATGTTCTGAAT 58.536 33.333 1.90 0.00 35.76 2.57
734 1386 6.413892 TGAATATCTCTGTTGGCATGTGTTA 58.586 36.000 0.00 0.00 0.00 2.41
757 1409 3.189287 CGGGGCATATGCAAAGTCTATTC 59.811 47.826 28.07 7.31 44.36 1.75
769 1421 7.140705 TGCAAAGTCTATTCTGTGTGATTTTG 58.859 34.615 0.00 0.00 38.38 2.44
772 1424 5.316167 AGTCTATTCTGTGTGATTTTGGCA 58.684 37.500 0.00 0.00 0.00 4.92
778 1430 3.253921 TCTGTGTGATTTTGGCATGTCAG 59.746 43.478 0.00 0.00 0.00 3.51
790 1442 2.412089 GGCATGTCAGTAAAGTCGTGAC 59.588 50.000 0.00 0.00 40.89 3.67
795 1447 4.224433 TGTCAGTAAAGTCGTGACGAATC 58.776 43.478 10.12 0.00 42.98 2.52
807 1459 4.919168 TCGTGACGAATCTGAATTAAACGT 59.081 37.500 4.69 0.00 31.06 3.99
808 1460 6.032775 GTCGTGACGAATCTGAATTAAACGTA 59.967 38.462 10.12 0.00 37.72 3.57
809 1461 6.581919 TCGTGACGAATCTGAATTAAACGTAA 59.418 34.615 4.69 0.00 31.06 3.18
928 1610 7.281100 GGATCTCCTGTAAACAATTTACTCCAG 59.719 40.741 11.59 5.77 44.46 3.86
929 1611 7.074653 TCTCCTGTAAACAATTTACTCCAGT 57.925 36.000 11.59 0.00 44.46 4.00
930 1612 8.197592 TCTCCTGTAAACAATTTACTCCAGTA 57.802 34.615 11.59 0.00 44.46 2.74
931 1613 8.653191 TCTCCTGTAAACAATTTACTCCAGTAA 58.347 33.333 11.59 0.00 44.46 2.24
994 1676 1.339727 GCCCAACCTCCGTTACATTCT 60.340 52.381 0.00 0.00 0.00 2.40
996 1678 3.007635 CCCAACCTCCGTTACATTCTTC 58.992 50.000 0.00 0.00 0.00 2.87
1123 1805 2.303311 CTCGTCCTTCCTTTCCCTTTCT 59.697 50.000 0.00 0.00 0.00 2.52
1191 1873 0.116342 AAATCCCAAACCCCACCCTC 59.884 55.000 0.00 0.00 0.00 4.30
1192 1874 2.150014 AATCCCAAACCCCACCCTCG 62.150 60.000 0.00 0.00 0.00 4.63
1696 2378 1.363080 GCCTAGGGAATCGGACGAC 59.637 63.158 11.72 0.00 0.00 4.34
1758 2443 6.347402 GCGTGATTACTTGATGTTGTACAACT 60.347 38.462 32.58 21.04 41.67 3.16
1808 2495 1.851304 TTTGGGGGATTGCAGATGTC 58.149 50.000 0.00 0.00 0.00 3.06
1809 2496 0.394216 TTGGGGGATTGCAGATGTCG 60.394 55.000 0.00 0.00 0.00 4.35
1812 2499 1.526887 GGGATTGCAGATGTCGGGA 59.473 57.895 0.00 0.00 0.00 5.14
1814 2501 0.533755 GGATTGCAGATGTCGGGAGG 60.534 60.000 0.00 0.00 0.00 4.30
1853 2552 3.734463 TCAGGAAAGTGTTTGATGCGTA 58.266 40.909 0.00 0.00 0.00 4.42
1871 2570 3.785505 GCGTATTTCTCACAGCGAATTGG 60.786 47.826 0.00 0.00 0.00 3.16
1874 2576 3.896648 TTTCTCACAGCGAATTGGTTC 57.103 42.857 0.00 0.00 0.00 3.62
1887 2589 0.871722 TTGGTTCGATGCGTTTCTGG 59.128 50.000 0.00 0.00 0.00 3.86
1943 2658 0.101399 ACGAGCTGAGCTTGGTATCG 59.899 55.000 24.52 16.86 43.81 2.92
1945 2660 1.846541 GAGCTGAGCTTGGTATCGAC 58.153 55.000 9.00 0.00 39.88 4.20
1946 2661 1.537135 GAGCTGAGCTTGGTATCGACC 60.537 57.143 9.00 0.00 42.42 4.79
1947 2662 3.849995 GAGCTGAGCTTGGTATCGACCT 61.850 54.545 9.00 0.00 42.51 3.85
1960 2675 6.821031 GGTATCGACCTGTATAGTTGATCT 57.179 41.667 0.00 0.00 43.16 2.75
1961 2676 7.216973 GGTATCGACCTGTATAGTTGATCTT 57.783 40.000 0.00 0.00 43.16 2.40
1962 2677 7.659186 GGTATCGACCTGTATAGTTGATCTTT 58.341 38.462 0.00 0.00 43.16 2.52
1963 2678 7.808856 GGTATCGACCTGTATAGTTGATCTTTC 59.191 40.741 0.00 0.00 43.16 2.62
1964 2679 7.589958 ATCGACCTGTATAGTTGATCTTTCT 57.410 36.000 0.00 0.00 33.88 2.52
1965 2680 7.406031 TCGACCTGTATAGTTGATCTTTCTT 57.594 36.000 0.00 0.00 0.00 2.52
1966 2681 7.837863 TCGACCTGTATAGTTGATCTTTCTTT 58.162 34.615 0.00 0.00 0.00 2.52
1967 2682 7.974501 TCGACCTGTATAGTTGATCTTTCTTTC 59.025 37.037 0.00 0.00 0.00 2.62
1968 2683 7.043986 CGACCTGTATAGTTGATCTTTCTTTCG 60.044 40.741 0.00 0.00 0.00 3.46
1969 2684 7.612677 ACCTGTATAGTTGATCTTTCTTTCGT 58.387 34.615 0.00 0.00 0.00 3.85
1970 2685 8.095169 ACCTGTATAGTTGATCTTTCTTTCGTT 58.905 33.333 0.00 0.00 0.00 3.85
1971 2686 9.582431 CCTGTATAGTTGATCTTTCTTTCGTTA 57.418 33.333 0.00 0.00 0.00 3.18
1991 2706 8.931385 TCGTTATTGTTATTAACCACTACTCC 57.069 34.615 4.17 0.00 0.00 3.85
1992 2707 8.530311 TCGTTATTGTTATTAACCACTACTCCA 58.470 33.333 4.17 0.00 0.00 3.86
1993 2708 9.153721 CGTTATTGTTATTAACCACTACTCCAA 57.846 33.333 4.17 0.00 0.00 3.53
1996 2711 8.927675 ATTGTTATTAACCACTACTCCAACAA 57.072 30.769 4.17 0.00 37.64 2.83
1997 2712 8.749026 TTGTTATTAACCACTACTCCAACAAA 57.251 30.769 4.17 0.00 32.26 2.83
1998 2713 8.927675 TGTTATTAACCACTACTCCAACAAAT 57.072 30.769 4.17 0.00 0.00 2.32
1999 2714 8.788806 TGTTATTAACCACTACTCCAACAAATG 58.211 33.333 4.17 0.00 0.00 2.32
2000 2715 8.789762 GTTATTAACCACTACTCCAACAAATGT 58.210 33.333 0.00 0.00 0.00 2.71
2001 2716 7.833285 ATTAACCACTACTCCAACAAATGTT 57.167 32.000 0.00 0.00 39.12 2.71
2002 2717 5.767816 AACCACTACTCCAACAAATGTTC 57.232 39.130 0.00 0.00 35.83 3.18
2003 2718 3.813166 ACCACTACTCCAACAAATGTTCG 59.187 43.478 0.00 0.00 35.83 3.95
2004 2719 3.813166 CCACTACTCCAACAAATGTTCGT 59.187 43.478 0.00 0.00 35.83 3.85
2005 2720 4.319477 CCACTACTCCAACAAATGTTCGTG 60.319 45.833 0.00 0.00 35.83 4.35
2006 2721 4.509970 CACTACTCCAACAAATGTTCGTGA 59.490 41.667 0.00 0.00 35.83 4.35
2007 2722 3.963383 ACTCCAACAAATGTTCGTGAC 57.037 42.857 0.00 0.00 35.83 3.67
2008 2723 3.541632 ACTCCAACAAATGTTCGTGACT 58.458 40.909 0.00 0.00 35.83 3.41
2089 2804 5.126384 AGAGAAGAAATCGGAACCTAGACAG 59.874 44.000 0.00 0.00 0.00 3.51
2090 2805 4.773149 AGAAGAAATCGGAACCTAGACAGT 59.227 41.667 0.00 0.00 0.00 3.55
2091 2806 5.950549 AGAAGAAATCGGAACCTAGACAGTA 59.049 40.000 0.00 0.00 0.00 2.74
2092 2807 5.838531 AGAAATCGGAACCTAGACAGTAG 57.161 43.478 0.00 0.00 0.00 2.57
2093 2808 5.507637 AGAAATCGGAACCTAGACAGTAGA 58.492 41.667 0.00 0.00 0.00 2.59
2094 2809 5.357596 AGAAATCGGAACCTAGACAGTAGAC 59.642 44.000 0.00 0.00 0.00 2.59
2095 2810 3.708403 TCGGAACCTAGACAGTAGACA 57.292 47.619 0.00 0.00 0.00 3.41
2122 2837 1.770658 AGGCCAGATTCGATCATTGGA 59.229 47.619 5.01 0.00 0.00 3.53
2127 2842 4.336433 GCCAGATTCGATCATTGGAAAGAA 59.664 41.667 9.21 0.00 0.00 2.52
2136 2851 8.391075 TCGATCATTGGAAAGAAAAGTACTTT 57.609 30.769 15.22 15.22 39.76 2.66
2137 2852 9.496873 TCGATCATTGGAAAGAAAAGTACTTTA 57.503 29.630 20.83 3.57 37.64 1.85
2138 2853 9.760660 CGATCATTGGAAAGAAAAGTACTTTAG 57.239 33.333 20.83 2.65 37.64 1.85
2141 2856 9.063615 TCATTGGAAAGAAAAGTACTTTAGTCC 57.936 33.333 20.83 21.20 37.64 3.85
2144 2859 6.927381 TGGAAAGAAAAGTACTTTAGTCCTCG 59.073 38.462 20.83 0.00 37.64 4.63
2160 2876 0.108945 CTCGTTCACCCCCTACGAAC 60.109 60.000 0.00 0.00 42.87 3.95
2196 2912 0.972471 CCCTTGTCCCTTGGAATGCC 60.972 60.000 0.00 0.00 31.38 4.40
2197 2913 0.251742 CCTTGTCCCTTGGAATGCCA 60.252 55.000 0.00 0.00 44.17 4.92
2219 2935 4.952335 CAGGGAAAAGCCAAAGATATGACT 59.048 41.667 0.00 0.00 38.95 3.41
2223 2939 6.038714 GGGAAAAGCCAAAGATATGACTGTAG 59.961 42.308 0.00 0.00 38.95 2.74
2308 6579 5.880054 TCAATGTAAGCTTTACTCAAGGC 57.120 39.130 3.20 0.00 37.03 4.35
2312 6583 2.498644 AAGCTTTACTCAAGGCTCCC 57.501 50.000 0.00 0.00 45.57 4.30
2313 6584 0.621082 AGCTTTACTCAAGGCTCCCC 59.379 55.000 0.00 0.00 43.03 4.81
2314 6585 0.328258 GCTTTACTCAAGGCTCCCCA 59.672 55.000 0.00 0.00 34.10 4.96
2315 6586 1.271926 GCTTTACTCAAGGCTCCCCAA 60.272 52.381 0.00 0.00 34.10 4.12
2316 6587 2.817839 GCTTTACTCAAGGCTCCCCAAA 60.818 50.000 0.00 0.00 34.10 3.28
2317 6588 2.579410 TTACTCAAGGCTCCCCAAAC 57.421 50.000 0.00 0.00 0.00 2.93
2318 6589 1.742308 TACTCAAGGCTCCCCAAACT 58.258 50.000 0.00 0.00 0.00 2.66
