Multiple sequence alignment - TraesCS5B01G191400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G191400 chr5B 100.000 2627 0 0 1 2627 345046839 345049465 0.000000e+00 4852.0
1 TraesCS5B01G191400 chr5B 88.889 603 49 10 1015 1617 344951042 344951626 0.000000e+00 726.0
2 TraesCS5B01G191400 chr5B 94.463 307 14 2 1 306 439958508 439958204 1.100000e-128 470.0
3 TraesCS5B01G191400 chr5B 93.396 318 17 3 1 316 38565747 38566062 3.960000e-128 468.0
4 TraesCS5B01G191400 chr5B 92.169 332 16 4 1 324 262349430 262349759 6.620000e-126 460.0
5 TraesCS5B01G191400 chr5B 94.949 99 3 2 1856 1953 344951764 344951861 1.260000e-33 154.0
6 TraesCS5B01G191400 chr5D 87.299 1866 91 47 354 2137 302014286 302016087 0.000000e+00 1999.0
7 TraesCS5B01G191400 chr5D 87.336 608 52 14 1015 1617 302003913 302004500 0.000000e+00 673.0
8 TraesCS5B01G191400 chr5D 87.037 270 16 10 2206 2469 302016074 302016330 1.190000e-73 287.0
9 TraesCS5B01G191400 chr5D 98.214 112 2 0 2516 2627 302016333 302016444 2.060000e-46 196.0
10 TraesCS5B01G191400 chr5A 84.769 1451 79 51 736 2137 395839945 395838588 0.000000e+00 1325.0
11 TraesCS5B01G191400 chr5A 87.294 606 47 15 1015 1620 395848084 395847509 0.000000e+00 665.0
12 TraesCS5B01G191400 chr5A 89.136 359 34 3 2271 2627 395838523 395838168 2.400000e-120 442.0
13 TraesCS5B01G191400 chr5A 85.345 116 12 4 1778 1893 395847421 395847311 5.940000e-22 115.0
14 TraesCS5B01G191400 chr5A 86.420 81 7 4 381 461 395840062 395839986 4.660000e-13 86.1
15 TraesCS5B01G191400 chr5A 97.436 39 0 1 1672 1710 395847515 395847478 6.070000e-07 65.8
16 TraesCS5B01G191400 chr2B 93.750 320 17 2 1 319 82339401 82339084 6.580000e-131 477.0
17 TraesCS5B01G191400 chr3B 92.236 322 18 4 1 317 578757317 578757636 1.430000e-122 449.0
18 TraesCS5B01G191400 chr3B 92.163 319 20 5 1 316 82821710 82822026 1.860000e-121 446.0
19 TraesCS5B01G191400 chr3D 91.615 322 19 6 1 316 100763352 100763671 3.100000e-119 438.0
20 TraesCS5B01G191400 chr7B 90.854 328 23 4 1 323 90069109 90068784 1.440000e-117 433.0
21 TraesCS5B01G191400 chr1D 90.966 321 22 5 1 317 457823415 457823098 2.420000e-115 425.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G191400 chr5B 345046839 345049465 2626 False 4852.000000 4852 100.000 1 2627 1 chr5B.!!$F3 2626
1 TraesCS5B01G191400 chr5B 344951042 344951861 819 False 440.000000 726 91.919 1015 1953 2 chr5B.!!$F4 938
2 TraesCS5B01G191400 chr5D 302014286 302016444 2158 False 827.333333 1999 90.850 354 2627 3 chr5D.!!$F2 2273
3 TraesCS5B01G191400 chr5D 302003913 302004500 587 False 673.000000 673 87.336 1015 1617 1 chr5D.!!$F1 602
4 TraesCS5B01G191400 chr5A 395838168 395840062 1894 True 617.700000 1325 86.775 381 2627 3 chr5A.!!$R1 2246
5 TraesCS5B01G191400 chr5A 395847311 395848084 773 True 281.933333 665 90.025 1015 1893 3 chr5A.!!$R2 878

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
171 172 0.034477 CCACCACCATTACCACCTCC 60.034 60.0 0.0 0.0 0.0 4.3 F
172 173 0.034477 CACCACCATTACCACCTCCC 60.034 60.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1401 1518 0.103026 CCTCGTCCATGCTCATCGAA 59.897 55.0 0.0 0.0 0.0 3.71 R
1993 2150 0.598065 AAGAAAGGAACACGGCATGC 59.402 50.0 9.9 9.9 0.0 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.480555 GCGTGATTCCTTGCCGTG 59.519 61.111 0.00 0.00 0.00 4.94
18 19 2.325082 GCGTGATTCCTTGCCGTGT 61.325 57.895 0.00 0.00 0.00 4.49
19 20 1.497278 CGTGATTCCTTGCCGTGTG 59.503 57.895 0.00 0.00 0.00 3.82
20 21 0.948623 CGTGATTCCTTGCCGTGTGA 60.949 55.000 0.00 0.00 0.00 3.58
21 22 1.453155 GTGATTCCTTGCCGTGTGAT 58.547 50.000 0.00 0.00 0.00 3.06
22 23 1.812571 GTGATTCCTTGCCGTGTGATT 59.187 47.619 0.00 0.00 0.00 2.57
23 24 1.811965 TGATTCCTTGCCGTGTGATTG 59.188 47.619 0.00 0.00 0.00 2.67
24 25 2.083774 GATTCCTTGCCGTGTGATTGA 58.916 47.619 0.00 0.00 0.00 2.57
25 26 2.198827 TTCCTTGCCGTGTGATTGAT 57.801 45.000 0.00 0.00 0.00 2.57
