Multiple sequence alignment - TraesCS5B01G201100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G201100 chr5B 100.000 9184 0 0 1 9184 363670909 363661726 0.000000e+00 16960.0
1 TraesCS5B01G201100 chr5B 95.567 203 8 1 5432 5633 84580261 84580463 3.200000e-84 324.0
2 TraesCS5B01G201100 chr5B 91.189 227 16 3 5432 5656 164185985 164185761 1.160000e-78 305.0
3 TraesCS5B01G201100 chr5A 89.853 2582 143 52 6667 9183 410197131 410194604 0.000000e+00 3206.0
4 TraesCS5B01G201100 chr5A 91.920 2240 82 32 8 2207 410204729 410202549 0.000000e+00 3042.0
5 TraesCS5B01G201100 chr5A 91.415 1293 90 17 4140 5421 410200077 410198795 0.000000e+00 1753.0
6 TraesCS5B01G201100 chr5A 90.254 944 50 18 5610 6523 410198781 410197850 0.000000e+00 1195.0
7 TraesCS5B01G201100 chr5A 87.397 849 50 18 2924 3758 410201645 410200840 0.000000e+00 922.0
8 TraesCS5B01G201100 chr5A 90.483 683 27 18 2280 2937 410202438 410201769 0.000000e+00 867.0
9 TraesCS5B01G201100 chr5A 93.103 203 14 0 3850 4052 410200317 410200115 1.940000e-76 298.0
10 TraesCS5B01G201100 chr5D 92.688 2243 76 23 8 2207 315486632 315484435 0.000000e+00 3153.0
11 TraesCS5B01G201100 chr5D 91.086 1896 103 33 7315 9183 315477246 315475390 0.000000e+00 2505.0
12 TraesCS5B01G201100 chr5D 89.860 1785 73 40 5610 7319 315481458 315479707 0.000000e+00 2194.0
13 TraesCS5B01G201100 chr5D 92.569 1386 59 20 2280 3649 315484324 315482967 0.000000e+00 1949.0
14 TraesCS5B01G201100 chr5D 91.595 928 45 16 3673 4572 315482970 315482048 0.000000e+00 1251.0
15 TraesCS5B01G201100 chr5D 92.414 580 30 4 4855 5421 315482050 315481472 0.000000e+00 815.0
16 TraesCS5B01G201100 chr6A 90.683 322 28 2 1139 1459 94227003 94227323 2.370000e-115 427.0
17 TraesCS5B01G201100 chr6A 86.667 345 39 7 1145 1485 549045506 549045165 8.710000e-100 375.0
18 TraesCS5B01G201100 chr6A 87.019 208 27 0 1664 1871 549044641 549044434 1.540000e-57 235.0
19 TraesCS5B01G201100 chr6A 81.203 266 46 4 1942 2205 94227989 94228252 2.600000e-50 211.0
20 TraesCS5B01G201100 chr6A 82.028 217 35 3 1664 1876 94227469 94227685 2.040000e-41 182.0
21 TraesCS5B01G201100 chr6A 75.127 197 35 9 4759 4941 519212285 519212089 7.640000e-11 80.5
22 TraesCS5B01G201100 chr6D 89.130 322 33 2 1139 1459 78752744 78753064 5.170000e-107 399.0
23 TraesCS5B01G201100 chr6D 95.567 203 8 1 5432 5633 468312648 468312446 3.200000e-84 324.0
24 TraesCS5B01G201100 chr6D 86.957 207 27 0 1664 1870 402352398 402352192 5.540000e-57 233.0
25 TraesCS5B01G201100 chr6D 78.333 180 31 6 4770 4941 55939307 55939128 9.750000e-20 110.0
26 TraesCS5B01G201100 chr6B 89.130 322 33 2 1139 1459 151372543 151372863 5.170000e-107 399.0
27 TraesCS5B01G201100 chr6B 85.632 348 44 6 1145 1489 603147864 603147520 2.440000e-95 361.0
28 TraesCS5B01G201100 chr6B 85.577 208 30 0 1664 1871 603146884 603146677 1.550000e-52 219.0
29 TraesCS5B01G201100 chr6B 81.579 266 45 4 1942 2205 151373546 151373809 5.580000e-52 217.0
30 TraesCS5B01G201100 chr6B 82.028 217 35 3 1664 1876 151373018 151373234 2.040000e-41 182.0
31 TraesCS5B01G201100 chr7D 87.725 334 35 5 1149 1479 93033794 93033464 1.450000e-102 385.0
32 TraesCS5B01G201100 chr7D 83.412 211 35 0 1663 1873 159737273 159737483 7.280000e-46 196.0
33 TraesCS5B01G201100 chr7B 87.425 334 36 5 1149 1479 45641973 45641643 6.730000e-101 379.0
34 TraesCS5B01G201100 chr7B 89.091 55 4 2 4760 4814 138445870 138445818 5.950000e-07 67.6
35 TraesCS5B01G201100 chr7A 77.996 559 99 16 1665 2205 96051458 96050906 6.870000e-86 329.0
36 TraesCS5B01G201100 chr7A 83.412 211 35 0 1663 1873 158395915 158396125 7.280000e-46 196.0
37 TraesCS5B01G201100 chr7A 82.653 98 15 2 4956 5052 695841040 695841136 1.640000e-12 86.1
38 TraesCS5B01G201100 chr4B 96.059 203 7 1 5432 5633 328009289 328009087 6.870000e-86 329.0
39 TraesCS5B01G201100 chr4B 96.059 203 7 1 5432 5633 330634612 330634814 6.870000e-86 329.0
40 TraesCS5B01G201100 chr4B 95.567 203 7 2 5433 5633 206242722 206242924 3.200000e-84 324.0
41 TraesCS5B01G201100 chr4D 98.378 185 3 0 5427 5611 329878595 329878779 8.890000e-85 326.0
42 TraesCS5B01G201100 chr2D 95.567 203 8 1 5432 5633 610329668 610329870 3.200000e-84 324.0
43 TraesCS5B01G201100 chr1B 95.567 203 8 1 5432 5633 174407316 174407518 3.200000e-84 324.0
44 TraesCS5B01G201100 chr1B 80.952 168 25 6 4775 4935 81753939 81754106 9.680000e-25 126.0
45 TraesCS5B01G201100 chr1B 75.600 250 47 14 4989 5231 488774041 488773799 2.710000e-20 111.0
46 TraesCS5B01G201100 chr1B 76.301 173 31 7 4768 4931 120889284 120889455 5.910000e-12 84.2
47 TraesCS5B01G201100 chr1B 91.304 46 3 1 4887 4931 119690307 119690262 2.770000e-05 62.1
48 TraesCS5B01G201100 chr3B 78.453 181 30 8 4758 4931 622091824 622091646 9.750000e-20 110.0
49 TraesCS5B01G201100 chr2A 88.000 50 3 3 4871 4919 508919319 508919272 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G201100 chr5B 363661726 363670909 9183 True 16960.000000 16960 100.000000 1 9184 1 chr5B.!!$R2 9183
1 TraesCS5B01G201100 chr5A 410194604 410204729 10125 True 1611.857143 3206 90.632143 8 9183 7 chr5A.!!$R1 9175
2 TraesCS5B01G201100 chr5D 315475390 315486632 11242 True 1977.833333 3153 91.702000 8 9183 6 chr5D.!!$R1 9175
3 TraesCS5B01G201100 chr6A 549044434 549045506 1072 True 305.000000 375 86.843000 1145 1871 2 chr6A.!!$R2 726
4 TraesCS5B01G201100 chr6A 94227003 94228252 1249 False 273.333333 427 84.638000 1139 2205 3 chr6A.!!$F1 1066
5 TraesCS5B01G201100 chr6B 603146677 603147864 1187 True 290.000000 361 85.604500 1145 1871 2 chr6B.!!$R1 726
6 TraesCS5B01G201100 chr6B 151372543 151373809 1266 False 266.000000 399 84.245667 1139 2205 3 chr6B.!!$F1 1066
7 TraesCS5B01G201100 chr7A 96050906 96051458 552 True 329.000000 329 77.996000 1665 2205 1 chr7A.!!$R1 540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
794 842 0.537143 CAGTTGCTTACACCCCAGCA 60.537 55.0 0.00 0.00 44.43 4.41 F
2217 3088 0.677288 CCAAGGTACGTCCACACTCA 59.323 55.0 0.00 0.00 39.02 3.41 F
3199 4284 0.028242 CGGAGTCTCGTCAATCCTCG 59.972 60.0 0.00 0.00 0.00 4.63 F
4127 5674 0.107945 AGCGAGTTCTTCATCAGCCC 60.108 55.0 0.00 0.00 0.00 5.19 F
4980 6546 0.110373 CACACGATCACAGACGACGA 60.110 55.0 0.00 0.00 0.00 4.20 F
6373 7982 0.179171 CGATCGAGCGCCGGTTATAT 60.179 55.0 11.25 4.26 39.14 0.86 F
7189 9471 0.248907 CGGGCGAGTAGTACACCATG 60.249 60.0 2.52 0.00 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2319 3241 0.034059 ATGCACGGTCATAGGCTAGC 59.966 55.000 6.04 6.04 0.00 3.42 R
4085 5632 0.036765 AGACAACGCCGCTTCCATTA 60.037 50.000 0.00 0.00 0.00 1.90 R
4529 6082 0.598065 GTCGGTTCCAATGCTTGCTT 59.402 50.000 0.00 0.00 0.00 3.91 R
5502 7072 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29 R
6752 9006 0.108377 CATGCCTGGCTGTGTACGTA 60.108 55.000 21.03 0.00 0.00 3.57 R
7559 12328 1.153549 CAGGTAGTGCTCCGCCTTC 60.154 63.158 0.00 0.00 0.00 3.46 R
8663 13449 0.035534 CACGTGGAACATCCCATCCA 60.036 55.000 7.95 0.00 44.52 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
211 220 2.684881 CCTACCAACGTACTACCGACAT 59.315 50.000 0.00 0.00 0.00 3.06
220 229 7.275341 CCAACGTACTACCGACATTTGTTTATA 59.725 37.037 0.00 0.00 0.00 0.98
229 238 3.942748 GACATTTGTTTATACTCGCCCCA 59.057 43.478 0.00 0.00 0.00 4.96
296 305 4.388499 CCTGCCGGTAACCAGCGT 62.388 66.667 1.90 0.00 44.06 5.07
392 401 2.208562 ATCCCCTCCCCCACTTAGCA 62.209 60.000 0.00 0.00 0.00 3.49
794 842 0.537143 CAGTTGCTTACACCCCAGCA 60.537 55.000 0.00 0.00 44.43 4.41
796 844 1.599518 TTGCTTACACCCCAGCACG 60.600 57.895 0.00 0.00 45.77 5.34
902 950 1.606668 CAAGCAAACACTCCGGCTAAA 59.393 47.619 0.00 0.00 35.11 1.85
910 958 0.763035 ACTCCGGCTAAACACAAGGT 59.237 50.000 0.00 0.00 0.00 3.50
931 984 3.261039 TTGATCGCGGGCTTTGGGA 62.261 57.895 6.13 0.00 0.00 4.37
932 985 2.897350 GATCGCGGGCTTTGGGAG 60.897 66.667 6.13 0.00 0.00 4.30
964 1017 2.737180 CGCTGGTGAGTGGTGACT 59.263 61.111 0.00 0.00 33.98 3.41