2319 6590 0.111253 ACTCAAGGCTCCCCAAACTG 59.889 55.000 0.00 0.00 0.00 3.16
2320 6591 0.401738 CTCAAGGCTCCCCAAACTGA 59.598 55.000 0.00 0.00 0.00 3.41
2321 6592 0.110486 TCAAGGCTCCCCAAACTGAC 59.890 55.000 0.00 0.00 0.00 3.51
2322 6593 0.895559 CAAGGCTCCCCAAACTGACC 60.896 60.000 0.00 0.00 0.00 4.02
2323 6594 2.359975 GGCTCCCCAAACTGACCG 60.360 66.667 0.00 0.00 0.00 4.79
2324 6595 2.359975 GCTCCCCAAACTGACCGG 60.360 66.667 0.00 0.00 0.00 5.28
2325 6596 2.359975 CTCCCCAAACTGACCGGC 60.360 66.667 0.00 0.00 0.00 6.13
2326 6597 3.920093 CTCCCCAAACTGACCGGCC 62.920 68.421 0.00 0.00 0.00 6.13
2329 6600 4.323477 CCAAACTGACCGGCCCGA 62.323 66.667 3.71 0.00 0.00 5.14
2330 6601 2.046314 CAAACTGACCGGCCCGAT 60.046 61.111 3.71 0.00 0.00 4.18
2331 6602 2.046314 AAACTGACCGGCCCGATG 60.046 61.111 3.71 0.00 0.00 3.84
2332 6603 3.622060 AAACTGACCGGCCCGATGG 62.622 63.158 3.71 0.00 0.00 3.51
2343 6614 3.151710 CCGATGGCCCGGTCACTA 61.152 66.667 11.94 0.00 44.23 2.74
2344 6615 2.727392 CCGATGGCCCGGTCACTAA 61.727 63.158 11.94 0.00 44.23 2.24
2345 6616 1.227263 CGATGGCCCGGTCACTAAG 60.227 63.158 0.00 0.00 0.00 2.18
2346 6617 1.146263 GATGGCCCGGTCACTAAGG 59.854 63.158 0.00 0.00 0.00 2.69
2347 6618 2.942648 GATGGCCCGGTCACTAAGGC 62.943 65.000 0.00 0.00 44.99 4.35
2349 6620 3.712907 GCCCGGTCACTAAGGCCA 61.713 66.667 5.01 0.00 44.49 5.36
2350 6621 3.074281 CCCGGTCACTAAGGCCAA 58.926 61.111 5.01 0.00 44.49 4.52
2351 6622 1.376812 CCCGGTCACTAAGGCCAAC 60.377 63.158 5.01 0.00 44.49 3.77
2352 6623 1.677552 CCGGTCACTAAGGCCAACT 59.322 57.895 5.01 0.00 44.49 3.16
2353 6624 0.391263 CCGGTCACTAAGGCCAACTC 60.391 60.000 5.01 0.00 44.49 3.01
2354 6625 0.391263 CGGTCACTAAGGCCAACTCC 60.391 60.000 5.01 0.00 44.49 3.85
2355 6626 0.690762 GGTCACTAAGGCCAACTCCA 59.309 55.000 5.01 0.00 43.39 3.86
2356 6627 1.610886 GGTCACTAAGGCCAACTCCAC 60.611 57.143 5.01 0.00 43.39 4.02
2357 6628 0.690762 TCACTAAGGCCAACTCCACC 59.309 55.000 5.01 0.00 0.00 4.61
2358 6629 0.673644 CACTAAGGCCAACTCCACCG 60.674 60.000 5.01 0.00 0.00 4.94
2359 6630 1.745489 CTAAGGCCAACTCCACCGC 60.745 63.158 5.01 0.00 0.00 5.68
2360 6631 3.599285 TAAGGCCAACTCCACCGCG 62.599 63.158 5.01 0.00 0.00 6.46
2364 6635 4.025401 CCAACTCCACCGCGCAAC 62.025 66.667 8.75 0.00 0.00 4.17
2365 6636 4.025401 CAACTCCACCGCGCAACC 62.025 66.667 8.75 0.00 0.00 3.77
2375 6646 3.134127 GCGCAACCCCATCCTGTC 61.134 66.667 0.30 0.00 0.00 3.51
2376 6647 2.438434 CGCAACCCCATCCTGTCC 60.438 66.667 0.00 0.00 0.00 4.02
2377 6648 2.438434 GCAACCCCATCCTGTCCG 60.438 66.667 0.00 0.00 0.00 4.79
2378 6649 2.272146 CAACCCCATCCTGTCCGG 59.728 66.667 0.00 0.00 0.00 5.14
2379 6650 2.204090 AACCCCATCCTGTCCGGT 60.204 61.111 0.00 0.00 0.00 5.28
2380 6651 2.298661 AACCCCATCCTGTCCGGTC 61.299 63.158 0.00 0.00 0.00 4.79
2381 6652 2.365635 CCCCATCCTGTCCGGTCT 60.366 66.667 0.00 0.00 0.00 3.85
2382 6653 2.435693 CCCCATCCTGTCCGGTCTC 61.436 68.421 0.00 0.00 0.00 3.36
2383 6654 1.685765 CCCATCCTGTCCGGTCTCA 60.686 63.158 0.00 0.00 0.00 3.27
2384 6655 1.050988 CCCATCCTGTCCGGTCTCAT 61.051 60.000 0.00 0.00 0.00 2.90
2385 6656 0.390860 CCATCCTGTCCGGTCTCATC 59.609 60.000 0.00 0.00 0.00 2.92
2386 6657 0.390860 CATCCTGTCCGGTCTCATCC 59.609 60.000 0.00 0.00 0.00 3.51
2404 6675 7.974675 TCTCATCCGTTTGAGATAAAATGAAC 58.025 34.615 9.73 0.00 45.49 3.18
2405 6676 7.606073 TCTCATCCGTTTGAGATAAAATGAACA 59.394 33.333 9.73 0.00 45.49 3.18
2406 6677 8.105097 TCATCCGTTTGAGATAAAATGAACAA 57.895 30.769 0.00 0.00 0.00 2.83
2407 6678 8.572185 TCATCCGTTTGAGATAAAATGAACAAA 58.428 29.630 0.00 0.00 0.00 2.83
2408 6679 8.638565 CATCCGTTTGAGATAAAATGAACAAAC 58.361 33.333 0.00 0.00 41.60 2.93
2409 6680 7.142680 TCCGTTTGAGATAAAATGAACAAACC 58.857 34.615 0.00 0.00 41.83 3.27
2410 6681 6.087555 CCGTTTGAGATAAAATGAACAAACCG 59.912 38.462 0.00 0.00 41.83 4.44
2411 6682 6.087555 CGTTTGAGATAAAATGAACAAACCGG 59.912 38.462 0.00 0.00 41.83 5.28
2412 6683 6.885952 TTGAGATAAAATGAACAAACCGGA 57.114 33.333 9.46 0.00 0.00 5.14
2413 6684 6.249035 TGAGATAAAATGAACAAACCGGAC 57.751 37.500 9.46 0.00 0.00 4.79
2414 6685 5.106869 TGAGATAAAATGAACAAACCGGACG 60.107 40.000 9.46 0.00 0.00 4.79
2415 6686 2.785713 AAAATGAACAAACCGGACGG 57.214 45.000 9.46 9.56 42.03 4.79
2416 6687 0.312729 AAATGAACAAACCGGACGGC 59.687 50.000 9.46 0.00 39.32 5.68
2417 6688 1.520600 AATGAACAAACCGGACGGCC 61.521 55.000 9.46 0.00 39.32 6.13
2418 6689 3.359523 GAACAAACCGGACGGCCC 61.360 66.667 9.46 0.00 39.32 5.80
2419 6690 4.192453 AACAAACCGGACGGCCCA 62.192 61.111 9.46 0.00 39.32 5.36
2420 6691 4.636435 ACAAACCGGACGGCCCAG 62.636 66.667 9.46 0.00 39.32 4.45
2442 6713 4.547367 CGAAGGCCCGGACCCATC 62.547 72.222 1.77 4.71 0.00 3.51
2443 6714 3.407967 GAAGGCCCGGACCCATCA 61.408 66.667 1.77 0.00 0.00 3.07
2444 6715 2.696125 AAGGCCCGGACCCATCAT 60.696 61.111 1.77 0.00 0.00 2.45
2445 6716 2.965716 GAAGGCCCGGACCCATCATG 62.966 65.000 1.77 0.00 0.00 3.07
2446 6717 3.809013 GGCCCGGACCCATCATGT 61.809 66.667 0.73 0.00 0.00 3.21
2447 6718 2.203209 GCCCGGACCCATCATGTC 60.203 66.667 0.73 0.00 0.00 3.06
2452 6723 3.569873 GGACCCATCATGTCCGTTT 57.430 52.632 0.00 0.00 42.63 3.60
2453 6724 1.834188 GGACCCATCATGTCCGTTTT 58.166 50.000 0.00 0.00 42.63 2.43
2454 6725 2.993937 GGACCCATCATGTCCGTTTTA 58.006 47.619 0.00 0.00 42.63 1.52
2455 6726 3.551846 GGACCCATCATGTCCGTTTTAT 58.448 45.455 0.00 0.00 42.63 1.40
2456 6727 3.315191 GGACCCATCATGTCCGTTTTATG 59.685 47.826 0.00 0.00 42.63 1.90
2457 6728 3.945285 GACCCATCATGTCCGTTTTATGT 59.055 43.478 0.00 0.00 0.00 2.29
2458 6729 3.945285 ACCCATCATGTCCGTTTTATGTC 59.055 43.478 0.00 0.00 0.00 3.06
2459 6730 3.315191 CCCATCATGTCCGTTTTATGTCC 59.685 47.826 0.00 0.00 0.00 4.02
2460 6731 3.002246 CCATCATGTCCGTTTTATGTCCG 59.998 47.826 0.00 0.00 0.00 4.79
2461 6732 2.623535 TCATGTCCGTTTTATGTCCGG 58.376 47.619 0.00 0.00 43.03 5.14
2462 6733 1.668751 CATGTCCGTTTTATGTCCGGG 59.331 52.381 0.00 0.00 41.98 5.73
2463 6734 0.674269 TGTCCGTTTTATGTCCGGGC 60.674 55.000 0.00 0.00 46.18 6.13
2464 6735 1.078285 TCCGTTTTATGTCCGGGCC 60.078 57.895 2.12 0.00 41.98 5.80
2465 6736 2.466140 CCGTTTTATGTCCGGGCCG 61.466 63.158 21.46 21.46 38.09 6.13
2466 6737 1.448189 CGTTTTATGTCCGGGCCGA 60.448 57.895 30.79 8.18 0.00 5.54
2467 6738 1.698714 CGTTTTATGTCCGGGCCGAC 61.699 60.000 30.79 22.88 0.00 4.79
2468 6739 1.078285 TTTTATGTCCGGGCCGACC 60.078 57.895 30.79 17.72 31.35 4.79
2478 6749 3.202706 GGCCGACCCATTTCGAGC 61.203 66.667 0.00 0.00 41.78 5.03
2479 6750 3.564027 GCCGACCCATTTCGAGCG 61.564 66.667 0.00 0.00 41.78 5.03
2480 6751 2.125673 CCGACCCATTTCGAGCGT 60.126 61.111 0.00 0.00 41.78 5.07
2481 6752 1.140161 CCGACCCATTTCGAGCGTA 59.860 57.895 0.00 0.00 41.78 4.42
2482 6753 0.458889 CCGACCCATTTCGAGCGTAA 60.459 55.000 0.00 0.00 41.78 3.18
2483 6754 1.352114 CGACCCATTTCGAGCGTAAA 58.648 50.000 0.00 0.00 41.78 2.01
2484 6755 1.060122 CGACCCATTTCGAGCGTAAAC 59.940 52.381 0.00 0.00 41.78 2.01
2485 6756 2.344025 GACCCATTTCGAGCGTAAACT 58.656 47.619 0.00 0.00 0.00 2.66
2486 6757 2.740447 GACCCATTTCGAGCGTAAACTT 59.260 45.455 0.00 0.00 0.00 2.66
2487 6758 2.482721 ACCCATTTCGAGCGTAAACTTG 59.517 45.455 0.00 0.00 0.00 3.16
