Multiple sequence alignment - TraesCS5B01G196200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G196200 chr5B 100.000 5929 0 0 1 5929 353939092 353933164 0.000000e+00 10949.0
1 TraesCS5B01G196200 chr5B 97.749 622 12 2 5309 5929 18181064 18181684 0.000000e+00 1070.0
2 TraesCS5B01G196200 chr5B 96.166 626 22 2 5306 5929 123783922 123784547 0.000000e+00 1022.0
3 TraesCS5B01G196200 chr5B 95.961 619 24 1 5312 5929 34293178 34293796 0.000000e+00 1003.0
4 TraesCS5B01G196200 chr5B 89.706 136 13 1 619 753 131471930 131472065 7.900000e-39 172.0
5 TraesCS5B01G196200 chr5D 92.914 3542 196 30 927 4426 308633304 308629776 0.000000e+00 5099.0
6 TraesCS5B01G196200 chr5D 88.701 885 49 14 4458 5308 308629777 308628910 0.000000e+00 1033.0
7 TraesCS5B01G196200 chr5D 85.946 185 18 7 749 928 308633529 308633348 2.180000e-44 191.0
8 TraesCS5B01G196200 chr5D 88.119 101 9 3 3990 4089 530647504 530647406 3.750000e-22 117.0
9 TraesCS5B01G196200 chr5D 82.301 113 11 7 377 482 470376461 470376571 8.180000e-14 89.8
10 TraesCS5B01G196200 chr5D 90.000 70 5 2 10 78 495222629 495222561 8.180000e-14 89.8
11 TraesCS5B01G196200 chr5D 90.741 54 5 0 417 470 422935807 422935754 8.240000e-09 73.1
12 TraesCS5B01G196200 chr5D 97.500 40 1 0 4824 4863 308629361 308629322 1.070000e-07 69.4
13 TraesCS5B01G196200 chr5A 92.935 3199 172 27 924 4083 389159473 389162656 0.000000e+00 4606.0
14 TraesCS5B01G196200 chr5A 91.156 441 17 2 4458 4877 389163029 389163468 3.980000e-161 579.0
15 TraesCS5B01G196200 chr5A 87.786 393 23 5 4048 4426 389162649 389163030 2.540000e-118 436.0
16 TraesCS5B01G196200 chr5A 82.437 279 21 7 4912 5174 389163458 389163724 1.000000e-52 219.0
17 TraesCS5B01G196200 chr5A 86.555 119 7 4 749 861 389159194 389159309 8.070000e-24 122.0
18 TraesCS5B01G196200 chr5A 94.828 58 3 0 5168 5225 389163742 389163799 2.280000e-14 91.6
19 TraesCS5B01G196200 chr1B 98.232 622 10 1 5309 5929 643568751 643569372 0.000000e+00 1086.0
20 TraesCS5B01G196200 chr1B 89.706 136 13 1 619 753 366085771 366085906 7.900000e-39 172.0
21 TraesCS5B01G196200 chr1B 88.710 62 6 1 423 484 327360195 327360255 2.290000e-09 75.0
22 TraesCS5B01G196200 chr7B 98.074 623 10 2 5309 5929 379913037 379913659 0.000000e+00 1083.0
23 TraesCS5B01G196200 chr7B 97.592 623 14 1 5308 5929 666612790 666613412 0.000000e+00 1066.0
24 TraesCS5B01G196200 chr7B 96.945 622 18 1 5309 5929 664954522 664953901 0.000000e+00 1042.0
25 TraesCS5B01G196200 chr7B 91.339 127 11 0 612 738 637824445 637824571 2.200000e-39 174.0
26 TraesCS5B01G196200 chr7B 87.500 136 16 1 619 753 46117114 46117249 7.960000e-34 156.0
27 TraesCS5B01G196200 chr7B 87.692 130 16 0 611 740 18215310 18215439 1.030000e-32 152.0
28 TraesCS5B01G196200 chr3B 97.464 631 13 3 5301 5929 734238781 734238152 0.000000e+00 1074.0
29 TraesCS5B01G196200 chr3B 97.147 631 16 2 5301 5929 734230427 734229797 0.000000e+00 1064.0
30 TraesCS5B01G196200 chr3B 80.819 464 53 16 3920 4350 254941582 254941122 1.230000e-86 331.0
31 TraesCS5B01G196200 chr3B 88.722 133 15 0 612 744 554482588 554482720 4.750000e-36 163.0
32 TraesCS5B01G196200 chr3B 97.826 46 1 0 425 470 783113458 783113413 4.930000e-11 80.5
33 TraesCS5B01G196200 chr2D 82.018 456 41 13 3920 4351 649143438 649143876 3.400000e-92 350.0
34 TraesCS5B01G196200 chr2D 90.654 107 7 2 379 483 579943768 579943663 8.010000e-29 139.0
35 TraesCS5B01G196200 chr2A 81.319 455 43 14 3920 4349 775528997 775528560 1.230000e-86 331.0
36 TraesCS5B01G196200 chr7A 79.516 537 48 31 2 490 163110416 163109894 5.730000e-85 326.0
37 TraesCS5B01G196200 chr7A 88.073 109 11 2 379 485 163078696 163078588 1.730000e-25 128.0
38 TraesCS5B01G196200 chr3A 82.574 373 47 9 3990 4348 215957406 215957038 4.460000e-81 313.0
39 TraesCS5B01G196200 chr3A 78.261 92 17 2 380 470 264949112 264949023 8.300000e-04 56.5
40 TraesCS5B01G196200 chr3D 82.228 377 43 10 3990 4350 175544560 175544192 2.680000e-78 303.0
41 TraesCS5B01G196200 chr3D 90.370 135 12 1 612 745 7749969 7749835 6.110000e-40 176.0
42 TraesCS5B01G196200 chr3D 90.909 132 10 2 611 741 448569762 448569632 6.110000e-40 176.0
43 TraesCS5B01G196200 chr3D 93.182 44 2 1 858 900 609605086 609605129 4.960000e-06 63.9
44 TraesCS5B01G196200 chr2B 79.736 454 47 21 3920 4352 785133685 785134114 2.700000e-73 287.0
45 TraesCS5B01G196200 chr7D 91.852 135 11 0 607 741 585714049 585713915 7.840000e-44 189.0
46 TraesCS5B01G196200 chr7D 91.406 128 11 0 611 738 30043757 30043630 6.110000e-40 176.0
47 TraesCS5B01G196200 chr7D 91.406 128 11 0 612 739 102302083 102302210 6.110000e-40 176.0
48 TraesCS5B01G196200 chr4D 92.063 126 10 0 613 738 197021927 197022052 1.700000e-40 178.0
49 TraesCS5B01G196200 chr6B 88.806 134 14 1 608 741 271840089 271839957 4.750000e-36 163.0
50 TraesCS5B01G196200 chr1A 84.615 78 6 5 406 482 60951591 60951663 8.240000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G196200 chr5B 353933164 353939092 5928 True 10949.000000 10949 100.000000 1 5929 1 chr5B.!!$R1 5928
1 TraesCS5B01G196200 chr5B 18181064 18181684 620 False 1070.000000 1070 97.749000 5309 5929 1 chr5B.!!$F1 620
2 TraesCS5B01G196200 chr5B 123783922 123784547 625 False 1022.000000 1022 96.166000 5306 5929 1 chr5B.!!$F3 623
3 TraesCS5B01G196200 chr5B 34293178 34293796 618 False 1003.000000 1003 95.961000 5312 5929 1 chr5B.!!$F2 617
4 TraesCS5B01G196200 chr5D 308628910 308633529 4619 True 1598.100000 5099 91.265250 749 5308 4 chr5D.!!$R4 4559
5 TraesCS5B01G196200 chr5A 389159194 389163799 4605 False 1008.933333 4606 89.282833 749 5225 6 chr5A.!!$F1 4476
6 TraesCS5B01G196200 chr1B 643568751 643569372 621 False 1086.000000 1086 98.232000 5309 5929 1 chr1B.!!$F3 620
7 TraesCS5B01G196200 chr7B 379913037 379913659 622 False 1083.000000 1083 98.074000 5309 5929 1 chr7B.!!$F3 620
8 TraesCS5B01G196200 chr7B 666612790 666613412 622 False 1066.000000 1066 97.592000 5308 5929 1 chr7B.!!$F5 621
9 TraesCS5B01G196200 chr7B 664953901 664954522 621 True 1042.000000 1042 96.945000 5309 5929 1 chr7B.!!$R1 620
10 TraesCS5B01G196200 chr3B 734238152 734238781 629 True 1074.000000 1074 97.464000 5301 5929 1 chr3B.!!$R3 628
11 TraesCS5B01G196200 chr3B 734229797 734230427 630 True 1064.000000 1064 97.147000 5301 5929 1 chr3B.!!$R2 628
12 TraesCS5B01G196200 chr7A 163109894 163110416 522 True 326.000000 326 79.516000 2 490 1 chr7A.!!$R2 488

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
501 502 0.749454 GGGCGCATGTTCTTGAGGAT 60.749 55.0 10.83 0.0 0.00 3.24 F
1762 1984 0.460284 ATTGCGCTGGTAGAAGTCGG 60.460 55.0 9.73 0.0 0.00 4.79 F
1784 2006 0.675837 CGGTGGTCAGAGAGGTCGTA 60.676 60.0 0.00 0.0 0.00 3.43 F
2733 2958 2.495155 TGTGTGCCACTATTCTGCAT 57.505 45.0 0.00 0.0 37.34 3.96 F
4109 4410 0.039180 TCGGGCTCCAGTCTAGACAA 59.961 55.0 24.44 8.8 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1811 2033 0.807667 CCTCTCAATCGGCTCCAACG 60.808 60.0 0.0 0.0 0.00 4.10 R
3417 3646 0.240945 CATGCCGACTTCAAACCCAC 59.759 55.0 0.0 0.0 0.00 4.61 R
3441 3670 0.875059 ACGCTTAAAGCTTCTGCACC 59.125 50.0 0.0 0.0 39.60 5.01 R
4552 4888 0.106819 AGACAAGGAGATGCCCATGC 60.107 55.0 0.0 0.0 37.37 4.06 R
5526 5934 0.034337 GGTAGACGCCAAGGTTCACA 59.966 55.0 0.0 0.0 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.301662 TTGGGAAGGGGGAGGGCT 62.302 66.667 0.00 0.00 0.00 5.19
101 102 4.504916 CCGACCAGCAGGCTCGAG 62.505 72.222 17.32 8.45 39.32 4.04
103 104 4.074526 GACCAGCAGGCTCGAGCA 62.075 66.667 36.27 0.00 44.36 4.26