973 1026 3.349006 GTGGTGACTGCTGCCGTG 61.349 66.667 0.17 0.00 0.00 4.94
1528 1963 3.895102 TTTACCGCCACGACCGTCG 62.895 63.158 19.24 19.24 46.93 5.12
1626 2066 1.082300 CTGCGATGCGAATGATGGC 60.082 57.895 0.00 0.00 0.00 4.40
1651 2092 2.579787 GCGGACGATGTCTGACGG 60.580 66.667 9.86 0.00 41.05 4.79
1653 2094 2.404186 CGGACGATGTCTGACGGGA 61.404 63.158 2.98 0.00 41.05 5.14
1749 2345 3.037249 GCGTACCGCGTGGACAAA 61.037 61.111 24.59 0.59 44.55 2.83
1860 2459 2.284625 ATCCTCCTCCACCACGCA 60.285 61.111 0.00 0.00 0.00 5.24
1874 2473 4.021650 CGCACAACAGGTACGTGT 57.978 55.556 15.24 15.24 31.54 4.49
1875 2474 1.850640 CGCACAACAGGTACGTGTC 59.149 57.895 20.61 8.14 31.54 3.67
1900 2499 3.616284 TGGTAACACATCACCGGTG 57.384 52.632 29.26 29.26 46.17 4.94
1968 2831 0.824595 TGTTCGAGTTCGGGGACAGA 60.825 55.000 1.26 0.00 40.29 3.41
2207 3070 2.050350 TCCTCGCCTCCAAGGTACG 61.050 63.158 0.00 0.00 37.80 3.67
2208 3071 2.348888 CCTCGCCTCCAAGGTACGT 61.349 63.158 0.00 0.00 37.80 3.57
2210 3073 2.183555 CGCCTCCAAGGTACGTCC 59.816 66.667 0.00 0.00 37.80 4.79
2213 3084 1.823169 GCCTCCAAGGTACGTCCACA 61.823 60.000 0.00 0.00 37.80 4.17
2215 3086 0.966920 CTCCAAGGTACGTCCACACT 59.033 55.000 0.00 0.00 39.02 3.55
2217 3088 0.677288 CCAAGGTACGTCCACACTCA 59.323 55.000 0.00 0.00 39.02 3.41
2255 3126 8.906867 ACCTGTTCATTCATCATTTACTATTGG 58.093 33.333 0.00 0.00 0.00 3.16
2256 3127 8.906867 CCTGTTCATTCATCATTTACTATTGGT 58.093 33.333 0.00 0.00 0.00 3.67
2319 3241 2.125106 GAGCCGTGCTACCAAGGG 60.125 66.667 0.00 0.00 39.88 3.95
2320 3242 4.410400 AGCCGTGCTACCAAGGGC 62.410 66.667 0.00 0.00 40.47 5.19
2321 3243 4.410400 GCCGTGCTACCAAGGGCT 62.410 66.667 0.10 0.00 40.47 5.19
2322 3244 3.026431 GCCGTGCTACCAAGGGCTA 62.026 63.158 0.10 0.00 40.47 3.93
2323 3245 1.144057 CCGTGCTACCAAGGGCTAG 59.856 63.158 0.00 0.00 37.01 3.42
2328 3250 1.353091 GCTACCAAGGGCTAGCCTAT 58.647 55.000 32.18 19.02 36.10 2.57
2341 3263 0.253044 AGCCTATGACCGTGCATGTT 59.747 50.000 4.96 0.00 0.00 2.71
2343 3265 1.299541 CCTATGACCGTGCATGTTCC 58.700 55.000 4.96 0.00 0.00 3.62
2344 3266 1.299541 CTATGACCGTGCATGTTCCC 58.700 55.000 4.96 0.00 0.00 3.97
2345 3267 0.107410 TATGACCGTGCATGTTCCCC 60.107 55.000 4.96 0.00 0.00 4.81
2346 3268 1.852157 ATGACCGTGCATGTTCCCCT 61.852 55.000 4.96 0.00 0.00 4.79
2359 3281 0.541863 TTCCCCTCCTCGCTGAAATC 59.458 55.000 0.00 0.00 0.00 2.17
2417 3339 6.934048 AGTAGGAGTATTCGTAACAGTACC 57.066 41.667 0.00 0.00 0.00 3.34
2460 3382 3.307782 CGACAAACACTAGACGGTTGTTT 59.692 43.478 17.41 10.87 33.61 2.83
2506 3428 2.622942 TCACATGGCTGAAACACTTTCC 59.377 45.455 0.00 0.00 38.90 3.13
2515 3437 0.555769 AAACACTTTCCTGCTCCCCA 59.444 50.000 0.00 0.00 0.00 4.96
2543 3465 2.402564 CCATGTAGGATCCACACCTCT 58.597 52.381 15.82 0.00 41.22 3.69
2558 3493 1.053264 CCTCTGTCCCATGCCTAGCT 61.053 60.000 0.00 0.00 0.00 3.32
2572 3507 1.069204 CCTAGCTCGAGCAGGCATTAA 59.931 52.381 36.87 11.86 45.16 1.40
2681 3619 5.468072 CCATCAACAGATACATAGCTCCAAC 59.532 44.000 0.00 0.00 0.00 3.77
2703 3641 1.726248 CACGTCGCTGTTCATCATCAA 59.274 47.619 0.00 0.00 0.00 2.57
2734 3672 2.706190 AGTCCACTTGTTAGCTTGGAGT 59.294 45.455 2.72 3.74 0.00 3.85
2769 3707 0.394216 TCAGGTTCCCGCAATGATGG 60.394 55.000 0.00 0.00 0.00 3.51
3097 4180 1.893801 ACGACTTGATCCTTTCTCGGT 59.106 47.619 0.00 0.00 0.00 4.69
3104 4187 0.831307 ATCCTTTCTCGGTGGTAGGC 59.169 55.000 0.00 0.00 0.00 3.93
3107 4190 0.813184 CTTTCTCGGTGGTAGGCGTA 59.187 55.000 0.00 0.00 0.00 4.42
3199 4284 0.028242 CGGAGTCTCGTCAATCCTCG 59.972 60.000 0.00 0.00 0.00 4.63
3219 4304 1.945387 CCCTGTCACCATCAATCTCG 58.055 55.000 0.00 0.00 0.00 4.04
3295 4380 2.607750 TCCCCTGGCAGTCTGACC 60.608 66.667 14.43 4.84 0.00 4.02
3296 4381 3.721706 CCCCTGGCAGTCTGACCC 61.722 72.222 14.43 0.00 0.00 4.46
3297 4382 2.608988 CCCTGGCAGTCTGACCCT 60.609 66.667 14.43 0.00 0.00 4.34
3298 4383 2.667418 CCTGGCAGTCTGACCCTG 59.333 66.667 14.43 3.86 0.00 4.45
3299 4384 2.219875 CCTGGCAGTCTGACCCTGT 61.220 63.158 14.43 0.00 32.41 4.00
3300 4385 1.294780 CTGGCAGTCTGACCCTGTC 59.705 63.158 6.28 0.00 35.12 3.51
3309 4394 3.249189 GACCCTGTCCCTGCCACA 61.249 66.667 0.00 0.00 0.00 4.17
3443 4528 1.200252 CTGAGATCAGTATACGGCCGG 59.800 57.143 31.76 10.66 39.09 6.13
3522 4612 6.103997 CACCTTTTAATTTGCTGCTGATGAT 58.896 36.000 0.00 0.00 0.00 2.45
3552 4642 2.494445 CGCGCCAGACCAGACATA 59.506 61.111 0.00 0.00 0.00 2.29
3653 4746 3.391736 GGTAGGGCCGTTAATCCAC 57.608 57.895 1.81 0.00 0.00 4.02
3654 4747 0.542805 GGTAGGGCCGTTAATCCACA 59.457 55.000 1.81 0.00 0.00 4.17
3655 4748 1.660167 GTAGGGCCGTTAATCCACAC 58.340 55.000 1.81 0.00 0.00 3.82
3656 4749 0.176219 TAGGGCCGTTAATCCACACG 59.824 55.000 1.81 0.00 36.12 4.49
3657 4750 2.757056 GGGCCGTTAATCCACACGC 61.757 63.158 0.00 0.00 34.98 5.34
3658 4751 2.036006 GGCCGTTAATCCACACGCA 61.036 57.895 0.00 0.00 34.98 5.24
3659 4752 1.373590 GGCCGTTAATCCACACGCAT 61.374 55.000 0.00 0.00 34.98 4.73
3660 4753 1.292061 GCCGTTAATCCACACGCATA 58.708 50.000 0.00 0.00 34.98 3.14
3661 4754 1.004292 GCCGTTAATCCACACGCATAC 60.004 52.381 0.00 0.00 34.98 2.39
3662 4755 1.595794 CCGTTAATCCACACGCATACC 59.404 52.381 0.00 0.00 34.98 2.73
3663 4756 1.256895 CGTTAATCCACACGCATACCG 59.743 52.381 0.00 0.00 44.21 4.02
3664 4757 1.004292 GTTAATCCACACGCATACCGC 60.004 52.381 0.00 0.00 41.76 5.68
3665 4758 0.531090 TAATCCACACGCATACCGCC 60.531 55.000 0.00 0.00 41.76 6.13
3666 4759 2.529454 AATCCACACGCATACCGCCA 62.529 55.000 0.00 0.00 41.76 5.69
3667 4760 2.923426 ATCCACACGCATACCGCCAG 62.923 60.000 0.00 0.00 41.76 4.85
3668 4761 3.864686 CACACGCATACCGCCAGC 61.865 66.667 0.00 0.00 41.76 4.85
3669 4762 4.082523 ACACGCATACCGCCAGCT 62.083 61.111 0.00 0.00 41.76 4.24
3670 4763 2.106131 CACGCATACCGCCAGCTA 59.894 61.111 0.00 0.00 41.76 3.32
3671 4764 1.520564 CACGCATACCGCCAGCTAA 60.521 57.895 0.00 0.00 41.76 3.09
3781 4874 2.734723 CGCTGGTGGTGTCACTCG 60.735 66.667 2.35 0.00 43.17 4.18
3796 4889 1.153127 CTCGCTCCCTCGTAGACCT 60.153 63.158 0.00 0.00 0.00 3.85
3831 4924 3.436577 ACGGAGGAGAGAACTAGACAA 57.563 47.619 0.00 0.00 0.00 3.18
3834 4927 4.011023 CGGAGGAGAGAACTAGACAAGAA 58.989 47.826 0.00 0.00 0.00 2.52
3842 4935 5.046950 AGAGAACTAGACAAGAAATCGCCTT 60.047 40.000 0.00 0.00 0.00 4.35
3864 5388 1.529826 CGCTCTATTTTCCGTGCAAGC 60.530 52.381 0.00 0.00 0.00 4.01
3878 5425 0.463474 GCAAGCCATCTGGAGGACTC 60.463 60.000 0.00 0.00 37.39 3.36
3940 5487 3.517296 TCACCTCACTCTCTTCTGTCT 57.483 47.619 0.00 0.00 0.00 3.41
4007 5554 3.718434 TGCTCCTAGAATTCCACATGGAT 59.282 43.478 0.34 0.00 44.98 3.41
4061 5608 4.504916 CTGGCCTGGTCTCGAGCG 62.505 72.222 7.81 0.00 0.00 5.03
4077 5624 2.959372 CGCACTGTCGTGAGGGTA 59.041 61.111 0.00 0.00 43.97 3.69
4079 5626 0.736636 CGCACTGTCGTGAGGGTATA 59.263 55.000 0.00 0.00 43.97 1.47
4080 5627 1.268589 CGCACTGTCGTGAGGGTATAG 60.269 57.143 0.00 0.00 43.97 1.31
4081 5628 1.749634 GCACTGTCGTGAGGGTATAGT 59.250 52.381 0.00 0.00 43.97 2.12
4082 5629 2.947652 GCACTGTCGTGAGGGTATAGTA 59.052 50.000 0.00 0.00 43.97 1.82
4083 5630 3.003482 GCACTGTCGTGAGGGTATAGTAG 59.997 52.174 0.00 0.00 43.97 2.57
4085 5632 3.201708 ACTGTCGTGAGGGTATAGTAGGT 59.798 47.826 0.00 0.00 0.00 3.08
4086 5633 4.410228 ACTGTCGTGAGGGTATAGTAGGTA 59.590 45.833 0.00 0.00 0.00 3.08
4087 5634 5.104360 ACTGTCGTGAGGGTATAGTAGGTAA 60.104 44.000 0.00 0.00 0.00 2.85
4088 5635 5.945310 TGTCGTGAGGGTATAGTAGGTAAT 58.055 41.667 0.00 0.00 0.00 1.89
4111 5658 2.860628 GCGGCGTTGTCTCATAGCG 61.861 63.158 9.37 0.00 0.00 4.26
4127 5674 0.107945 AGCGAGTTCTTCATCAGCCC 60.108 55.000 0.00 0.00 0.00 5.19
4161 5708 3.548268 GCGCAGTAGCTTTCTTACTGTAG 59.452 47.826 13.66 9.89 42.18 2.74
4168 5715 8.224437 CAGTAGCTTTCTTACTGTAGCTTTTTC 58.776 37.037 7.28 0.00 40.91 2.29
4169 5716 8.151596 AGTAGCTTTCTTACTGTAGCTTTTTCT 58.848 33.333 7.28 0.82 40.91 2.52
4226 5778 9.778741 AAAAATCTCCTTTTATGGGAAGTTTTC 57.221 29.630 0.00 0.00 36.01 2.29