2488 6759 2.505866 CCATTTCGAGCGTAAACTTGC 58.494 47.619 0.00 0.00 0.00 4.01
2489 6760 2.158143 CATTTCGAGCGTAAACTTGCG 58.842 47.619 0.00 0.00 39.33 4.85
2495 6766 3.650369 CGTAAACTTGCGCTGGGT 58.350 55.556 9.73 1.34 0.00 4.51
2496 6767 1.946267 CGTAAACTTGCGCTGGGTT 59.054 52.632 9.73 8.87 0.00 4.11
2497 6768 0.309612 CGTAAACTTGCGCTGGGTTT 59.690 50.000 21.72 21.72 37.08 3.27
2498 6769 1.662026 CGTAAACTTGCGCTGGGTTTC 60.662 52.381 21.68 11.45 35.29 2.78
2499 6770 0.589223 TAAACTTGCGCTGGGTTTCG 59.411 50.000 21.68 1.67 35.29 3.46
2500 6771 2.070654 AAACTTGCGCTGGGTTTCGG 62.071 55.000 9.73 0.00 0.00 4.30
2501 6772 2.978010 CTTGCGCTGGGTTTCGGT 60.978 61.111 9.73 0.00 0.00 4.69
2502 6773 2.966309 CTTGCGCTGGGTTTCGGTC 61.966 63.158 9.73 0.00 0.00 4.79
2505 6776 3.411351 CGCTGGGTTTCGGTCGTG 61.411 66.667 0.00 0.00 0.00 4.35
2506 6777 3.047877 GCTGGGTTTCGGTCGTGG 61.048 66.667 0.00 0.00 0.00 4.94
2507 6778 3.047877 CTGGGTTTCGGTCGTGGC 61.048 66.667 0.00 0.00 0.00 5.01
2508 6779 4.973055 TGGGTTTCGGTCGTGGCG 62.973 66.667 0.00 0.00 0.00 5.69
2510 6781 4.668118 GGTTTCGGTCGTGGCGGA 62.668 66.667 0.00 0.00 0.00 5.54
2511 6782 3.408851 GTTTCGGTCGTGGCGGAC 61.409 66.667 0.30 0.30 36.18 4.79
2554 6825 4.814294 CAGGCGGCCACGTACCTC 62.814 72.222 23.09 0.00 43.45 3.85
2558 6829 4.446413 CGGCCACGTACCTCCCAC 62.446 72.222 2.24 0.00 34.81 4.61
2559 6830 4.091939 GGCCACGTACCTCCCACC 62.092 72.222 0.00 0.00 0.00 4.61
2560 6831 4.446413 GCCACGTACCTCCCACCG 62.446 72.222 0.00 0.00 0.00 4.94
2561 6832 4.446413 CCACGTACCTCCCACCGC 62.446 72.222 0.00 0.00 0.00 5.68
2562 6833 4.446413 CACGTACCTCCCACCGCC 62.446 72.222 0.00 0.00 0.00 6.13
2563 6834 4.691359 ACGTACCTCCCACCGCCT 62.691 66.667 0.00 0.00 0.00 5.52
2564 6835 4.143333 CGTACCTCCCACCGCCTG 62.143 72.222 0.00 0.00 0.00 4.85
2565 6836 2.682494 GTACCTCCCACCGCCTGA 60.682 66.667 0.00 0.00 0.00 3.86
2566 6837 2.682494 TACCTCCCACCGCCTGAC 60.682 66.667 0.00 0.00 0.00 3.51
2567 6838 3.533079 TACCTCCCACCGCCTGACA 62.533 63.158 0.00 0.00 0.00 3.58
2568 6839 2.815684 TACCTCCCACCGCCTGACAT 62.816 60.000 0.00 0.00 0.00 3.06
2569 6840 2.063979 CCTCCCACCGCCTGACATA 61.064 63.158 0.00 0.00 0.00 2.29
2570 6841 1.622607 CCTCCCACCGCCTGACATAA 61.623 60.000 0.00 0.00 0.00 1.90
2571 6842 0.251916 CTCCCACCGCCTGACATAAA 59.748 55.000 0.00 0.00 0.00 1.40
2572 6843 0.916086 TCCCACCGCCTGACATAAAT 59.084 50.000 0.00 0.00 0.00 1.40
2573 6844 1.024271 CCCACCGCCTGACATAAATG 58.976 55.000 0.00 0.00 0.00 2.32
2574 6845 0.381801 CCACCGCCTGACATAAATGC 59.618 55.000 0.00 0.00 0.00 3.56
2575 6846 0.027979 CACCGCCTGACATAAATGCG 59.972 55.000 0.00 0.00 44.47 4.73
2576 6847 0.392461 ACCGCCTGACATAAATGCGT 60.392 50.000 0.00 0.00 43.44 5.24
2577 6848 1.134640 ACCGCCTGACATAAATGCGTA 60.135 47.619 0.00 0.00 43.44 4.42
2578 6849 1.260561 CCGCCTGACATAAATGCGTAC 59.739 52.381 0.00 0.00 43.44 3.67
2579 6850 1.071502 CGCCTGACATAAATGCGTACG 60.072 52.381 11.84 11.84 40.33 3.67
2580 6851 1.260561 GCCTGACATAAATGCGTACGG 59.739 52.381 18.39 0.23 0.00 4.02
2581 6852 1.864711 CCTGACATAAATGCGTACGGG 59.135 52.381 18.39 0.65 0.00 5.28
2582 6853 2.546778 CTGACATAAATGCGTACGGGT 58.453 47.619 18.39 0.00 0.00 5.28
2583 6854 2.272678 TGACATAAATGCGTACGGGTG 58.727 47.619 18.39 0.00 0.00 4.61
2584 6855 1.595794 GACATAAATGCGTACGGGTGG 59.404 52.381 18.39 0.00 0.00 4.61
2585 6856 1.065998 ACATAAATGCGTACGGGTGGT 60.066 47.619 18.39 0.00 0.00 4.16
2586 6857 1.595794 CATAAATGCGTACGGGTGGTC 59.404 52.381 18.39 0.00 0.00 4.02
2587 6858 0.458197 TAAATGCGTACGGGTGGTCG 60.458 55.000 18.39 0.00 0.00 4.79
2588 6859 2.157305 AAATGCGTACGGGTGGTCGA 62.157 55.000 18.39 0.00 0.00 4.20
2589 6860 2.824071 AATGCGTACGGGTGGTCGAC 62.824 60.000 18.39 7.13 0.00 4.20
2590 6861 4.783734 GCGTACGGGTGGTCGACC 62.784 72.222 28.17 28.17 45.28 4.79
2599 6870 2.920912 TGGTCGACCCCACCTGTC 60.921 66.667 31.19 3.87 34.66 3.51
2600 6871 2.920912 GGTCGACCCCACCTGTCA 60.921 66.667 24.75 0.00 32.91 3.58
2601 6872 2.291043 GGTCGACCCCACCTGTCAT 61.291 63.158 24.75 0.00 32.91 3.06
2602 6873 1.218316 GTCGACCCCACCTGTCATC 59.782 63.158 3.51 0.00 32.91 2.92
2603 6874 1.987855 TCGACCCCACCTGTCATCC 60.988 63.158 0.00 0.00 32.91 3.51
2604 6875 2.584608 GACCCCACCTGTCATCCG 59.415 66.667 0.00 0.00 32.91 4.18
2605 6876 3.682292 GACCCCACCTGTCATCCGC 62.682 68.421 0.00 0.00 32.91 5.54
2606 6877 4.489771 CCCCACCTGTCATCCGCC 62.490 72.222 0.00 0.00 0.00 6.13
2607 6878 4.489771 CCCACCTGTCATCCGCCC 62.490 72.222 0.00 0.00 0.00 6.13
2608 6879 3.716195 CCACCTGTCATCCGCCCA 61.716 66.667 0.00 0.00 0.00 5.36
2609 6880 2.124983 CACCTGTCATCCGCCCAG 60.125 66.667 0.00 0.00 0.00 4.45
2610 6881 4.101448 ACCTGTCATCCGCCCAGC 62.101 66.667 0.00 0.00 0.00 4.85
2627 6898 2.506438 CGAACGGTCGCTTCCCTC 60.506 66.667 11.19 0.00 41.08 4.30
2628 6899 2.971452 GAACGGTCGCTTCCCTCT 59.029 61.111 0.00 0.00 0.00 3.69
2629 6900 1.292541 GAACGGTCGCTTCCCTCTT 59.707 57.895 0.00 0.00 0.00 2.85
2630 6901 0.529378 GAACGGTCGCTTCCCTCTTA 59.471 55.000 0.00 0.00 0.00 2.10
2631 6902 0.971386 AACGGTCGCTTCCCTCTTAA 59.029 50.000 0.00 0.00 0.00 1.85
2632 6903 0.971386 ACGGTCGCTTCCCTCTTAAA 59.029 50.000 0.00 0.00 0.00 1.52
2633 6904 1.553704 ACGGTCGCTTCCCTCTTAAAT 59.446 47.619 0.00 0.00 0.00 1.40
2634 6905 1.933853 CGGTCGCTTCCCTCTTAAATG 59.066 52.381 0.00 0.00 0.00 2.32
2635 6906 2.289565 GGTCGCTTCCCTCTTAAATGG 58.710 52.381 0.00 0.00 0.00 3.16
2636 6907 2.289565 GTCGCTTCCCTCTTAAATGGG 58.710 52.381 6.18 6.18 44.66 4.00
2643 6914 3.629142 CCCTCTTAAATGGGAAGTCGT 57.371 47.619 6.60 0.00 46.15 4.34
2644 6915 3.270877 CCCTCTTAAATGGGAAGTCGTG 58.729 50.000 6.60 0.00 46.15 4.35
2645 6916 3.270877 CCTCTTAAATGGGAAGTCGTGG 58.729 50.000 0.00 0.00 0.00 4.94
2646 6917 3.055385 CCTCTTAAATGGGAAGTCGTGGA 60.055 47.826 0.00 0.00 0.00 4.02
2647 6918 3.933332 CTCTTAAATGGGAAGTCGTGGAC 59.067 47.826 0.00 0.00 0.00 4.02
2648 6919 2.773993 TAAATGGGAAGTCGTGGACC 57.226 50.000 0.00 0.00 32.18 4.46
2649 6920 0.321298 AAATGGGAAGTCGTGGACCG 60.321 55.000 0.00 0.00 32.18 4.79
2650 6921 2.180159 AATGGGAAGTCGTGGACCGG 62.180 60.000 0.00 0.00 37.11 5.28
2651 6922 4.754667 GGGAAGTCGTGGACCGGC 62.755 72.222 0.00 0.00 42.97 6.13
2652 6923 4.754667 GGAAGTCGTGGACCGGCC 62.755 72.222 0.00 4.32 43.96 6.13
2666 6937 4.736896 GGCCGTCGTCCACACTCC 62.737 72.222 0.00 0.00 0.00 3.85
2667 6938 4.736896 GCCGTCGTCCACACTCCC 62.737 72.222 0.00 0.00 0.00 4.30
2668 6939 4.065281 CCGTCGTCCACACTCCCC 62.065 72.222 0.00 0.00 0.00 4.81
2669 6940 3.299977 CGTCGTCCACACTCCCCA 61.300 66.667 0.00 0.00 0.00 4.96
2670 6941 2.657237 GTCGTCCACACTCCCCAG 59.343 66.667 0.00 0.00 0.00 4.45
2671 6942 2.200370 TCGTCCACACTCCCCAGT 59.800 61.111 0.00 0.00 0.00 4.00
2672 6943 1.906824 TCGTCCACACTCCCCAGTC 60.907 63.158 0.00 0.00 0.00 3.51
2673 6944 2.657237 GTCCACACTCCCCAGTCG 59.343 66.667 0.00 0.00 0.00 4.18
2674 6945 2.603473 TCCACACTCCCCAGTCGG 60.603 66.667 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.957466 GCTTGACTTTTTGGGTATATACTCTTT 58.043 33.333 13.87 0.00 0.00 2.52
1 2 8.329502 AGCTTGACTTTTTGGGTATATACTCTT 58.670 33.333 13.87 0.00 0.00 2.85