104 105 4.079850 ACCAGCAGGCTCGAGCAG 62.080 66.667 36.27 28.02 44.36 4.24
131 132 2.517166 GGGGAGCCCAAGAATCGC 60.517 66.667 8.02 0.00 44.65 4.58
132 133 2.517166 GGGAGCCCAAGAATCGCC 60.517 66.667 0.00 0.00 35.81 5.54
133 134 2.897350 GGAGCCCAAGAATCGCCG 60.897 66.667 0.00 0.00 0.00 6.46
134 135 2.897350 GAGCCCAAGAATCGCCGG 60.897 66.667 0.00 0.00 0.00 6.13
135 136 3.385749 GAGCCCAAGAATCGCCGGA 62.386 63.158 5.05 0.00 0.00 5.14
136 137 2.437716 GCCCAAGAATCGCCGGAA 60.438 61.111 5.05 0.00 0.00 4.30
137 138 2.472909 GCCCAAGAATCGCCGGAAG 61.473 63.158 5.05 0.00 0.00 3.46
160 161 4.735132 CGAGTCGCGGGCAAAGGA 62.735 66.667 6.13 0.00 36.03 3.36
161 162 2.815647 GAGTCGCGGGCAAAGGAG 60.816 66.667 6.13 0.00 0.00 3.69
162 163 4.394712 AGTCGCGGGCAAAGGAGG 62.395 66.667 6.13 0.00 0.00 4.30
166 167 4.803908 GCGGGCAAAGGAGGGGAG 62.804 72.222 0.00 0.00 0.00 4.30
167 168 4.115199 CGGGCAAAGGAGGGGAGG 62.115 72.222 0.00 0.00 0.00 4.30
168 169 4.448976 GGGCAAAGGAGGGGAGGC 62.449 72.222 0.00 0.00 0.00 4.70
169 170 4.803908 GGCAAAGGAGGGGAGGCG 62.804 72.222 0.00 0.00 0.00 5.52
170 171 4.035102 GCAAAGGAGGGGAGGCGT 62.035 66.667 0.00 0.00 0.00 5.68
171 172 2.045926 CAAAGGAGGGGAGGCGTG 60.046 66.667 0.00 0.00 0.00 5.34
172 173 2.529389 AAAGGAGGGGAGGCGTGT 60.529 61.111 0.00 0.00 0.00 4.49
173 174 2.895424 AAAGGAGGGGAGGCGTGTG 61.895 63.158 0.00 0.00 0.00 3.82
182 183 4.974438 AGGCGTGTGGGGAGGGAA 62.974 66.667 0.00 0.00 0.00 3.97
183 184 3.961414 GGCGTGTGGGGAGGGAAA 61.961 66.667 0.00 0.00 0.00 3.13
184 185 2.359975 GCGTGTGGGGAGGGAAAG 60.360 66.667 0.00 0.00 0.00 2.62
185 186 2.359975 CGTGTGGGGAGGGAAAGC 60.360 66.667 0.00 0.00 0.00 3.51
186 187 2.895424 CGTGTGGGGAGGGAAAGCT 61.895 63.158 0.00 0.00 0.00 3.74
187 188 1.303643 GTGTGGGGAGGGAAAGCTG 60.304 63.158 0.00 0.00 0.00 4.24
188 189 2.361737 GTGGGGAGGGAAAGCTGC 60.362 66.667 0.00 0.00 0.00 5.25
189 190 4.033776 TGGGGAGGGAAAGCTGCG 62.034 66.667 0.00 0.00 0.00 5.18
190 191 4.803908 GGGGAGGGAAAGCTGCGG 62.804 72.222 0.00 0.00 0.00 5.69
266 267 2.040043 CTCCTGGGGAGGCTGGAT 60.040 66.667 5.73 0.00 45.43 3.41
267 268 2.040464 TCCTGGGGAGGCTGGATC 60.040 66.667 0.00 0.00 0.00 3.36
268 269 3.174265 CCTGGGGAGGCTGGATCC 61.174 72.222 4.20 4.20 35.99 3.36
269 270 3.554342 CTGGGGAGGCTGGATCCG 61.554 72.222 7.39 3.14 37.75 4.18
287 288 3.411351 CCGCCGTCGAACCAACAG 61.411 66.667 0.00 0.00 38.10 3.16
288 289 3.411351 CGCCGTCGAACCAACAGG 61.411 66.667 0.00 0.00 38.10 4.00
289 290 3.047877 GCCGTCGAACCAACAGGG 61.048 66.667 0.00 0.00 44.81 4.45
290 291 2.358247 CCGTCGAACCAACAGGGG 60.358 66.667 0.00 0.00 42.91 4.79
291 292 2.358247 CGTCGAACCAACAGGGGG 60.358 66.667 0.00 0.00 42.91 5.40
292 293 2.874664 CGTCGAACCAACAGGGGGA 61.875 63.158 0.00 0.00 42.91 4.81
293 294 1.003718 GTCGAACCAACAGGGGGAG 60.004 63.158 0.00 0.00 42.91 4.30
294 295 2.221299 TCGAACCAACAGGGGGAGG 61.221 63.158 0.00 0.00 42.91 4.30
295 296 2.763902 GAACCAACAGGGGGAGGG 59.236 66.667 0.00 0.00 42.91 4.30
296 297 3.585525 GAACCAACAGGGGGAGGGC 62.586 68.421 0.00 0.00 42.91 5.19
324 325 4.016706 CGAAGAGGGGTGGGCGTT 62.017 66.667 0.00 0.00 0.00 4.84
325 326 2.359975 GAAGAGGGGTGGGCGTTG 60.360 66.667 0.00 0.00 0.00 4.10
326 327 3.920093 GAAGAGGGGTGGGCGTTGG 62.920 68.421 0.00 0.00 0.00 3.77
374 375 4.722700 CCACCTTCCTGGGGCACG 62.723 72.222 0.00 0.00 38.11 5.34
375 376 4.722700 CACCTTCCTGGGGCACGG 62.723 72.222 0.00 0.00 41.11 4.94
420 421 4.835891 CCGACGGGGGCTCCTAGT 62.836 72.222 5.81 2.57 0.00 2.57
421 422 2.194056 CGACGGGGGCTCCTAGTA 59.806 66.667 0.52 0.00 0.00 1.82
422 423 1.897615 CGACGGGGGCTCCTAGTAG 60.898 68.421 0.52 0.00 0.00 2.57
423 424 2.123382 ACGGGGGCTCCTAGTAGC 60.123 66.667 0.52 0.00 41.99 3.58
424 425 3.296054 CGGGGGCTCCTAGTAGCG 61.296 72.222 0.52 0.00 43.74 4.26
425 426 2.918276 GGGGGCTCCTAGTAGCGG 60.918 72.222 0.52 0.00 43.74 5.52
426 427 3.617735 GGGGCTCCTAGTAGCGGC 61.618 72.222 0.00 0.00 43.74 6.53
427 428 3.979739 GGGCTCCTAGTAGCGGCG 61.980 72.222 0.51 0.51 43.74 6.46
428 429 3.979739 GGCTCCTAGTAGCGGCGG 61.980 72.222 9.78 0.00 43.74 6.13
429 430 4.649310 GCTCCTAGTAGCGGCGGC 62.649 72.222 9.78 8.43 40.37 6.53
456 457 4.135153 CCCGTGTCGCCAGAGGAG 62.135 72.222 0.00 0.00 0.00 3.69
457 458 4.135153 CCGTGTCGCCAGAGGAGG 62.135 72.222 0.00 0.00 0.00 4.30
458 459 4.135153 CGTGTCGCCAGAGGAGGG 62.135 72.222 0.00 0.00 0.00 4.30
459 460 2.997897 GTGTCGCCAGAGGAGGGT 60.998 66.667 0.00 0.00 0.00 4.34
460 461 2.997315 TGTCGCCAGAGGAGGGTG 60.997 66.667 0.00 0.00 37.26 4.61
461 462 2.680352 GTCGCCAGAGGAGGGTGA 60.680 66.667 0.00 0.00 42.37 4.02
462 463 2.680352 TCGCCAGAGGAGGGTGAC 60.680 66.667 0.00 0.00 39.88 3.67
463 464 4.135153 CGCCAGAGGAGGGTGACG 62.135 72.222 0.00 0.00 38.18 4.35
464 465 4.459089 GCCAGAGGAGGGTGACGC 62.459 72.222 0.00 0.00 0.00 5.19
465 466 4.135153 CCAGAGGAGGGTGACGCG 62.135 72.222 3.53 3.53 0.00 6.01
466 467 4.135153 CAGAGGAGGGTGACGCGG 62.135 72.222 12.47 0.00 0.00 6.46
497 498 2.361104 GGGGGCGCATGTTCTTGA 60.361 61.111 10.83 0.00 0.00 3.02
498 499 2.409870 GGGGGCGCATGTTCTTGAG 61.410 63.158 10.83 0.00 0.00 3.02
499 500 2.409870 GGGGCGCATGTTCTTGAGG 61.410 63.158 10.83 0.00 0.00 3.86
500 501 1.377202 GGGCGCATGTTCTTGAGGA 60.377 57.895 10.83 0.00 0.00 3.71
501 502 0.749454 GGGCGCATGTTCTTGAGGAT 60.749 55.000 10.83 0.00 0.00 3.24
502 503 1.475034 GGGCGCATGTTCTTGAGGATA 60.475 52.381 10.83 0.00 0.00 2.59
503 504 2.498167 GGCGCATGTTCTTGAGGATAT 58.502 47.619 10.83 0.00 0.00 1.63
504 505 3.557054 GGGCGCATGTTCTTGAGGATATA 60.557 47.826 10.83 0.00 0.00 0.86
505 506 4.065088 GGCGCATGTTCTTGAGGATATAA 58.935 43.478 10.83 0.00 0.00 0.98
506 507 4.697352 GGCGCATGTTCTTGAGGATATAAT 59.303 41.667 10.83 0.00 0.00 1.28
507 508 5.182001 GGCGCATGTTCTTGAGGATATAATT 59.818 40.000 10.83 0.00 0.00 1.40
508 509 6.082338 GCGCATGTTCTTGAGGATATAATTG 58.918 40.000 0.30 0.00 0.00 2.32
509 510 6.293626 GCGCATGTTCTTGAGGATATAATTGT 60.294 38.462 0.30 0.00 0.00 2.71
510 511 7.293745 CGCATGTTCTTGAGGATATAATTGTC 58.706 38.462 0.00 0.00 0.00 3.18
511 512 7.293745 GCATGTTCTTGAGGATATAATTGTCG 58.706 38.462 0.00 0.00 0.00 4.35
512 513 6.844696 TGTTCTTGAGGATATAATTGTCGC 57.155 37.500 0.00 0.00 0.00 5.19
513 514 6.582636 TGTTCTTGAGGATATAATTGTCGCT 58.417 36.000 0.00 0.00 0.00 4.93
514 515 7.722363 TGTTCTTGAGGATATAATTGTCGCTA 58.278 34.615 0.00 0.00 0.00 4.26
515 516 7.652105 TGTTCTTGAGGATATAATTGTCGCTAC 59.348 37.037 0.00 0.00 0.00 3.58
516 517 7.526142 TCTTGAGGATATAATTGTCGCTACT 57.474 36.000 0.00 0.00 0.00 2.57
517 518 7.952671 TCTTGAGGATATAATTGTCGCTACTT 58.047 34.615 0.00 0.00 0.00 2.24
518 519 8.421784 TCTTGAGGATATAATTGTCGCTACTTT 58.578 33.333 0.00 0.00 0.00 2.66
519 520 9.692749 CTTGAGGATATAATTGTCGCTACTTTA 57.307 33.333 0.00 0.00 0.00 1.85
520 521 9.692749 TTGAGGATATAATTGTCGCTACTTTAG 57.307 33.333 0.00 0.00 0.00 1.85
521 522 8.857098 TGAGGATATAATTGTCGCTACTTTAGT 58.143 33.333 0.00 0.00 0.00 2.24
529 530 8.458212 AATTGTCGCTACTTTAGTAGTACAAC 57.542 34.615 25.25 16.33 46.45 3.32
530 531 7.824672 ATTGTCGCTACTTTAGTAGTACAACT 58.175 34.615 25.25 17.75 46.45 3.16
531 532 7.967303 ATTGTCGCTACTTTAGTAGTACAACTC 59.033 37.037 25.25 8.91 46.45 3.01
536 537 7.840342 CTACTTTAGTAGTACAACTCTCCGA 57.160 40.000 8.46 0.00 42.22 4.55
537 538 6.740411 ACTTTAGTAGTACAACTCTCCGAG 57.260 41.667 2.52 0.00 34.56 4.63
538 539 6.471146 ACTTTAGTAGTACAACTCTCCGAGA 58.529 40.000 2.52 0.00 34.56 4.04
539 540 6.939163 ACTTTAGTAGTACAACTCTCCGAGAA 59.061 38.462 2.52 0.00 34.56 2.87