4258 5811 9.833182 ACGTTTTTGTTTGAAAAATAGCAAAAT 57.167 22.222 4.83 0.00 36.26 1.82
4293 5846 0.586319 ACAACATGTCCGCAAAGTCG 59.414 50.000 0.00 0.00 0.00 4.18
4413 5966 2.116736 CTCCTCTGCGAGCTAGCGAG 62.117 65.000 23.32 23.32 40.67 5.03
4461 6014 3.009723 CGCCACAAATAGGTGTTGAGAT 58.990 45.455 0.00 0.00 37.06 2.75
4573 6126 3.940852 TCCATTTTGTGTCATCATCTCCG 59.059 43.478 0.00 0.00 0.00 4.63
4637 6190 1.896660 GGCACGCCAACCTCTCAAA 60.897 57.895 2.36 0.00 35.81 2.69
4652 6205 3.459145 TCTCAAACACGTCGGATGAAAA 58.541 40.909 3.82 0.00 0.00 2.29
4654 6207 2.288458 TCAAACACGTCGGATGAAAACC 59.712 45.455 3.82 0.00 0.00 3.27
4655 6208 1.956297 AACACGTCGGATGAAAACCA 58.044 45.000 3.82 0.00 0.00 3.67
4679 6232 7.415541 CCATTGTGAGTTTATGGTCAACTATGG 60.416 40.741 0.00 0.00 34.49 2.74
4703 6256 7.511028 TGGGGGTTACTTGAGAAAACAATATTT 59.489 33.333 0.00 0.00 0.00 1.40
4704 6257 8.033038 GGGGGTTACTTGAGAAAACAATATTTC 58.967 37.037 0.00 0.00 39.16 2.17
4743 6296 8.710551 CAGAAATCTGATCTATACATCAACTGC 58.289 37.037 4.37 0.00 46.59 4.40
4745 6298 5.126396 TCTGATCTATACATCAACTGCCG 57.874 43.478 0.00 0.00 32.24 5.69
4835 6389 1.253100 TTCACCGGAAATCCAAAGGC 58.747 50.000 9.46 0.00 35.14 4.35
4950 6516 1.028905 GAGAGCAGCACGTAGGATCT 58.971 55.000 0.00 1.35 0.00 2.75
4980 6546 0.110373 CACACGATCACAGACGACGA 60.110 55.000 0.00 0.00 0.00 4.20
5029 6595 5.420409 GAAGACCAACACTAATCGAATCCT 58.580 41.667 0.00 0.00 0.00 3.24
5168 6736 2.886523 TGCCTTCTTGAATTGGACACAG 59.113 45.455 0.00 0.00 0.00 3.66
5181 6749 0.963962 GACACAGACCCTAACCGACA 59.036 55.000 0.00 0.00 0.00 4.35
5182 6750 1.342174 GACACAGACCCTAACCGACAA 59.658 52.381 0.00 0.00 0.00 3.18
5208 6777 3.354467 ACACACCTAAAAACGGACCAAA 58.646 40.909 0.00 0.00 0.00 3.28
5218 6787 2.851045 GGACCAAAAGCCCTCCCA 59.149 61.111 0.00 0.00 0.00 4.37
5252 6821 2.505407 TGGTACAACAGATCTCCATGGG 59.495 50.000 13.02 2.57 31.92 4.00
5313 6882 2.134933 CGGGAGGTAGGAAGCCCTC 61.135 68.421 0.00 0.00 45.44 4.30
5351 6920 4.100963 GCCTTTCTTTGGAAGGAGGAAAAA 59.899 41.667 8.72 0.00 35.54 1.94
5421 6991 3.052036 GTTCGTGTTGCTAGTAAACGGA 58.948 45.455 19.50 13.18 35.08 4.69
5422 6992 2.937591 TCGTGTTGCTAGTAAACGGAG 58.062 47.619 19.50 9.23 35.08 4.63
5424 6994 3.501828 TCGTGTTGCTAGTAAACGGAGTA 59.498 43.478 19.50 6.15 45.00 2.59
5425 6995 3.605486 CGTGTTGCTAGTAAACGGAGTAC 59.395 47.826 15.21 0.00 45.00 2.73
5426 6996 4.549458 GTGTTGCTAGTAAACGGAGTACA 58.451 43.478 0.00 0.00 45.00 2.90
5430 7000 7.008992 GTGTTGCTAGTAAACGGAGTACATAAG 59.991 40.741 0.00 0.00 45.00 1.73
5432 7002 7.395190 TGCTAGTAAACGGAGTACATAAGAA 57.605 36.000 0.00 0.00 45.00 2.52
5433 7003 8.004087 TGCTAGTAAACGGAGTACATAAGAAT 57.996 34.615 0.00 0.00 45.00 2.40
5434 7004 8.472413 TGCTAGTAAACGGAGTACATAAGAATT 58.528 33.333 0.00 0.00 45.00 2.17
5435 7005 9.956720 GCTAGTAAACGGAGTACATAAGAATTA 57.043 33.333 0.00 0.00 45.00 1.40
5438 7008 8.419442 AGTAAACGGAGTACATAAGAATTAGGG 58.581 37.037 0.00 0.00 45.00 3.53
5439 7009 7.427989 AAACGGAGTACATAAGAATTAGGGA 57.572 36.000 0.00 0.00 45.00 4.20
5440 7010 6.651975 ACGGAGTACATAAGAATTAGGGAG 57.348 41.667 0.00 0.00 41.94 4.30
5441 7011 6.134754 ACGGAGTACATAAGAATTAGGGAGT 58.865 40.000 0.00 0.00 41.94 3.85
5442 7012 7.293073 ACGGAGTACATAAGAATTAGGGAGTA 58.707 38.462 0.00 0.00 41.94 2.59
5443 7013 7.230309 ACGGAGTACATAAGAATTAGGGAGTAC 59.770 40.741 0.00 0.00 41.94 2.73
5444 7014 7.309073 CGGAGTACATAAGAATTAGGGAGTACC 60.309 44.444 0.00 0.00 36.52 3.34
5493 7063 8.424274 AATTTGGTCTCATTCACTTTGAAAAC 57.576 30.769 0.00 0.00 40.12 2.43
5494 7064 6.522625 TTGGTCTCATTCACTTTGAAAACA 57.477 33.333 0.00 0.00 40.12 2.83
5495 7065 6.522625 TGGTCTCATTCACTTTGAAAACAA 57.477 33.333 0.00 0.00 40.12 2.83
5496 7066 6.563422 TGGTCTCATTCACTTTGAAAACAAG 58.437 36.000 0.00 0.00 40.12 3.16
5497 7067 6.376864 TGGTCTCATTCACTTTGAAAACAAGA 59.623 34.615 0.00 0.00 40.12 3.02
5498 7068 7.093988 TGGTCTCATTCACTTTGAAAACAAGAA 60.094 33.333 0.00 0.00 40.12 2.52
5499 7069 7.220875 GGTCTCATTCACTTTGAAAACAAGAAC 59.779 37.037 0.00 0.00 40.12 3.01
5500 7070 7.754924 GTCTCATTCACTTTGAAAACAAGAACA 59.245 33.333 0.00 0.00 40.12 3.18
5501 7071 8.303156 TCTCATTCACTTTGAAAACAAGAACAA 58.697 29.630 0.00 0.00 40.12 2.83
5502 7072 8.824159 TCATTCACTTTGAAAACAAGAACAAA 57.176 26.923 0.00 0.00 40.12 2.83
5503 7073 9.434420 TCATTCACTTTGAAAACAAGAACAAAT 57.566 25.926 0.00 0.00 40.12 2.32
5506 7076 9.698309 TTCACTTTGAAAACAAGAACAAATACA 57.302 25.926 0.00 0.00 32.71 2.29
5507 7077 9.698309 TCACTTTGAAAACAAGAACAAATACAA 57.302 25.926 0.00 0.00 33.01 2.41
5508 7078 9.739786 CACTTTGAAAACAAGAACAAATACAAC 57.260 29.630 0.00 0.00 33.01 3.32
5509 7079 8.931775 ACTTTGAAAACAAGAACAAATACAACC 58.068 29.630 0.00 0.00 33.01 3.77
5510 7080 7.835634 TTGAAAACAAGAACAAATACAACCC 57.164 32.000 0.00 0.00 0.00 4.11
5511 7081 6.936279 TGAAAACAAGAACAAATACAACCCA 58.064 32.000 0.00 0.00 0.00 4.51
5512 7082 6.814146 TGAAAACAAGAACAAATACAACCCAC 59.186 34.615 0.00 0.00 0.00 4.61
5513 7083 4.561735 ACAAGAACAAATACAACCCACG 57.438 40.909 0.00 0.00 0.00 4.94
5514 7084 3.949113 ACAAGAACAAATACAACCCACGT 59.051 39.130 0.00 0.00 0.00 4.49
5515 7085 4.035909 ACAAGAACAAATACAACCCACGTC 59.964 41.667 0.00 0.00 0.00 4.34
5516 7086 3.811083 AGAACAAATACAACCCACGTCA 58.189 40.909 0.00 0.00 0.00 4.35
5517 7087 3.813166 AGAACAAATACAACCCACGTCAG 59.187 43.478 0.00 0.00 0.00 3.51
5518 7088 1.877443 ACAAATACAACCCACGTCAGC 59.123 47.619 0.00 0.00 0.00 4.26
5519 7089 1.876799 CAAATACAACCCACGTCAGCA 59.123 47.619 0.00 0.00 0.00 4.41
5520 7090 1.519408 AATACAACCCACGTCAGCAC 58.481 50.000 0.00 0.00 0.00 4.40
5521 7091 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
5522 7092 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
5523 7093 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
5524 7094 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
5525 7095 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
5526 7096 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
5527 7097 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
5528 7098 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
5529 7099 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
5530 7100 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
5531 7101 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
5532 7102 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
5533 7103 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
5534 7104 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
5535 7105 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
5536 7106 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
5537 7107 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
5538 7108 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
5539 7109 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
5540 7110 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
5541 7111 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
5542 7112 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
5543 7113 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
5544 7114 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
5545 7115 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
5546 7116 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
5547 7117 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
5548 7118 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
5549 7119 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
5550 7120 6.404403 GCATCTTATAGCATCACATCCAATGG 60.404 42.308 0.00 0.00 33.60 3.16
5551 7121 5.005740 TCTTATAGCATCACATCCAATGGC 58.994 41.667 0.00 0.00 33.60 4.40
5552 7122 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
5553 7123 4.645863 ATAGCATCACATCCAATGGCTA 57.354 40.909 0.00 0.00 33.60 3.93
5554 7124 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
5555 7125 4.645863 AGCATCACATCCAATGGCTATA 57.354 40.909 0.00 0.00 33.60 1.31