2 3 7.862675 AGCTTGACTTTTTGGGTATATACTCT 58.137 34.615 13.87 0.00 0.00 3.24
3 4 9.043079 GTAGCTTGACTTTTTGGGTATATACTC 57.957 37.037 12.54 9.34 0.00 2.59
4 5 7.991460 GGTAGCTTGACTTTTTGGGTATATACT 59.009 37.037 12.54 0.00 0.00 2.12
5 6 7.771826 TGGTAGCTTGACTTTTTGGGTATATAC 59.228 37.037 4.14 4.14 0.00 1.47
6 7 7.863722 TGGTAGCTTGACTTTTTGGGTATATA 58.136 34.615 0.00 0.00 0.00 0.86
7 8 6.727394 TGGTAGCTTGACTTTTTGGGTATAT 58.273 36.000 0.00 0.00 0.00 0.86
8 9 6.129414 TGGTAGCTTGACTTTTTGGGTATA 57.871 37.500 0.00 0.00 0.00 1.47
9 10 4.993028 TGGTAGCTTGACTTTTTGGGTAT 58.007 39.130 0.00 0.00 0.00 2.73
10 11 4.394729 CTGGTAGCTTGACTTTTTGGGTA 58.605 43.478 0.00 0.00 0.00 3.69
11 12 3.222603 CTGGTAGCTTGACTTTTTGGGT 58.777 45.455 0.00 0.00 0.00 4.51
12 13 2.558359 CCTGGTAGCTTGACTTTTTGGG 59.442 50.000 0.00 0.00 0.00 4.12
13 14 2.029918 GCCTGGTAGCTTGACTTTTTGG 60.030 50.000 0.00 0.00 0.00 3.28
14 15 2.622942 TGCCTGGTAGCTTGACTTTTTG 59.377 45.455 0.00 0.00 0.00 2.44
15 16 2.944129 TGCCTGGTAGCTTGACTTTTT 58.056 42.857 0.00 0.00 0.00 1.94
16 17 2.656947 TGCCTGGTAGCTTGACTTTT 57.343 45.000 0.00 0.00 0.00 2.27
17 18 2.656947 TTGCCTGGTAGCTTGACTTT 57.343 45.000 0.00 0.00 0.00 2.66
18 19 2.887151 ATTGCCTGGTAGCTTGACTT 57.113 45.000 0.00 0.00 0.00 3.01
19 20 2.887151 AATTGCCTGGTAGCTTGACT 57.113 45.000 0.00 0.00 0.00 3.41
20 21 5.582689 ATTTAATTGCCTGGTAGCTTGAC 57.417 39.130 0.00 0.00 0.00 3.18
21 22 5.299279 GCTATTTAATTGCCTGGTAGCTTGA 59.701 40.000 0.00 0.00 32.52 3.02
22 23 5.300286 AGCTATTTAATTGCCTGGTAGCTTG 59.700 40.000 7.67 0.00 40.10 4.01
23 24 5.449553 AGCTATTTAATTGCCTGGTAGCTT 58.550 37.500 7.67 0.00 40.10 3.74
24 25 5.053978 AGCTATTTAATTGCCTGGTAGCT 57.946 39.130 7.67 5.63 38.73 3.32
25 26 5.299279 TCAAGCTATTTAATTGCCTGGTAGC 59.701 40.000 7.67 0.00 34.75 3.58
26 27 6.942532 TCAAGCTATTTAATTGCCTGGTAG 57.057 37.500 7.67 0.00 0.00 3.18
27 28 6.490040 GGATCAAGCTATTTAATTGCCTGGTA 59.510 38.462 7.67 0.00 0.00 3.25
28 29 5.302823 GGATCAAGCTATTTAATTGCCTGGT 59.697 40.000 7.67 1.88 0.00 4.00
29 30 5.537674 AGGATCAAGCTATTTAATTGCCTGG 59.462 40.000 7.67 0.00 0.00 4.45
30 31 6.645790 AGGATCAAGCTATTTAATTGCCTG 57.354 37.500 7.67 5.81 0.00 4.85
31 32 8.766994 TTTAGGATCAAGCTATTTAATTGCCT 57.233 30.769 7.67 0.00 0.00 4.75
32 33 9.816354 TTTTTAGGATCAAGCTATTTAATTGCC 57.184 29.630 7.67 0.00 0.00 4.52
56 57 6.259167 GGGTTCGAGCTTTTTAATTGGTTTTT 59.741 34.615 0.00 0.00 0.00 1.94
57 58 5.756347 GGGTTCGAGCTTTTTAATTGGTTTT 59.244 36.000 0.00 0.00 0.00 2.43
58 59 5.294356 GGGTTCGAGCTTTTTAATTGGTTT 58.706 37.500 0.00 0.00 0.00 3.27
59 60 4.557895 CGGGTTCGAGCTTTTTAATTGGTT 60.558 41.667 0.00 0.00 39.00 3.67
60 61 3.057806 CGGGTTCGAGCTTTTTAATTGGT 60.058 43.478 0.00 0.00 39.00 3.67
61 62 3.189702 TCGGGTTCGAGCTTTTTAATTGG 59.810 43.478 0.00 0.00 40.88 3.16
62 63 4.156182 GTCGGGTTCGAGCTTTTTAATTG 58.844 43.478 0.00 0.00 46.91 2.32
63 64 3.816523 TGTCGGGTTCGAGCTTTTTAATT 59.183 39.130 0.00 0.00 46.91 1.40
64 65 3.187842 GTGTCGGGTTCGAGCTTTTTAAT 59.812 43.478 0.00 0.00 46.91 1.40
65 66 2.545106 GTGTCGGGTTCGAGCTTTTTAA 59.455 45.455 0.00 0.00 46.91 1.52
66 67 2.137523 GTGTCGGGTTCGAGCTTTTTA 58.862 47.619 0.00 0.00 46.91 1.52
67 68 0.942252 GTGTCGGGTTCGAGCTTTTT 59.058 50.000 0.00 0.00 46.91 1.94
68 69 0.179067 TGTGTCGGGTTCGAGCTTTT 60.179 50.000 0.00 0.00 46.91 2.27
69 70 0.600255 CTGTGTCGGGTTCGAGCTTT 60.600 55.000 0.00 0.00 46.91 3.51
70 71 1.006102 CTGTGTCGGGTTCGAGCTT 60.006 57.895 0.00 0.00 46.91 3.74
71 72 0.892358 TACTGTGTCGGGTTCGAGCT 60.892 55.000 0.00 0.00 46.91 4.09
72 73 0.172803 ATACTGTGTCGGGTTCGAGC 59.827 55.000 0.00 0.00 46.91 5.03
73 74 2.649331 AATACTGTGTCGGGTTCGAG 57.351 50.000 0.00 0.00 46.91 4.04
74 75 2.296752 TGAAATACTGTGTCGGGTTCGA 59.703 45.455 0.00 0.00 43.86 3.71
75 76 2.679450 TGAAATACTGTGTCGGGTTCG 58.321 47.619 0.00 0.00 37.82 3.95
76 77 4.312443 TCTTGAAATACTGTGTCGGGTTC 58.688 43.478 0.00 0.00 0.00 3.62
77 78 4.345859 TCTTGAAATACTGTGTCGGGTT 57.654 40.909 0.00 0.00 0.00 4.11
78 79 4.345859 TTCTTGAAATACTGTGTCGGGT 57.654 40.909 0.00 0.00 0.00 5.28
79 80 4.094887 CCATTCTTGAAATACTGTGTCGGG 59.905 45.833 0.00 0.00 0.00 5.14
80 81 4.094887 CCCATTCTTGAAATACTGTGTCGG 59.905 45.833 0.00 0.00 0.00 4.79
81 82 4.935205 TCCCATTCTTGAAATACTGTGTCG 59.065 41.667 0.00 0.00 0.00 4.35
82 83 6.817765 TTCCCATTCTTGAAATACTGTGTC 57.182 37.500 0.00 0.00 0.00 3.67
83 84 6.549364 TGTTTCCCATTCTTGAAATACTGTGT 59.451 34.615 0.00 0.00 33.44 3.72
84 85 6.980593 TGTTTCCCATTCTTGAAATACTGTG 58.019 36.000 0.00 0.00 33.44 3.66
85 86 7.595819 TTGTTTCCCATTCTTGAAATACTGT 57.404 32.000 0.00 0.00 33.44 3.55
86 87 7.546667 CCATTGTTTCCCATTCTTGAAATACTG 59.453 37.037 0.00 0.00 33.44 2.74
87 88 7.454380 TCCATTGTTTCCCATTCTTGAAATACT 59.546 33.333 0.00 0.00 33.44 2.12
88 89 7.545615 GTCCATTGTTTCCCATTCTTGAAATAC 59.454 37.037 0.00 0.00 33.44 1.89
89 90 7.576666 CGTCCATTGTTTCCCATTCTTGAAATA 60.577 37.037 0.00 0.00 33.44 1.40
90 91 6.466812 GTCCATTGTTTCCCATTCTTGAAAT 58.533 36.000 0.00 0.00 33.44 2.17
91 92 5.508825 CGTCCATTGTTTCCCATTCTTGAAA 60.509 40.000 0.00 0.00 0.00 2.69
92 93 4.022416 CGTCCATTGTTTCCCATTCTTGAA 60.022 41.667 0.00 0.00 0.00 2.69
93 94 3.505680 CGTCCATTGTTTCCCATTCTTGA 59.494 43.478 0.00 0.00 0.00 3.02
94 95 3.255642 ACGTCCATTGTTTCCCATTCTTG 59.744 43.478 0.00 0.00 0.00 3.02
95 96 3.255642 CACGTCCATTGTTTCCCATTCTT 59.744 43.478 0.00 0.00 0.00 2.52
96 97 2.819608 CACGTCCATTGTTTCCCATTCT 59.180 45.455 0.00 0.00 0.00 2.40
97 98 2.094752 CCACGTCCATTGTTTCCCATTC 60.095 50.000 0.00 0.00 0.00 2.67
98 99 1.892474 CCACGTCCATTGTTTCCCATT 59.108 47.619 0.00 0.00 0.00 3.16
99 100 1.203001 ACCACGTCCATTGTTTCCCAT 60.203 47.619 0.00 0.00 0.00 4.00
100 101 0.183971 ACCACGTCCATTGTTTCCCA 59.816 50.000 0.00 0.00 0.00 4.37
101 102 2.081462 CTACCACGTCCATTGTTTCCC 58.919 52.381 0.00 0.00 0.00 3.97
102 103 2.081462 CCTACCACGTCCATTGTTTCC 58.919 52.381 0.00 0.00 0.00 3.13
103 104 2.081462 CCCTACCACGTCCATTGTTTC 58.919 52.381 0.00 0.00 0.00 2.78
125 126 7.309770 AGAAGTACCAAGTCTTGAGATTTCT 57.690 36.000 14.42 14.03 0.00 2.52
142 143 2.025898 CTCCCTCCTCGGAAGAAGTAC 58.974 57.143 0.00 0.00 41.32 2.73
251 260 9.066892 TGAAAACTTTTACTGCTATGTTCAGAT 57.933 29.630 0.00 0.00 35.61 2.90
276 287 7.816945 AGAATCAATGCGGAATTAAAGTTTG 57.183 32.000 0.00 0.00 0.00 2.93
277 288 8.087750 TCAAGAATCAATGCGGAATTAAAGTTT 58.912 29.630 0.00 0.00 0.00 2.66
280 291 7.253422 ACTCAAGAATCAATGCGGAATTAAAG 58.747 34.615 0.00 0.00 0.00 1.85
285 330 5.674525 TCTACTCAAGAATCAATGCGGAAT 58.325 37.500 0.00 0.00 0.00 3.01
298 343 7.444183 CCTTATGTTGGTGTTTTCTACTCAAGA 59.556 37.037 0.00 0.00 0.00 3.02
299 344 7.228706 ACCTTATGTTGGTGTTTTCTACTCAAG 59.771 37.037 0.00 0.00 36.30 3.02
313 358 3.329520 TGCTACAAGGACCTTATGTTGGT 59.670 43.478 6.38 2.08 41.07 3.67
314 359 3.950397 TGCTACAAGGACCTTATGTTGG 58.050 45.455 6.38 0.00 0.00 3.77
315 360 5.185454 TCATGCTACAAGGACCTTATGTTG 58.815 41.667 6.38 4.96 0.00 3.33
316 361 5.435686 TCATGCTACAAGGACCTTATGTT 57.564 39.130 6.38 0.00 0.00 2.71
317 362 5.435686 TTCATGCTACAAGGACCTTATGT 57.564 39.130 6.38 5.17 0.00 2.29