26 27 1.452110 TCCTTGCCGTGTGATTGATG 58.548 50.000 0.00 0.00 0.00 3.07
27 28 0.179156 CCTTGCCGTGTGATTGATGC 60.179 55.000 0.00 0.00 0.00 3.91
28 29 0.521867 CTTGCCGTGTGATTGATGCG 60.522 55.000 0.00 0.00 0.00 4.73
29 30 0.952984 TTGCCGTGTGATTGATGCGA 60.953 50.000 0.00 0.00 0.00 5.10
30 31 0.744057 TGCCGTGTGATTGATGCGAT 60.744 50.000 0.00 0.00 0.00 4.58
31 32 0.041839 GCCGTGTGATTGATGCGATC 60.042 55.000 0.00 0.00 0.00 3.69
32 33 1.575244 CCGTGTGATTGATGCGATCT 58.425 50.000 0.00 0.00 0.00 2.75
33 34 2.742774 CCGTGTGATTGATGCGATCTA 58.257 47.619 0.00 0.00 0.00 1.98
34 35 2.472861 CCGTGTGATTGATGCGATCTAC 59.527 50.000 0.00 0.00 0.00 2.59
35 36 3.115554 CGTGTGATTGATGCGATCTACA 58.884 45.455 0.00 0.00 0.00 2.74
36 37 3.551485 CGTGTGATTGATGCGATCTACAA 59.449 43.478 0.00 0.00 0.00 2.41
37 38 4.032786 CGTGTGATTGATGCGATCTACAAA 59.967 41.667 0.00 0.00 0.00 2.83
38 39 5.445806 CGTGTGATTGATGCGATCTACAAAA 60.446 40.000 0.00 0.00 0.00 2.44
39 40 6.489675 GTGTGATTGATGCGATCTACAAAAT 58.510 36.000 0.00 0.00 0.00 1.82
40 41 6.412943 GTGTGATTGATGCGATCTACAAAATG 59.587 38.462 0.00 0.00 0.00 2.32
41 42 6.093909 TGTGATTGATGCGATCTACAAAATGT 59.906 34.615 0.00 0.00 0.00 2.71
42 43 6.412943 GTGATTGATGCGATCTACAAAATGTG 59.587 38.462 0.00 0.00 0.00 3.21
43 44 5.878332 TTGATGCGATCTACAAAATGTGT 57.122 34.783 0.00 0.00 44.82 3.72
44 45 5.220557 TGATGCGATCTACAAAATGTGTG 57.779 39.130 0.00 0.00 41.89 3.82
45 46 4.094739 TGATGCGATCTACAAAATGTGTGG 59.905 41.667 0.00 0.00 41.89 4.17
46 47 3.407698 TGCGATCTACAAAATGTGTGGT 58.592 40.909 0.00 0.00 41.89 4.16
47 48 3.435327 TGCGATCTACAAAATGTGTGGTC 59.565 43.478 0.00 0.00 41.89 4.02
48 49 3.684788 GCGATCTACAAAATGTGTGGTCT 59.315 43.478 0.00 0.00 41.89 3.85
49 50 4.201724 GCGATCTACAAAATGTGTGGTCTC 60.202 45.833 0.00 0.00 41.89 3.36
50 51 5.171476 CGATCTACAAAATGTGTGGTCTCT 58.829 41.667 0.00 0.00 41.89 3.10
51 52 5.639506 CGATCTACAAAATGTGTGGTCTCTT 59.360 40.000 0.00 0.00 41.89 2.85
52 53 6.811665 CGATCTACAAAATGTGTGGTCTCTTA 59.188 38.462 0.00 0.00 41.89 2.10
53 54 7.201444 CGATCTACAAAATGTGTGGTCTCTTAC 60.201 40.741 0.00 0.00 41.89 2.34
54 55 6.822442 TCTACAAAATGTGTGGTCTCTTACA 58.178 36.000 0.00 0.00 41.89 2.41
55 56 6.929049 TCTACAAAATGTGTGGTCTCTTACAG 59.071 38.462 0.00 0.00 41.89 2.74
56 57 4.275936 ACAAAATGTGTGGTCTCTTACAGC 59.724 41.667 0.00 0.00 39.72 4.40
57 58 4.357918 AAATGTGTGGTCTCTTACAGCT 57.642 40.909 0.00 0.00 0.00 4.24
58 59 4.357918 AATGTGTGGTCTCTTACAGCTT 57.642 40.909 0.00 0.00 0.00 3.74
59 60 3.838244 TGTGTGGTCTCTTACAGCTTT 57.162 42.857 0.00 0.00 0.00 3.51
60 61 3.466836 TGTGTGGTCTCTTACAGCTTTG 58.533 45.455 0.00 0.00 0.00 2.77
61 62 2.808543 GTGTGGTCTCTTACAGCTTTGG 59.191 50.000 0.00 0.00 0.00 3.28
62 63 2.703536 TGTGGTCTCTTACAGCTTTGGA 59.296 45.455 0.00 0.00 0.00 3.53
63 64 3.135712 TGTGGTCTCTTACAGCTTTGGAA 59.864 43.478 0.00 0.00 0.00 3.53
64 65 4.134563 GTGGTCTCTTACAGCTTTGGAAA 58.865 43.478 0.00 0.00 0.00 3.13
65 66 4.023963 GTGGTCTCTTACAGCTTTGGAAAC 60.024 45.833 0.00 0.00 0.00 2.78
66 67 3.502595 GGTCTCTTACAGCTTTGGAAACC 59.497 47.826 0.00 0.00 0.00 3.27
67 68 3.186613 GTCTCTTACAGCTTTGGAAACCG 59.813 47.826 0.00 0.00 0.00 4.44
68 69 1.877443 TCTTACAGCTTTGGAAACCGC 59.123 47.619 0.00 0.00 0.00 5.68
69 70 1.880027 CTTACAGCTTTGGAAACCGCT 59.120 47.619 0.00 0.00 33.65 5.52
70 71 1.975660 TACAGCTTTGGAAACCGCTT 58.024 45.000 0.00 0.00 31.33 4.68
71 72 1.975660 ACAGCTTTGGAAACCGCTTA 58.024 45.000 0.00 0.00 31.33 3.09
72 73 1.880027 ACAGCTTTGGAAACCGCTTAG 59.120 47.619 0.00 0.00 31.33 2.18
73 74 0.881796 AGCTTTGGAAACCGCTTAGC 59.118 50.000 0.00 0.00 29.62 3.09
74 75 0.596082 GCTTTGGAAACCGCTTAGCA 59.404 50.000 4.70 0.00 0.00 3.49
75 76 1.000717 GCTTTGGAAACCGCTTAGCAA 60.001 47.619 4.70 0.00 0.00 3.91
76 77 2.922335 GCTTTGGAAACCGCTTAGCAAG 60.922 50.000 4.70 0.00 0.00 4.01
85 86 2.671854 GCTTAGCAAGCGGAGAGAC 58.328 57.895 0.00 0.00 45.74 3.36
86 87 0.808060 GCTTAGCAAGCGGAGAGACC 60.808 60.000 0.00 0.00 45.74 3.85