5556 7126 4.989277 AGCATCACATCCAATGGCTATAA 58.011 39.130 0.00 0.00 33.60 0.98
5557 7127 5.387788 AGCATCACATCCAATGGCTATAAA 58.612 37.500 0.00 0.00 33.60 1.40
5558 7128 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
5559 7129 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
5560 7130 6.684686 CATCACATCCAATGGCTATAAAAGG 58.315 40.000 0.00 0.00 33.60 3.11
5561 7131 5.765510 TCACATCCAATGGCTATAAAAGGT 58.234 37.500 0.00 0.00 33.60 3.50
5562 7132 5.593909 TCACATCCAATGGCTATAAAAGGTG 59.406 40.000 0.00 0.00 33.60 4.00
5563 7133 5.593909 CACATCCAATGGCTATAAAAGGTGA 59.406 40.000 0.00 0.00 33.60 4.02
5564 7134 6.096705 CACATCCAATGGCTATAAAAGGTGAA 59.903 38.462 0.00 0.00 33.60 3.18
5565 7135 6.840705 ACATCCAATGGCTATAAAAGGTGAAT 59.159 34.615 0.00 0.00 33.60 2.57
5566 7136 6.713762 TCCAATGGCTATAAAAGGTGAATG 57.286 37.500 0.00 0.00 0.00 2.67
5567 7137 6.430864 TCCAATGGCTATAAAAGGTGAATGA 58.569 36.000 0.00 0.00 0.00 2.57
5568 7138 6.547141 TCCAATGGCTATAAAAGGTGAATGAG 59.453 38.462 0.00 0.00 0.00 2.90
5569 7139 6.547141 CCAATGGCTATAAAAGGTGAATGAGA 59.453 38.462 0.00 0.00 0.00 3.27
5570 7140 7.420800 CAATGGCTATAAAAGGTGAATGAGAC 58.579 38.462 0.00 0.00 0.00 3.36
5571 7141 5.437060 TGGCTATAAAAGGTGAATGAGACC 58.563 41.667 0.00 0.00 0.00 3.85
5572 7142 5.045213 TGGCTATAAAAGGTGAATGAGACCA 60.045 40.000 0.00 0.00 35.76 4.02
5573 7143 5.885912 GGCTATAAAAGGTGAATGAGACCAA 59.114 40.000 0.00 0.00 35.76 3.67
5574 7144 6.377146 GGCTATAAAAGGTGAATGAGACCAAA 59.623 38.462 0.00 0.00 35.76 3.28
5575 7145 7.068716 GGCTATAAAAGGTGAATGAGACCAAAT 59.931 37.037 0.00 0.00 35.76 2.32
5576 7146 8.470002 GCTATAAAAGGTGAATGAGACCAAATT 58.530 33.333 0.00 0.00 35.76 1.82
5582 7152 9.927081 AAAGGTGAATGAGACCAAATTATATCT 57.073 29.630 0.00 0.00 35.76 1.98
5583 7153 9.566432 AAGGTGAATGAGACCAAATTATATCTC 57.434 33.333 0.00 6.03 38.46 2.75
5662 7241 8.627403 CCTGCATCATCTATTTTTATGTGAAGT 58.373 33.333 0.00 0.00 0.00 3.01
5724 7304 7.244166 TGTTTAATGTTCGTTTAGGTTTCGA 57.756 32.000 0.00 0.00 0.00 3.71
5745 7325 4.201910 CGATTATGTCTTTTTCCACGCCAT 60.202 41.667 0.00 0.00 0.00 4.40
5807 7387 0.320334 TTGCATGTCATCGGTCACGT 60.320 50.000 0.00 0.00 41.85 4.49
5855 7459 2.478370 CCAAATGTAGTTGCATGCTCCG 60.478 50.000 20.33 0.00 0.00 4.63
5868 7472 2.279517 CTCCGCCGACTATGTGCC 60.280 66.667 0.00 0.00 0.00 5.01
6373 7982 0.179171 CGATCGAGCGCCGGTTATAT 60.179 55.000 11.25 4.26 39.14 0.86
6576 8803 0.447801 GCGGTTGTTGAGCTGGTATG 59.552 55.000 0.00 0.00 0.00 2.39
6596 8823 6.714810 GGTATGCATAGGTTTTGTCCATCATA 59.285 38.462 6.67 0.00 0.00 2.15
6601 8828 6.073765 GCATAGGTTTTGTCCATCATAGTACG 60.074 42.308 0.00 0.00 0.00 3.67
6614 8841 1.237533 TAGTACGCCGTGTCAACTCA 58.762 50.000 0.00 0.00 0.00 3.41
6635 8862 4.523173 TCACATCCTTACGACTGTTTCTCT 59.477 41.667 0.00 0.00 0.00 3.10
6636 8863 4.623167 CACATCCTTACGACTGTTTCTCTG 59.377 45.833 0.00 0.00 0.00 3.35
6647 8879 2.670414 CTGTTTCTCTGAAGGACGATGC 59.330 50.000 0.00 0.00 0.00 3.91
6653 8885 1.066858 TCTGAAGGACGATGCCTGTTC 60.067 52.381 0.00 0.00 38.58 3.18
6689 8921 5.066375 TCTCAACTTTCACCATGAAGTGTTG 59.934 40.000 20.93 20.93 44.35 3.33
6748 9002 1.271102 AGGTGACTCTTCTTGAGCGAC 59.729 52.381 0.00 0.00 46.41 5.19
6749 9003 1.271102 GGTGACTCTTCTTGAGCGACT 59.729 52.381 0.00 0.00 46.41 4.18
6750 9004 2.288518 GGTGACTCTTCTTGAGCGACTT 60.289 50.000 0.00 0.00 46.41 3.01
6751 9005 2.983803 GTGACTCTTCTTGAGCGACTTC 59.016 50.000 0.00 0.00 46.41 3.01
6752 9006 2.887783 TGACTCTTCTTGAGCGACTTCT 59.112 45.455 0.00 0.00 46.41 2.85
6753 9007 4.072839 TGACTCTTCTTGAGCGACTTCTA 58.927 43.478 0.00 0.00 46.41 2.10
6754 9008 4.083217 TGACTCTTCTTGAGCGACTTCTAC 60.083 45.833 0.00 0.00 46.41 2.59
6755 9009 3.120130 ACTCTTCTTGAGCGACTTCTACG 60.120 47.826 0.00 0.00 46.41 3.51
6856 9114 7.516627 GCAAGTTTGTGCAGTATTAACCTTTTG 60.517 37.037 0.00 0.00 44.29 2.44
6883 9141 2.029918 GCAATGGAATATTCTTCGGGCC 60.030 50.000 14.95 0.00 0.00 5.80
6895 9153 1.892474 CTTCGGGCCCAAAATTTCTGA 59.108 47.619 24.92 4.05 0.00 3.27
6896 9154 2.002505 TCGGGCCCAAAATTTCTGAA 57.997 45.000 24.92 0.00 0.00 3.02
6897 9155 2.320781 TCGGGCCCAAAATTTCTGAAA 58.679 42.857 24.92 5.15 0.00 2.69
6898 9156 2.036604 TCGGGCCCAAAATTTCTGAAAC 59.963 45.455 24.92 0.00 0.00 2.78
6899 9157 2.412870 GGGCCCAAAATTTCTGAAACG 58.587 47.619 19.95 0.00 0.00 3.60
6900 9158 2.412870 GGCCCAAAATTTCTGAAACGG 58.587 47.619 4.73 4.19 0.00 4.44
6901 9159 2.036604 GGCCCAAAATTTCTGAAACGGA 59.963 45.455 4.73 0.00 0.00 4.69
6902 9160 3.493524 GGCCCAAAATTTCTGAAACGGAA 60.494 43.478 4.73 0.00 0.00 4.30
6903 9161 4.123506 GCCCAAAATTTCTGAAACGGAAA 58.876 39.130 4.73 7.96 41.98 3.13
6905 9163 5.107104 GCCCAAAATTTCTGAAACGGAAATC 60.107 40.000 15.70 3.07 45.29 2.17
6906 9164 5.988561 CCCAAAATTTCTGAAACGGAAATCA 59.011 36.000 15.70 0.00 45.29 2.57
6907 9165 6.146021 CCCAAAATTTCTGAAACGGAAATCAG 59.854 38.462 15.70 10.20 45.29 2.90
6908 9166 6.922957 CCAAAATTTCTGAAACGGAAATCAGA 59.077 34.615 15.70 1.55 45.29 3.27
6993 9274 2.616969 TGCTGAGGCAAAACGAGAC 58.383 52.632 0.00 0.00 46.36 3.36
7021 9302 1.589803 TCACTCACTCACTCGTTCGA 58.410 50.000 0.00 0.00 0.00 3.71
7026 9307 3.167425 CTCACTCACTCGTTCGATTCAG 58.833 50.000 0.00 0.00 0.00 3.02
7071 9352 3.845259 GTGGCCGATGCTCCCGTA 61.845 66.667 0.00 0.00 37.74 4.02
7097 9378 4.218578 CCAGCATCGCTCGCTCCT 62.219 66.667 0.00 0.00 37.72 3.69
7098 9379 2.657944 CAGCATCGCTCGCTCCTC 60.658 66.667 0.00 0.00 37.72 3.71
7099 9380 2.832661 AGCATCGCTCGCTCCTCT 60.833 61.111 0.00 0.00 33.35 3.69
7100 9381 2.657944 GCATCGCTCGCTCCTCTG 60.658 66.667 0.00 0.00 0.00 3.35
7185 9467 2.103736 GCCGGGCGAGTAGTACAC 59.896 66.667 1.81 0.00 0.00 2.90
7186 9468 2.803479 CCGGGCGAGTAGTACACC 59.197 66.667 2.52 0.91 0.00 4.16
7187 9469 2.048023 CCGGGCGAGTAGTACACCA 61.048 63.158 2.52 0.00 0.00 4.17
7188 9470 1.389609 CCGGGCGAGTAGTACACCAT 61.390 60.000 2.52 0.00 0.00 3.55
7189 9471 0.248907 CGGGCGAGTAGTACACCATG 60.249 60.000 2.52 0.00 0.00 3.66
7190 9472 0.822164 GGGCGAGTAGTACACCATGT 59.178 55.000 2.52 0.00 0.00 3.21
7191 9473 1.470979 GGGCGAGTAGTACACCATGTG 60.471 57.143 2.52 0.00 39.75 3.21
7192 9474 1.470979 GGCGAGTAGTACACCATGTGG 60.471 57.143 2.52 0.00 37.94 4.17
7193 9475 1.922570 CGAGTAGTACACCATGTGGC 58.077 55.000 2.52 0.00 37.94 5.01
7194 9476 1.470979 CGAGTAGTACACCATGTGGCC 60.471 57.143 2.52 0.00 37.94 5.36
7195 9477 0.909623 AGTAGTACACCATGTGGCCC 59.090 55.000 0.00 0.00 37.94 5.80
7196 9478 0.461339 GTAGTACACCATGTGGCCCG 60.461 60.000 0.00 0.00 37.94 6.13
7197 9479 2.246761 TAGTACACCATGTGGCCCGC 62.247 60.000 0.00 0.00 37.94 6.13
7198 9480 4.418328 TACACCATGTGGCCCGCC 62.418 66.667 0.00 0.00 37.94 6.13
7200 9482 4.108299 CACCATGTGGCCCGCCTA 62.108 66.667 7.35 0.00 39.32 3.93
7276 9561 3.372060 TCGATAGTTACAGCTTGCATCG 58.628 45.455 0.00 0.00 36.14 3.84
7280 9565 2.555199 AGTTACAGCTTGCATCGATCC 58.445 47.619 0.00 0.00 0.00 3.36
7297 9582 1.198094 TCCATCGAGCTGGTTCCCAA 61.198 55.000 5.00 0.00 37.57 4.12
7326 12076 3.181497 CGGGAATCTGCATTTCGTTCAAT 60.181 43.478 0.00 0.00 0.00 2.57
7346 12096 7.034685 TCAATCCATTTGCATAACTCATCAG 57.965 36.000 0.00 0.00 35.16 2.90
7356 12106 9.967346 TTTGCATAACTCATCAGTACTAGTATC 57.033 33.333 5.75 0.38 30.14 2.24
7364 12114 7.041030 ACTCATCAGTACTAGTATCACGGAATG 60.041 40.741 5.75 3.72 0.00 2.67
7373 12123 7.327975 ACTAGTATCACGGAATGATTTTGTCA 58.672 34.615 0.00 0.00 46.54 3.58
7378 12128 7.585286 ATCACGGAATGATTTTGTCAATTTG 57.415 32.000 0.00 0.00 46.54 2.32
7381 12131 7.871973 TCACGGAATGATTTTGTCAATTTGATT 59.128 29.630 1.78 0.00 40.97 2.57
7393 12143 8.883954 TTGTCAATTTGATTATTTCAGCAACA 57.116 26.923 1.78 0.00 35.27 3.33
7396 12146 9.749490 GTCAATTTGATTATTTCAGCAACAATG 57.251 29.630 1.78 0.00 35.27 2.82
7432 12197 4.301072 ACAGTAATGCATTGGTAGGTGT 57.699 40.909 22.27 12.02 0.00 4.16
7461 12226 3.813166 CAGTGTTGGTAACTCGTGGATTT 59.187 43.478 0.00 0.00 37.61 2.17