318 363 6.543465 TCATTTCATGCTACAAGGACCTTATG 59.457 38.462 6.38 7.00 0.00 1.90
337 552 3.119708 GGTGCATGTTGGACTCTCATTTC 60.120 47.826 0.00 0.00 38.83 2.17
342 557 1.002430 TGAGGTGCATGTTGGACTCTC 59.998 52.381 0.00 5.29 38.83 3.20
348 563 1.830279 ATGAGTGAGGTGCATGTTGG 58.170 50.000 0.00 0.00 0.00 3.77
349 564 2.815503 TGAATGAGTGAGGTGCATGTTG 59.184 45.455 0.00 0.00 0.00 3.33
350 565 3.144657 TGAATGAGTGAGGTGCATGTT 57.855 42.857 0.00 0.00 0.00 2.71
352 567 3.733988 GCAATGAATGAGTGAGGTGCATG 60.734 47.826 0.00 0.00 0.00 4.06
353 568 2.426024 GCAATGAATGAGTGAGGTGCAT 59.574 45.455 0.00 0.00 0.00 3.96
354 569 1.814394 GCAATGAATGAGTGAGGTGCA 59.186 47.619 0.00 0.00 0.00 4.57
355 570 1.202110 CGCAATGAATGAGTGAGGTGC 60.202 52.381 0.00 0.00 0.00 5.01
356 571 2.079158 ACGCAATGAATGAGTGAGGTG 58.921 47.619 0.00 0.00 40.83 4.00
357 572 2.479566 ACGCAATGAATGAGTGAGGT 57.520 45.000 0.00 0.00 40.83 3.85
371 599 0.519077 TATTCACGCAATGCACGCAA 59.481 45.000 5.91 0.00 0.00 4.85
373 601 1.578915 CTTTATTCACGCAATGCACGC 59.421 47.619 5.91 0.00 0.00 5.34
392 620 1.758280 TGTCACGTACACCTTTGGACT 59.242 47.619 0.00 0.00 33.84 3.85
395 623 5.676532 TTAATTGTCACGTACACCTTTGG 57.323 39.130 0.00 0.00 38.00 3.28
396 624 8.025243 AGTATTAATTGTCACGTACACCTTTG 57.975 34.615 0.00 0.00 38.00 2.77
413 948 9.956720 GCATTTACAATGAGCTTGAGTATTAAT 57.043 29.630 0.49 0.00 38.29 1.40
414 949 8.955388 TGCATTTACAATGAGCTTGAGTATTAA 58.045 29.630 0.49 0.00 38.29 1.40
415 950 8.504812 TGCATTTACAATGAGCTTGAGTATTA 57.495 30.769 0.49 0.00 38.29 0.98
435 970 7.739498 ATCTTTGAAAGCAGAAAATTGCATT 57.261 28.000 0.00 0.00 46.47 3.56
437 972 7.496591 AGAAATCTTTGAAAGCAGAAAATTGCA 59.503 29.630 0.00 0.00 46.47 4.08
438 973 7.858583 AGAAATCTTTGAAAGCAGAAAATTGC 58.141 30.769 0.00 0.00 44.41 3.56
441 976 9.603921 TGAAAGAAATCTTTGAAAGCAGAAAAT 57.396 25.926 12.85 0.00 45.37 1.82
447 982 6.096705 TCCAGTGAAAGAAATCTTTGAAAGCA 59.903 34.615 12.85 2.25 45.37 3.91
469 1119 1.173043 GACGGTGAAATTGGCATCCA 58.827 50.000 0.00 0.00 0.00 3.41
478 1128 5.413309 AGAGAGAAATGAGACGGTGAAAT 57.587 39.130 0.00 0.00 0.00 2.17
515 1166 0.246360 TCGGTACAGCTGTCCACATG 59.754 55.000 25.56 13.06 0.00 3.21
520 1171 0.458716 GCTCTTCGGTACAGCTGTCC 60.459 60.000 25.56 21.79 0.00 4.02
521 1172 0.243907 TGCTCTTCGGTACAGCTGTC 59.756 55.000 25.56 14.78 34.03 3.51
523 1174 1.284657 CATGCTCTTCGGTACAGCTG 58.715 55.000 13.48 13.48 34.03 4.24
527 1178 2.805671 CACAAACATGCTCTTCGGTACA 59.194 45.455 0.00 0.00 0.00 2.90
528 1179 3.064207 TCACAAACATGCTCTTCGGTAC 58.936 45.455 0.00 0.00 0.00 3.34
543 1194 7.274603 TCATCAATTGACACAATCTCACAAA 57.725 32.000 11.07 0.00 0.00 2.83
571 1223 0.260816 TATCGCCCCTCACCTAGTGT 59.739 55.000 0.00 0.00 34.79 3.55
583 1235 3.134458 CTCATCAGAAACCTTATCGCCC 58.866 50.000 0.00 0.00 0.00 6.13
585 1237 2.219674 CGCTCATCAGAAACCTTATCGC 59.780 50.000 0.00 0.00 0.00 4.58
586 1238 3.243877 CACGCTCATCAGAAACCTTATCG 59.756 47.826 0.00 0.00 0.00 2.92
596 1248 2.004733 CAAGCAATCACGCTCATCAGA 58.995 47.619 0.00 0.00 42.89 3.27
597 1249 1.531264 GCAAGCAATCACGCTCATCAG 60.531 52.381 0.00 0.00 42.89 2.90
601 1253 4.384599 AGCAAGCAATCACGCTCA 57.615 50.000 0.00 0.00 42.89 4.26
606 1258 2.224079 TCGAACTTGAGCAAGCAATCAC 59.776 45.455 9.99 0.00 41.99 3.06
628 1280 2.296752 TGGTCGGTCGTCAAAGATGTAA 59.703 45.455 0.00 0.00 0.00 2.41
632 1284 1.134788 GGATGGTCGGTCGTCAAAGAT 60.135 52.381 0.00 0.00 0.00 2.40
633 1285 0.245539 GGATGGTCGGTCGTCAAAGA 59.754 55.000 0.00 0.00 0.00 2.52
634 1286 0.246635 AGGATGGTCGGTCGTCAAAG 59.753 55.000 0.00 0.00 0.00 2.77
635 1287 1.203052 GTAGGATGGTCGGTCGTCAAA 59.797 52.381 0.00 0.00 0.00 2.69
636 1288 0.813184 GTAGGATGGTCGGTCGTCAA 59.187 55.000 0.00 0.00 0.00 3.18
637 1289 1.033746 GGTAGGATGGTCGGTCGTCA 61.034 60.000 0.00 0.00 0.00 4.35
638 1290 1.732308 GGTAGGATGGTCGGTCGTC 59.268 63.158 0.00 0.00 0.00 4.20
639 1291 1.755783 GGGTAGGATGGTCGGTCGT 60.756 63.158 0.00 0.00 0.00 4.34
640 1292 2.496291 GGGGTAGGATGGTCGGTCG 61.496 68.421 0.00 0.00 0.00 4.79
642 1294 2.041197 GGGGGTAGGATGGTCGGT 60.041 66.667 0.00 0.00 0.00 4.69
643 1295 1.837499 GAGGGGGTAGGATGGTCGG 60.837 68.421 0.00 0.00 0.00 4.79
645 1297 2.111972 TCATAGAGGGGGTAGGATGGTC 59.888 54.545 0.00 0.00 0.00 4.02
646 1298 2.161624 TCATAGAGGGGGTAGGATGGT 58.838 52.381 0.00 0.00 0.00 3.55
647 1299 3.110705 CATCATAGAGGGGGTAGGATGG 58.889 54.545 0.00 0.00 35.83 3.51
648 1300 4.066578 TCATCATAGAGGGGGTAGGATG 57.933 50.000 0.00 0.00 39.14 3.51
649 1301 4.430441 GTTCATCATAGAGGGGGTAGGAT 58.570 47.826 0.00 0.00 0.00 3.24
650 1302 3.754172 CGTTCATCATAGAGGGGGTAGGA 60.754 52.174 0.00 0.00 0.00 2.94
651 1303 2.563179 CGTTCATCATAGAGGGGGTAGG 59.437 54.545 0.00 0.00 0.00 3.18
652 1304 2.563179 CCGTTCATCATAGAGGGGGTAG 59.437 54.545 0.00 0.00 0.00 3.18
653 1305 2.605257 CCGTTCATCATAGAGGGGGTA 58.395 52.381 0.00 0.00 0.00 3.69
654 1306 1.424638 CCGTTCATCATAGAGGGGGT 58.575 55.000 0.00 0.00 0.00 4.95
655 1307 0.035458 GCCGTTCATCATAGAGGGGG 59.965 60.000 0.00 0.00 0.00 5.40
656 1308 1.051812 AGCCGTTCATCATAGAGGGG 58.948 55.000 0.00 0.00 0.00 4.79
657 1309 1.875576 GCAGCCGTTCATCATAGAGGG 60.876 57.143 0.00 0.00 0.00 4.30
658 1310 1.506493 GCAGCCGTTCATCATAGAGG 58.494 55.000 0.00 0.00 0.00 3.69
659 1311 1.135046 CGCAGCCGTTCATCATAGAG 58.865 55.000 0.00 0.00 0.00 2.43
660 1312 3.272766 CGCAGCCGTTCATCATAGA 57.727 52.632 0.00 0.00 0.00 1.98
671 1323 2.456119 GGTGAAGATGACGCAGCCG 61.456 63.158 0.00 0.00 41.14 5.52
676 1328 2.076100 TCATTGTGGTGAAGATGACGC 58.924 47.619 0.00 0.00 0.00 5.19
679 1331 5.375773 TGAGTTTCATTGTGGTGAAGATGA 58.624 37.500 0.00 0.00 39.13 2.92
683 1335 7.149569 ACATATGAGTTTCATTGTGGTGAAG 57.850 36.000 10.38 0.00 39.13 3.02
701 1353 7.443272 TGCCAACAGAGATATTCAGAACATATG 59.557 37.037 0.00 0.00 0.00 1.78
702 1354 7.512130 TGCCAACAGAGATATTCAGAACATAT 58.488 34.615 0.00 0.00 0.00 1.78
703 1355 6.888105 TGCCAACAGAGATATTCAGAACATA 58.112 36.000 0.00 0.00 0.00 2.29
704 1356 5.748402 TGCCAACAGAGATATTCAGAACAT 58.252 37.500 0.00 0.00 0.00 2.71
705 1357 5.164620 TGCCAACAGAGATATTCAGAACA 57.835 39.130 0.00 0.00 0.00 3.18
706 1358 5.587844 ACATGCCAACAGAGATATTCAGAAC 59.412 40.000 0.00 0.00 0.00 3.01
707 1359 5.587443 CACATGCCAACAGAGATATTCAGAA 59.413 40.000 0.00 0.00 0.00 3.02
708 1360 5.121105 CACATGCCAACAGAGATATTCAGA 58.879 41.667 0.00 0.00 0.00 3.27
709 1361 4.880120 ACACATGCCAACAGAGATATTCAG 59.120 41.667 0.00 0.00 0.00 3.02
710 1362 4.847198 ACACATGCCAACAGAGATATTCA 58.153 39.130 0.00 0.00 0.00 2.57
711 1363 5.824904 AACACATGCCAACAGAGATATTC 57.175 39.130 0.00 0.00 0.00 1.75
712 1364 5.294306 CGTAACACATGCCAACAGAGATATT 59.706 40.000 0.00 0.00 0.00 1.28
713 1365 4.811024 CGTAACACATGCCAACAGAGATAT 59.189 41.667 0.00 0.00 0.00 1.63
714 1366 4.180817 CGTAACACATGCCAACAGAGATA 58.819 43.478 0.00 0.00 0.00 1.98
715 1367 3.002791 CGTAACACATGCCAACAGAGAT 58.997 45.455 0.00 0.00 0.00 2.75
716 1368 2.412870 CGTAACACATGCCAACAGAGA 58.587 47.619 0.00 0.00 0.00 3.10
717 1369 1.464608 CCGTAACACATGCCAACAGAG 59.535 52.381 0.00 0.00 0.00 3.35
718 1370 1.518325 CCGTAACACATGCCAACAGA 58.482 50.000 0.00 0.00 0.00 3.41