540 541 7.446625 ACTTTAGTAGTACAACTCTCCGAGAAA 59.553 37.037 2.52 0.00 34.56 2.52
541 542 5.883503 AGTAGTACAACTCTCCGAGAAAG 57.116 43.478 2.52 0.00 33.32 2.62
542 543 5.315348 AGTAGTACAACTCTCCGAGAAAGT 58.685 41.667 2.52 1.53 33.32 2.66
543 544 6.471146 AGTAGTACAACTCTCCGAGAAAGTA 58.529 40.000 2.52 0.63 33.32 2.24
544 545 5.883503 AGTACAACTCTCCGAGAAAGTAG 57.116 43.478 0.00 0.00 33.32 2.57
545 546 5.315348 AGTACAACTCTCCGAGAAAGTAGT 58.685 41.667 0.00 3.48 33.32 2.73
546 547 5.769162 AGTACAACTCTCCGAGAAAGTAGTT 59.231 40.000 0.00 0.00 33.32 2.24
547 548 5.532664 ACAACTCTCCGAGAAAGTAGTTT 57.467 39.130 0.00 0.00 33.32 2.66
548 549 5.915175 ACAACTCTCCGAGAAAGTAGTTTT 58.085 37.500 0.00 0.00 33.32 2.43
549 550 5.984323 ACAACTCTCCGAGAAAGTAGTTTTC 59.016 40.000 0.00 0.00 44.52 2.29
585 586 4.928661 AAAACACGTATCAGTGCATCTC 57.071 40.909 0.00 0.00 45.45 2.75
586 587 2.586258 ACACGTATCAGTGCATCTCC 57.414 50.000 0.00 0.00 45.45 3.71
587 588 1.824852 ACACGTATCAGTGCATCTCCA 59.175 47.619 0.00 0.00 45.45 3.86
588 589 2.196749 CACGTATCAGTGCATCTCCAC 58.803 52.381 0.00 0.00 35.17 4.02
589 590 1.824852 ACGTATCAGTGCATCTCCACA 59.175 47.619 0.00 0.00 38.18 4.17
590 591 2.233676 ACGTATCAGTGCATCTCCACAA 59.766 45.455 0.00 0.00 38.18 3.33
591 592 3.261580 CGTATCAGTGCATCTCCACAAA 58.738 45.455 0.00 0.00 38.18 2.83
592 593 3.684305 CGTATCAGTGCATCTCCACAAAA 59.316 43.478 0.00 0.00 38.18 2.44
593 594 4.333649 CGTATCAGTGCATCTCCACAAAAT 59.666 41.667 0.00 0.00 38.18 1.82
594 595 4.978083 ATCAGTGCATCTCCACAAAATC 57.022 40.909 0.00 0.00 38.18 2.17
595 596 3.753815 TCAGTGCATCTCCACAAAATCA 58.246 40.909 0.00 0.00 38.18 2.57
596 597 4.143543 TCAGTGCATCTCCACAAAATCAA 58.856 39.130 0.00 0.00 38.18 2.57
597 598 4.583907 TCAGTGCATCTCCACAAAATCAAA 59.416 37.500 0.00 0.00 38.18 2.69
598 599 5.068855 TCAGTGCATCTCCACAAAATCAAAA 59.931 36.000 0.00 0.00 38.18 2.44
599 600 5.754406 CAGTGCATCTCCACAAAATCAAAAA 59.246 36.000 0.00 0.00 38.18 1.94
600 601 5.754890 AGTGCATCTCCACAAAATCAAAAAC 59.245 36.000 0.00 0.00 38.18 2.43
601 602 5.523188 GTGCATCTCCACAAAATCAAAAACA 59.477 36.000 0.00 0.00 35.80 2.83
602 603 6.036953 GTGCATCTCCACAAAATCAAAAACAA 59.963 34.615 0.00 0.00 35.80 2.83
603 604 6.596888 TGCATCTCCACAAAATCAAAAACAAA 59.403 30.769 0.00 0.00 0.00 2.83
604 605 7.120285 TGCATCTCCACAAAATCAAAAACAAAA 59.880 29.630 0.00 0.00 0.00 2.44
605 606 7.429051 GCATCTCCACAAAATCAAAAACAAAAC 59.571 33.333 0.00 0.00 0.00 2.43
606 607 8.667463 CATCTCCACAAAATCAAAAACAAAACT 58.333 29.630 0.00 0.00 0.00 2.66
607 608 9.883142 ATCTCCACAAAATCAAAAACAAAACTA 57.117 25.926 0.00 0.00 0.00 2.24
608 609 9.883142 TCTCCACAAAATCAAAAACAAAACTAT 57.117 25.926 0.00 0.00 0.00 2.12
609 610 9.919348 CTCCACAAAATCAAAAACAAAACTATG 57.081 29.630 0.00 0.00 0.00 2.23
610 611 9.658799 TCCACAAAATCAAAAACAAAACTATGA 57.341 25.926 0.00 0.00 0.00 2.15
621 622 9.893305 AAAAACAAAACTATGATACTTCTTCCG 57.107 29.630 0.00 0.00 0.00 4.30
622 623 8.617290 AAACAAAACTATGATACTTCTTCCGT 57.383 30.769 0.00 0.00 0.00 4.69
623 624 7.829378 ACAAAACTATGATACTTCTTCCGTC 57.171 36.000 0.00 0.00 0.00 4.79
624 625 6.817140 ACAAAACTATGATACTTCTTCCGTCC 59.183 38.462 0.00 0.00 0.00 4.79
625 626 6.793505 AAACTATGATACTTCTTCCGTCCT 57.206 37.500 0.00 0.00 0.00 3.85
626 627 7.893124 AAACTATGATACTTCTTCCGTCCTA 57.107 36.000 0.00 0.00 0.00 2.94
627 628 7.893124 AACTATGATACTTCTTCCGTCCTAA 57.107 36.000 0.00 0.00 0.00 2.69
628 629 7.893124 ACTATGATACTTCTTCCGTCCTAAA 57.107 36.000 0.00 0.00 0.00 1.85
629 630 8.302515 ACTATGATACTTCTTCCGTCCTAAAA 57.697 34.615 0.00 0.00 0.00 1.52
630 631 8.925338 ACTATGATACTTCTTCCGTCCTAAAAT 58.075 33.333 0.00 0.00 0.00 1.82
631 632 9.765795 CTATGATACTTCTTCCGTCCTAAAATT 57.234 33.333 0.00 0.00 0.00 1.82
633 634 8.857694 TGATACTTCTTCCGTCCTAAAATTTT 57.142 30.769 8.75 8.75 0.00 1.82
634 635 9.292195 TGATACTTCTTCCGTCCTAAAATTTTT 57.708 29.630 9.06 0.00 0.00 1.94
635 636 9.556030 GATACTTCTTCCGTCCTAAAATTTTTG 57.444 33.333 9.06 7.07 0.00 2.44
636 637 7.342769 ACTTCTTCCGTCCTAAAATTTTTGT 57.657 32.000 9.06 0.00 0.00 2.83
637 638 7.423199 ACTTCTTCCGTCCTAAAATTTTTGTC 58.577 34.615 9.06 2.40 0.00 3.18
638 639 6.321848 TCTTCCGTCCTAAAATTTTTGTCC 57.678 37.500 9.06 0.00 0.00 4.02
639 640 6.066032 TCTTCCGTCCTAAAATTTTTGTCCT 58.934 36.000 9.06 0.00 0.00 3.85
640 641 7.225725 TCTTCCGTCCTAAAATTTTTGTCCTA 58.774 34.615 9.06 0.00 0.00 2.94
641 642 7.720515 TCTTCCGTCCTAAAATTTTTGTCCTAA 59.279 33.333 9.06 0.00 0.00 2.69
642 643 7.820578 TCCGTCCTAAAATTTTTGTCCTAAA 57.179 32.000 9.06 0.00 0.00 1.85
643 644 8.411991 TCCGTCCTAAAATTTTTGTCCTAAAT 57.588 30.769 9.06 0.00 0.00 1.40
644 645 8.862085 TCCGTCCTAAAATTTTTGTCCTAAATT 58.138 29.630 9.06 0.00 36.91 1.82
645 646 9.483916 CCGTCCTAAAATTTTTGTCCTAAATTT 57.516 29.630 9.06 0.00 43.39 1.82
657 658 8.712285 TTTGTCCTAAATTTGTCTAGATACGG 57.288 34.615 0.00 0.00 0.00 4.02
658 659 7.649533 TGTCCTAAATTTGTCTAGATACGGA 57.350 36.000 0.00 0.00 0.00 4.69
659 660 8.246430 TGTCCTAAATTTGTCTAGATACGGAT 57.754 34.615 0.00 0.00 0.00 4.18
660 661 8.141909 TGTCCTAAATTTGTCTAGATACGGATG 58.858 37.037 0.00 0.00 0.00 3.51
661 662 8.142551 GTCCTAAATTTGTCTAGATACGGATGT 58.857 37.037 0.00 0.00 0.00 3.06
662 663 9.358406 TCCTAAATTTGTCTAGATACGGATGTA 57.642 33.333 0.00 0.00 34.45 2.29
670 671 9.740239 TTGTCTAGATACGGATGTATTTAACAC 57.260 33.333 0.00 0.00 41.37 3.32
671 672 9.128404 TGTCTAGATACGGATGTATTTAACACT 57.872 33.333 0.00 0.00 41.37 3.55
677 678 9.839589 GATACGGATGTATTTAACACTAAAACG 57.160 33.333 0.00 0.00 41.37 3.60
678 679 7.656707 ACGGATGTATTTAACACTAAAACGT 57.343 32.000 0.00 0.00 42.09 3.99
679 680 8.755696 ACGGATGTATTTAACACTAAAACGTA 57.244 30.769 0.00 0.00 42.09 3.57
680 681 9.202273 ACGGATGTATTTAACACTAAAACGTAA 57.798 29.630 0.00 0.00 42.09 3.18
681 682 9.464248 CGGATGTATTTAACACTAAAACGTAAC 57.536 33.333 0.00 0.00 42.09 2.50
693 694 9.282247 ACACTAAAACGTAACTAGATACATTCG 57.718 33.333 10.40 0.00 0.00 3.34
694 695 9.282247 CACTAAAACGTAACTAGATACATTCGT 57.718 33.333 10.40 0.16 0.00 3.85
717 718 9.917129 TCGTATTTACACAAATCTAAGACAAGA 57.083 29.630 0.00 0.00 35.88 3.02
725 726 8.912988 ACACAAATCTAAGACAAGAATTTTGGA 58.087 29.630 0.00 0.00 33.04 3.53
726 727 9.748708 CACAAATCTAAGACAAGAATTTTGGAA 57.251 29.630 0.00 0.00 33.04 3.53
727 728 9.750125 ACAAATCTAAGACAAGAATTTTGGAAC 57.250 29.630 0.00 0.00 33.04 3.62
728 729 8.905702 CAAATCTAAGACAAGAATTTTGGAACG 58.094 33.333 5.68 0.00 28.49 3.95
729 730 6.554334 TCTAAGACAAGAATTTTGGAACGG 57.446 37.500 0.00 0.00 0.00 4.44
730 731 6.292923 TCTAAGACAAGAATTTTGGAACGGA 58.707 36.000 0.00 0.00 0.00 4.69
731 732 5.438761 AAGACAAGAATTTTGGAACGGAG 57.561 39.130 0.00 0.00 0.00 4.63
732 733 3.821033 AGACAAGAATTTTGGAACGGAGG 59.179 43.478 0.00 0.00 0.00 4.30
733 734 2.890945 ACAAGAATTTTGGAACGGAGGG 59.109 45.455 0.00 0.00 0.00 4.30
734 735 3.153919 CAAGAATTTTGGAACGGAGGGA 58.846 45.455 0.00 0.00 0.00 4.20
735 736 3.073274 AGAATTTTGGAACGGAGGGAG 57.927 47.619 0.00 0.00 0.00 4.30
736 737 2.375509 AGAATTTTGGAACGGAGGGAGT 59.624 45.455 0.00 0.00 0.00 3.85
737 738 3.585732 AGAATTTTGGAACGGAGGGAGTA 59.414 43.478 0.00 0.00 0.00 2.59
738 739 4.227527 AGAATTTTGGAACGGAGGGAGTAT 59.772 41.667 0.00 0.00 0.00 2.12
739 740 5.427481 AGAATTTTGGAACGGAGGGAGTATA 59.573 40.000 0.00 0.00 0.00 1.47
740 741 5.703730 ATTTTGGAACGGAGGGAGTATAA 57.296 39.130 0.00 0.00 0.00 0.98
741 742 5.502089 TTTTGGAACGGAGGGAGTATAAA 57.498 39.130 0.00 0.00 0.00 1.40
742 743 5.502089 TTTGGAACGGAGGGAGTATAAAA 57.498 39.130 0.00 0.00 0.00 1.52