7528 12297 2.745884 CGATCCGCTGGGCAAACA 60.746 61.111 0.00 0.00 0.00 2.83
7530 12299 2.361610 ATCCGCTGGGCAAACAGG 60.362 61.111 4.76 0.00 38.90 4.00
7536 12305 4.966787 TGGGCAAACAGGACCGGC 62.967 66.667 0.00 0.00 39.59 6.13
7559 12328 2.185350 CTGGAGCAGTACAGGGCG 59.815 66.667 0.00 0.00 34.54 6.13
7712 12481 1.276250 CGTCTACTCGCGCTACCTC 59.724 63.158 5.56 0.00 0.00 3.85
7844 12613 1.153086 GCTGAGCTACATGGTGGGG 60.153 63.158 0.00 0.00 0.00 4.96
7916 12685 2.830285 GCACAAGGCGAACAACCGT 61.830 57.895 0.00 0.00 0.00 4.83
7944 12713 2.359850 GCATGCAGGGGTTCGACA 60.360 61.111 14.21 0.00 0.00 4.35
7953 12722 0.393820 GGGGTTCGACAACTGGTACA 59.606 55.000 0.00 0.00 32.50 2.90
7957 12726 1.121378 TTCGACAACTGGTACACCCA 58.879 50.000 0.00 0.00 42.51 4.51
7967 12736 4.690719 TACACCCACAAGCGGCCG 62.691 66.667 24.05 24.05 0.00 6.13
8118 12887 2.280797 GGCTGCACAACCTGTCGA 60.281 61.111 0.50 0.00 0.00 4.20
8123 12892 2.279851 CACAACCTGTCGACGGCA 60.280 61.111 19.31 0.59 0.00 5.69
8194 12963 5.220662 CGAAGTGTAGATAAAGGTGGCATTG 60.221 44.000 0.00 0.00 0.00 2.82
8281 13052 7.912056 TTTTGAAGTGTTCATATGAGAGAGG 57.088 36.000 5.39 0.00 39.84 3.69
8311 13082 7.568199 TTAGTGAAAGGAAAGAACAAAGGAG 57.432 36.000 0.00 0.00 0.00 3.69
8343 13117 2.969628 ACAATGAGGAGACCGATCAC 57.030 50.000 0.00 0.00 0.00 3.06
8412 13186 7.150640 CCTCAGAAAGCAAATTTAAAGAGCTT 58.849 34.615 14.96 14.96 46.49 3.74
8463 13237 8.770828 TCAGTCTTTTAAGTTCCTTAACGAATG 58.229 33.333 12.02 12.02 40.73 2.67
8465 13239 8.771766 AGTCTTTTAAGTTCCTTAACGAATGTC 58.228 33.333 0.00 0.00 40.73 3.06
8537 13323 5.441500 TGAGTGGAATTGACAAAACTACCA 58.558 37.500 0.00 0.00 0.00 3.25
8658 13444 2.918712 ATCGCAATAGAAGGACCAGG 57.081 50.000 0.00 0.00 0.00 4.45
8663 13449 3.947834 CGCAATAGAAGGACCAGGAAATT 59.052 43.478 0.00 0.00 0.00 1.82
8671 13457 1.287739 GGACCAGGAAATTGGATGGGA 59.712 52.381 0.00 0.00 40.87 4.37
8711 13500 5.045432 AGTTAATCGGTTTTCCCTGACCATA 60.045 40.000 0.00 0.00 35.63 2.74
8747 13536 4.083537 TGCTTTAAGATGTGCACCGTTAAG 60.084 41.667 15.69 11.04 0.00 1.85
8774 13563 2.032636 GTGTAAACGGCCCGCATATAAC 60.033 50.000 1.23 0.00 0.00 1.89
8790 13579 3.508845 ATAACGATTGGGGGATTGAGG 57.491 47.619 0.00 0.00 0.00 3.86
8798 13587 1.529309 GGGGATTGAGGTGCTCTCC 59.471 63.158 5.44 0.00 41.76 3.71
8844 13633 4.049640 TTTGCGCGGTGATTGGCC 62.050 61.111 8.83 0.00 0.00 5.36
8850 13640 3.727258 CGGTGATTGGCCAGGGGA 61.727 66.667 5.11 0.00 0.00 4.81
8974 13772 9.384682 CTTATTTTTCCATTCATGTTTTTGTGC 57.615 29.630 0.00 0.00 0.00 4.57
8975 13773 5.747951 TTTTCCATTCATGTTTTTGTGCC 57.252 34.783 0.00 0.00 0.00 5.01
8997 13795 9.914131 GTGCCTTTTCTCTCAAATATTTTAGTT 57.086 29.630 8.80 0.00 0.00 2.24
9128 13935 6.951062 TTGAGTGAATTCCATAACACAACA 57.049 33.333 2.27 0.00 35.97 3.33
9176 13983 9.672086 GTGTTTATAACTGCAAGAAATACAACA 57.328 29.630 0.00 0.00 37.43 3.33
9183 13990 5.048504 ACTGCAAGAAATACAACATGACTGG 60.049 40.000 0.00 0.00 37.43 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.589139 CGGTAAGAAAAAGAGGAAGTCGTAAT 59.411 38.462 0.00 0.00 0.00 1.89
3 4 4.304939 CGGTAAGAAAAAGAGGAAGTCGT 58.695 43.478 0.00 0.00 0.00 4.34
5 6 4.891260 TCCGGTAAGAAAAAGAGGAAGTC 58.109 43.478 0.00 0.00 0.00 3.01
6 7 4.803253 GCTCCGGTAAGAAAAAGAGGAAGT 60.803 45.833 0.00 0.00 0.00 3.01
7 8 3.685272 GCTCCGGTAAGAAAAAGAGGAAG 59.315 47.826 0.00 0.00 0.00 3.46
8 9 3.326880 AGCTCCGGTAAGAAAAAGAGGAA 59.673 43.478 0.00 0.00 0.00 3.36
9 10 2.904434 AGCTCCGGTAAGAAAAAGAGGA 59.096 45.455 0.00 0.00 0.00 3.71
10 11 3.336138 AGCTCCGGTAAGAAAAAGAGG 57.664 47.619 0.00 0.00 0.00 3.69
11 12 4.315803 TGAAGCTCCGGTAAGAAAAAGAG 58.684 43.478 0.00 0.00 0.00 2.85
12 13 4.345859 TGAAGCTCCGGTAAGAAAAAGA 57.654 40.909 0.00 0.00 0.00 2.52
13 14 5.220416 CGTATGAAGCTCCGGTAAGAAAAAG 60.220 44.000 0.00 0.00 0.00 2.27
14 15 4.628333 CGTATGAAGCTCCGGTAAGAAAAA 59.372 41.667 0.00 0.00 0.00 1.94
211 220 2.361789 GCTGGGGCGAGTATAAACAAA 58.638 47.619 0.00 0.00 0.00 2.83
367 376 0.178961 GTGGGGGAGGGGATTATTGC 60.179 60.000 0.00 0.00 0.00 3.56
392 401 3.871594 GTGAGCGACATTAATACTGGCTT 59.128 43.478 4.09 0.00 0.00 4.35
543 588 3.371063 GGGTGCCGACTGACGAGA 61.371 66.667 0.22 0.00 45.77 4.04
585 632 0.033642 TGCACCGATTTACGTGTCCA 59.966 50.000 0.00 0.00 40.78 4.02
659 706 1.366111 TACGTACCACCGCCGTCTAC 61.366 60.000 0.00 0.00 36.12 2.59
705 753 2.048222 TTTCCAGGTGCGCGAGAG 60.048 61.111 12.10 0.00 0.00 3.20
766 814 3.181520 GGTGTAAGCAACTGACGCTATTG 60.182 47.826 0.00 0.00 39.29 1.90
794 842 1.178276 GTCTGACTGTCTGATCCCGT 58.822 55.000 18.40 0.00 0.00 5.28
796 844 2.175202 AGTGTCTGACTGTCTGATCCC 58.825 52.381 18.40 10.49 31.75 3.85
835 883 6.733334 ACCCTTTCTTTCCTTTCTATCTCTCT 59.267 38.462 0.00 0.00 0.00 3.10
838 886 6.953101 AGACCCTTTCTTTCCTTTCTATCTC 58.047 40.000 0.00 0.00 0.00 2.75
839 887 6.069905 GGAGACCCTTTCTTTCCTTTCTATCT 60.070 42.308 0.00 0.00 33.22 1.98
840 888 6.116806 GGAGACCCTTTCTTTCCTTTCTATC 58.883 44.000 0.00 0.00 33.22 2.08
841 889 5.551977 TGGAGACCCTTTCTTTCCTTTCTAT 59.448 40.000 0.00 0.00 33.22 1.98
842 890 4.911522 TGGAGACCCTTTCTTTCCTTTCTA 59.088 41.667 0.00 0.00 33.22 2.10
902 950 0.670546 CGCGATCAAGGACCTTGTGT 60.671 55.000 29.23 20.56 41.66 3.72
910 958 1.745115 CAAAGCCCGCGATCAAGGA 60.745 57.895 8.23 0.00 0.00 3.36
955 1008 3.550431 ACGGCAGCAGTCACCACT 61.550 61.111 0.00 0.00 0.00 4.00
1146 1202 2.977178 CTCTTGGACAGCGCCTCT 59.023 61.111 2.29 0.00 0.00 3.69
1227 1283 2.203351 GTGATCCCCGAATGCCCC 60.203 66.667 0.00 0.00 0.00 5.80
1626 2066 1.153369 ACATCGTCCGCCATCAAGG 60.153 57.895 0.00 0.00 41.84 3.61
1651 2092 4.489771 CACCTGCGGGTCCCATCC 62.490 72.222 16.42 0.00 45.41 3.51
1860 2459 2.225019 CGTAGAGACACGTACCTGTTGT 59.775 50.000 0.00 0.00 37.16 3.32
1873 2472 4.164294 GTGATGTGTTACCACGTAGAGAC 58.836 47.826 0.00 0.00 44.92 3.36
1874 2473 3.192001 GGTGATGTGTTACCACGTAGAGA 59.808 47.826 0.00 0.00 44.92 3.10
1875 2474 3.508762 GGTGATGTGTTACCACGTAGAG 58.491 50.000 0.00 0.00 44.92 2.43
1900 2499 2.536997 ATACAGGTGGCTTGTCCCGC 62.537 60.000 0.00 0.00 34.62 6.13
1968 2831 1.563924 TGTCGTAGTTGCCCCTGTAT 58.436 50.000 0.00 0.00 0.00 2.29
2229 3100 8.906867 CCAATAGTAAATGATGAATGAACAGGT 58.093 33.333 0.00 0.00 0.00 4.00
2230 3101 8.906867 ACCAATAGTAAATGATGAATGAACAGG 58.093 33.333 0.00 0.00 0.00 4.00
2245 3116 9.525409 GCGAATTCTTCTAGTACCAATAGTAAA 57.475 33.333 3.52 0.00 31.05 2.01
2246 3117 8.910944 AGCGAATTCTTCTAGTACCAATAGTAA 58.089 33.333 3.52 0.00 31.05 2.24
2250 3121 8.255206 TGAAAGCGAATTCTTCTAGTACCAATA 58.745 33.333 3.52 0.00 0.00 1.90
2251 3122 7.103641 TGAAAGCGAATTCTTCTAGTACCAAT 58.896 34.615 3.52 0.00 0.00 3.16
2252 3123 6.460781 TGAAAGCGAATTCTTCTAGTACCAA 58.539 36.000 3.52 0.00 0.00 3.67
2253 3124 6.032956 TGAAAGCGAATTCTTCTAGTACCA 57.967 37.500 3.52 0.00 0.00 3.25
2254 3125 6.757010 TGATGAAAGCGAATTCTTCTAGTACC 59.243 38.462 3.52 0.00 35.57 3.34
2255 3126 7.757097 TGATGAAAGCGAATTCTTCTAGTAC 57.243 36.000 3.52 0.00 35.57 2.73
2256 3127 8.771920 TTTGATGAAAGCGAATTCTTCTAGTA 57.228 30.769 3.52 0.00 35.57 1.82
2257 3128 7.672983 TTTGATGAAAGCGAATTCTTCTAGT 57.327 32.000 3.52 0.00 35.57 2.57
2260 3131 9.565213 CTTAATTTGATGAAAGCGAATTCTTCT 57.435 29.630 3.52 0.00 42.31 2.85
2261 3132 9.346725 ACTTAATTTGATGAAAGCGAATTCTTC 57.653 29.630 3.52 1.61 42.31 2.87
2262 3133 9.696917 AACTTAATTTGATGAAAGCGAATTCTT 57.303 25.926 3.52 0.00 42.31 2.52
2263 3134 9.132521 CAACTTAATTTGATGAAAGCGAATTCT 57.867 29.630 3.52 0.00 42.31 2.40
2264 3135 8.375465 CCAACTTAATTTGATGAAAGCGAATTC 58.625 33.333 7.10 0.00 42.31 2.17
2273 3144 5.304101 ACCAGCACCAACTTAATTTGATGAA 59.696 36.000 4.15 0.00 0.00 2.57
2319 3241 0.034059 ATGCACGGTCATAGGCTAGC 59.966 55.000 6.04 6.04 0.00 3.42
2320 3242 1.069204 ACATGCACGGTCATAGGCTAG 59.931 52.381 0.00 0.00 0.00 3.42
2321 3243 1.119684 ACATGCACGGTCATAGGCTA 58.880 50.000 0.00 0.00 0.00 3.93
2322 3244 0.253044 AACATGCACGGTCATAGGCT 59.747 50.000 0.00 0.00 0.00 4.58