104 105 2.577059 GGGACGCCATCGACTTCA 59.423 61.111 0.00 0.00 39.41 3.02
105 106 1.144057 GGGACGCCATCGACTTCAT 59.856 57.895 0.00 0.00 39.41 2.57
106 107 0.876342 GGGACGCCATCGACTTCATC 60.876 60.000 0.00 0.00 39.41 2.92
107 108 0.179111 GGACGCCATCGACTTCATCA 60.179 55.000 0.00 0.00 39.41 3.07
108 109 1.539065 GGACGCCATCGACTTCATCAT 60.539 52.381 0.00 0.00 39.41 2.45
109 110 2.288213 GGACGCCATCGACTTCATCATA 60.288 50.000 0.00 0.00 39.41 2.15
110 111 2.983136 GACGCCATCGACTTCATCATAG 59.017 50.000 0.00 0.00 39.41 2.23
111 112 1.723542 CGCCATCGACTTCATCATAGC 59.276 52.381 0.00 0.00 38.10 2.97
112 113 2.608998 CGCCATCGACTTCATCATAGCT 60.609 50.000 0.00 0.00 38.10 3.32
113 114 2.735663 GCCATCGACTTCATCATAGCTG 59.264 50.000 0.00 0.00 0.00 4.24
114 115 3.324117 CCATCGACTTCATCATAGCTGG 58.676 50.000 0.00 0.00 0.00 4.85
115 116 3.244009 CCATCGACTTCATCATAGCTGGT 60.244 47.826 0.00 0.00 0.00 4.00
116 117 3.717400 TCGACTTCATCATAGCTGGTC 57.283 47.619 0.00 0.00 0.00 4.02
117 118 3.291584 TCGACTTCATCATAGCTGGTCT 58.708 45.455 0.00 0.00 0.00 3.85
118 119 3.701542 TCGACTTCATCATAGCTGGTCTT 59.298 43.478 0.00 0.00 0.00 3.01
119 120 4.047822 CGACTTCATCATAGCTGGTCTTC 58.952 47.826 0.00 0.00 0.00 2.87
120 121 4.047822 GACTTCATCATAGCTGGTCTTCG 58.952 47.826 0.00 0.00 0.00 3.79
121 122 3.449018 ACTTCATCATAGCTGGTCTTCGT 59.551 43.478 0.00 0.00 0.00 3.85
122 123 4.081420 ACTTCATCATAGCTGGTCTTCGTT 60.081 41.667 0.00 0.00 0.00 3.85
123 124 4.046938 TCATCATAGCTGGTCTTCGTTC 57.953 45.455 0.00 0.00 0.00 3.95
124 125 3.701542 TCATCATAGCTGGTCTTCGTTCT 59.298 43.478 0.00 0.00 0.00 3.01
125 126 4.160439 TCATCATAGCTGGTCTTCGTTCTT 59.840 41.667 0.00 0.00 0.00 2.52
126 127 4.111375 TCATAGCTGGTCTTCGTTCTTC 57.889 45.455 0.00 0.00 0.00 2.87
127 128 2.631418 TAGCTGGTCTTCGTTCTTCG 57.369 50.000 0.00 0.00 41.41 3.79
128 129 0.038159 AGCTGGTCTTCGTTCTTCGG 60.038 55.000 0.00 0.00 40.32 4.30
129 130 1.627550 GCTGGTCTTCGTTCTTCGGC 61.628 60.000 0.00 0.00 40.32 5.54
130 131 1.344942 CTGGTCTTCGTTCTTCGGCG 61.345 60.000 0.00 0.00 40.32 6.46
131 132 1.372623 GGTCTTCGTTCTTCGGCGT 60.373 57.895 6.85 0.00 40.32 5.68
132 133 1.342796 GGTCTTCGTTCTTCGGCGTC 61.343 60.000 6.85 0.00 40.32 5.19
133 134 1.441515 TCTTCGTTCTTCGGCGTCG 60.442 57.895 1.15 1.15 40.32 5.12
134 135 2.429571 TTCGTTCTTCGGCGTCGG 60.430 61.111 10.62 0.00 40.32 4.79
137 138 2.813908 GTTCTTCGGCGTCGGCAT 60.814 61.111 19.59 0.00 42.47 4.40
138 139 2.047655 TTCTTCGGCGTCGGCATT 60.048 55.556 19.59 0.00 42.47 3.56
139 140 1.669760 TTCTTCGGCGTCGGCATTT 60.670 52.632 19.59 0.00 42.47 2.32
140 141 1.906994 TTCTTCGGCGTCGGCATTTG 61.907 55.000 19.59 2.23 42.47 2.32
141 142 4.096558 TTCGGCGTCGGCATTTGC 62.097 61.111 19.59 0.00 42.47 3.68
151 152 3.880846 GCATTTGCGCCTCCTCCG 61.881 66.667 4.18 0.00 0.00 4.63
161 162 3.402681 CTCCTCCGCCACCACCAT 61.403 66.667 0.00 0.00 0.00 3.55
162 163 2.933287 TCCTCCGCCACCACCATT 60.933 61.111 0.00 0.00 0.00 3.16
163 164 1.613928 TCCTCCGCCACCACCATTA 60.614 57.895 0.00 0.00 0.00 1.90
164 165 1.451387 CCTCCGCCACCACCATTAC 60.451 63.158 0.00 0.00 0.00 1.89
165 166 1.451387 CTCCGCCACCACCATTACC 60.451 63.158 0.00 0.00 0.00 2.85
166 167 2.191786 CTCCGCCACCACCATTACCA 62.192 60.000 0.00 0.00 0.00 3.25
167 168 2.043980 CCGCCACCACCATTACCAC 61.044 63.158 0.00 0.00 0.00 4.16
168 169 2.043980 CGCCACCACCATTACCACC 61.044 63.158 0.00 0.00 0.00 4.61
169 170 1.382629 GCCACCACCATTACCACCT 59.617 57.895 0.00 0.00 0.00 4.00
170 171 0.679960 GCCACCACCATTACCACCTC 60.680 60.000 0.00 0.00 0.00 3.85
171 172 0.034477 CCACCACCATTACCACCTCC 60.034 60.000 0.00 0.00 0.00 4.30
172 173 0.034477 CACCACCATTACCACCTCCC 60.034 60.000 0.00 0.00 0.00 4.30
173 174 1.223487 CCACCATTACCACCTCCCG 59.777 63.158 0.00 0.00 0.00 5.14
174 175 1.268992 CCACCATTACCACCTCCCGA 61.269 60.000 0.00 0.00 0.00 5.14
175 176 0.178068 CACCATTACCACCTCCCGAG 59.822 60.000 0.00 0.00 0.00 4.63