743 744 5.703730 TTGGAACGGAGGGAGTATAAAAT 57.296 39.130 0.00 0.00 0.00 1.82
744 745 5.703730 TGGAACGGAGGGAGTATAAAATT 57.296 39.130 0.00 0.00 0.00 1.82
745 746 5.433526 TGGAACGGAGGGAGTATAAAATTG 58.566 41.667 0.00 0.00 0.00 2.32
746 747 5.045432 TGGAACGGAGGGAGTATAAAATTGT 60.045 40.000 0.00 0.00 0.00 2.71
747 748 5.296035 GGAACGGAGGGAGTATAAAATTGTG 59.704 44.000 0.00 0.00 0.00 3.33
776 777 7.148507 TGTGTGTTTTTAAAACAGAAGGCAATG 60.149 33.333 21.60 0.00 0.00 2.82
777 778 6.314896 TGTGTTTTTAAAACAGAAGGCAATGG 59.685 34.615 21.60 0.00 0.00 3.16
800 805 6.945435 TGGTACACACATGAATAGATGGTTTT 59.055 34.615 0.00 0.00 0.00 2.43
893 961 6.844917 TGGAATAAAACTCTTTTTACCCCCAA 59.155 34.615 0.00 0.00 39.47 4.12
1762 1984 0.460284 ATTGCGCTGGTAGAAGTCGG 60.460 55.000 9.73 0.00 0.00 4.79
1784 2006 0.675837 CGGTGGTCAGAGAGGTCGTA 60.676 60.000 0.00 0.00 0.00 3.43
1843 2065 6.073548 GCCGATTGAGAGGTAAGATATTGTTG 60.074 42.308 0.00 0.00 0.00 3.33
1844 2066 6.986817 CCGATTGAGAGGTAAGATATTGTTGT 59.013 38.462 0.00 0.00 0.00 3.32
1901 2125 5.212934 TGAACGTCTATATGAGATTGTCGC 58.787 41.667 0.00 0.00 36.29 5.19
1907 2131 5.980116 GTCTATATGAGATTGTCGCTGTTGT 59.020 40.000 0.00 0.00 36.29 3.32
1910 2134 8.360390 TCTATATGAGATTGTCGCTGTTGTTAT 58.640 33.333 0.00 0.00 0.00 1.89
1911 2135 9.626045 CTATATGAGATTGTCGCTGTTGTTATA 57.374 33.333 0.00 0.00 0.00 0.98
1919 2143 8.619146 ATTGTCGCTGTTGTTATAATGATTTG 57.381 30.769 0.00 0.00 0.00 2.32
1980 2204 3.116096 AGCAACACTAGGAGGTGGATA 57.884 47.619 4.89 0.00 41.09 2.59
2002 2226 9.903682 GGATAGAATGATAATGTGTTGAATTGG 57.096 33.333 0.00 0.00 0.00 3.16
2107 2331 9.010029 ACAAGACACATAACAAAGTATAAAGGG 57.990 33.333 0.00 0.00 0.00 3.95
2130 2355 9.998106 AGGGTGTGTTATATACTTAATTGCTAG 57.002 33.333 0.00 0.00 0.00 3.42
2131 2356 9.774413 GGGTGTGTTATATACTTAATTGCTAGT 57.226 33.333 0.00 0.00 0.00 2.57
2154 2379 2.634982 TTGCACGGATGAAATTGCTC 57.365 45.000 0.00 0.00 35.91 4.26
2237 2462 3.134081 AGGTCGATGGTTTGGATATCGTT 59.866 43.478 0.00 0.00 42.96 3.85
2238 2463 3.875134 GGTCGATGGTTTGGATATCGTTT 59.125 43.478 0.00 0.00 42.96 3.60
2239 2464 4.334481 GGTCGATGGTTTGGATATCGTTTT 59.666 41.667 0.00 0.00 42.96 2.43
2299 2524 7.661127 AATTGCACACTTACTATGTCGTAAA 57.339 32.000 0.00 0.00 0.00 2.01
2305 2530 9.845305 GCACACTTACTATGTCGTAAATTATTC 57.155 33.333 0.00 0.00 0.00 1.75
2385 2610 5.278604 AGTCAAAAATTGAAGCACGGTAAC 58.721 37.500 0.00 0.00 42.15 2.50
2411 2636 7.964604 AGTAAAGTTAGTCAAATCAGGTCAC 57.035 36.000 0.00 0.00 0.00 3.67
2423 2648 4.998671 ATCAGGTCACTCAGACTACATG 57.001 45.455 0.00 0.00 46.72 3.21
2466 2691 9.745880 TGAGTTATTTAAGTCGGACTATTGATC 57.254 33.333 11.71 3.80 38.23 2.92
2483 2708 7.811236 ACTATTGATCTGTGTTGAAAAATGCAG 59.189 33.333 0.00 0.00 0.00 4.41
2503 2728 5.123820 TGCAGTGCATACTTGGAGTATTTTC 59.876 40.000 15.37 0.00 39.26 2.29
2507 2732 6.823689 AGTGCATACTTGGAGTATTTTCGAAT 59.176 34.615 0.00 0.00 39.26 3.34
2515 2740 9.284968 ACTTGGAGTATTTTCGAATAATATGGG 57.715 33.333 0.00 0.24 0.00 4.00
2733 2958 2.495155 TGTGTGCCACTATTCTGCAT 57.505 45.000 0.00 0.00 37.34 3.96
2747 2972 7.383572 CACTATTCTGCATGGTAACTAAGCTAG 59.616 40.741 0.00 0.00 37.61 3.42
2939 3164 4.919774 TCCACCTCCTATTGTTGCTAAA 57.080 40.909 0.00 0.00 0.00 1.85
2940 3165 5.249780 TCCACCTCCTATTGTTGCTAAAA 57.750 39.130 0.00 0.00 0.00 1.52
2941 3166 5.636123 TCCACCTCCTATTGTTGCTAAAAA 58.364 37.500 0.00 0.00 0.00 1.94
3040 3265 5.171476 TCGAGATCCAGCTTTTTCACTTAG 58.829 41.667 0.00 0.00 0.00 2.18
3203 3430 7.275341 ACGTATGTACCAAATTGCATGATTTTG 59.725 33.333 0.00 2.76 0.00 2.44
3244 3471 9.974980 AATGTTTTGTGTTATGTTAGGTTTAGG 57.025 29.630 0.00 0.00 0.00 2.69
3375 3604 8.844441 TGTAAAAGTTAAACTCAAATTGACCG 57.156 30.769 0.00 0.00 0.00 4.79
3441 3670 2.794350 GGTTTGAAGTCGGCATGTTTTG 59.206 45.455 0.00 0.00 0.00 2.44
3444 3673 1.336440 TGAAGTCGGCATGTTTTGGTG 59.664 47.619 0.00 0.00 0.00 4.17
3451 3680 1.142474 GCATGTTTTGGTGCAGAAGC 58.858 50.000 0.00 0.00 40.94 3.86
3563 3794 9.769093 CTTTCTATTTAAATTTGGTAGGACGTG 57.231 33.333 5.91 0.00 0.00 4.49
3570 3813 0.533308 TTGGTAGGACGTGCACCAAC 60.533 55.000 27.35 13.84 45.15 3.77
3606 3849 6.695292 AAAGCGATGATTTTGATTTGTGTC 57.305 33.333 0.00 0.00 0.00 3.67
3612 3855 6.309494 CGATGATTTTGATTTGTGTCTGCAAT 59.691 34.615 0.00 0.00 0.00 3.56
3613 3856 7.148705 CGATGATTTTGATTTGTGTCTGCAATT 60.149 33.333 0.00 0.00 0.00 2.32
3614 3857 7.789273 TGATTTTGATTTGTGTCTGCAATTT 57.211 28.000 0.00 0.00 0.00 1.82
3615 3858 8.211116 TGATTTTGATTTGTGTCTGCAATTTT 57.789 26.923 0.00 0.00 0.00 1.82
3753 3998 6.824305 TTCTCAAATCCTCAACCATCTTTC 57.176 37.500 0.00 0.00 0.00 2.62
3844 4089 7.346751 TCCTAGGCATGGTTCAATAATTTTC 57.653 36.000 2.96 0.00 0.00 2.29
3854 4099 9.783256 ATGGTTCAATAATTTTCTAGTTTACGC 57.217 29.630 0.00 0.00 0.00 4.42
4011 4260 0.537143 AACTCGCAAGCATGTTGGGA 60.537 50.000 19.14 19.14 38.74 4.37
4018 4267 2.517959 CAAGCATGTTGGGAAAGGAGA 58.482 47.619 0.00 0.00 0.00 3.71
4109 4410 0.039180 TCGGGCTCCAGTCTAGACAA 59.961 55.000 24.44 8.80 0.00 3.18
4110 4411 0.457851 CGGGCTCCAGTCTAGACAAG 59.542 60.000 24.44 17.89 0.00 3.16
4149 4450 1.904990 GAGGGGGAAGGACTGACAGC 61.905 65.000 1.25 0.00 0.00 4.40
4205 4509 0.252789 TTGGTCGGGGAAGATGGGTA 60.253 55.000 0.00 0.00 0.00 3.69
4254 4558 4.410400 CGGGAGAAGGCCGCCTTT 62.410 66.667 25.55 15.09 44.82 3.11
4268 4572 2.342179 CGCCTTTCTCTCCTCTGTTTC 58.658 52.381 0.00 0.00 0.00 2.78
4271 4575 1.989165 CTTTCTCTCCTCTGTTTCGCG 59.011 52.381 0.00 0.00 0.00 5.87
4291 4595 1.841556 ACCCCGCTCTCCTTTGTCA 60.842 57.895 0.00 0.00 0.00 3.58
4373 4688 1.949631 GCGCGCCTATGAGTACACC 60.950 63.158 23.24 0.00 0.00 4.16
4380 4695 3.131577 CGCCTATGAGTACACCCAGTTTA 59.868 47.826 0.00 0.00 0.00 2.01
4427 4742 7.876936 ATTTACATGTTGATCAGAGAATGCT 57.123 32.000 2.30 0.00 0.00 3.79
4428 4743 8.969260 ATTTACATGTTGATCAGAGAATGCTA 57.031 30.769 2.30 0.00 0.00 3.49
4429 4744 7.776933 TTACATGTTGATCAGAGAATGCTAC 57.223 36.000 2.30 0.00 0.00 3.58
4430 4745 5.987098 ACATGTTGATCAGAGAATGCTACT 58.013 37.500 0.00 0.00 0.00 2.57
4431 4746 6.413052 ACATGTTGATCAGAGAATGCTACTT 58.587 36.000 0.00 0.00 0.00 2.24
4432 4747 6.883217 ACATGTTGATCAGAGAATGCTACTTT 59.117 34.615 0.00 0.00 0.00 2.66
4433 4748 6.732531 TGTTGATCAGAGAATGCTACTTTG 57.267 37.500 0.00 0.00 0.00 2.77
4434 4749 6.466812 TGTTGATCAGAGAATGCTACTTTGA 58.533 36.000 0.00 0.00 34.09 2.69
4435 4750 6.936335 TGTTGATCAGAGAATGCTACTTTGAA 59.064 34.615 0.00 0.00 33.49 2.69
4436 4751 7.118825 TGTTGATCAGAGAATGCTACTTTGAAG 59.881 37.037 0.00 0.00 33.49 3.02
4437 4752 6.939622 TGATCAGAGAATGCTACTTTGAAGA 58.060 36.000 0.00 0.00 33.49 2.87
4438 4753 6.815641 TGATCAGAGAATGCTACTTTGAAGAC 59.184 38.462 0.00 0.00 33.49 3.01
4439 4754 6.101650 TCAGAGAATGCTACTTTGAAGACA 57.898 37.500 0.00 0.00 0.00 3.41
4440 4755 6.705302 TCAGAGAATGCTACTTTGAAGACAT 58.295 36.000 0.00 0.00 0.00 3.06
4441 4756 7.840931 TCAGAGAATGCTACTTTGAAGACATA 58.159 34.615 0.00 0.00 0.00 2.29
4442 4757 8.481314 TCAGAGAATGCTACTTTGAAGACATAT 58.519 33.333 0.00 0.00 0.00 1.78
4443 4758 9.107177 CAGAGAATGCTACTTTGAAGACATATT 57.893 33.333 0.00 0.00 0.00 1.28
4444 4759 9.323985 AGAGAATGCTACTTTGAAGACATATTC 57.676 33.333 0.00 0.00 0.00 1.75
4445 4760 9.102757 GAGAATGCTACTTTGAAGACATATTCA 57.897 33.333 0.00 0.00 37.41 2.57
4446 4761 9.107177 AGAATGCTACTTTGAAGACATATTCAG 57.893 33.333 0.00 0.00 40.16 3.02
4447 4762 6.668541 TGCTACTTTGAAGACATATTCAGC 57.331 37.500 0.00 0.00 40.16 4.26
4448 4763 6.172630 TGCTACTTTGAAGACATATTCAGCA 58.827 36.000 0.00 0.00 40.16 4.41