2323 3245 0.657840 GAACATGCACGGTCATAGGC 59.342 55.000 0.00 0.00 0.00 3.93
2328 3250 2.033448 GGGGAACATGCACGGTCA 59.967 61.111 0.00 0.00 0.00 4.02
2341 3263 0.617535 TGATTTCAGCGAGGAGGGGA 60.618 55.000 0.00 0.00 0.00 4.81
2343 3265 3.376218 CTGATTTCAGCGAGGAGGG 57.624 57.895 0.00 0.00 37.15 4.30
2359 3281 0.801067 GTTCGTGGCTAGGCGTACTG 60.801 60.000 12.19 2.67 0.00 2.74
2424 3346 0.460722 TTGTCGTCGTGGGAGTGAAA 59.539 50.000 0.00 0.00 0.00 2.69
2460 3382 7.182060 AGACATTAATTCCCCTTTCTTAAGCA 58.818 34.615 0.00 0.00 0.00 3.91
2506 3428 0.540365 TGGCTTCTTTTGGGGAGCAG 60.540 55.000 0.00 0.00 0.00 4.24
2515 3437 4.263905 TGTGGATCCTACATGGCTTCTTTT 60.264 41.667 14.23 0.00 35.26 2.27
2558 3493 2.173669 GCGCTTAATGCCTGCTCGA 61.174 57.895 0.00 0.00 38.78 4.04
2572 3507 1.855213 TTTTTGCATCTGAGCGCGCT 61.855 50.000 37.28 37.28 37.31 5.92
2602 3537 1.621317 TCGCAGGTGGAGTGTATGAAA 59.379 47.619 0.00 0.00 0.00 2.69
2662 3597 5.178797 GTGTGTTGGAGCTATGTATCTGTT 58.821 41.667 0.00 0.00 0.00 3.16
2681 3619 1.059692 GATGATGAACAGCGACGTGTG 59.940 52.381 0.00 0.00 0.00 3.82
2734 3672 2.291865 ACCTGATCTACTGACTGGCTCA 60.292 50.000 0.00 0.00 0.00 4.26
2798 3741 1.812922 CTCGGCCATGTGAGTGAGC 60.813 63.158 2.24 0.00 0.00 4.26
3034 4116 2.829458 GTAGAGAGGTCGCCGGCT 60.829 66.667 26.68 4.89 0.00 5.52
3097 4180 2.560542 TCCGTAAAAACTACGCCTACCA 59.439 45.455 0.00 0.00 39.38 3.25
3104 4187 4.152938 CCCTTTTCCTCCGTAAAAACTACG 59.847 45.833 0.00 0.00 40.30 3.51
3107 4190 4.442401 TCCCTTTTCCTCCGTAAAAACT 57.558 40.909 0.00 0.00 0.00 2.66
3219 4304 7.886711 GCGATCGTAATAATTCGTAATTGAGAC 59.113 37.037 17.81 0.00 34.24 3.36
3295 4380 4.729918 GGCTGTGGCAGGGACAGG 62.730 72.222 5.17 0.00 41.08 4.00
3296 4381 3.957586 TGGCTGTGGCAGGGACAG 61.958 66.667 0.00 0.00 43.22 3.51
3297 4382 4.269523 GTGGCTGTGGCAGGGACA 62.270 66.667 0.00 0.00 39.19 4.02
3298 4383 4.269523 TGTGGCTGTGGCAGGGAC 62.270 66.667 0.00 0.00 39.19 4.46
3299 4384 4.269523 GTGTGGCTGTGGCAGGGA 62.270 66.667 0.00 0.00 39.19 4.20
3329 4414 2.203070 ATGCCAGGCGTCCGATTC 60.203 61.111 7.03 0.00 0.00 2.52
3360 4445 2.520982 CCGGGATCCTGAGGCGTA 60.521 66.667 23.02 0.00 0.00 4.42
3366 4451 3.785859 GCAGCACCGGGATCCTGA 61.786 66.667 23.02 0.00 0.00 3.86
3443 4528 0.108424 CCAGCCAGAGGATATAGCGC 60.108 60.000 0.00 0.00 0.00 5.92
3586 4679 2.547634 CCAAATTTCCTGCGTTTTTGGG 59.452 45.455 5.10 0.00 41.56 4.12
3645 4738 1.292061 GCGGTATGCGTGTGGATTAA 58.708 50.000 0.00 0.00 0.00 1.40
3646 4739 2.980562 GCGGTATGCGTGTGGATTA 58.019 52.632 0.00 0.00 0.00 1.75
3647 4740 3.808036 GCGGTATGCGTGTGGATT 58.192 55.556 0.00 0.00 0.00 3.01
3656 4749 1.865340 GTTAGTTAGCTGGCGGTATGC 59.135 52.381 0.00 0.00 45.38 3.14
3657 4750 3.454371 AGTTAGTTAGCTGGCGGTATG 57.546 47.619 0.00 0.00 0.00 2.39
3658 4751 4.648307 AGTTAGTTAGTTAGCTGGCGGTAT 59.352 41.667 0.00 0.00 0.00 2.73
3659 4752 4.019174 AGTTAGTTAGTTAGCTGGCGGTA 58.981 43.478 0.00 0.00 0.00 4.02
3660 4753 2.830321 AGTTAGTTAGTTAGCTGGCGGT 59.170 45.455 0.00 0.00 0.00 5.68
3661 4754 3.521947 AGTTAGTTAGTTAGCTGGCGG 57.478 47.619 0.00 0.00 0.00 6.13
3662 4755 3.617263 CCAAGTTAGTTAGTTAGCTGGCG 59.383 47.826 0.00 0.00 0.00 5.69
3663 4756 4.576879 ACCAAGTTAGTTAGTTAGCTGGC 58.423 43.478 0.00 0.00 0.00 4.85
3664 4757 5.790593 TGACCAAGTTAGTTAGTTAGCTGG 58.209 41.667 0.00 0.00 0.00 4.85
3665 4758 6.369065 CCTTGACCAAGTTAGTTAGTTAGCTG 59.631 42.308 0.00 0.00 36.72 4.24
3666 4759 6.465084 CCTTGACCAAGTTAGTTAGTTAGCT 58.535 40.000 8.72 0.00 36.72 3.32
3667 4760 5.121925 GCCTTGACCAAGTTAGTTAGTTAGC 59.878 44.000 8.72 0.00 36.72 3.09
3668 4761 5.642491 GGCCTTGACCAAGTTAGTTAGTTAG 59.358 44.000 8.72 0.00 36.72 2.34
3669 4762 5.072058 TGGCCTTGACCAAGTTAGTTAGTTA 59.928 40.000 3.32 0.00 36.55 2.24
3670 4763 4.141344 TGGCCTTGACCAAGTTAGTTAGTT 60.141 41.667 3.32 0.00 36.55 2.24
3671 4764 3.393278 TGGCCTTGACCAAGTTAGTTAGT 59.607 43.478 3.32 0.00 36.55 2.24
3781 4874 1.076923 TGGAGGTCTACGAGGGAGC 60.077 63.158 0.00 0.00 0.00 4.70
3817 4910 4.801516 GGCGATTTCTTGTCTAGTTCTCTC 59.198 45.833 0.00 0.00 0.00 3.20
3842 4935 2.087501 TGCACGGAAAATAGAGCGAA 57.912 45.000 0.00 0.00 0.00 4.70
3864 5388 0.748367 TCGACGAGTCCTCCAGATGG 60.748 60.000 0.00 0.00 0.00 3.51
3940 5487 2.280797 GTGAAGTGCACGGCCAGA 60.281 61.111 12.01 0.00 37.83 3.86
4007 5554 1.536418 CCCTCTGTGGACCAGGACA 60.536 63.158 0.00 0.00 41.83 4.02
4052 5599 2.872001 CGACAGTGCGCTCGAGAC 60.872 66.667 18.75 7.86 31.24 3.36
4077 5624 2.029290 CGCCGCTTCCATTACCTACTAT 60.029 50.000 0.00 0.00 0.00 2.12
4079 5626 0.104304 CGCCGCTTCCATTACCTACT 59.896 55.000 0.00 0.00 0.00 2.57
4080 5627 0.179092 ACGCCGCTTCCATTACCTAC 60.179 55.000 0.00 0.00 0.00 3.18
4081 5628 0.538118 AACGCCGCTTCCATTACCTA 59.462 50.000 0.00 0.00 0.00 3.08
4082 5629 1.024579 CAACGCCGCTTCCATTACCT 61.025 55.000 0.00 0.00 0.00 3.08
4083 5630 1.303091 ACAACGCCGCTTCCATTACC 61.303 55.000 0.00 0.00 0.00 2.85
4085 5632 0.036765 AGACAACGCCGCTTCCATTA 60.037 50.000 0.00 0.00 0.00 1.90
4086 5633 1.298859 GAGACAACGCCGCTTCCATT 61.299 55.000 0.00 0.00 0.00 3.16
4087 5634 1.741770 GAGACAACGCCGCTTCCAT 60.742 57.895 0.00 0.00 0.00 3.41
4088 5635 2.357034 GAGACAACGCCGCTTCCA 60.357 61.111 0.00 0.00 0.00 3.53
4111 5658 1.280421 ACCAGGGCTGATGAAGAACTC 59.720 52.381 0.00 0.00 0.00 3.01
4127 5674 2.486636 TACTGCGCCGTGAAGACCAG 62.487 60.000 15.24 0.00 0.00 4.00
4161 5708 5.469084 TCCGGTAGAAGAAGAAAGAAAAAGC 59.531 40.000 0.00 0.00 0.00 3.51
4168 5715 3.760537 CTCGTCCGGTAGAAGAAGAAAG 58.239 50.000 0.00 0.00 32.26 2.62
4169 5716 2.094854 GCTCGTCCGGTAGAAGAAGAAA 60.095 50.000 0.00 0.00 32.26 2.52
4226 5778 9.419737 CTATTTTTCAAACAAAAACGTTGATGG 57.580 29.630 15.49 3.42 32.67 3.51
4413 5966 1.135859 ACGTTGATGGTCGAGTCGTAC 60.136 52.381 13.12 9.27 0.00 3.67
4529 6082 0.598065 GTCGGTTCCAATGCTTGCTT 59.402 50.000 0.00 0.00 0.00 3.91
4584 6137 1.134788 CGGACTTGGTGCTACTTAGGG 60.135 57.143 0.00 0.00 0.00 3.53
4598 6151 1.134220 TCACCTTGTCTTTGCGGACTT 60.134 47.619 6.01 0.00 37.16 3.01
4600 6153 0.868406 CTCACCTTGTCTTTGCGGAC 59.132 55.000 0.00 0.00 36.81 4.79
4628 6181 0.966920 ATCCGACGTGTTTGAGAGGT 59.033 50.000 0.00 0.00 0.00 3.85
4631 6184 2.804697 TTCATCCGACGTGTTTGAGA 57.195 45.000 0.00 0.00 0.00 3.27
4637 6190 2.178912 ATGGTTTTCATCCGACGTGT 57.821 45.000 0.00 0.00 0.00 4.49
4654 6207 7.415541 CCCATAGTTGACCATAAACTCACAATG 60.416 40.741 0.00 0.00 38.73 2.82
4655 6208 6.603201 CCCATAGTTGACCATAAACTCACAAT 59.397 38.462 0.00 0.00 38.73 2.71
4673 6226 5.073965 TGTTTTCTCAAGTAACCCCCATAGT 59.926 40.000 0.00 0.00 0.00 2.12
4679 6232 8.803235 AGAAATATTGTTTTCTCAAGTAACCCC 58.197 33.333 0.00 0.00 41.01 4.95
4713 6266 7.087007 TGATGTATAGATCAGATTTCTGTCGC 58.913 38.462 8.43 0.00 44.12 5.19
4714 6267 8.910666 GTTGATGTATAGATCAGATTTCTGTCG 58.089 37.037 11.94 0.00 44.12 4.35
4715 6268 9.979578 AGTTGATGTATAGATCAGATTTCTGTC 57.020 33.333 11.94 5.13 44.12 3.51
4717 6270 8.710551 GCAGTTGATGTATAGATCAGATTTCTG 58.289 37.037 11.94 14.98 45.08 3.02
4724 6277 4.683320 CACGGCAGTTGATGTATAGATCAG 59.317 45.833 11.94 3.51 33.86 2.90
4725 6278 4.501400 CCACGGCAGTTGATGTATAGATCA 60.501 45.833 8.43 8.43 0.00 2.92
4743 6296 3.283684 TTTTCGGTGCTGCCACGG 61.284 61.111 12.05 7.94 43.00 4.94
4745 6298 1.299089 GTGTTTTCGGTGCTGCCAC 60.299 57.895 0.00 0.00 41.32 5.01
4808 6362 5.880164 TGGATTTCCGGTGAATATAGTCA 57.120 39.130 0.00 0.00 39.43 3.41
4821 6375 3.063743 GCCCGCCTTTGGATTTCCG 62.064 63.158 0.00 0.00 39.43 4.30
4844 6398 2.819595 CCAATGAGGGGTGCGACG 60.820 66.667 0.00 0.00 0.00 5.12
4845 6399 1.450312 CTCCAATGAGGGGTGCGAC 60.450 63.158 0.00 0.00 38.24 5.19
4846 6400 2.989639 CTCCAATGAGGGGTGCGA 59.010 61.111 0.00 0.00 38.24 5.10
4847 6401 2.825836 GCTCCAATGAGGGGTGCG 60.826 66.667 0.00 0.00 41.40 5.34
4848 6402 2.440980 GGCTCCAATGAGGGGTGC 60.441 66.667 0.00 0.00 41.40 5.01
4850 6404 0.846693 GTATGGCTCCAATGAGGGGT 59.153 55.000 0.00 0.00 41.40 4.95