176 177 1.146263 CCATTACCACCTCCCGAGC 59.854 63.158 0.00 0.00 0.00 5.03
177 178 1.146263 CATTACCACCTCCCGAGCC 59.854 63.158 0.00 0.00 0.00 4.70
178 179 2.432300 ATTACCACCTCCCGAGCCG 61.432 63.158 0.00 0.00 0.00 5.52
190 191 3.669354 CGAGCCGGATTAGCTTCTT 57.331 52.632 5.05 0.00 41.75 2.52
191 192 1.941325 CGAGCCGGATTAGCTTCTTT 58.059 50.000 5.05 0.00 41.75 2.52
192 193 2.280628 CGAGCCGGATTAGCTTCTTTT 58.719 47.619 5.05 0.00 41.75 2.27
193 194 2.678336 CGAGCCGGATTAGCTTCTTTTT 59.322 45.455 5.05 0.00 41.75 1.94
194 195 3.869246 CGAGCCGGATTAGCTTCTTTTTA 59.131 43.478 5.05 0.00 41.75 1.52
195 196 4.025647 CGAGCCGGATTAGCTTCTTTTTAG 60.026 45.833 5.05 0.00 41.75 1.85
196 197 3.628032 AGCCGGATTAGCTTCTTTTTAGC 59.372 43.478 5.05 0.00 37.24 3.09
198 199 4.096532 GCCGGATTAGCTTCTTTTTAGCTT 59.903 41.667 5.05 0.00 46.42 3.74
199 200 5.393135 GCCGGATTAGCTTCTTTTTAGCTTT 60.393 40.000 5.05 0.00 46.42 3.51
200 201 6.030228 CCGGATTAGCTTCTTTTTAGCTTTG 58.970 40.000 0.00 0.00 46.42 2.77
201 202 6.349363 CCGGATTAGCTTCTTTTTAGCTTTGT 60.349 38.462 0.00 0.00 46.42 2.83
202 203 7.084486 CGGATTAGCTTCTTTTTAGCTTTGTT 58.916 34.615 2.39 0.00 46.42 2.83
203 204 7.595130 CGGATTAGCTTCTTTTTAGCTTTGTTT 59.405 33.333 2.39 0.00 46.42 2.83
204 205 8.703336 GGATTAGCTTCTTTTTAGCTTTGTTTG 58.297 33.333 2.39 0.00 46.42 2.93
205 206 8.593492 ATTAGCTTCTTTTTAGCTTTGTTTGG 57.407 30.769 2.39 0.00 46.42 3.28
206 207 5.359756 AGCTTCTTTTTAGCTTTGTTTGGG 58.640 37.500 0.00 0.00 46.42 4.12
207 208 4.024893 GCTTCTTTTTAGCTTTGTTTGGGC 60.025 41.667 0.00 0.00 35.74 5.36
208 209 5.351948 TTCTTTTTAGCTTTGTTTGGGCT 57.648 34.783 0.00 0.00 39.74 5.19
209 210 5.351948 TCTTTTTAGCTTTGTTTGGGCTT 57.648 34.783 0.00 0.00 37.50 4.35
210 211 5.115480 TCTTTTTAGCTTTGTTTGGGCTTG 58.885 37.500 0.00 0.00 37.50 4.01
211 212 4.479786 TTTTAGCTTTGTTTGGGCTTGT 57.520 36.364 0.00 0.00 37.50 3.16
212 213 3.726291 TTAGCTTTGTTTGGGCTTGTC 57.274 42.857 0.00 0.00 37.50 3.18
213 214 1.780503 AGCTTTGTTTGGGCTTGTCT 58.219 45.000 0.00 0.00 31.81 3.41
214 215 2.110578 AGCTTTGTTTGGGCTTGTCTT 58.889 42.857 0.00 0.00 31.81 3.01
215 216 2.159057 AGCTTTGTTTGGGCTTGTCTTG 60.159 45.455 0.00 0.00 31.81 3.02
216 217 2.204237 CTTTGTTTGGGCTTGTCTTGC 58.796 47.619 0.00 0.00 0.00 4.01
217 218 1.484038 TTGTTTGGGCTTGTCTTGCT 58.516 45.000 0.00 0.00 0.00 3.91
218 219 0.746063 TGTTTGGGCTTGTCTTGCTG 59.254 50.000 0.00 0.00 0.00 4.41
219 220 0.746659 GTTTGGGCTTGTCTTGCTGT 59.253 50.000 0.00 0.00 0.00 4.40
220 221 0.746063 TTTGGGCTTGTCTTGCTGTG 59.254 50.000 0.00 0.00 0.00 3.66
221 222 1.737355 TTGGGCTTGTCTTGCTGTGC 61.737 55.000 0.00 0.00 0.00 4.57
222 223 2.647297 GGCTTGTCTTGCTGTGCC 59.353 61.111 0.00 0.00 0.00 5.01
223 224 2.647297 GCTTGTCTTGCTGTGCCC 59.353 61.111 0.00 0.00 0.00 5.36
224 225 2.924105 GCTTGTCTTGCTGTGCCCC 61.924 63.158 0.00 0.00 0.00 5.80
225 226 2.203480 TTGTCTTGCTGTGCCCCC 60.203 61.111 0.00 0.00 0.00 5.40
226 227 2.981914 CTTGTCTTGCTGTGCCCCCA 62.982 60.000 0.00 0.00 0.00 4.96
227 228 2.674380 GTCTTGCTGTGCCCCCAG 60.674 66.667 0.00 0.00 35.49 4.45
238 239 4.697756 CCCCCAGCGCGACTTTGA 62.698 66.667 12.10 0.00 0.00 2.69
239 240 3.423154 CCCCAGCGCGACTTTGAC 61.423 66.667 12.10 0.00 0.00 3.18
240 241 2.357517 CCCAGCGCGACTTTGACT 60.358 61.111 12.10 0.00 0.00 3.41
241 242 1.961277 CCCAGCGCGACTTTGACTT 60.961 57.895 12.10 0.00 0.00 3.01
242 243 1.205064 CCAGCGCGACTTTGACTTG 59.795 57.895 12.10 0.00 0.00 3.16
243 244 1.221466 CCAGCGCGACTTTGACTTGA 61.221 55.000 12.10 0.00 0.00 3.02
244 245 0.792640 CAGCGCGACTTTGACTTGAT 59.207 50.000 12.10 0.00 0.00 2.57
245 246 1.195448 CAGCGCGACTTTGACTTGATT 59.805 47.619 12.10 0.00 0.00 2.57
246 247 1.195448 AGCGCGACTTTGACTTGATTG 59.805 47.619 12.10 0.00 0.00 2.67
247 248 1.069906 GCGCGACTTTGACTTGATTGT 60.070 47.619 12.10 0.00 0.00 2.71
248 249 2.156891 GCGCGACTTTGACTTGATTGTA 59.843 45.455 12.10 0.00 0.00 2.41
249 250 3.181520 GCGCGACTTTGACTTGATTGTAT 60.182 43.478 12.10 0.00 0.00 2.29