4449 4764 6.314648 TGCTACTTTGAAGACATATTCAGCAG 59.685 38.462 0.00 0.00 40.16 4.24
4450 4765 6.536582 GCTACTTTGAAGACATATTCAGCAGA 59.463 38.462 0.00 0.00 40.16 4.26
4451 4766 7.065085 GCTACTTTGAAGACATATTCAGCAGAA 59.935 37.037 0.00 0.00 40.16 3.02
4452 4767 7.375106 ACTTTGAAGACATATTCAGCAGAAG 57.625 36.000 0.00 2.35 40.16 2.85
4453 4768 5.808042 TTGAAGACATATTCAGCAGAAGC 57.192 39.130 0.00 0.00 40.16 3.86
4454 4769 4.835678 TGAAGACATATTCAGCAGAAGCA 58.164 39.130 0.00 0.00 45.49 3.91
4455 4770 4.633126 TGAAGACATATTCAGCAGAAGCAC 59.367 41.667 0.00 0.00 45.49 4.40
4456 4771 3.193263 AGACATATTCAGCAGAAGCACG 58.807 45.455 0.00 0.00 45.49 5.34
4523 4838 9.077674 TGTTGTTGTAATTTGTACAATGTGAAC 57.922 29.630 9.56 9.47 39.30 3.18
4552 4888 5.104235 TCCTGGATGGGCATCATAATGATAG 60.104 44.000 0.00 0.00 39.54 2.08
4571 4907 0.106819 GCATGGGCATCTCCTTGTCT 60.107 55.000 0.00 0.00 40.72 3.41
4732 5068 7.506328 ACTTCATAAACTGAAACTGTTACCC 57.494 36.000 0.00 0.00 43.20 3.69
4764 5100 7.083875 AGTTTATGTAATGAATGGTCGGTTG 57.916 36.000 0.00 0.00 0.00 3.77
4812 5148 0.164002 GCTCTTGTCGTCTTTTCGGC 59.836 55.000 0.00 0.00 35.91 5.54
4832 5200 0.888619 CTCCAGGACTGTTCGCTGTA 59.111 55.000 0.00 0.00 0.00 2.74
4864 5232 6.318648 TGGGTAGTTGTAATTGATGCTTCATC 59.681 38.462 2.75 0.13 40.88 2.92
4871 5239 6.413892 TGTAATTGATGCTTCATCCTGTACA 58.586 36.000 2.75 0.00 39.87 2.90
4874 5242 3.261580 TGATGCTTCATCCTGTACAACG 58.738 45.455 0.00 0.00 39.87 4.10
4876 5244 3.610040 TGCTTCATCCTGTACAACGAT 57.390 42.857 0.00 0.00 0.00 3.73
4877 5245 4.729227 TGCTTCATCCTGTACAACGATA 57.271 40.909 0.00 0.00 0.00 2.92
4878 5246 5.276461 TGCTTCATCCTGTACAACGATAT 57.724 39.130 0.00 0.00 0.00 1.63
4879 5247 5.670485 TGCTTCATCCTGTACAACGATATT 58.330 37.500 0.00 0.00 0.00 1.28
4880 5248 6.112734 TGCTTCATCCTGTACAACGATATTT 58.887 36.000 0.00 0.00 0.00 1.40
4881 5249 6.597672 TGCTTCATCCTGTACAACGATATTTT 59.402 34.615 0.00 0.00 0.00 1.82
4882 5250 7.120579 TGCTTCATCCTGTACAACGATATTTTT 59.879 33.333 0.00 0.00 0.00 1.94
4883 5251 7.429340 GCTTCATCCTGTACAACGATATTTTTG 59.571 37.037 0.00 0.00 0.00 2.44
4884 5252 8.554835 TTCATCCTGTACAACGATATTTTTGA 57.445 30.769 0.00 0.00 0.00 2.69
4885 5253 8.554835 TCATCCTGTACAACGATATTTTTGAA 57.445 30.769 0.00 0.00 0.00 2.69
4886 5254 9.004717 TCATCCTGTACAACGATATTTTTGAAA 57.995 29.630 0.00 0.00 0.00 2.69
4887 5255 9.277565 CATCCTGTACAACGATATTTTTGAAAG 57.722 33.333 0.00 0.65 0.00 2.62
4888 5256 8.385898 TCCTGTACAACGATATTTTTGAAAGT 57.614 30.769 0.00 0.00 0.00 2.66
4889 5257 8.286800 TCCTGTACAACGATATTTTTGAAAGTG 58.713 33.333 0.00 0.00 0.00 3.16
4890 5258 8.286800 CCTGTACAACGATATTTTTGAAAGTGA 58.713 33.333 0.00 0.00 0.00 3.41
4891 5259 8.996988 TGTACAACGATATTTTTGAAAGTGAC 57.003 30.769 0.00 0.00 0.00 3.67
4892 5260 8.613482 TGTACAACGATATTTTTGAAAGTGACA 58.387 29.630 0.00 0.00 0.00 3.58
4893 5261 9.607285 GTACAACGATATTTTTGAAAGTGACAT 57.393 29.630 0.00 0.00 0.00 3.06
4895 5263 9.528018 ACAACGATATTTTTGAAAGTGACATTT 57.472 25.926 0.00 0.00 0.00 2.32
4969 5337 3.501445 GCTGATTTGAAGTGCTTGACTCT 59.499 43.478 0.00 0.00 31.73 3.24
5163 5546 4.813161 CAGTAGGCACCTTCATATCAGTTG 59.187 45.833 0.00 0.00 0.00 3.16
5437 5845 1.375908 GATTGCACTGAGGACGCCA 60.376 57.895 0.00 0.00 0.00 5.69
5438 5846 0.745845 GATTGCACTGAGGACGCCAT 60.746 55.000 0.00 0.00 0.00 4.40
5526 5934 1.874345 CGACACCAACCCTAGACGCT 61.874 60.000 0.00 0.00 0.00 5.07
5682 6091 2.551270 AGGCTCACTCAAATCCCACTA 58.449 47.619 0.00 0.00 0.00 2.74
5757 6167 1.215924 CCCCCGGCTCCCTAAATTTTA 59.784 52.381 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 4.074526 TGCTCGAGCCTGCTGGTC 62.075 66.667 33.23 4.42 41.18 4.02
87 88 4.079850 CTGCTCGAGCCTGCTGGT 62.080 66.667 33.23 0.00 41.18 4.00
110 111 2.000825 GATTCTTGGGCTCCCCTCCC 62.001 65.000 1.89 0.00 45.70 4.30
111 112 1.534203 GATTCTTGGGCTCCCCTCC 59.466 63.158 1.89 0.00 45.70 4.30
112 113 1.147153 CGATTCTTGGGCTCCCCTC 59.853 63.158 1.89 0.00 45.70 4.30
113 114 3.049080 GCGATTCTTGGGCTCCCCT 62.049 63.158 1.89 0.00 45.70 4.79
114 115 2.517166 GCGATTCTTGGGCTCCCC 60.517 66.667 1.89 0.00 45.71 4.81
115 116 2.517166 GGCGATTCTTGGGCTCCC 60.517 66.667 0.00 0.00 0.00 4.30
116 117 2.897350 CGGCGATTCTTGGGCTCC 60.897 66.667 0.00 0.00 0.00 4.70
117 118 2.869503 TTCCGGCGATTCTTGGGCTC 62.870 60.000 9.30 0.00 0.00 4.70
118 119 2.876368 CTTCCGGCGATTCTTGGGCT 62.876 60.000 9.30 0.00 0.00 5.19
119 120 2.437716 TTCCGGCGATTCTTGGGC 60.438 61.111 9.30 0.00 0.00 5.36
120 121 1.819632 CCTTCCGGCGATTCTTGGG 60.820 63.158 9.30 0.00 0.00 4.12
121 122 1.819632 CCCTTCCGGCGATTCTTGG 60.820 63.158 9.30 1.26 0.00 3.61
122 123 1.819632 CCCCTTCCGGCGATTCTTG 60.820 63.158 9.30 0.00 0.00 3.02
123 124 1.993391 TCCCCTTCCGGCGATTCTT 60.993 57.895 9.30 0.00 0.00 2.52
124 125 2.365105 TCCCCTTCCGGCGATTCT 60.365 61.111 9.30 0.00 0.00 2.40
125 126 2.203029 GTCCCCTTCCGGCGATTC 60.203 66.667 9.30 0.00 0.00 2.52
126 127 3.793888 GGTCCCCTTCCGGCGATT 61.794 66.667 9.30 0.00 0.00 3.34
131 132 3.459063 GACTCGGTCCCCTTCCGG 61.459 72.222 0.00 0.00 46.82 5.14
133 134 4.144703 GCGACTCGGTCCCCTTCC 62.145 72.222 0.00 0.00 0.00 3.46
134 135 4.493747 CGCGACTCGGTCCCCTTC 62.494 72.222 0.00 0.00 33.78 3.46
143 144 4.735132 TCCTTTGCCCGCGACTCG 62.735 66.667 8.23 0.00 38.08 4.18
144 145 2.815647 CTCCTTTGCCCGCGACTC 60.816 66.667 8.23 0.00 0.00 3.36
145 146 4.394712 CCTCCTTTGCCCGCGACT 62.395 66.667 8.23 0.00 0.00 4.18
149 150 4.803908 CTCCCCTCCTTTGCCCGC 62.804 72.222 0.00 0.00 0.00 6.13
150 151 4.115199 CCTCCCCTCCTTTGCCCG 62.115 72.222 0.00 0.00 0.00 6.13
151 152 4.448976 GCCTCCCCTCCTTTGCCC 62.449 72.222 0.00 0.00 0.00 5.36
152 153 4.803908 CGCCTCCCCTCCTTTGCC 62.804 72.222 0.00 0.00 0.00 4.52
153 154 4.035102 ACGCCTCCCCTCCTTTGC 62.035 66.667 0.00 0.00 0.00 3.68
154 155 2.045926 CACGCCTCCCCTCCTTTG 60.046 66.667 0.00 0.00 0.00 2.77
155 156 2.529389 ACACGCCTCCCCTCCTTT 60.529 61.111 0.00 0.00 0.00 3.11
156 157 3.322466 CACACGCCTCCCCTCCTT 61.322 66.667 0.00 0.00 0.00 3.36
165 166 4.974438 TTCCCTCCCCACACGCCT 62.974 66.667 0.00 0.00 0.00 5.52
166 167 3.920093 CTTTCCCTCCCCACACGCC 62.920 68.421 0.00 0.00 0.00 5.68
167 168 2.359975 CTTTCCCTCCCCACACGC 60.360 66.667 0.00 0.00 0.00 5.34
168 169 2.359975 GCTTTCCCTCCCCACACG 60.360 66.667 0.00 0.00 0.00 4.49
169 170 1.303643 CAGCTTTCCCTCCCCACAC 60.304 63.158 0.00 0.00 0.00 3.82
170 171 3.170362 CAGCTTTCCCTCCCCACA 58.830 61.111 0.00 0.00 0.00 4.17
171 172 2.361737 GCAGCTTTCCCTCCCCAC 60.362 66.667 0.00 0.00 0.00 4.61
172 173 4.033776 CGCAGCTTTCCCTCCCCA 62.034 66.667 0.00 0.00 0.00 4.96
173 174 4.803908 CCGCAGCTTTCCCTCCCC 62.804 72.222 0.00 0.00 0.00 4.81
250 251 2.040464 GATCCAGCCTCCCCAGGA 60.040 66.667 0.00 0.00 43.65 3.86
251 252 3.174265 GGATCCAGCCTCCCCAGG 61.174 72.222 6.95 0.00 43.82 4.45
252 253 3.554342 CGGATCCAGCCTCCCCAG 61.554 72.222 13.41 0.00 0.00 4.45
270 271 3.411351 CTGTTGGTTCGACGGCGG 61.411 66.667 12.58 0.00 38.28 6.13
271 272 3.411351 CCTGTTGGTTCGACGGCG 61.411 66.667 2.87 2.87 39.35 6.46
272 273 3.047877 CCCTGTTGGTTCGACGGC 61.048 66.667 0.00 0.00 0.00 5.68
273 274 2.358247 CCCCTGTTGGTTCGACGG 60.358 66.667 0.00 0.00 0.00 4.79
274 275 2.358247 CCCCCTGTTGGTTCGACG 60.358 66.667 0.00 0.00 0.00 5.12
275 276 1.003718 CTCCCCCTGTTGGTTCGAC 60.004 63.158 0.00 0.00 0.00 4.20
276 277 2.221299 CCTCCCCCTGTTGGTTCGA 61.221 63.158 0.00 0.00 0.00 3.71
277 278 2.351276 CCTCCCCCTGTTGGTTCG 59.649 66.667 0.00 0.00 0.00 3.95
278 279 2.763902 CCCTCCCCCTGTTGGTTC 59.236 66.667 0.00 0.00 0.00 3.62