719 1371 0.521291 CCCGTAACACATGCCAACAG 59.479 55.000 0.00 0.00 0.00 3.16
720 1372 0.891449 CCCCGTAACACATGCCAACA 60.891 55.000 0.00 0.00 0.00 3.33
721 1373 1.880186 CCCCGTAACACATGCCAAC 59.120 57.895 0.00 0.00 0.00 3.77
722 1374 1.974343 GCCCCGTAACACATGCCAA 60.974 57.895 0.00 0.00 0.00 4.52
723 1375 2.360600 GCCCCGTAACACATGCCA 60.361 61.111 0.00 0.00 0.00 4.92
734 1386 0.255890 AGACTTTGCATATGCCCCGT 59.744 50.000 24.54 17.15 41.18 5.28
757 1409 3.005050 ACTGACATGCCAAAATCACACAG 59.995 43.478 0.00 0.00 0.00 3.66
769 1421 2.412089 GTCACGACTTTACTGACATGCC 59.588 50.000 0.00 0.00 35.39 4.40
772 1424 3.909776 TCGTCACGACTTTACTGACAT 57.090 42.857 0.00 0.00 35.06 3.06
778 1430 6.390987 AATTCAGATTCGTCACGACTTTAC 57.609 37.500 0.00 0.00 34.89 2.01
790 1442 9.588774 TTTTCTGTTACGTTTAATTCAGATTCG 57.411 29.630 0.00 0.00 33.10 3.34
795 1447 9.878599 AGTGATTTTCTGTTACGTTTAATTCAG 57.121 29.630 0.00 0.00 0.00 3.02
839 1512 9.872757 GTCTCGTTATTTCAAGTTTCAACATAA 57.127 29.630 0.00 0.00 0.00 1.90
841 1514 7.925993 TGTCTCGTTATTTCAAGTTTCAACAT 58.074 30.769 0.00 0.00 0.00 2.71
857 1530 4.556135 CGATCGCTAAGTTTTGTCTCGTTA 59.444 41.667 0.26 0.00 0.00 3.18
898 1571 8.383175 AGTAAATTGTTTACAGGAGATCCTTGA 58.617 33.333 13.27 0.00 46.65 3.02
899 1572 8.567285 AGTAAATTGTTTACAGGAGATCCTTG 57.433 34.615 13.27 0.00 46.65 3.61
928 1610 3.565063 TCGCTGGGGTTTTACACTTTTAC 59.435 43.478 0.00 0.00 0.00 2.01
929 1611 3.816523 CTCGCTGGGGTTTTACACTTTTA 59.183 43.478 0.00 0.00 0.00 1.52
930 1612 2.621526 CTCGCTGGGGTTTTACACTTTT 59.378 45.455 0.00 0.00 0.00 2.27
931 1613 2.158726 TCTCGCTGGGGTTTTACACTTT 60.159 45.455 0.00 0.00 0.00 2.66
932 1614 1.418637 TCTCGCTGGGGTTTTACACTT 59.581 47.619 0.00 0.00 0.00 3.16
933 1615 1.053424 TCTCGCTGGGGTTTTACACT 58.947 50.000 0.00 0.00 0.00 3.55
934 1616 1.154197 GTCTCGCTGGGGTTTTACAC 58.846 55.000 0.00 0.00 0.00 2.90
935 1617 0.759959 TGTCTCGCTGGGGTTTTACA 59.240 50.000 0.00 0.00 0.00 2.41
994 1676 3.059386 GTTCCGCGCCATTGGGAA 61.059 61.111 9.32 9.32 37.49 3.97
1066 1748 1.475280 GACCGGTGGGATTTTAAAGGC 59.525 52.381 14.63 0.00 36.97 4.35
1257 1939 2.158959 GCCGTCGAACAGGATCGTG 61.159 63.158 13.73 13.73 43.19 4.35
1680 2362 1.653115 CCGTCGTCCGATTCCCTAG 59.347 63.158 0.00 0.00 39.56 3.02
1734 2416 7.095816 TGAGTTGTACAACATCAAGTAATCACG 60.096 37.037 33.93 0.00 43.47 4.35
1758 2443 5.722441 TGTACACCATCTTATTACCACCTGA 59.278 40.000 0.00 0.00 0.00 3.86
1808 2495 5.531122 TCTGTATTCTACAATTCCTCCCG 57.469 43.478 0.00 0.00 38.38 5.14
1809 2496 7.509546 TGATTCTGTATTCTACAATTCCTCCC 58.490 38.462 0.00 0.00 38.38 4.30
1812 2499 8.324191 TCCTGATTCTGTATTCTACAATTCCT 57.676 34.615 0.00 0.00 38.38 3.36
1836 2535 6.303259 GTGAGAAATACGCATCAAACACTTTC 59.697 38.462 0.00 0.00 0.00 2.62
1838 2537 5.238432 TGTGAGAAATACGCATCAAACACTT 59.762 36.000 0.00 0.00 0.00 3.16
1853 2552 4.425577 GAACCAATTCGCTGTGAGAAAT 57.574 40.909 0.00 0.00 0.00 2.17
1871 2570 0.872388 AACCCAGAAACGCATCGAAC 59.128 50.000 0.00 0.00 0.00 3.95
1874 2576 1.086696 ATCAACCCAGAAACGCATCG 58.913 50.000 0.00 0.00 0.00 3.84
1887 2589 1.795768 TCGCACACTCTTCATCAACC 58.204 50.000 0.00 0.00 0.00 3.77
1943 2658 7.760340 ACGAAAGAAAGATCAACTATACAGGTC 59.240 37.037 0.00 0.00 0.00 3.85
1945 2660 8.480643 AACGAAAGAAAGATCAACTATACAGG 57.519 34.615 0.00 0.00 0.00 4.00
1965 2680 9.369904 GGAGTAGTGGTTAATAACAATAACGAA 57.630 33.333 5.45 0.00 34.74 3.85
1966 2681 8.530311 TGGAGTAGTGGTTAATAACAATAACGA 58.470 33.333 5.45 0.00 34.74 3.85
1967 2682 8.706492 TGGAGTAGTGGTTAATAACAATAACG 57.294 34.615 5.45 0.00 34.74 3.18
1971 2686 8.927675 TTGTTGGAGTAGTGGTTAATAACAAT 57.072 30.769 5.45 0.00 32.54 2.71
1972 2687 8.749026 TTTGTTGGAGTAGTGGTTAATAACAA 57.251 30.769 5.45 0.00 34.77 2.83
1973 2688 8.788806 CATTTGTTGGAGTAGTGGTTAATAACA 58.211 33.333 5.45 0.00 0.00 2.41
1974 2689 8.789762 ACATTTGTTGGAGTAGTGGTTAATAAC 58.210 33.333 0.00 0.00 0.00 1.89
1975 2690 8.927675 ACATTTGTTGGAGTAGTGGTTAATAA 57.072 30.769 0.00 0.00 0.00 1.40
1976 2691 8.927675 AACATTTGTTGGAGTAGTGGTTAATA 57.072 30.769 0.00 0.00 36.80 0.98
1977 2692 7.308348 CGAACATTTGTTGGAGTAGTGGTTAAT 60.308 37.037 0.00 0.00 38.56 1.40
1978 2693 6.017770 CGAACATTTGTTGGAGTAGTGGTTAA 60.018 38.462 0.00 0.00 38.56 2.01
1979 2694 5.467399 CGAACATTTGTTGGAGTAGTGGTTA 59.533 40.000 0.00 0.00 38.56 2.85
1980 2695 4.274950 CGAACATTTGTTGGAGTAGTGGTT 59.725 41.667 0.00 0.00 38.56 3.67
1981 2696 3.813166 CGAACATTTGTTGGAGTAGTGGT 59.187 43.478 0.00 0.00 38.56 4.16
1982 2697 3.813166 ACGAACATTTGTTGGAGTAGTGG 59.187 43.478 11.67 0.00 38.56 4.00
1983 2698 4.509970 TCACGAACATTTGTTGGAGTAGTG 59.490 41.667 11.67 7.19 38.56 2.74
1984 2699 4.510340 GTCACGAACATTTGTTGGAGTAGT 59.490 41.667 11.67 0.00 38.56 2.73
1985 2700 4.750098 AGTCACGAACATTTGTTGGAGTAG 59.250 41.667 11.67 0.88 38.56 2.57
1986 2701 4.509970 CAGTCACGAACATTTGTTGGAGTA 59.490 41.667 11.67 0.00 38.56 2.59
1987 2702 3.312421 CAGTCACGAACATTTGTTGGAGT 59.688 43.478 11.67 2.18 38.56 3.85
1988 2703 3.559655 TCAGTCACGAACATTTGTTGGAG 59.440 43.478 11.67 4.81 38.56 3.86
1989 2704 3.311322 GTCAGTCACGAACATTTGTTGGA 59.689 43.478 11.67 0.00 38.56 3.53
1990 2705 3.064682 TGTCAGTCACGAACATTTGTTGG 59.935 43.478 0.00 2.24 38.56 3.77
1991 2706 4.271590 TGTCAGTCACGAACATTTGTTG 57.728 40.909 0.00 0.00 38.56 3.33
1992 2707 4.318760 CGATGTCAGTCACGAACATTTGTT 60.319 41.667 0.00 0.00 41.64 2.83
1993 2708 3.184379 CGATGTCAGTCACGAACATTTGT 59.816 43.478 0.00 0.00 33.91 2.83
1994 2709 3.184379 ACGATGTCAGTCACGAACATTTG 59.816 43.478 0.00 0.37 33.91 2.32
1995 2710 3.390135 ACGATGTCAGTCACGAACATTT 58.610 40.909 0.00 0.00 33.91 2.32
1996 2711 3.026630 ACGATGTCAGTCACGAACATT 57.973 42.857 0.00 0.00 33.91 2.71
1997 2712 2.724977 ACGATGTCAGTCACGAACAT 57.275 45.000 0.00 0.00 36.37 2.71
1998 2713 2.551032 AGTACGATGTCAGTCACGAACA 59.449 45.455 0.00 0.00 0.00 3.18
1999 2714 3.120269 AGAGTACGATGTCAGTCACGAAC 60.120 47.826 0.00 0.00 0.00 3.95
2000 2715 3.072211 AGAGTACGATGTCAGTCACGAA 58.928 45.455 0.00 0.00 0.00 3.85
2001 2716 2.415512 CAGAGTACGATGTCAGTCACGA 59.584 50.000 0.00 0.00 0.00 4.35
2002 2717 2.159824 ACAGAGTACGATGTCAGTCACG 59.840 50.000 0.00 0.00 0.00 4.35
2003 2718 3.058155 ACACAGAGTACGATGTCAGTCAC 60.058 47.826 3.35 0.00 0.00 3.67
2004 2719 3.146847 ACACAGAGTACGATGTCAGTCA 58.853 45.455 3.35 0.00 0.00 3.41
2005 2720 3.833545 ACACAGAGTACGATGTCAGTC 57.166 47.619 3.35 0.00 0.00 3.51
2006 2721 4.547532 GAAACACAGAGTACGATGTCAGT 58.452 43.478 3.35 0.00 0.00 3.41
2007 2722 3.604198 CGAAACACAGAGTACGATGTCAG 59.396 47.826 3.35 0.00 33.91 3.51
2008 2723 3.561503 CGAAACACAGAGTACGATGTCA 58.438 45.455 3.35 0.00 33.91 3.58
2089 2804 2.667470 TCTGGCCTGATAGGTGTCTAC 58.333 52.381 8.48 0.00 37.80 2.59
2090 2805 3.619900 ATCTGGCCTGATAGGTGTCTA 57.380 47.619 22.52 0.00 37.80 2.59
2091 2806 2.485966 ATCTGGCCTGATAGGTGTCT 57.514 50.000 22.52 0.00 37.80 3.41
2092 2807 2.546795 CGAATCTGGCCTGATAGGTGTC 60.547 54.545 23.86 16.11 37.80 3.67
2093 2808 1.414181 CGAATCTGGCCTGATAGGTGT 59.586 52.381 23.86 9.32 37.80 4.16
2094 2809 1.688735 TCGAATCTGGCCTGATAGGTG 59.311 52.381 23.86 14.14 37.80 4.00