250 251 4.669197 GCGCGACTTTGACTTGATTGTATT 60.669 41.667 12.10 0.00 0.00 1.89
251 252 5.015733 CGCGACTTTGACTTGATTGTATTC 58.984 41.667 0.00 0.00 0.00 1.75
252 253 5.163953 CGCGACTTTGACTTGATTGTATTCT 60.164 40.000 0.00 0.00 0.00 2.40
253 254 6.017933 GCGACTTTGACTTGATTGTATTCTG 58.982 40.000 0.00 0.00 0.00 3.02
254 255 6.347725 GCGACTTTGACTTGATTGTATTCTGT 60.348 38.462 0.00 0.00 0.00 3.41
255 256 7.148639 GCGACTTTGACTTGATTGTATTCTGTA 60.149 37.037 0.00 0.00 0.00 2.74
256 257 8.162880 CGACTTTGACTTGATTGTATTCTGTAC 58.837 37.037 0.00 0.00 0.00 2.90
257 258 9.209175 GACTTTGACTTGATTGTATTCTGTACT 57.791 33.333 0.00 0.00 0.00 2.73
258 259 8.993121 ACTTTGACTTGATTGTATTCTGTACTG 58.007 33.333 0.00 0.00 0.00 2.74
259 260 8.902540 TTTGACTTGATTGTATTCTGTACTGT 57.097 30.769 0.00 0.00 0.00 3.55
260 261 8.902540 TTGACTTGATTGTATTCTGTACTGTT 57.097 30.769 0.00 0.00 0.00 3.16
261 262 9.990360 TTGACTTGATTGTATTCTGTACTGTTA 57.010 29.630 0.00 0.00 0.00 2.41
264 265 9.944376 ACTTGATTGTATTCTGTACTGTTATGT 57.056 29.630 0.00 0.00 0.00 2.29
267 268 9.161629 TGATTGTATTCTGTACTGTTATGTTGG 57.838 33.333 0.00 0.00 0.00 3.77
268 269 9.378551 GATTGTATTCTGTACTGTTATGTTGGA 57.621 33.333 0.00 0.00 0.00 3.53
269 270 9.905713 ATTGTATTCTGTACTGTTATGTTGGAT 57.094 29.630 0.00 0.00 0.00 3.41
270 271 8.716646 TGTATTCTGTACTGTTATGTTGGATG 57.283 34.615 0.00 0.00 0.00 3.51
271 272 6.683974 ATTCTGTACTGTTATGTTGGATGC 57.316 37.500 0.00 0.00 0.00 3.91
272 273 5.420725 TCTGTACTGTTATGTTGGATGCT 57.579 39.130 0.00 0.00 0.00 3.79
273 274 5.804639 TCTGTACTGTTATGTTGGATGCTT 58.195 37.500 0.00 0.00 0.00 3.91
274 275 5.643348 TCTGTACTGTTATGTTGGATGCTTG 59.357 40.000 0.00 0.00 0.00 4.01
275 276 4.699735 TGTACTGTTATGTTGGATGCTTGG 59.300 41.667 0.00 0.00 0.00 3.61
276 277 3.766545 ACTGTTATGTTGGATGCTTGGT 58.233 40.909 0.00 0.00 0.00 3.67
277 278 4.151883 ACTGTTATGTTGGATGCTTGGTT 58.848 39.130 0.00 0.00 0.00 3.67
278 279 4.218417 ACTGTTATGTTGGATGCTTGGTTC 59.782 41.667 0.00 0.00 0.00 3.62
279 280 3.190327 TGTTATGTTGGATGCTTGGTTCG 59.810 43.478 0.00 0.00 0.00 3.95
280 281 1.909700 ATGTTGGATGCTTGGTTCGT 58.090 45.000 0.00 0.00 0.00 3.85
281 282 1.686355 TGTTGGATGCTTGGTTCGTT 58.314 45.000 0.00 0.00 0.00 3.85
282 283 1.336440 TGTTGGATGCTTGGTTCGTTG 59.664 47.619 0.00 0.00 0.00 4.10
283 284 0.313672 TTGGATGCTTGGTTCGTTGC 59.686 50.000 0.00 0.00 0.00 4.17
284 285 0.537143 TGGATGCTTGGTTCGTTGCT 60.537 50.000 0.00 0.00 0.00 3.91
285 286 0.598065 GGATGCTTGGTTCGTTGCTT 59.402 50.000 0.00 0.00 0.00 3.91
286 287 1.000274 GGATGCTTGGTTCGTTGCTTT 60.000 47.619 0.00 0.00 0.00 3.51
287 288 2.227865 GGATGCTTGGTTCGTTGCTTTA 59.772 45.455 0.00 0.00 0.00 1.85
288 289 3.119495 GGATGCTTGGTTCGTTGCTTTAT 60.119 43.478 0.00 0.00 0.00 1.40
289 290 4.095782 GGATGCTTGGTTCGTTGCTTTATA 59.904 41.667 0.00 0.00 0.00 0.98
290 291 5.392595 GGATGCTTGGTTCGTTGCTTTATAA 60.393 40.000 0.00 0.00 0.00 0.98
291 292 4.789784 TGCTTGGTTCGTTGCTTTATAAC 58.210 39.130 0.00 0.00 0.00 1.89
292 293 4.276183 TGCTTGGTTCGTTGCTTTATAACA 59.724 37.500 0.00 0.00 0.00 2.41
293 294 5.048364 TGCTTGGTTCGTTGCTTTATAACAT 60.048 36.000 0.00 0.00 0.00 2.71
294 295 6.149640 TGCTTGGTTCGTTGCTTTATAACATA 59.850 34.615 0.00 0.00 0.00 2.29
295 296 7.148154 TGCTTGGTTCGTTGCTTTATAACATAT 60.148 33.333 0.00 0.00 0.00 1.78
296 297 8.339714 GCTTGGTTCGTTGCTTTATAACATATA 58.660 33.333 0.00 0.00 0.00 0.86
307 308 7.989416 CTTTATAACATATAAAGCGGGGGAA 57.011 36.000 13.84 0.00 35.59 3.97
308 309 8.398878 CTTTATAACATATAAAGCGGGGGAAA 57.601 34.615 13.84 0.00 35.59 3.13
309 310 7.748691 TTATAACATATAAAGCGGGGGAAAC 57.251 36.000 0.00 0.00 0.00 2.78
310 311 3.945640 ACATATAAAGCGGGGGAAACT 57.054 42.857 0.00 0.00 0.00 2.66
311 312 4.245251 ACATATAAAGCGGGGGAAACTT 57.755 40.909 0.00 0.00 0.00 2.66
312 313 4.606210 ACATATAAAGCGGGGGAAACTTT 58.394 39.130 0.00 0.00 37.40 2.66
313 314 5.020795 ACATATAAAGCGGGGGAAACTTTT 58.979 37.500 0.00 0.00 35.38 2.27