279 280 3.590574 GCCCTCCCCCTGTTGGTT 61.591 66.667 0.00 0.00 0.00 3.67
307 308 4.016706 AACGCCCACCCCTCTTCG 62.017 66.667 0.00 0.00 0.00 3.79
308 309 2.359975 CAACGCCCACCCCTCTTC 60.360 66.667 0.00 0.00 0.00 2.87
309 310 3.966543 CCAACGCCCACCCCTCTT 61.967 66.667 0.00 0.00 0.00 2.85
357 358 4.722700 CGTGCCCCAGGAAGGTGG 62.723 72.222 0.00 0.00 37.34 4.61
358 359 4.722700 CCGTGCCCCAGGAAGGTG 62.723 72.222 0.00 0.00 34.66 4.00
403 404 3.426309 TACTAGGAGCCCCCGTCGG 62.426 68.421 3.60 3.60 40.87 4.79
404 405 1.897615 CTACTAGGAGCCCCCGTCG 60.898 68.421 0.00 0.00 40.87 5.12
405 406 2.201708 GCTACTAGGAGCCCCCGTC 61.202 68.421 16.87 0.00 40.87 4.79
406 407 2.123382 GCTACTAGGAGCCCCCGT 60.123 66.667 16.87 0.00 40.87 5.28
407 408 3.296054 CGCTACTAGGAGCCCCCG 61.296 72.222 21.58 3.11 39.43 5.73
408 409 2.918276 CCGCTACTAGGAGCCCCC 60.918 72.222 21.58 0.00 39.43 5.40
409 410 3.617735 GCCGCTACTAGGAGCCCC 61.618 72.222 21.58 8.52 39.43 5.80
410 411 3.979739 CGCCGCTACTAGGAGCCC 61.980 72.222 21.58 11.44 39.43 5.19
411 412 3.979739 CCGCCGCTACTAGGAGCC 61.980 72.222 21.58 7.26 39.43 4.70
412 413 4.649310 GCCGCCGCTACTAGGAGC 62.649 72.222 17.74 17.74 39.20 4.70
413 414 1.579084 CTAGCCGCCGCTACTAGGAG 61.579 65.000 2.40 0.00 46.08 3.69
414 415 1.600076 CTAGCCGCCGCTACTAGGA 60.600 63.158 2.40 0.00 46.08 2.94
415 416 2.627737 CCTAGCCGCCGCTACTAGG 61.628 68.421 16.77 16.77 46.08 3.02
416 417 2.627737 CCCTAGCCGCCGCTACTAG 61.628 68.421 2.40 8.77 46.08 2.57
417 418 2.596631 CCCTAGCCGCCGCTACTA 60.597 66.667 2.40 0.00 46.08 1.82
418 419 4.835891 ACCCTAGCCGCCGCTACT 62.836 66.667 2.40 0.00 46.08 2.57
419 420 3.786901 GAACCCTAGCCGCCGCTAC 62.787 68.421 2.40 0.00 46.08 3.58
420 421 3.534056 GAACCCTAGCCGCCGCTA 61.534 66.667 6.60 6.60 46.08 4.26
439 440 4.135153 CTCCTCTGGCGACACGGG 62.135 72.222 0.00 0.00 35.60 5.28
440 441 4.135153 CCTCCTCTGGCGACACGG 62.135 72.222 0.00 0.00 35.60 4.94
441 442 4.135153 CCCTCCTCTGGCGACACG 62.135 72.222 0.00 0.00 35.60 4.49
442 443 2.997897 ACCCTCCTCTGGCGACAC 60.998 66.667 0.00 0.00 35.60 3.67
443 444 2.997315 CACCCTCCTCTGGCGACA 60.997 66.667 0.00 0.00 39.59 4.35
444 445 2.680352 TCACCCTCCTCTGGCGAC 60.680 66.667 0.00 0.00 0.00 5.19
445 446 2.680352 GTCACCCTCCTCTGGCGA 60.680 66.667 0.00 0.00 0.00 5.54
446 447 4.135153 CGTCACCCTCCTCTGGCG 62.135 72.222 0.00 0.00 0.00 5.69
447 448 4.459089 GCGTCACCCTCCTCTGGC 62.459 72.222 0.00 0.00 0.00 4.85
448 449 4.135153 CGCGTCACCCTCCTCTGG 62.135 72.222 0.00 0.00 0.00 3.86
449 450 4.135153 CCGCGTCACCCTCCTCTG 62.135 72.222 4.92 0.00 0.00 3.35
480 481 2.361104 TCAAGAACATGCGCCCCC 60.361 61.111 4.18 0.00 0.00 5.40
481 482 2.409870 CCTCAAGAACATGCGCCCC 61.410 63.158 4.18 0.00 0.00 5.80
482 483 0.749454 ATCCTCAAGAACATGCGCCC 60.749 55.000 4.18 0.00 0.00 6.13
483 484 1.953559 TATCCTCAAGAACATGCGCC 58.046 50.000 4.18 0.00 0.00 6.53
484 485 5.869753 ATTATATCCTCAAGAACATGCGC 57.130 39.130 0.00 0.00 0.00 6.09
485 486 7.194607 ACAATTATATCCTCAAGAACATGCG 57.805 36.000 0.00 0.00 0.00 4.73
486 487 7.293745 CGACAATTATATCCTCAAGAACATGC 58.706 38.462 0.00 0.00 0.00 4.06
487 488 7.172190 AGCGACAATTATATCCTCAAGAACATG 59.828 37.037 0.00 0.00 0.00 3.21
488 489 7.220030 AGCGACAATTATATCCTCAAGAACAT 58.780 34.615 0.00 0.00 0.00 2.71
489 490 6.582636 AGCGACAATTATATCCTCAAGAACA 58.417 36.000 0.00 0.00 0.00 3.18
490 491 7.868415 AGTAGCGACAATTATATCCTCAAGAAC 59.132 37.037 0.00 0.00 0.00 3.01
491 492 7.952671 AGTAGCGACAATTATATCCTCAAGAA 58.047 34.615 0.00 0.00 0.00 2.52
492 493 7.526142 AGTAGCGACAATTATATCCTCAAGA 57.474 36.000 0.00 0.00 0.00 3.02
493 494 8.594881 AAAGTAGCGACAATTATATCCTCAAG 57.405 34.615 0.00 0.00 0.00 3.02
494 495 9.692749 CTAAAGTAGCGACAATTATATCCTCAA 57.307 33.333 0.00 0.00 0.00 3.02
495 496 8.857098 ACTAAAGTAGCGACAATTATATCCTCA 58.143 33.333 0.00 0.00 0.00 3.86
563 564 4.154195 GGAGATGCACTGATACGTGTTTTT 59.846 41.667 0.00 0.00 37.24 1.94
564 565 3.684788 GGAGATGCACTGATACGTGTTTT 59.315 43.478 0.00 0.00 37.24 2.43
565 566 3.262420 GGAGATGCACTGATACGTGTTT 58.738 45.455 0.00 0.00 37.24 2.83
566 567 2.233676 TGGAGATGCACTGATACGTGTT 59.766 45.455 0.00 0.00 37.24 3.32
567 568 1.824852 TGGAGATGCACTGATACGTGT 59.175 47.619 0.00 0.00 37.24 4.49
568 569 2.196749 GTGGAGATGCACTGATACGTG 58.803 52.381 0.00 0.00 37.94 4.49
569 570 1.824852 TGTGGAGATGCACTGATACGT 59.175 47.619 6.05 0.00 0.00 3.57
570 571 2.584492 TGTGGAGATGCACTGATACG 57.416 50.000 6.05 0.00 0.00 3.06
571 572 5.355071 TGATTTTGTGGAGATGCACTGATAC 59.645 40.000 6.05 0.00 0.00 2.24
572 573 5.499313 TGATTTTGTGGAGATGCACTGATA 58.501 37.500 6.05 0.00 0.00 2.15
573 574 4.338012 TGATTTTGTGGAGATGCACTGAT 58.662 39.130 6.05 0.00 0.00 2.90
574 575 3.753815 TGATTTTGTGGAGATGCACTGA 58.246 40.909 6.05 0.00 0.00 3.41
575 576 4.508461 TTGATTTTGTGGAGATGCACTG 57.492 40.909 6.05 0.00 0.00 3.66
576 577 5.534207 TTTTGATTTTGTGGAGATGCACT 57.466 34.783 6.05 0.00 0.00 4.40
577 578 5.523188 TGTTTTTGATTTTGTGGAGATGCAC 59.477 36.000 0.00 0.00 0.00 4.57
578 579 5.668471 TGTTTTTGATTTTGTGGAGATGCA 58.332 33.333 0.00 0.00 0.00 3.96
579 580 6.601741 TTGTTTTTGATTTTGTGGAGATGC 57.398 33.333 0.00 0.00 0.00 3.91
580 581 8.667463 AGTTTTGTTTTTGATTTTGTGGAGATG 58.333 29.630 0.00 0.00 0.00 2.90
581 582 8.791327 AGTTTTGTTTTTGATTTTGTGGAGAT 57.209 26.923 0.00 0.00 0.00 2.75
582 583 9.883142 ATAGTTTTGTTTTTGATTTTGTGGAGA 57.117 25.926 0.00 0.00 0.00 3.71
583 584 9.919348 CATAGTTTTGTTTTTGATTTTGTGGAG 57.081 29.630 0.00 0.00 0.00 3.86
584 585 9.658799 TCATAGTTTTGTTTTTGATTTTGTGGA 57.341 25.926 0.00 0.00 0.00 4.02
595 596 9.893305 CGGAAGAAGTATCATAGTTTTGTTTTT 57.107 29.630 0.00 0.00 0.00 1.94
596 597 9.063615 ACGGAAGAAGTATCATAGTTTTGTTTT 57.936 29.630 0.00 0.00 0.00 2.43
597 598 8.617290 ACGGAAGAAGTATCATAGTTTTGTTT 57.383 30.769 0.00 0.00 0.00 2.83
598 599 7.333672 GGACGGAAGAAGTATCATAGTTTTGTT 59.666 37.037 0.00 0.00 0.00 2.83
599 600 6.817140 GGACGGAAGAAGTATCATAGTTTTGT 59.183 38.462 0.00 0.00 0.00 2.83
600 601 7.042335 AGGACGGAAGAAGTATCATAGTTTTG 58.958 38.462 0.00 0.00 0.00 2.44
601 602 7.184067 AGGACGGAAGAAGTATCATAGTTTT 57.816 36.000 0.00 0.00 0.00 2.43
602 603 6.793505 AGGACGGAAGAAGTATCATAGTTT 57.206 37.500 0.00 0.00 0.00 2.66
603 604 7.893124 TTAGGACGGAAGAAGTATCATAGTT 57.107 36.000 0.00 0.00 0.00 2.24
604 605 7.893124 TTTAGGACGGAAGAAGTATCATAGT 57.107 36.000 0.00 0.00 0.00 2.12
605 606 9.765795 AATTTTAGGACGGAAGAAGTATCATAG 57.234 33.333 0.00 0.00 0.00 2.23
607 608 9.462606 AAAATTTTAGGACGGAAGAAGTATCAT 57.537 29.630 0.37 0.00 0.00 2.45
608 609 8.857694 AAAATTTTAGGACGGAAGAAGTATCA 57.142 30.769 0.37 0.00 0.00 2.15
609 610 9.556030 CAAAAATTTTAGGACGGAAGAAGTATC 57.444 33.333 3.34 0.00 0.00 2.24
610 611 9.074576 ACAAAAATTTTAGGACGGAAGAAGTAT 57.925 29.630 3.34 0.00 0.00 2.12
611 612 8.454570 ACAAAAATTTTAGGACGGAAGAAGTA 57.545 30.769 3.34 0.00 0.00 2.24
612 613 7.342769 ACAAAAATTTTAGGACGGAAGAAGT 57.657 32.000 3.34 0.00 0.00 3.01
613 614 6.861572 GGACAAAAATTTTAGGACGGAAGAAG 59.138 38.462 3.34 0.00 0.00 2.85
614 615 6.548251 AGGACAAAAATTTTAGGACGGAAGAA 59.452 34.615 3.34 0.00 0.00 2.52
615 616 6.066032 AGGACAAAAATTTTAGGACGGAAGA 58.934 36.000 3.34 0.00 0.00 2.87
616 617 6.327279 AGGACAAAAATTTTAGGACGGAAG 57.673 37.500 3.34 0.00 0.00 3.46
617 618 7.820578 TTAGGACAAAAATTTTAGGACGGAA 57.179 32.000 3.34 0.00 0.00 4.30
618 619 7.820578 TTTAGGACAAAAATTTTAGGACGGA 57.179 32.000 3.34 0.00 0.00 4.69
619 620 9.483916 AAATTTAGGACAAAAATTTTAGGACGG 57.516 29.630 3.34 0.00 41.45 4.79