4943 6509 9.163899 GATCGTGTGTCTACATATTAGATCCTA 57.836 37.037 0.00 0.00 39.39 2.94
4950 6516 7.415229 GTCTGTGATCGTGTGTCTACATATTA 58.585 38.462 0.00 0.00 39.39 0.98
5029 6595 0.741927 TGTCTGTCGCGGATCTCGTA 60.742 55.000 6.13 0.00 41.72 3.43
5188 6757 4.356289 CTTTTGGTCCGTTTTTAGGTGTG 58.644 43.478 0.00 0.00 0.00 3.82
5199 6768 2.434774 GGAGGGCTTTTGGTCCGT 59.565 61.111 0.00 0.00 46.10 4.69
5200 6769 2.361230 GGGAGGGCTTTTGGTCCG 60.361 66.667 0.00 0.00 46.10 4.79
5295 6864 2.041819 AGGGCTTCCTACCTCCCG 60.042 66.667 0.00 0.00 43.46 5.14
5351 6920 5.348259 TCTTTTCTGGTTCCCCCTAAAAT 57.652 39.130 0.00 0.00 32.17 1.82
5421 6991 9.810870 CTAGGTACTCCCTAATTCTTATGTACT 57.189 37.037 0.00 0.00 45.40 2.73
5422 6992 9.804977 TCTAGGTACTCCCTAATTCTTATGTAC 57.195 37.037 0.00 0.00 45.40 2.90
5424 6994 9.145442 GTTCTAGGTACTCCCTAATTCTTATGT 57.855 37.037 0.00 0.00 45.40 2.29
5425 6995 9.369672 AGTTCTAGGTACTCCCTAATTCTTATG 57.630 37.037 0.00 0.00 45.40 1.90
5426 6996 9.590828 GAGTTCTAGGTACTCCCTAATTCTTAT 57.409 37.037 12.36 0.00 45.40 1.73
5430 7000 7.726738 AGATGAGTTCTAGGTACTCCCTAATTC 59.273 40.741 17.72 9.01 45.40 2.17
5432 7002 7.169287 AGATGAGTTCTAGGTACTCCCTAAT 57.831 40.000 17.72 8.74 45.40 1.73
5433 7003 6.593759 AGATGAGTTCTAGGTACTCCCTAA 57.406 41.667 17.72 5.36 45.40 2.69
5435 7005 7.475654 CATCTAGATGAGTTCTAGGTACTCCCT 60.476 44.444 25.78 16.34 44.99 4.20
5436 7006 6.657541 CATCTAGATGAGTTCTAGGTACTCCC 59.342 46.154 25.78 12.05 44.99 4.30
5437 7007 7.455058 TCATCTAGATGAGTTCTAGGTACTCC 58.545 42.308 27.93 8.04 44.99 3.85
5467 7037 9.528018 GTTTTCAAAGTGAATGAGACCAAATTA 57.472 29.630 0.00 0.00 36.11 1.40
5468 7038 8.040132 TGTTTTCAAAGTGAATGAGACCAAATT 58.960 29.630 0.00 0.00 36.11 1.82
5469 7039 7.555087 TGTTTTCAAAGTGAATGAGACCAAAT 58.445 30.769 0.00 0.00 36.11 2.32
5470 7040 6.929625 TGTTTTCAAAGTGAATGAGACCAAA 58.070 32.000 0.00 0.00 36.11 3.28
5471 7041 6.522625 TGTTTTCAAAGTGAATGAGACCAA 57.477 33.333 0.00 0.00 36.11 3.67
5472 7042 6.376864 TCTTGTTTTCAAAGTGAATGAGACCA 59.623 34.615 0.00 0.00 39.47 4.02
5473 7043 6.795399 TCTTGTTTTCAAAGTGAATGAGACC 58.205 36.000 0.00 0.00 39.47 3.85
5474 7044 7.754924 TGTTCTTGTTTTCAAAGTGAATGAGAC 59.245 33.333 0.00 0.00 39.47 3.36
5475 7045 7.825681 TGTTCTTGTTTTCAAAGTGAATGAGA 58.174 30.769 0.00 0.00 39.47 3.27
5476 7046 8.464770 TTGTTCTTGTTTTCAAAGTGAATGAG 57.535 30.769 0.00 0.00 39.47 2.90
5477 7047 8.824159 TTTGTTCTTGTTTTCAAAGTGAATGA 57.176 26.923 0.00 0.00 39.47 2.57
5480 7050 9.698309 TGTATTTGTTCTTGTTTTCAAAGTGAA 57.302 25.926 0.00 0.00 39.47 3.18
5481 7051 9.698309 TTGTATTTGTTCTTGTTTTCAAAGTGA 57.302 25.926 0.00 0.00 39.47 3.41
5482 7052 9.739786 GTTGTATTTGTTCTTGTTTTCAAAGTG 57.260 29.630 0.00 0.00 39.47 3.16
5483 7053 8.931775 GGTTGTATTTGTTCTTGTTTTCAAAGT 58.068 29.630 0.00 0.00 39.47 2.66
5484 7054 8.387354 GGGTTGTATTTGTTCTTGTTTTCAAAG 58.613 33.333 0.00 0.00 39.47 2.77
5485 7055 7.878127 TGGGTTGTATTTGTTCTTGTTTTCAAA 59.122 29.630 0.00 0.00 39.47 2.69
5486 7056 7.332182 GTGGGTTGTATTTGTTCTTGTTTTCAA 59.668 33.333 0.00 0.00 38.21 2.69
5487 7057 6.814146 GTGGGTTGTATTTGTTCTTGTTTTCA 59.186 34.615 0.00 0.00 0.00 2.69
5488 7058 6.020201 CGTGGGTTGTATTTGTTCTTGTTTTC 60.020 38.462 0.00 0.00 0.00 2.29
5489 7059 5.808030 CGTGGGTTGTATTTGTTCTTGTTTT 59.192 36.000 0.00 0.00 0.00 2.43
5490 7060 5.105675 ACGTGGGTTGTATTTGTTCTTGTTT 60.106 36.000 0.00 0.00 0.00 2.83
5491 7061 4.399934 ACGTGGGTTGTATTTGTTCTTGTT 59.600 37.500 0.00 0.00 0.00 2.83
5492 7062 3.949113 ACGTGGGTTGTATTTGTTCTTGT 59.051 39.130 0.00 0.00 0.00 3.16
5493 7063 4.035792 TGACGTGGGTTGTATTTGTTCTTG 59.964 41.667 0.00 0.00 0.00 3.02
5494 7064 4.200874 TGACGTGGGTTGTATTTGTTCTT 58.799 39.130 0.00 0.00 0.00 2.52
5495 7065 3.811083 TGACGTGGGTTGTATTTGTTCT 58.189 40.909 0.00 0.00 0.00 3.01
5496 7066 3.608474 GCTGACGTGGGTTGTATTTGTTC 60.608 47.826 0.00 0.00 0.00 3.18
5497 7067 2.292292 GCTGACGTGGGTTGTATTTGTT 59.708 45.455 0.00 0.00 0.00 2.83
5498 7068 1.877443 GCTGACGTGGGTTGTATTTGT 59.123 47.619 0.00 0.00 0.00 2.83
5499 7069 1.876799 TGCTGACGTGGGTTGTATTTG 59.123 47.619 0.00 0.00 0.00 2.32
5500 7070 1.877443 GTGCTGACGTGGGTTGTATTT 59.123 47.619 0.00 0.00 0.00 1.40
5501 7071 1.202710 TGTGCTGACGTGGGTTGTATT 60.203 47.619 0.00 0.00 0.00 1.89
5502 7072 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
5503 7073 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
5504 7074 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
5505 7075 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
5506 7076 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
5507 7077 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
5508 7078 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
5509 7079 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
5510 7080 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
5511 7081 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
5512 7082 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
5513 7083 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
5514 7084 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
5515 7085 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
5516 7086 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
5517 7087 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
5518 7088 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
5519 7089 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
5520 7090 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
5521 7091 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
5522 7092 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
5523 7093 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
5524 7094 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
5525 7095 6.404403 CCATTGGATGTGATGCTATAAGATGC 60.404 42.308 0.00 0.00 0.00 3.91
5526 7096 6.404403 GCCATTGGATGTGATGCTATAAGATG 60.404 42.308 6.95 0.00 0.00 2.90
5527 7097 5.651139 GCCATTGGATGTGATGCTATAAGAT 59.349 40.000 6.95 0.00 0.00 2.40
5528 7098 5.005740 GCCATTGGATGTGATGCTATAAGA 58.994 41.667 6.95 0.00 0.00 2.10
5529 7099 5.008331 AGCCATTGGATGTGATGCTATAAG 58.992 41.667 6.95 0.00 0.00 1.73
5530 7100 4.989277 AGCCATTGGATGTGATGCTATAA 58.011 39.130 6.95 0.00 0.00 0.98
5531 7101 4.645863 AGCCATTGGATGTGATGCTATA 57.354 40.909 6.95 0.00 0.00 1.31
5532 7102 3.520691 AGCCATTGGATGTGATGCTAT 57.479 42.857 6.95 0.00 0.00 2.97
5533 7103 4.645863 ATAGCCATTGGATGTGATGCTA 57.354 40.909 6.95 0.00 0.00 3.49
5534 7104 3.520691 ATAGCCATTGGATGTGATGCT 57.479 42.857 6.95 0.00 0.00 3.79
5535 7105 5.710513 TTTATAGCCATTGGATGTGATGC 57.289 39.130 6.95 0.00 0.00 3.91
5536 7106 6.266103 ACCTTTTATAGCCATTGGATGTGATG 59.734 38.462 6.95 0.00 0.00 3.07
5537 7107 6.266103 CACCTTTTATAGCCATTGGATGTGAT 59.734 38.462 6.95 0.00 0.00 3.06
5538 7108 5.593909 CACCTTTTATAGCCATTGGATGTGA 59.406 40.000 6.95 0.00 0.00 3.58
5539 7109 5.593909 TCACCTTTTATAGCCATTGGATGTG 59.406 40.000 6.95 2.95 0.00 3.21
5540 7110 5.765510 TCACCTTTTATAGCCATTGGATGT 58.234 37.500 6.95 0.10 0.00 3.06
5541 7111 6.713762 TTCACCTTTTATAGCCATTGGATG 57.286 37.500 6.95 0.00 0.00 3.51
5542 7112 7.068702 TCATTCACCTTTTATAGCCATTGGAT 58.931 34.615 6.95 1.78 0.00 3.41
5543 7113 6.430864 TCATTCACCTTTTATAGCCATTGGA 58.569 36.000 6.95 0.00 0.00 3.53
5544 7114 6.547141 TCTCATTCACCTTTTATAGCCATTGG 59.453 38.462 0.00 0.00 0.00 3.16
5545 7115 7.420800 GTCTCATTCACCTTTTATAGCCATTG 58.579 38.462 0.00 0.00 0.00 2.82
5546 7116 6.547510 GGTCTCATTCACCTTTTATAGCCATT 59.452 38.462 0.00 0.00 0.00 3.16
5547 7117 6.064717 GGTCTCATTCACCTTTTATAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
5548 7118 5.045213 TGGTCTCATTCACCTTTTATAGCCA 60.045 40.000 0.00 0.00 34.66 4.75
5549 7119 5.437060 TGGTCTCATTCACCTTTTATAGCC 58.563 41.667 0.00 0.00 34.66 3.93
5550 7120 7.391148 TTTGGTCTCATTCACCTTTTATAGC 57.609 36.000 0.00 0.00 34.66 2.97
5556 7126 9.927081 AGATATAATTTGGTCTCATTCACCTTT 57.073 29.630 0.00 0.00 34.66 3.11