314 315 5.482526 ACATATAAAGCGGGGGAAACTTTTT 59.517 36.000 0.00 0.00 35.38 1.94
339 340 4.599036 AGCGGGGAAAAGCTTTGT 57.401 50.000 13.54 2.95 41.52 2.83
340 341 2.820845 AGCGGGGAAAAGCTTTGTT 58.179 47.368 13.54 0.00 41.52 2.83
341 342 1.119684 AGCGGGGAAAAGCTTTGTTT 58.880 45.000 13.54 0.00 41.52 2.83
342 343 1.202521 AGCGGGGAAAAGCTTTGTTTG 60.203 47.619 13.54 3.54 41.52 2.93
343 344 1.864565 CGGGGAAAAGCTTTGTTTGG 58.135 50.000 13.54 0.00 0.00 3.28
344 345 1.540146 CGGGGAAAAGCTTTGTTTGGG 60.540 52.381 13.54 0.00 0.00 4.12
345 346 1.202758 GGGGAAAAGCTTTGTTTGGGG 60.203 52.381 13.54 0.00 0.00 4.96
346 347 1.593196 GGAAAAGCTTTGTTTGGGGC 58.407 50.000 13.54 0.00 0.00 5.80
347 348 1.140852 GGAAAAGCTTTGTTTGGGGCT 59.859 47.619 13.54 0.00 36.53 5.19
348 349 2.212652 GAAAAGCTTTGTTTGGGGCTG 58.787 47.619 13.54 0.00 35.08 4.85
349 350 0.469494 AAAGCTTTGTTTGGGGCTGG 59.531 50.000 11.80 0.00 35.08 4.85
350 351 0.690744 AAGCTTTGTTTGGGGCTGGT 60.691 50.000 0.00 0.00 35.08 4.00
351 352 1.115326 AGCTTTGTTTGGGGCTGGTC 61.115 55.000 0.00 0.00 33.50 4.02
352 353 1.115326 GCTTTGTTTGGGGCTGGTCT 61.115 55.000 0.00 0.00 0.00 3.85
360 361 1.072505 GGGGCTGGTCTTCGTTGAA 59.927 57.895 0.00 0.00 0.00 2.69
361 362 0.322546 GGGGCTGGTCTTCGTTGAAT 60.323 55.000 0.00 0.00 0.00 2.57
363 364 0.169009 GGCTGGTCTTCGTTGAATGC 59.831 55.000 0.00 0.00 0.00 3.56
365 366 1.813513 CTGGTCTTCGTTGAATGCCT 58.186 50.000 0.00 0.00 0.00 4.75
502 520 9.883142 CTATTTTGAGTACTCCATCTCTCTTTT 57.117 33.333 20.11 0.00 0.00 2.27
514 532 8.640063 TCCATCTCTCTTTTGAAATGAAATGA 57.360 30.769 9.83 0.00 0.00 2.57
516 534 7.484007 CCATCTCTCTTTTGAAATGAAATGACG 59.516 37.037 9.83 0.00 0.00 4.35
518 536 7.576236 TCTCTCTTTTGAAATGAAATGACGAC 58.424 34.615 0.00 0.00 0.00 4.34
547 592 1.619827 CACATTTGCATGGTTCCCACT 59.380 47.619 0.00 0.00 35.80 4.00
550 595 1.786937 TTTGCATGGTTCCCACTGTT 58.213 45.000 0.00 0.00 35.80 3.16
553 598 2.235016 TGCATGGTTCCCACTGTTAAC 58.765 47.619 0.00 0.00 35.80 2.01
562 607 5.424573 GGTTCCCACTGTTAACTACTCCTAT 59.575 44.000 7.22 0.00 0.00 2.57
572 620 7.676947 TGTTAACTACTCCTATGAAAGCAAGT 58.323 34.615 7.22 0.00 0.00 3.16
646 694 1.476235 GCGGTGCCAAACAAACGAAC 61.476 55.000 0.00 0.00 33.96 3.95
676 724 2.189499 GCTTATCCAGGCGGGCAAG 61.189 63.158 3.78 11.57 36.21 4.01
697 745 7.012704 GGCAAGAGATTAATGCTGATTAACTCA 59.987 37.037 0.00 0.00 36.96 3.41
710 758 3.386768 TTAACTCACTGACAGGACAGC 57.613 47.619 7.51 0.00 41.06 4.40
711 759 1.123077 AACTCACTGACAGGACAGCA 58.877 50.000 7.51 0.00 41.06 4.41
712 760 1.123077 ACTCACTGACAGGACAGCAA 58.877 50.000 7.51 0.00 41.06 3.91
713 761 1.069823 ACTCACTGACAGGACAGCAAG 59.930 52.381 7.51 0.00 41.06 4.01
714 762 0.250038 TCACTGACAGGACAGCAAGC 60.250 55.000 7.51 0.00 41.06 4.01
715 763 1.072159 ACTGACAGGACAGCAAGCC 59.928 57.895 7.51 0.00 41.06 4.35
767 819 1.537348 CCGTCTGACCGTTTCTGTTCA 60.537 52.381 1.55 0.00 0.00 3.18
781 833 2.167861 GTTCACGGCCGAGATGAGC 61.168 63.158 35.90 22.99 0.00 4.26
782 834 3.371097 TTCACGGCCGAGATGAGCC 62.371 63.158 35.90 0.00 46.17 4.70
849 918 4.657824 GGCTAATCCCGCGCGCTA 62.658 66.667 30.48 15.18 0.00 4.26
1425 1542 1.364171 GAGCATGGACGAGGCGTAT 59.636 57.895 0.00 0.00 41.37 3.06
1635 1752 1.209128 CACCAGAATGATACCGTCGC 58.791 55.000 0.00 0.00 39.69 5.19
1636 1753 1.112113 ACCAGAATGATACCGTCGCT 58.888 50.000 0.00 0.00 39.69 4.93
1637 1754 1.067212 ACCAGAATGATACCGTCGCTC 59.933 52.381 0.00 0.00 39.69 5.03
1638 1755 1.399572 CAGAATGATACCGTCGCTCG 58.600 55.000 0.00 0.00 39.69 5.03
1665 1782 1.586154 CCGATGGTTGGTTGGTCTGC 61.586 60.000 0.00 0.00 0.00 4.26
1675 1792 2.867855 TTGGTCTGCTCGTTCCGCT 61.868 57.895 0.00 0.00 0.00 5.52
1832 1988 3.786635 TCTTTAGAGAGGATTGCTTCGC 58.213 45.455 0.00 0.00 0.00 4.70
1840 1996 0.729140 GGATTGCTTCGCGTGTTTGG 60.729 55.000 5.77 0.00 0.00 3.28
1844 2000 1.015109 TGCTTCGCGTGTTTGGTTTA 58.985 45.000 5.77 0.00 0.00 2.01
1914 2071 2.190161 GCTTTCGGTTGTTGGTTTGTC 58.810 47.619 0.00 0.00 0.00 3.18