631 632 9.158233 CCGTATCTAGACAAATTTAGGACAAAA 57.842 33.333 0.00 0.00 0.00 2.44
632 633 8.533657 TCCGTATCTAGACAAATTTAGGACAAA 58.466 33.333 0.00 0.00 0.00 2.83
633 634 8.070034 TCCGTATCTAGACAAATTTAGGACAA 57.930 34.615 0.00 0.00 0.00 3.18
634 635 7.649533 TCCGTATCTAGACAAATTTAGGACA 57.350 36.000 0.00 0.00 0.00 4.02
635 636 8.142551 ACATCCGTATCTAGACAAATTTAGGAC 58.857 37.037 0.00 0.00 0.00 3.85
636 637 8.246430 ACATCCGTATCTAGACAAATTTAGGA 57.754 34.615 0.00 0.00 0.00 2.94
644 645 9.740239 GTGTTAAATACATCCGTATCTAGACAA 57.260 33.333 0.00 0.00 37.34 3.18
645 646 9.128404 AGTGTTAAATACATCCGTATCTAGACA 57.872 33.333 0.00 0.00 37.34 3.41
651 652 9.839589 CGTTTTAGTGTTAAATACATCCGTATC 57.160 33.333 0.00 0.00 37.34 2.24
652 653 9.369904 ACGTTTTAGTGTTAAATACATCCGTAT 57.630 29.630 0.00 0.00 40.15 3.06
653 654 8.755696 ACGTTTTAGTGTTAAATACATCCGTA 57.244 30.769 0.00 0.00 39.39 4.02
654 655 7.656707 ACGTTTTAGTGTTAAATACATCCGT 57.343 32.000 0.00 0.00 39.39 4.69
655 656 9.464248 GTTACGTTTTAGTGTTAAATACATCCG 57.536 33.333 0.00 0.00 39.39 4.18
667 668 9.282247 CGAATGTATCTAGTTACGTTTTAGTGT 57.718 33.333 16.10 0.00 32.74 3.55
668 669 9.282247 ACGAATGTATCTAGTTACGTTTTAGTG 57.718 33.333 16.10 9.13 32.74 2.74
691 692 9.917129 TCTTGTCTTAGATTTGTGTAAATACGA 57.083 29.630 0.00 0.00 36.66 3.43
699 700 8.912988 TCCAAAATTCTTGTCTTAGATTTGTGT 58.087 29.630 0.00 0.00 28.79 3.72
700 701 9.748708 TTCCAAAATTCTTGTCTTAGATTTGTG 57.251 29.630 0.00 0.00 28.79 3.33
701 702 9.750125 GTTCCAAAATTCTTGTCTTAGATTTGT 57.250 29.630 0.00 0.00 28.79 2.83
702 703 8.905702 CGTTCCAAAATTCTTGTCTTAGATTTG 58.094 33.333 0.00 0.00 29.84 2.32
703 704 8.082242 CCGTTCCAAAATTCTTGTCTTAGATTT 58.918 33.333 0.00 0.00 0.00 2.17
704 705 7.447238 TCCGTTCCAAAATTCTTGTCTTAGATT 59.553 33.333 0.00 0.00 0.00 2.40
705 706 6.940298 TCCGTTCCAAAATTCTTGTCTTAGAT 59.060 34.615 0.00 0.00 0.00 1.98
706 707 6.292923 TCCGTTCCAAAATTCTTGTCTTAGA 58.707 36.000 0.00 0.00 0.00 2.10
707 708 6.348540 CCTCCGTTCCAAAATTCTTGTCTTAG 60.349 42.308 0.00 0.00 0.00 2.18
708 709 5.472137 CCTCCGTTCCAAAATTCTTGTCTTA 59.528 40.000 0.00 0.00 0.00 2.10
709 710 4.278419 CCTCCGTTCCAAAATTCTTGTCTT 59.722 41.667 0.00 0.00 0.00 3.01
710 711 3.821033 CCTCCGTTCCAAAATTCTTGTCT 59.179 43.478 0.00 0.00 0.00 3.41
711 712 3.057526 CCCTCCGTTCCAAAATTCTTGTC 60.058 47.826 0.00 0.00 0.00 3.18
712 713 2.890945 CCCTCCGTTCCAAAATTCTTGT 59.109 45.455 0.00 0.00 0.00 3.16
713 714 3.153919 TCCCTCCGTTCCAAAATTCTTG 58.846 45.455 0.00 0.00 0.00 3.02
714 715 3.181433 ACTCCCTCCGTTCCAAAATTCTT 60.181 43.478 0.00 0.00 0.00 2.52
715 716 2.375509 ACTCCCTCCGTTCCAAAATTCT 59.624 45.455 0.00 0.00 0.00 2.40
716 717 2.791655 ACTCCCTCCGTTCCAAAATTC 58.208 47.619 0.00 0.00 0.00 2.17
717 718 2.971901 ACTCCCTCCGTTCCAAAATT 57.028 45.000 0.00 0.00 0.00 1.82
718 719 5.703730 TTATACTCCCTCCGTTCCAAAAT 57.296 39.130 0.00 0.00 0.00 1.82
719 720 5.502089 TTTATACTCCCTCCGTTCCAAAA 57.498 39.130 0.00 0.00 0.00 2.44
720 721 5.502089 TTTTATACTCCCTCCGTTCCAAA 57.498 39.130 0.00 0.00 0.00 3.28
721 722 5.703730 ATTTTATACTCCCTCCGTTCCAA 57.296 39.130 0.00 0.00 0.00 3.53
722 723 5.045432 ACAATTTTATACTCCCTCCGTTCCA 60.045 40.000 0.00 0.00 0.00 3.53
723 724 5.296035 CACAATTTTATACTCCCTCCGTTCC 59.704 44.000 0.00 0.00 0.00 3.62
724 725 5.878669 ACACAATTTTATACTCCCTCCGTTC 59.121 40.000 0.00 0.00 0.00 3.95
725 726 5.812286 ACACAATTTTATACTCCCTCCGTT 58.188 37.500 0.00 0.00 0.00 4.44
726 727 5.431179 ACACAATTTTATACTCCCTCCGT 57.569 39.130 0.00 0.00 0.00 4.69
727 728 6.990349 ACATACACAATTTTATACTCCCTCCG 59.010 38.462 0.00 0.00 0.00 4.63
728 729 7.773690 ACACATACACAATTTTATACTCCCTCC 59.226 37.037 0.00 0.00 0.00 4.30
729 730 8.612619 CACACATACACAATTTTATACTCCCTC 58.387 37.037 0.00 0.00 0.00 4.30
730 731 8.107095 ACACACATACACAATTTTATACTCCCT 58.893 33.333 0.00 0.00 0.00 4.20
731 732 8.276252 ACACACATACACAATTTTATACTCCC 57.724 34.615 0.00 0.00 0.00 4.30
742 743 9.862371 TCTGTTTTAAAAACACACATACACAAT 57.138 25.926 1.31 0.00 0.00 2.71
743 744 9.692749 TTCTGTTTTAAAAACACACATACACAA 57.307 25.926 1.31 0.00 0.00 3.33
744 745 9.347934 CTTCTGTTTTAAAAACACACATACACA 57.652 29.630 1.31 0.00 0.00 3.72
745 746 8.803799 CCTTCTGTTTTAAAAACACACATACAC 58.196 33.333 1.31 0.00 0.00 2.90
746 747 7.489757 GCCTTCTGTTTTAAAAACACACATACA 59.510 33.333 1.31 0.00 0.00 2.29
747 748 7.489757 TGCCTTCTGTTTTAAAAACACACATAC 59.510 33.333 1.31 0.00 0.00 2.39
776 777 7.250569 CAAAACCATCTATTCATGTGTGTACC 58.749 38.462 0.00 0.00 0.00 3.34
777 778 7.120579 TCCAAAACCATCTATTCATGTGTGTAC 59.879 37.037 0.00 0.00 0.00 2.90
783 784 8.137745 ACAAATCCAAAACCATCTATTCATGT 57.862 30.769 0.00 0.00 0.00 3.21
800 805 6.403866 AGCATGTCAAACTTTACAAATCCA 57.596 33.333 0.00 0.00 0.00 3.41
899 967 5.180680 AGCTTTGATGTTTACCCGACTTAAC 59.819 40.000 0.00 0.00 0.00 2.01
904 972 3.335579 AGAGCTTTGATGTTTACCCGAC 58.664 45.455 0.00 0.00 0.00 4.79
1625 1847 4.003788 CGCGGGACCCAGTTGTCT 62.004 66.667 12.15 0.00 35.54 3.41
1716 1938 1.443407 CATACCCGGAGACAGGCAG 59.557 63.158 0.73 0.00 0.00 4.85
1762 1984 3.775654 CCTCTCTGACCACCGGCC 61.776 72.222 0.00 0.00 0.00 6.13
1811 2033 0.807667 CCTCTCAATCGGCTCCAACG 60.808 60.000 0.00 0.00 0.00 4.10
1883 2107 5.980116 ACAACAGCGACAATCTCATATAGAC 59.020 40.000 0.00 0.00 36.93 2.59
1899 2123 7.510428 AAAGCAAATCATTATAACAACAGCG 57.490 32.000 0.00 0.00 0.00 5.18
1980 2204 6.669154 ACCCCAATTCAACACATTATCATTCT 59.331 34.615 0.00 0.00 0.00 2.40
2002 2226 4.443598 GGTCATCTTCTGATTAGTCCACCC 60.444 50.000 0.00 0.00 35.97 4.61
2086 2310 7.722285 ACACACCCTTTATACTTTGTTATGTGT 59.278 33.333 0.00 0.00 40.53 3.72
2102 2326 9.695155 AGCAATTAAGTATATAACACACCCTTT 57.305 29.630 0.00 0.00 0.00 3.11
2123 2347 2.710377 TCCGTGCAATCAACTAGCAAT 58.290 42.857 0.00 0.00 40.35 3.56
2130 2355 3.061161 GCAATTTCATCCGTGCAATCAAC 59.939 43.478 0.00 0.00 36.97 3.18
2131 2356 3.056678 AGCAATTTCATCCGTGCAATCAA 60.057 39.130 0.00 0.00 39.50 2.57
2138 2363 4.394300 AGAAGAAGAGCAATTTCATCCGTG 59.606 41.667 0.00 0.00 0.00 4.94
2195 2420 5.874093 ACCTCTAGATCTAATGCAAATGGG 58.126 41.667 3.57 0.00 0.00 4.00
2201 2426 4.460731 CCATCGACCTCTAGATCTAATGCA 59.539 45.833 3.57 0.00 0.00 3.96
2202 2427 4.461081 ACCATCGACCTCTAGATCTAATGC 59.539 45.833 3.57 0.00 0.00 3.56
2239 2464 9.863650 AGCCTCTAATAGTGTAGAGTTGTATTA 57.136 33.333 8.11 0.00 43.84 0.98
2258 2483 8.836413 GTGTGCAATTTAATTATGTAGCCTCTA 58.164 33.333 0.00 0.00 0.00 2.43
2299 2524 9.903682 CCTAATCAATTGCTTGAATCGAATAAT 57.096 29.630 4.80 0.00 44.29 1.28
2305 2530 7.219535 CACTTTCCTAATCAATTGCTTGAATCG 59.780 37.037 4.80 0.00 44.29 3.34
2347 2572 9.480053 CAATTTTTGACTTGTCAGTAATGGAAT 57.520 29.630 3.61 0.00 31.22 3.01
2363 2588 5.278604 AGTTACCGTGCTTCAATTTTTGAC 58.721 37.500 0.00 0.00 39.87 3.18
2385 2610 9.141400 GTGACCTGATTTGACTAACTTTACTAG 57.859 37.037 0.00 0.00 0.00 2.57
2404 2629 3.428725 GCTCATGTAGTCTGAGTGACCTG 60.429 52.174 0.00 0.00 46.46 4.00
2411 2636 6.567959 TCTAAATGTGCTCATGTAGTCTGAG 58.432 40.000 20.30 2.79 40.74 3.35
2466 2691 3.188492 TGCACTGCATTTTTCAACACAG 58.812 40.909 0.00 0.00 31.71 3.66
2483 2708 6.417191 TTCGAAAATACTCCAAGTATGCAC 57.583 37.500 0.00 0.00 40.32 4.57
2503 2728 9.559958 GCTTCACATATTTTCCCATATTATTCG 57.440 33.333 0.00 0.00 0.00 3.34
2628 2853 8.688151 ACACTCATTACTCTAGATCTTTGTACC 58.312 37.037 0.00 0.00 0.00 3.34
2657 2882 2.364632 TGTGGCACAATATAAGCGCTT 58.635 42.857 27.97 27.97 44.16 4.68
2716 2941 1.004628 ACCATGCAGAATAGTGGCACA 59.995 47.619 21.41 6.31 40.83 4.57