5557 7127 9.566432 GAGATATAATTTGGTCTCATTCACCTT 57.434 33.333 8.11 0.00 37.60 3.50
5558 7128 8.717717 TGAGATATAATTTGGTCTCATTCACCT 58.282 33.333 10.50 0.00 41.40 4.00
5559 7129 8.908786 TGAGATATAATTTGGTCTCATTCACC 57.091 34.615 10.50 0.00 41.40 4.02
5587 7157 8.803235 TCTTACAGTTTTGCTAGAACTCATCTA 58.197 33.333 0.00 0.00 39.71 1.98
5588 7158 7.671302 TCTTACAGTTTTGCTAGAACTCATCT 58.329 34.615 0.00 0.00 42.48 2.90
5589 7159 7.891183 TCTTACAGTTTTGCTAGAACTCATC 57.109 36.000 0.00 0.00 35.26 2.92
5590 7160 8.854614 ATTCTTACAGTTTTGCTAGAACTCAT 57.145 30.769 0.00 0.00 35.26 2.90
5591 7161 8.677148 AATTCTTACAGTTTTGCTAGAACTCA 57.323 30.769 0.00 0.00 35.26 3.41
5712 7292 9.338291 GGAAAAAGACATAATCGAAACCTAAAC 57.662 33.333 0.00 0.00 0.00 2.01
5724 7304 4.997565 CATGGCGTGGAAAAAGACATAAT 58.002 39.130 0.00 0.00 33.12 1.28
5745 7325 6.734104 GCAAAATGCAATTGTAATTACCCA 57.266 33.333 13.01 0.26 44.26 4.51
5961 7566 9.685276 TCATCCATCGGCATATAATCTTTTATT 57.315 29.630 0.00 0.00 30.64 1.40
5962 7567 9.334947 CTCATCCATCGGCATATAATCTTTTAT 57.665 33.333 0.00 0.00 32.75 1.40
6338 7947 5.107065 GCTCGATCGGAAAGAAGAAGAAAAA 60.107 40.000 16.41 0.00 0.00 1.94
6393 8002 6.307776 TCAGCTAGGAGTATATGCAGTAGTT 58.692 40.000 0.00 0.00 0.00 2.24
6397 8006 5.221541 GGTTTCAGCTAGGAGTATATGCAGT 60.222 44.000 0.00 0.00 0.00 4.40
6487 8096 1.694696 CAGGAGCCCCTATGGTTAGTC 59.305 57.143 0.00 0.00 42.02 2.59
6488 8097 1.695989 CCAGGAGCCCCTATGGTTAGT 60.696 57.143 0.00 0.00 42.02 2.24
6576 8803 6.073765 CGTACTATGATGGACAAAACCTATGC 60.074 42.308 0.00 0.00 0.00 3.14
6596 8823 0.318445 GTGAGTTGACACGGCGTACT 60.318 55.000 14.22 13.24 0.00 2.73
6601 8828 0.320771 AGGATGTGAGTTGACACGGC 60.321 55.000 0.00 0.00 42.86 5.68
6614 8841 4.523173 TCAGAGAAACAGTCGTAAGGATGT 59.477 41.667 0.00 0.00 37.90 3.06
6635 8862 0.976641 AGAACAGGCATCGTCCTTCA 59.023 50.000 0.00 0.00 33.25 3.02
6636 8863 2.100605 AAGAACAGGCATCGTCCTTC 57.899 50.000 0.00 0.00 33.25 3.46
6647 8879 1.072965 AGAGACAGCCCAAAGAACAGG 59.927 52.381 0.00 0.00 0.00 4.00
6653 8885 2.557920 AGTTGAGAGACAGCCCAAAG 57.442 50.000 0.00 0.00 0.00 2.77
6689 8921 2.747460 TGACAGCGCCATGAAGCC 60.747 61.111 2.29 0.00 0.00 4.35
6746 9000 2.415625 CCTGGCTGTGTACGTAGAAGTC 60.416 54.545 0.00 0.00 0.00 3.01
6748 9002 1.736032 GCCTGGCTGTGTACGTAGAAG 60.736 57.143 12.43 0.00 0.00 2.85
6749 9003 0.245539 GCCTGGCTGTGTACGTAGAA 59.754 55.000 12.43 0.00 0.00 2.10
6750 9004 0.896479 TGCCTGGCTGTGTACGTAGA 60.896 55.000 21.03 0.00 0.00 2.59
6751 9005 0.175760 ATGCCTGGCTGTGTACGTAG 59.824 55.000 21.03 0.00 0.00 3.51
6752 9006 0.108377 CATGCCTGGCTGTGTACGTA 60.108 55.000 21.03 0.00 0.00 3.57
6753 9007 1.375908 CATGCCTGGCTGTGTACGT 60.376 57.895 21.03 0.00 0.00 3.57
6754 9008 2.753966 GCATGCCTGGCTGTGTACG 61.754 63.158 21.03 1.54 0.00 3.67
6755 9009 1.033746 ATGCATGCCTGGCTGTGTAC 61.034 55.000 21.03 7.59 0.00 2.90
6844 9101 5.186797 CCATTGCCTCCACAAAAGGTTAATA 59.813 40.000 0.00 0.00 36.21 0.98
6856 9114 4.023707 CGAAGAATATTCCATTGCCTCCAC 60.024 45.833 11.92 0.00 0.00 4.02
6883 9141 6.922957 TCTGATTTCCGTTTCAGAAATTTTGG 59.077 34.615 0.00 0.06 43.97 3.28
6895 9153 2.287368 GCCGTTTGTCTGATTTCCGTTT 60.287 45.455 0.00 0.00 0.00 3.60
6896 9154 1.265905 GCCGTTTGTCTGATTTCCGTT 59.734 47.619 0.00 0.00 0.00 4.44
6897 9155 0.872388 GCCGTTTGTCTGATTTCCGT 59.128 50.000 0.00 0.00 0.00 4.69
6898 9156 0.871722 TGCCGTTTGTCTGATTTCCG 59.128 50.000 0.00 0.00 0.00 4.30
6899 9157 3.049912 GTTTGCCGTTTGTCTGATTTCC 58.950 45.455 0.00 0.00 0.00 3.13
6900 9158 2.719046 CGTTTGCCGTTTGTCTGATTTC 59.281 45.455 0.00 0.00 0.00 2.17
6901 9159 2.542824 CCGTTTGCCGTTTGTCTGATTT 60.543 45.455 0.00 0.00 33.66 2.17
6902 9160 1.001815 CCGTTTGCCGTTTGTCTGATT 60.002 47.619 0.00 0.00 33.66 2.57
6903 9161 0.591170 CCGTTTGCCGTTTGTCTGAT 59.409 50.000 0.00 0.00 33.66 2.90
6904 9162 0.462225 TCCGTTTGCCGTTTGTCTGA 60.462 50.000 0.00 0.00 33.66 3.27
6905 9163 0.378962 TTCCGTTTGCCGTTTGTCTG 59.621 50.000 0.00 0.00 33.66 3.51
6906 9164 1.265905 GATTCCGTTTGCCGTTTGTCT 59.734 47.619 0.00 0.00 33.66 3.41
6907 9165 1.002251 TGATTCCGTTTGCCGTTTGTC 60.002 47.619 0.00 0.00 33.66 3.18
6908 9166 1.025812 TGATTCCGTTTGCCGTTTGT 58.974 45.000 0.00 0.00 33.66 2.83
6909 9167 2.050691 CTTGATTCCGTTTGCCGTTTG 58.949 47.619 0.00 0.00 33.66 2.93
6950 9224 2.347490 GGTGCTGGGCTTCGAAGA 59.653 61.111 28.95 7.12 0.00 2.87
6951 9225 3.121030 CGGTGCTGGGCTTCGAAG 61.121 66.667 21.02 21.02 0.00 3.79
6963 9241 4.314440 TCAGCAGGTGTCCGGTGC 62.314 66.667 0.00 3.03 37.48 5.01
6993 9274 2.357517 AGTGAGTGAAAGCCGGCG 60.358 61.111 23.20 0.00 0.00 6.46
7021 9302 4.396166 CGATGTTAACCCTTTCAGCTGAAT 59.604 41.667 28.89 16.42 33.54 2.57
7026 9307 2.678336 CTCCGATGTTAACCCTTTCAGC 59.322 50.000 2.48 0.00 0.00 4.26
7112 9394 3.924114 TTTTCCACTCTCACTGACCAA 57.076 42.857 0.00 0.00 0.00 3.67
7180 9462 3.131478 GCGGGCCACATGGTGTAC 61.131 66.667 4.39 0.00 37.57 2.90
7181 9463 4.418328 GGCGGGCCACATGGTGTA 62.418 66.667 4.39 0.00 37.57 2.90
7196 9478 4.639171 GAGCGAGCGAGGCTAGGC 62.639 72.222 8.55 8.55 41.72 3.93
7197 9479 4.320928 CGAGCGAGCGAGGCTAGG 62.321 72.222 0.00 0.00 41.72 3.02
7198 9480 4.973360 GCGAGCGAGCGAGGCTAG 62.973 72.222 1.41 0.00 41.72 3.42
7276 9561 3.297391 GGAACCAGCTCGATGGATC 57.703 57.895 12.02 9.17 43.57 3.36
7297 9582 4.201950 CGAAATGCAGATTCCCGAAGAAAT 60.202 41.667 8.88 0.00 38.21 2.17
7326 12076 6.653020 AGTACTGATGAGTTATGCAAATGGA 58.347 36.000 0.00 0.00 33.21 3.41
7346 12096 8.644318 ACAAAATCATTCCGTGATACTAGTAC 57.356 34.615 4.31 0.35 46.80 2.73
7355 12105 6.743110 TCAAATTGACAAAATCATTCCGTGA 58.257 32.000 0.00 0.00 42.06 4.35
7356 12106 7.585286 ATCAAATTGACAAAATCATTCCGTG 57.415 32.000 0.00 0.00 37.11 4.94
7440 12205 3.764237 AATCCACGAGTTACCAACACT 57.236 42.857 0.00 0.00 0.00 3.55
7461 12226 3.527533 GTTACCAGGTCAATGTCGCATA 58.472 45.455 0.00 0.00 0.00 3.14
7519 12288 4.966787 GCCGGTCCTGTTTGCCCA 62.967 66.667 1.90 0.00 0.00 5.36
7524 12293 2.113139 CACCAGCCGGTCCTGTTT 59.887 61.111 1.90 0.00 44.71 2.83
7530 12299 4.767255 CTCCAGCACCAGCCGGTC 62.767 72.222 1.90 0.00 44.71 4.79
7559 12328 1.153549 CAGGTAGTGCTCCGCCTTC 60.154 63.158 0.00 0.00 0.00 3.46
7625 12394 4.386951 ACGTACAGCATGCCGCCA 62.387 61.111 15.66 0.00 42.53 5.69
7916 12685 1.659622 CCTGCATGCAGCCGATGAAA 61.660 55.000 37.11 4.47 44.83 2.69
7967 12736 2.258726 GGTGAGCACGTTGGGGTTC 61.259 63.158 0.00 0.00 0.00 3.62
8194 12963 1.644509 AAGAATTTCCCACCCAAGCC 58.355 50.000 0.00 0.00 0.00 4.35
8311 13082 6.533367 GTCTCCTCATTGTTCATTCACTACTC 59.467 42.308 0.00 0.00 0.00 2.59
8343 13117 9.698309 AATACAAGTATCTAATCTTCACCATCG 57.302 33.333 0.00 0.00 0.00 3.84
8463 13237 2.030805 GCAGTGGTCCAAAATGTCAGAC 60.031 50.000 0.00 0.00 0.00 3.51
8465 13239 1.955778 TGCAGTGGTCCAAAATGTCAG 59.044 47.619 0.00 0.00 0.00 3.51
8658 13444 3.181487 CGTGGAACATCCCATCCAATTTC 60.181 47.826 0.00 0.00 46.78 2.17
8663 13449 0.035534 CACGTGGAACATCCCATCCA 60.036 55.000 7.95 0.00 44.52 3.41
8671 13457 5.121142 CGATTAACTTAACCACGTGGAACAT 59.879 40.000 40.21 23.43 44.52 2.71
8711 13500 9.199982 CACATCTTAAAGCAGAAAACAAATCAT 57.800 29.630 0.00 0.00 0.00 2.45
8747 13536 1.479170 CGGGCCGTTTACACAAAAAC 58.521 50.000 19.97 0.00 36.26 2.43
8774 13563 1.103398 GCACCTCAATCCCCCAATCG 61.103 60.000 0.00 0.00 0.00 3.34
8815 13604 1.095228 CGCGCAAACCATGACCCTAT 61.095 55.000 8.75 0.00 0.00 2.57
8823 13612 1.212490 CAATCACCGCGCAAACCAT 59.788 52.632 8.75 0.00 0.00 3.55
8844 13633 1.381735 GAAAAGGCCCCATCCCCTG 60.382 63.158 0.00 0.00 0.00 4.45
8850 13640 3.011708 ACAGACAATAGAAAAGGCCCCAT 59.988 43.478 0.00 0.00 0.00 4.00
8956 13753 4.686191 AAGGCACAAAAACATGAATGGA 57.314 36.364 0.00 0.00 0.00 3.41
9081 13888 8.961092 CAATTCAAGTTACACACAAGAAAGATG 58.039 33.333 0.00 0.00 0.00 2.90
9083 13890 8.275015 TCAATTCAAGTTACACACAAGAAAGA 57.725 30.769 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.