2095 2810 2.088104 TCGAATCTGGCCTGATAGGT 57.912 50.000 23.86 10.05 37.80 3.08
2122 2837 7.983484 TGAACGAGGACTAAAGTACTTTTCTTT 59.017 33.333 25.07 15.25 39.86 2.52
2127 2842 5.510349 GGGTGAACGAGGACTAAAGTACTTT 60.510 44.000 23.58 23.58 39.86 2.66
2136 2851 1.002069 TAGGGGGTGAACGAGGACTA 58.998 55.000 0.00 0.00 0.00 2.59
2137 2852 0.614134 GTAGGGGGTGAACGAGGACT 60.614 60.000 0.00 0.00 0.00 3.85
2138 2853 1.895966 GTAGGGGGTGAACGAGGAC 59.104 63.158 0.00 0.00 0.00 3.85
2139 2854 1.679977 CGTAGGGGGTGAACGAGGA 60.680 63.158 0.00 0.00 38.89 3.71
2141 2856 0.108945 GTTCGTAGGGGGTGAACGAG 60.109 60.000 0.00 0.00 45.32 4.18
2144 2859 0.318120 TTCGTTCGTAGGGGGTGAAC 59.682 55.000 0.00 0.00 38.83 3.18
2160 2876 1.514553 GGACCCTACCTTCCGTTCG 59.485 63.158 0.00 0.00 0.00 3.95
2196 2912 4.952335 AGTCATATCTTTGGCTTTTCCCTG 59.048 41.667 0.00 0.00 0.00 4.45
2197 2913 4.952335 CAGTCATATCTTTGGCTTTTCCCT 59.048 41.667 0.00 0.00 26.21 4.20
2219 2935 3.433031 CCAACAGAACTGGGAACACTACA 60.433 47.826 6.76 0.00 35.60 2.74
2223 2939 1.947456 GTCCAACAGAACTGGGAACAC 59.053 52.381 6.76 0.00 34.46 3.32
2308 6579 2.359975 GCCGGTCAGTTTGGGGAG 60.360 66.667 1.90 0.00 0.00 4.30
2312 6583 3.622060 ATCGGGCCGGTCAGTTTGG 62.622 63.158 27.98 0.00 0.00 3.28
2313 6584 2.046314 ATCGGGCCGGTCAGTTTG 60.046 61.111 27.98 0.00 0.00 2.93
2314 6585 2.046314 CATCGGGCCGGTCAGTTT 60.046 61.111 27.98 0.00 0.00 2.66
2315 6586 4.096003 CCATCGGGCCGGTCAGTT 62.096 66.667 27.98 0.00 0.00 3.16
2327 6598 1.227263 CTTAGTGACCGGGCCATCG 60.227 63.158 3.83 0.00 0.00 3.84
2328 6599 1.146263 CCTTAGTGACCGGGCCATC 59.854 63.158 3.83 0.16 0.00 3.51
2329 6600 3.043999 GCCTTAGTGACCGGGCCAT 62.044 63.158 3.83 0.00 38.77 4.40
2330 6601 3.712907 GCCTTAGTGACCGGGCCA 61.713 66.667 3.83 0.00 38.77 5.36
2332 6603 3.262448 TTGGCCTTAGTGACCGGGC 62.262 63.158 6.32 1.57 43.42 6.13
2333 6604 1.376812 GTTGGCCTTAGTGACCGGG 60.377 63.158 6.32 0.00 0.00 5.73
2334 6605 0.391263 GAGTTGGCCTTAGTGACCGG 60.391 60.000 3.32 0.00 0.00 5.28
2335 6606 0.391263 GGAGTTGGCCTTAGTGACCG 60.391 60.000 3.32 0.00 0.00 4.79
2336 6607 0.690762 TGGAGTTGGCCTTAGTGACC 59.309 55.000 3.32 0.00 0.00 4.02
2337 6608 1.610886 GGTGGAGTTGGCCTTAGTGAC 60.611 57.143 3.32 0.00 0.00 3.67
2338 6609 0.690762 GGTGGAGTTGGCCTTAGTGA 59.309 55.000 3.32 0.00 0.00 3.41
2339 6610 0.673644 CGGTGGAGTTGGCCTTAGTG 60.674 60.000 3.32 0.00 0.00 2.74
2340 6611 1.677552 CGGTGGAGTTGGCCTTAGT 59.322 57.895 3.32 0.00 0.00 2.24
2341 6612 1.745489 GCGGTGGAGTTGGCCTTAG 60.745 63.158 3.32 0.00 0.00 2.18
2342 6613 2.349755 GCGGTGGAGTTGGCCTTA 59.650 61.111 3.32 0.00 0.00 2.69
2347 6618 4.025401 GTTGCGCGGTGGAGTTGG 62.025 66.667 8.83 0.00 0.00 3.77
2348 6619 4.025401 GGTTGCGCGGTGGAGTTG 62.025 66.667 8.83 0.00 0.00 3.16
2358 6629 3.134127 GACAGGATGGGGTTGCGC 61.134 66.667 0.00 0.00 43.62 6.09
2359 6630 2.438434 GGACAGGATGGGGTTGCG 60.438 66.667 0.00 0.00 43.62 4.85
2360 6631 2.438434 CGGACAGGATGGGGTTGC 60.438 66.667 0.00 0.00 43.62 4.17
2361 6632 2.272146 CCGGACAGGATGGGGTTG 59.728 66.667 0.00 0.00 45.00 3.77
2362 6633 2.204090 ACCGGACAGGATGGGGTT 60.204 61.111 9.46 0.00 45.00 4.11
2363 6634 2.687566 GACCGGACAGGATGGGGT 60.688 66.667 9.46 0.00 45.00 4.95
2364 6635 2.365635 AGACCGGACAGGATGGGG 60.366 66.667 9.46 0.00 45.00 4.96
2365 6636 1.050988 ATGAGACCGGACAGGATGGG 61.051 60.000 9.46 0.00 45.00 4.00
2366 6637 0.390860 GATGAGACCGGACAGGATGG 59.609 60.000 9.46 0.00 45.00 3.51
2367 6638 0.390860 GGATGAGACCGGACAGGATG 59.609 60.000 9.46 0.00 45.00 3.51
2368 6639 2.827715 GGATGAGACCGGACAGGAT 58.172 57.895 9.46 0.00 45.00 3.24
2369 6640 4.356979 GGATGAGACCGGACAGGA 57.643 61.111 9.46 0.00 45.00 3.86
2380 6651 7.751732 TGTTCATTTTATCTCAAACGGATGAG 58.248 34.615 12.12 12.12 46.62 2.90
2381 6652 7.680442 TGTTCATTTTATCTCAAACGGATGA 57.320 32.000 0.00 0.00 0.00 2.92
2382 6653 8.638565 GTTTGTTCATTTTATCTCAAACGGATG 58.361 33.333 0.00 0.00 36.54 3.51
2383 6654 7.812669 GGTTTGTTCATTTTATCTCAAACGGAT 59.187 33.333 0.00 0.00 42.72 4.18
2384 6655 7.142680 GGTTTGTTCATTTTATCTCAAACGGA 58.857 34.615 0.00 0.00 42.72 4.69
2385 6656 6.087555 CGGTTTGTTCATTTTATCTCAAACGG 59.912 38.462 0.00 0.00 42.72 4.44
2386 6657 6.087555 CCGGTTTGTTCATTTTATCTCAAACG 59.912 38.462 0.00 0.00 42.72 3.60
2387 6658 7.114388 GTCCGGTTTGTTCATTTTATCTCAAAC 59.886 37.037 0.00 0.00 41.77 2.93
2388 6659 7.142680 GTCCGGTTTGTTCATTTTATCTCAAA 58.857 34.615 0.00 0.00 0.00 2.69
2389 6660 6.566942 CGTCCGGTTTGTTCATTTTATCTCAA 60.567 38.462 0.00 0.00 0.00 3.02
2390 6661 5.106869 CGTCCGGTTTGTTCATTTTATCTCA 60.107 40.000 0.00 0.00 0.00 3.27
2391 6662 5.321516 CGTCCGGTTTGTTCATTTTATCTC 58.678 41.667 0.00 0.00 0.00 2.75
2392 6663 4.155280 CCGTCCGGTTTGTTCATTTTATCT 59.845 41.667 0.00 0.00 0.00 1.98
2393 6664 4.408694 CCGTCCGGTTTGTTCATTTTATC 58.591 43.478 0.00 0.00 0.00 1.75
2394 6665 3.366577 GCCGTCCGGTTTGTTCATTTTAT 60.367 43.478 7.66 0.00 37.65 1.40
2395 6666 2.030981 GCCGTCCGGTTTGTTCATTTTA 60.031 45.455 7.66 0.00 37.65 1.52
2396 6667 1.269361 GCCGTCCGGTTTGTTCATTTT 60.269 47.619 7.66 0.00 37.65 1.82
2397 6668 0.312729 GCCGTCCGGTTTGTTCATTT 59.687 50.000 7.66 0.00 37.65 2.32
2398 6669 1.520600 GGCCGTCCGGTTTGTTCATT 61.521 55.000 7.66 0.00 37.65 2.57
2399 6670 1.969589 GGCCGTCCGGTTTGTTCAT 60.970 57.895 7.66 0.00 37.65 2.57
2400 6671 2.592287 GGCCGTCCGGTTTGTTCA 60.592 61.111 7.66 0.00 37.65 3.18
2401 6672 3.359523 GGGCCGTCCGGTTTGTTC 61.360 66.667 7.66 0.00 37.65 3.18
2402 6673 4.192453 TGGGCCGTCCGGTTTGTT 62.192 61.111 7.66 0.00 38.76 2.83
2403 6674 4.636435 CTGGGCCGTCCGGTTTGT 62.636 66.667 7.66 0.00 38.76 2.83
2425 6696 4.547367 GATGGGTCCGGGCCTTCG 62.547 72.222 27.44 0.00 0.00 3.79
2426 6697 2.757124 ATGATGGGTCCGGGCCTTC 61.757 63.158 27.44 21.99 0.00 3.46
2427 6698 2.696125 ATGATGGGTCCGGGCCTT 60.696 61.111 27.44 13.54 0.00 4.35
2428 6699 3.492353 CATGATGGGTCCGGGCCT 61.492 66.667 27.44 5.55 0.00 5.19
2429 6700 3.774599 GACATGATGGGTCCGGGCC 62.775 68.421 19.72 19.72 0.00 5.80
2430 6701 2.203209 GACATGATGGGTCCGGGC 60.203 66.667 0.00 0.00 0.00 6.13
2431 6702 2.510906 GGACATGATGGGTCCGGG 59.489 66.667 0.00 0.00 44.80 5.73
2435 6706 3.945285 ACATAAAACGGACATGATGGGTC 59.055 43.478 0.00 0.00 34.52 4.46
2436 6707 3.945285 GACATAAAACGGACATGATGGGT 59.055 43.478 0.00 0.00 0.00 4.51
2437 6708 3.315191 GGACATAAAACGGACATGATGGG 59.685 47.826 0.00 0.00 0.00 4.00
2438 6709 3.002246 CGGACATAAAACGGACATGATGG 59.998 47.826 0.00 0.00 0.00 3.51
2439 6710 4.195744 CGGACATAAAACGGACATGATG 57.804 45.455 0.00 0.00 0.00 3.07
2447 6718 2.466140 CGGCCCGGACATAAAACGG 61.466 63.158 0.73 0.00 46.79 4.44
2448 6719 1.448189 TCGGCCCGGACATAAAACG 60.448 57.895 0.73 0.00 0.00 3.60
2449 6720 1.371337 GGTCGGCCCGGACATAAAAC 61.371 60.000 0.73 0.00 38.70 2.43
2450 6721 1.078285 GGTCGGCCCGGACATAAAA 60.078 57.895 0.73 0.00 38.70 1.52
2451 6722 2.585698 GGTCGGCCCGGACATAAA 59.414 61.111 0.73 0.00 38.70 1.40
2452 6723 3.472726 GGGTCGGCCCGGACATAA 61.473 66.667 10.71 0.00 46.51 1.90
2461 6732 3.202706 GCTCGAAATGGGTCGGCC 61.203 66.667 0.00 0.00 41.43 6.13
2462 6733 2.894240 TACGCTCGAAATGGGTCGGC 62.894 60.000 0.00 0.00 41.43 5.54