1993 2150 0.171903 GGCTTGGCTTGTATGCACTG 59.828 55.000 0.00 0.00 34.04 3.66
2010 2167 0.109597 CTGCATGCCGTGTTCCTTTC 60.110 55.000 16.68 0.00 0.00 2.62
2015 2172 1.305201 TGCCGTGTTCCTTTCTTGTC 58.695 50.000 0.00 0.00 0.00 3.18
2018 2175 2.561569 CCGTGTTCCTTTCTTGTCAGT 58.438 47.619 0.00 0.00 0.00 3.41
2019 2176 2.287915 CCGTGTTCCTTTCTTGTCAGTG 59.712 50.000 0.00 0.00 0.00 3.66
2021 2178 2.945668 GTGTTCCTTTCTTGTCAGTGCT 59.054 45.455 0.00 0.00 0.00 4.40
2022 2179 3.002759 GTGTTCCTTTCTTGTCAGTGCTC 59.997 47.826 0.00 0.00 0.00 4.26
2023 2180 2.550180 GTTCCTTTCTTGTCAGTGCTCC 59.450 50.000 0.00 0.00 0.00 4.70
2024 2181 2.050144 TCCTTTCTTGTCAGTGCTCCT 58.950 47.619 0.00 0.00 0.00 3.69
2025 2182 2.439507 TCCTTTCTTGTCAGTGCTCCTT 59.560 45.455 0.00 0.00 0.00 3.36
2026 2183 3.117888 TCCTTTCTTGTCAGTGCTCCTTT 60.118 43.478 0.00 0.00 0.00 3.11
2027 2184 3.251972 CCTTTCTTGTCAGTGCTCCTTTC 59.748 47.826 0.00 0.00 0.00 2.62
2028 2185 3.845781 TTCTTGTCAGTGCTCCTTTCT 57.154 42.857 0.00 0.00 0.00 2.52
2029 2186 3.845781 TCTTGTCAGTGCTCCTTTCTT 57.154 42.857 0.00 0.00 0.00 2.52
2030 2187 3.470709 TCTTGTCAGTGCTCCTTTCTTG 58.529 45.455 0.00 0.00 0.00 3.02
2031 2188 3.118261 TCTTGTCAGTGCTCCTTTCTTGT 60.118 43.478 0.00 0.00 0.00 3.16
2032 2189 4.100963 TCTTGTCAGTGCTCCTTTCTTGTA 59.899 41.667 0.00 0.00 0.00 2.41
2033 2190 4.415881 TGTCAGTGCTCCTTTCTTGTAA 57.584 40.909 0.00 0.00 0.00 2.41
2034 2191 4.380531 TGTCAGTGCTCCTTTCTTGTAAG 58.619 43.478 0.00 0.00 0.00 2.34
2035 2192 3.187432 GTCAGTGCTCCTTTCTTGTAAGC 59.813 47.826 0.00 0.00 0.00 3.09
2036 2193 3.141398 CAGTGCTCCTTTCTTGTAAGCA 58.859 45.455 0.00 0.00 40.45 3.91
2038 2195 3.207265 TGCTCCTTTCTTGTAAGCACA 57.793 42.857 0.00 0.00 38.01 4.57
2039 2196 3.550820 TGCTCCTTTCTTGTAAGCACAA 58.449 40.909 0.00 0.00 42.39 3.33
2040 2197 4.144297 TGCTCCTTTCTTGTAAGCACAAT 58.856 39.130 0.00 0.00 43.58 2.71
2041 2198 4.216257 TGCTCCTTTCTTGTAAGCACAATC 59.784 41.667 0.00 0.00 43.58 2.67
2042 2199 4.457257 GCTCCTTTCTTGTAAGCACAATCT 59.543 41.667 0.00 0.00 43.58 2.40
2134 2294 3.079960 CATCAATCAGATGCAGGCAAC 57.920 47.619 0.00 0.00 46.90 4.17
2135 2295 2.203470 TCAATCAGATGCAGGCAACA 57.797 45.000 0.00 0.00 41.41 3.33
2136 2296 2.730382 TCAATCAGATGCAGGCAACAT 58.270 42.857 0.00 0.00 41.41 2.71
2137 2297 2.686405 TCAATCAGATGCAGGCAACATC 59.314 45.455 10.73 10.73 43.49 3.06
2138 2298 1.688772 ATCAGATGCAGGCAACATCC 58.311 50.000 14.02 0.51 44.08 3.51
2139 2299 0.622136 TCAGATGCAGGCAACATCCT 59.378 50.000 14.02 2.41 44.08 3.24
2146 2306 1.471119 CAGGCAACATCCTGCATTCT 58.529 50.000 0.00 0.00 46.11 2.40
2147 2307 1.822990 CAGGCAACATCCTGCATTCTT 59.177 47.619 0.00 0.00 46.11 2.52
2148 2308 2.232941 CAGGCAACATCCTGCATTCTTT 59.767 45.455 0.00 0.00 46.11 2.52
2149 2309 2.901839 AGGCAACATCCTGCATTCTTTT 59.098 40.909 0.00 0.00 44.52 2.27
2150 2310 4.082081 CAGGCAACATCCTGCATTCTTTTA 60.082 41.667 0.00 0.00 46.11 1.52
2151 2311 4.713321 AGGCAACATCCTGCATTCTTTTAT 59.287 37.500 0.00 0.00 44.52 1.40
2152 2312 5.188359 AGGCAACATCCTGCATTCTTTTATT 59.812 36.000 0.00 0.00 44.52 1.40
2153 2313 5.876460 GGCAACATCCTGCATTCTTTTATTT 59.124 36.000 0.00 0.00 44.52 1.40
2154 2314 6.183360 GGCAACATCCTGCATTCTTTTATTTG 60.183 38.462 0.00 0.00 44.52 2.32
2155 2315 6.369615 GCAACATCCTGCATTCTTTTATTTGT 59.630 34.615 0.00 0.00 42.17 2.83
2156 2316 7.095102 GCAACATCCTGCATTCTTTTATTTGTT 60.095 33.333 0.00 0.00 42.17 2.83
2157 2317 7.894376 ACATCCTGCATTCTTTTATTTGTTG 57.106 32.000 0.00 0.00 0.00 3.33
2158 2318 7.444299 ACATCCTGCATTCTTTTATTTGTTGT 58.556 30.769 0.00 0.00 0.00 3.32
2159 2319 8.584157 ACATCCTGCATTCTTTTATTTGTTGTA 58.416 29.630 0.00 0.00 0.00 2.41
2160 2320 9.421806 CATCCTGCATTCTTTTATTTGTTGTAA 57.578 29.630 0.00 0.00 0.00 2.41
2161 2321 8.810652 TCCTGCATTCTTTTATTTGTTGTAAC 57.189 30.769 0.00 0.00 0.00 2.50
2162 2322 8.637986 TCCTGCATTCTTTTATTTGTTGTAACT 58.362 29.630 0.00 0.00 0.00 2.24