2784 3009 6.766467 CCTACACTTCCATAGTTGGTTATTCC 59.234 42.308 0.00 0.00 44.06 3.01
2800 3025 5.023533 TGTCATAGCCAATCCTACACTTC 57.976 43.478 0.00 0.00 0.00 3.01
3055 3280 8.267620 TGTGAATTGGATGTGTAATTCTACAG 57.732 34.615 0.00 0.00 41.54 2.74
3113 3338 5.543507 ATTTTGCCAGTGGTTTGAATACA 57.456 34.783 11.74 0.00 0.00 2.29
3117 3342 7.872113 ATTTTAATTTTGCCAGTGGTTTGAA 57.128 28.000 11.74 1.58 0.00 2.69
3383 3612 6.792326 CAGAATGCTCAGAATCATTTAAGCA 58.208 36.000 5.15 5.15 43.20 3.91
3417 3646 0.240945 CATGCCGACTTCAAACCCAC 59.759 55.000 0.00 0.00 0.00 4.61
3441 3670 0.875059 ACGCTTAAAGCTTCTGCACC 59.125 50.000 0.00 0.00 39.60 5.01
3444 3673 2.688364 ACAACGCTTAAAGCTTCTGC 57.312 45.000 0.00 3.76 39.60 4.26
3451 3680 6.664515 TCAAGTCCAATTACAACGCTTAAAG 58.335 36.000 0.00 0.00 0.00 1.85
3523 3754 9.699703 TTTAAATAGAAAGGCAAAAATACGCTT 57.300 25.926 0.00 0.00 0.00 4.68
3543 3774 5.336134 GGTGCACGTCCTACCAAATTTAAAT 60.336 40.000 11.45 0.00 34.61 1.40
3563 3794 3.936902 TTCGCTTAATATCGTTGGTGC 57.063 42.857 0.00 0.00 0.00 5.01
3570 3813 5.250667 TCATCGCTTTTCGCTTAATATCG 57.749 39.130 0.00 0.00 38.27 2.92
3774 4019 8.160765 TCAAACATTCCTAACTTGAGATGGTTA 58.839 33.333 0.00 0.00 0.00 2.85
3776 4021 6.542821 TCAAACATTCCTAACTTGAGATGGT 58.457 36.000 0.00 0.00 0.00 3.55
3844 4089 7.412063 ACACTTAAAAACCTTGCGTAAACTAG 58.588 34.615 0.00 0.00 0.00 2.57
3853 4098 3.978855 CGCCTAACACTTAAAAACCTTGC 59.021 43.478 0.00 0.00 0.00 4.01
3854 4099 3.978855 GCGCCTAACACTTAAAAACCTTG 59.021 43.478 0.00 0.00 0.00 3.61
3919 4166 4.433382 CGTTGGTATAGAACGCTTAAGC 57.567 45.455 17.83 17.83 39.71 3.09
4011 4260 1.270893 GCTCCTCCACGTTTCTCCTTT 60.271 52.381 0.00 0.00 0.00 3.11
4018 4267 1.550976 CCTCTAAGCTCCTCCACGTTT 59.449 52.381 0.00 0.00 0.00 3.60
4074 4323 1.227380 CGATGGCTTCTCTTCCCCG 60.227 63.158 0.00 0.00 0.00 5.73
4109 4410 2.123077 CCTGATCTCGGGCTCCCT 60.123 66.667 3.11 0.00 35.28 4.20
4110 4411 3.237741 CCCTGATCTCGGGCTCCC 61.238 72.222 7.58 0.00 41.13 4.30
4205 4509 0.977395 CTTTCTTCCCCGACCTCACT 59.023 55.000 0.00 0.00 0.00 3.41
4240 4544 0.461163 GAGAGAAAGGCGGCCTTCTC 60.461 60.000 32.23 32.23 43.92 2.87
4254 4558 1.213013 GCGCGAAACAGAGGAGAGA 59.787 57.895 12.10 0.00 0.00 3.10
4271 4575 2.747855 CAAAGGAGAGCGGGGTGC 60.748 66.667 0.00 0.00 46.98 5.01
4373 4688 7.439655 GTCACTGATATCTAGGCTTTAAACTGG 59.560 40.741 3.98 0.00 0.00 4.00
4424 4739 6.172630 TGCTGAATATGTCTTCAAAGTAGCA 58.827 36.000 0.00 0.00 34.86 3.49
4425 4740 6.536582 TCTGCTGAATATGTCTTCAAAGTAGC 59.463 38.462 0.00 0.00 34.86 3.58
4426 4741 8.484641 TTCTGCTGAATATGTCTTCAAAGTAG 57.515 34.615 1.33 0.00 34.86 2.57
4427 4742 7.065085 GCTTCTGCTGAATATGTCTTCAAAGTA 59.935 37.037 6.48 0.00 34.86 2.24
4428 4743 6.128063 GCTTCTGCTGAATATGTCTTCAAAGT 60.128 38.462 6.48 0.00 34.86 2.66
4429 4744 6.128090 TGCTTCTGCTGAATATGTCTTCAAAG 60.128 38.462 6.48 0.00 40.48 2.77
4430 4745 5.706833 TGCTTCTGCTGAATATGTCTTCAAA 59.293 36.000 6.48 0.00 40.48 2.69
4431 4746 5.122869 GTGCTTCTGCTGAATATGTCTTCAA 59.877 40.000 6.48 0.00 40.48 2.69
4432 4747 4.633126 GTGCTTCTGCTGAATATGTCTTCA 59.367 41.667 6.48 0.00 40.48 3.02
4433 4748 4.260132 CGTGCTTCTGCTGAATATGTCTTC 60.260 45.833 6.48 0.00 40.48 2.87
4434 4749 3.620374 CGTGCTTCTGCTGAATATGTCTT 59.380 43.478 6.48 0.00 40.48 3.01
4435 4750 3.193263 CGTGCTTCTGCTGAATATGTCT 58.807 45.455 6.48 0.00 40.48 3.41
4436 4751 2.932614 ACGTGCTTCTGCTGAATATGTC 59.067 45.455 6.48 0.00 40.48 3.06
4437 4752 2.674852 CACGTGCTTCTGCTGAATATGT 59.325 45.455 0.82 7.85 40.48 2.29
4438 4753 2.674852 ACACGTGCTTCTGCTGAATATG 59.325 45.455 17.22 7.29 40.48 1.78
4439 4754 2.977914 ACACGTGCTTCTGCTGAATAT 58.022 42.857 17.22 0.00 40.48 1.28
4440 4755 2.455674 ACACGTGCTTCTGCTGAATA 57.544 45.000 17.22 0.00 40.48 1.75
4441 4756 2.455674 TACACGTGCTTCTGCTGAAT 57.544 45.000 17.22 0.00 40.48 2.57
4442 4757 2.232756 TTACACGTGCTTCTGCTGAA 57.767 45.000 17.22 5.85 40.48 3.02
4443 4758 2.029020 AGATTACACGTGCTTCTGCTGA 60.029 45.455 17.22 0.00 40.48 4.26
4444 4759 2.341257 AGATTACACGTGCTTCTGCTG 58.659 47.619 17.22 0.00 40.48 4.41
4445 4760 2.738846 CAAGATTACACGTGCTTCTGCT 59.261 45.455 17.22 2.87 40.48 4.24
4446 4761 2.726066 GCAAGATTACACGTGCTTCTGC 60.726 50.000 17.22 13.22 40.80 4.26
4447 4762 3.109230 GCAAGATTACACGTGCTTCTG 57.891 47.619 17.22 7.01 40.80 3.02
4452 4767 1.005975 CGCTAGCAAGATTACACGTGC 60.006 52.381 17.22 0.00 43.35 5.34
4453 4768 2.526077 TCGCTAGCAAGATTACACGTG 58.474 47.619 15.48 15.48 0.00 4.49
4454 4769 2.933495 TCGCTAGCAAGATTACACGT 57.067 45.000 16.45 0.00 0.00 4.49
4455 4770 3.633235 AGATCGCTAGCAAGATTACACG 58.367 45.455 16.45 0.00 0.00 4.49
4456 4771 6.400515 GCATTAGATCGCTAGCAAGATTACAC 60.401 42.308 16.45 0.00 0.00 2.90
4523 4838 0.466922 GATGCCCATCCAGGAGGTTG 60.467 60.000 0.00 0.00 41.22 3.77
4552 4888 0.106819 AGACAAGGAGATGCCCATGC 60.107 55.000 0.00 0.00 37.37 4.06
4571 4907 4.219725 GCTTCTTACCAATTGGGCAAACTA 59.780 41.667 27.89 7.74 42.05 2.24
4732 5068 8.020819 ACCATTCATTACATAAACTTGAACACG 58.979 33.333 0.00 0.00 0.00 4.49
4764 5100 2.128128 CAACTCGACGCGCACAAC 60.128 61.111 5.73 0.00 0.00 3.32
4812 5148 1.079543 CAGCGAACAGTCCTGGAGG 60.080 63.158 0.00 0.00 34.19 4.30
4832 5200 8.413229 GCATCAATTACAACTACCCAATAATGT 58.587 33.333 0.00 0.00 0.00 2.71
4864 5232 8.286800 TCACTTTCAAAAATATCGTTGTACAGG 58.713 33.333 0.00 0.00 0.00 4.00
4898 5266 4.936411 TCGTTGTACAGGTCACTTCAAAAA 59.064 37.500 0.00 0.00 0.00 1.94
4899 5267 4.505808 TCGTTGTACAGGTCACTTCAAAA 58.494 39.130 0.00 0.00 0.00 2.44
4900 5268 4.126208 TCGTTGTACAGGTCACTTCAAA 57.874 40.909 0.00 0.00 0.00 2.69
4901 5269 3.804786 TCGTTGTACAGGTCACTTCAA 57.195 42.857 0.00 0.00 0.00 2.69
4902 5270 4.330944 AATCGTTGTACAGGTCACTTCA 57.669 40.909 0.00 0.00 0.00 3.02
4903 5271 5.347907 CCTAAATCGTTGTACAGGTCACTTC 59.652 44.000 0.00 0.00 0.00 3.01
4904 5272 5.235516 CCTAAATCGTTGTACAGGTCACTT 58.764 41.667 0.00 0.00 0.00 3.16
4905 5273 4.322499 CCCTAAATCGTTGTACAGGTCACT 60.322 45.833 0.00 0.00 0.00 3.41
4906 5274 3.930848 CCCTAAATCGTTGTACAGGTCAC 59.069 47.826 0.00 0.00 0.00 3.67
4907 5275 3.055675 CCCCTAAATCGTTGTACAGGTCA 60.056 47.826 0.00 0.00 0.00 4.02
4908 5276 3.055602 ACCCCTAAATCGTTGTACAGGTC 60.056 47.826 0.00 0.00 0.00 3.85
4909 5277 2.908351 ACCCCTAAATCGTTGTACAGGT 59.092 45.455 0.00 0.00 0.00 4.00
4910 5278 3.622166 ACCCCTAAATCGTTGTACAGG 57.378 47.619 0.00 0.00 0.00 4.00
4911 5279 4.690122 CCTACCCCTAAATCGTTGTACAG 58.310 47.826 0.00 0.00 0.00 2.74
4912 5280 3.118665 GCCTACCCCTAAATCGTTGTACA 60.119 47.826 0.00 0.00 0.00 2.90
4913 5281 3.133542 AGCCTACCCCTAAATCGTTGTAC 59.866 47.826 0.00 0.00 0.00 2.90
4914 5282 3.377573 AGCCTACCCCTAAATCGTTGTA 58.622 45.455 0.00 0.00 0.00 2.41
4915 5283 2.193993 AGCCTACCCCTAAATCGTTGT 58.806 47.619 0.00 0.00 0.00 3.32
4916 5284 3.133362 TGTAGCCTACCCCTAAATCGTTG 59.867 47.826 0.00 0.00 0.00 4.10
4919 5287 4.315803 CATTGTAGCCTACCCCTAAATCG 58.684 47.826 0.00 0.00 0.00 3.34
4969 5337 4.160439 AGCAGTTGTACATCAAGCTAGCTA 59.840 41.667 19.70 3.08 36.33 3.32
5163 5546 1.293924 CATCAGATCAGGACGTTGCC 58.706 55.000 0.00 0.00 0.00 4.52
5437 5845 2.035626 CCAAACGCCAGGGTCCAT 59.964 61.111 0.00 0.00 0.00 3.41
5438 5846 4.966787 GCCAAACGCCAGGGTCCA 62.967 66.667 0.00 0.00 0.00 4.02
5514 5922 0.320697 GGTTCACAGCGTCTAGGGTT 59.679 55.000 0.00 0.00 0.00 4.11
5526 5934 0.034337 GGTAGACGCCAAGGTTCACA 59.966 55.000 0.00 0.00 0.00 3.58
5682 6091 4.586841 TCCACGGAGGAAAATCAAATTTGT 59.413 37.500 17.47 3.04 45.65 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.