2463 6734 0.458889 TTACGCTCGAAATGGGTCGG 60.459 55.000 0.00 0.00 41.43 4.79
2464 6735 1.060122 GTTTACGCTCGAAATGGGTCG 59.940 52.381 0.00 0.00 42.48 4.79
2465 6736 2.344025 AGTTTACGCTCGAAATGGGTC 58.656 47.619 0.00 0.00 32.83 4.46
2466 6737 2.467566 AGTTTACGCTCGAAATGGGT 57.532 45.000 0.00 0.00 34.92 4.51
2467 6738 2.727916 GCAAGTTTACGCTCGAAATGGG 60.728 50.000 0.00 0.00 0.00 4.00
2468 6739 2.505866 GCAAGTTTACGCTCGAAATGG 58.494 47.619 0.00 0.00 0.00 3.16
2469 6740 2.158143 CGCAAGTTTACGCTCGAAATG 58.842 47.619 0.00 0.00 0.00 2.32
2470 6741 2.503943 CGCAAGTTTACGCTCGAAAT 57.496 45.000 0.00 0.00 0.00 2.17
2478 6749 0.309612 AAACCCAGCGCAAGTTTACG 59.690 50.000 17.39 0.00 41.68 3.18
2479 6750 1.662026 CGAAACCCAGCGCAAGTTTAC 60.662 52.381 18.45 12.60 41.68 2.01
2480 6751 0.589223 CGAAACCCAGCGCAAGTTTA 59.411 50.000 18.45 0.00 41.68 2.01
2481 6752 1.358759 CGAAACCCAGCGCAAGTTT 59.641 52.632 18.48 18.48 41.68 2.66
2482 6753 2.551912 CCGAAACCCAGCGCAAGTT 61.552 57.895 11.47 7.07 41.68 2.66
2483 6754 2.978010 CCGAAACCCAGCGCAAGT 60.978 61.111 11.47 0.00 41.68 3.16
2484 6755 2.966309 GACCGAAACCCAGCGCAAG 61.966 63.158 11.47 0.38 43.44 4.01
2485 6756 2.975799 GACCGAAACCCAGCGCAA 60.976 61.111 11.47 0.00 0.00 4.85
2488 6759 3.411351 CACGACCGAAACCCAGCG 61.411 66.667 0.00 0.00 0.00 5.18
2489 6760 3.047877 CCACGACCGAAACCCAGC 61.048 66.667 0.00 0.00 0.00 4.85
2490 6761 3.047877 GCCACGACCGAAACCCAG 61.048 66.667 0.00 0.00 0.00 4.45
2491 6762 4.973055 CGCCACGACCGAAACCCA 62.973 66.667 0.00 0.00 0.00 4.51
2493 6764 4.668118 TCCGCCACGACCGAAACC 62.668 66.667 0.00 0.00 0.00 3.27
2494 6765 3.408851 GTCCGCCACGACCGAAAC 61.409 66.667 0.00 0.00 0.00 2.78
2504 6775 4.912485 TTCGTTTGCCGTCCGCCA 62.912 61.111 0.00 0.00 37.94 5.69
2505 6776 4.379143 GTTCGTTTGCCGTCCGCC 62.379 66.667 0.00 0.00 37.94 6.13
2506 6777 4.712873 CGTTCGTTTGCCGTCCGC 62.713 66.667 0.00 0.00 37.94 5.54
2507 6778 4.712873 GCGTTCGTTTGCCGTCCG 62.713 66.667 0.00 0.00 37.94 4.79
2508 6779 4.712873 CGCGTTCGTTTGCCGTCC 62.713 66.667 0.00 0.00 37.94 4.79
2537 6808 4.814294 GAGGTACGTGGCCGCCTG 62.814 72.222 11.56 5.81 37.70 4.85
2541 6812 4.446413 GTGGGAGGTACGTGGCCG 62.446 72.222 0.00 0.00 40.83 6.13
2542 6813 4.091939 GGTGGGAGGTACGTGGCC 62.092 72.222 0.00 0.00 0.00 5.36
2543 6814 4.446413 CGGTGGGAGGTACGTGGC 62.446 72.222 0.00 0.00 0.00 5.01
2544 6815 4.446413 GCGGTGGGAGGTACGTGG 62.446 72.222 0.00 0.00 0.00 4.94
2545 6816 4.446413 GGCGGTGGGAGGTACGTG 62.446 72.222 0.00 0.00 0.00 4.49
2546 6817 4.691359 AGGCGGTGGGAGGTACGT 62.691 66.667 0.00 0.00 0.00 3.57
2547 6818 4.143333 CAGGCGGTGGGAGGTACG 62.143 72.222 0.00 0.00 0.00 3.67
2548 6819 2.682494 TCAGGCGGTGGGAGGTAC 60.682 66.667 0.00 0.00 0.00 3.34
2549 6820 2.682494 GTCAGGCGGTGGGAGGTA 60.682 66.667 0.00 0.00 0.00 3.08
2550 6821 2.815684 TATGTCAGGCGGTGGGAGGT 62.816 60.000 0.00 0.00 0.00 3.85
2551 6822 1.622607 TTATGTCAGGCGGTGGGAGG 61.623 60.000 0.00 0.00 0.00 4.30
2552 6823 0.251916 TTTATGTCAGGCGGTGGGAG 59.748 55.000 0.00 0.00 0.00 4.30
2553 6824 0.916086 ATTTATGTCAGGCGGTGGGA 59.084 50.000 0.00 0.00 0.00 4.37
2554 6825 1.024271 CATTTATGTCAGGCGGTGGG 58.976 55.000 0.00 0.00 0.00 4.61
2555 6826 0.381801 GCATTTATGTCAGGCGGTGG 59.618 55.000 0.00 0.00 0.00 4.61
2556 6827 0.027979 CGCATTTATGTCAGGCGGTG 59.972 55.000 0.00 0.00 43.63 4.94
2557 6828 2.393557 CGCATTTATGTCAGGCGGT 58.606 52.632 0.00 0.00 43.63 5.68
2560 6831 1.260561 CCGTACGCATTTATGTCAGGC 59.739 52.381 10.49 0.00 0.00 4.85
2561 6832 1.864711 CCCGTACGCATTTATGTCAGG 59.135 52.381 10.49 0.00 0.00 3.86
2562 6833 2.284150 CACCCGTACGCATTTATGTCAG 59.716 50.000 10.49 0.00 0.00 3.51
2563 6834 2.272678 CACCCGTACGCATTTATGTCA 58.727 47.619 10.49 0.00 0.00 3.58
2564 6835 1.595794 CCACCCGTACGCATTTATGTC 59.404 52.381 10.49 0.00 0.00 3.06
2565 6836 1.065998 ACCACCCGTACGCATTTATGT 60.066 47.619 10.49 0.00 0.00 2.29
2566 6837 1.595794 GACCACCCGTACGCATTTATG 59.404 52.381 10.49 1.01 0.00 1.90
2567 6838 1.803625 CGACCACCCGTACGCATTTAT 60.804 52.381 10.49 0.00 0.00 1.40
2568 6839 0.458197 CGACCACCCGTACGCATTTA 60.458 55.000 10.49 0.00 0.00 1.40
2569 6840 1.738830 CGACCACCCGTACGCATTT 60.739 57.895 10.49 0.00 0.00 2.32
2570 6841 2.125832 CGACCACCCGTACGCATT 60.126 61.111 10.49 0.00 0.00 3.56
2571 6842 3.063704 TCGACCACCCGTACGCAT 61.064 61.111 10.49 0.00 0.00 4.73
2572 6843 4.041917 GTCGACCACCCGTACGCA 62.042 66.667 10.49 0.00 0.00 5.24
2573 6844 4.783734 GGTCGACCACCCGTACGC 62.784 72.222 29.75 0.00 39.69 4.42
2582 6853 2.920912 GACAGGTGGGGTCGACCA 60.921 66.667 34.40 14.09 42.91 4.02
2583 6854 2.240162 GATGACAGGTGGGGTCGACC 62.240 65.000 27.04 27.04 38.10 4.79
2584 6855 1.218316 GATGACAGGTGGGGTCGAC 59.782 63.158 7.13 7.13 38.10 4.20
2585 6856 1.987855 GGATGACAGGTGGGGTCGA 60.988 63.158 0.00 0.00 38.10 4.20
2586 6857 2.584608 GGATGACAGGTGGGGTCG 59.415 66.667 0.00 0.00 38.10 4.79
2587 6858 2.584608 CGGATGACAGGTGGGGTC 59.415 66.667 0.00 0.00 35.83 4.46
2588 6859 3.717294 GCGGATGACAGGTGGGGT 61.717 66.667 0.00 0.00 0.00 4.95
2589 6860 4.489771 GGCGGATGACAGGTGGGG 62.490 72.222 0.00 0.00 0.00 4.96
2590 6861 4.489771 GGGCGGATGACAGGTGGG 62.490 72.222 0.00 0.00 0.00 4.61
2591 6862 3.687321 CTGGGCGGATGACAGGTGG 62.687 68.421 0.00 0.00 0.00 4.61
2592 6863 2.124983 CTGGGCGGATGACAGGTG 60.125 66.667 0.00 0.00 0.00 4.00
2593 6864 4.101448 GCTGGGCGGATGACAGGT 62.101 66.667 0.00 0.00 32.98 4.00
2611 6882 0.529378 TAAGAGGGAAGCGACCGTTC 59.471 55.000 0.00 0.00 0.00 3.95
2612 6883 0.971386 TTAAGAGGGAAGCGACCGTT 59.029 50.000 0.00 0.00 0.00 4.44
2613 6884 0.971386 TTTAAGAGGGAAGCGACCGT 59.029 50.000 0.00 0.00 0.00 4.83
2614 6885 1.933853 CATTTAAGAGGGAAGCGACCG 59.066 52.381 0.00 0.00 0.00 4.79
2615 6886 2.289565 CCATTTAAGAGGGAAGCGACC 58.710 52.381 0.00 0.00 0.00 4.79
2623 6894 3.270877 CACGACTTCCCATTTAAGAGGG 58.729 50.000 7.76 7.76 46.90 4.30
2624 6895 3.055385 TCCACGACTTCCCATTTAAGAGG 60.055 47.826 0.00 0.00 0.00 3.69
2625 6896 3.933332 GTCCACGACTTCCCATTTAAGAG 59.067 47.826 0.00 0.00 0.00 2.85
2626 6897 3.307199 GGTCCACGACTTCCCATTTAAGA 60.307 47.826 0.00 0.00 32.47 2.10
2627 6898 3.007635 GGTCCACGACTTCCCATTTAAG 58.992 50.000 0.00 0.00 32.47 1.85
2628 6899 3.062122 GGTCCACGACTTCCCATTTAA 57.938 47.619 0.00 0.00 32.47 1.52
2629 6900 2.773993 GGTCCACGACTTCCCATTTA 57.226 50.000 0.00 0.00 32.47 1.40
2630 6901 3.644861 GGTCCACGACTTCCCATTT 57.355 52.632 0.00 0.00 32.47 2.32
2649 6920 4.736896 GGAGTGTGGACGACGGCC 62.737 72.222 14.55 14.55 0.00 6.13
2650 6921 4.736896 GGGAGTGTGGACGACGGC 62.737 72.222 0.00 0.00 0.00 5.68
2651 6922 4.065281 GGGGAGTGTGGACGACGG 62.065 72.222 0.00 0.00 0.00 4.79
2652 6923 3.282745 CTGGGGAGTGTGGACGACG 62.283 68.421 0.00 0.00 0.00 5.12
2653 6924 2.156051 GACTGGGGAGTGTGGACGAC 62.156 65.000 0.00 0.00 0.00 4.34
2654 6925 1.906824 GACTGGGGAGTGTGGACGA 60.907 63.158 0.00 0.00 0.00 4.20
2655 6926 2.657237 GACTGGGGAGTGTGGACG 59.343 66.667 0.00 0.00 0.00 4.79
2656 6927 2.657237 CGACTGGGGAGTGTGGAC 59.343 66.667 0.00 0.00 0.00 4.02
2657 6928 2.603473 CCGACTGGGGAGTGTGGA 60.603 66.667 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.