2163 2323 9.260002 CCTGCATTCTTTTATTTGTTGTAACTT 57.740 29.630 0.00 0.00 0.00 2.66
2165 2325 9.809096 TGCATTCTTTTATTTGTTGTAACTTGA 57.191 25.926 0.00 0.00 0.00 3.02
2174 2334 9.809096 TTATTTGTTGTAACTTGAAATTCTGCA 57.191 25.926 0.00 0.00 0.00 4.41
2175 2335 7.754069 TTTGTTGTAACTTGAAATTCTGCAG 57.246 32.000 7.63 7.63 0.00 4.41
2176 2336 6.449635 TGTTGTAACTTGAAATTCTGCAGT 57.550 33.333 14.67 0.00 0.00 4.40
2177 2337 6.494842 TGTTGTAACTTGAAATTCTGCAGTC 58.505 36.000 14.67 4.21 0.00 3.51
2178 2338 6.094742 TGTTGTAACTTGAAATTCTGCAGTCA 59.905 34.615 14.67 7.16 0.00 3.41
2179 2339 6.691754 TGTAACTTGAAATTCTGCAGTCAA 57.308 33.333 14.67 14.64 0.00 3.18
2180 2340 7.275888 TGTAACTTGAAATTCTGCAGTCAAT 57.724 32.000 14.67 4.05 30.06 2.57
2181 2341 7.715657 TGTAACTTGAAATTCTGCAGTCAATT 58.284 30.769 14.67 10.45 30.06 2.32
2182 2342 8.196771 TGTAACTTGAAATTCTGCAGTCAATTT 58.803 29.630 20.27 20.27 35.38 1.82
2183 2343 9.677567 GTAACTTGAAATTCTGCAGTCAATTTA 57.322 29.630 20.21 18.36 33.31 1.40
2185 2345 9.768662 AACTTGAAATTCTGCAGTCAATTTATT 57.231 25.926 20.21 12.47 33.31 1.40
2186 2346 9.768662 ACTTGAAATTCTGCAGTCAATTTATTT 57.231 25.926 20.21 12.64 33.31 1.40
2188 2348 9.545105 TTGAAATTCTGCAGTCAATTTATTTGT 57.455 25.926 20.21 3.98 33.31 2.83
2189 2349 9.545105 TGAAATTCTGCAGTCAATTTATTTGTT 57.455 25.926 20.21 3.41 33.31 2.83
2190 2350 9.801714 GAAATTCTGCAGTCAATTTATTTGTTG 57.198 29.630 20.21 0.00 33.31 3.33
2191 2351 8.891671 AATTCTGCAGTCAATTTATTTGTTGT 57.108 26.923 14.67 0.00 36.65 3.32
2192 2352 9.979578 AATTCTGCAGTCAATTTATTTGTTGTA 57.020 25.926 14.67 0.00 36.65 2.41
2193 2353 9.979578 ATTCTGCAGTCAATTTATTTGTTGTAA 57.020 25.926 14.67 0.00 36.65 2.41
2194 2354 8.795786 TCTGCAGTCAATTTATTTGTTGTAAC 57.204 30.769 14.67 0.00 36.65 2.50
2195 2355 8.629158 TCTGCAGTCAATTTATTTGTTGTAACT 58.371 29.630 14.67 0.00 36.65 2.24
2196 2356 8.795786 TGCAGTCAATTTATTTGTTGTAACTC 57.204 30.769 0.00 0.00 36.65 3.01
2197 2357 7.589587 TGCAGTCAATTTATTTGTTGTAACTCG 59.410 33.333 0.00 0.00 36.65 4.18
2198 2358 7.801315 GCAGTCAATTTATTTGTTGTAACTCGA 59.199 33.333 0.00 0.00 36.65 4.04
2199 2359 9.318041 CAGTCAATTTATTTGTTGTAACTCGAG 57.682 33.333 11.84 11.84 36.65 4.04
2200 2360 9.268268 AGTCAATTTATTTGTTGTAACTCGAGA 57.732 29.630 21.68 0.00 36.65 4.04
2201 2361 9.314501 GTCAATTTATTTGTTGTAACTCGAGAC 57.685 33.333 21.68 8.51 36.65 3.36
2202 2362 9.047371 TCAATTTATTTGTTGTAACTCGAGACA 57.953 29.630 21.68 11.42 36.65 3.41
2203 2363 9.658475 CAATTTATTTGTTGTAACTCGAGACAA 57.342 29.630 21.68 17.10 33.23 3.18
2209 2369 6.403333 TGTTGTAACTCGAGACAATAATGC 57.597 37.500 21.68 8.28 37.84 3.56
2210 2370 5.061684 TGTTGTAACTCGAGACAATAATGCG 59.938 40.000 21.68 0.00 37.84 4.73
2211 2371 4.989044 TGTAACTCGAGACAATAATGCGA 58.011 39.130 21.68 0.00 0.00 5.10
2220 2380 5.896432 CGAGACAATAATGCGAACAACATAC 59.104 40.000 0.00 0.00 0.00 2.39
2243 2403 4.201910 CGTGCATTACAAAGATTAGTGGGG 60.202 45.833 0.00 0.00 0.00 4.96
2246 2406 5.652014 TGCATTACAAAGATTAGTGGGGAAG 59.348 40.000 0.00 0.00 0.00 3.46
2249 2409 7.093945 GCATTACAAAGATTAGTGGGGAAGAAA 60.094 37.037 0.00 0.00 0.00 2.52
2330 2503 9.485591 CGTAAATACCACATACATGAAGAAAAC 57.514 33.333 0.00 0.00 0.00 2.43
2337 2510 5.620822 CACATACATGAAGAAAACACACACG 59.379 40.000 0.00 0.00 0.00 4.49
2341 2514 4.334203 ACATGAAGAAAACACACACGCTAA 59.666 37.500 0.00 0.00 0.00 3.09
2359 2534 7.330700 ACACGCTAATTTCATAAAAACAATGGG 59.669 33.333 0.00 0.00 0.00 4.00
2421 2596 8.451908 AATTACTGCCAGACAAAACCTATATC 57.548 34.615 0.00 0.00 0.00 1.63
2422 2597 5.435686 ACTGCCAGACAAAACCTATATCA 57.564 39.130 0.00 0.00 0.00 2.15
2424 2599 5.882557 ACTGCCAGACAAAACCTATATCAAG 59.117 40.000 0.00 0.00 0.00 3.02
2426 2601 5.880332 TGCCAGACAAAACCTATATCAAGAC 59.120 40.000 0.00 0.00 0.00 3.01
2430 2605 8.141909 CCAGACAAAACCTATATCAAGACGATA 58.858 37.037 0.00 0.00 40.90 2.92
2431 2606 9.186323 CAGACAAAACCTATATCAAGACGATAG 57.814 37.037 0.00 0.00 39.98 2.08
2551 2726 2.691409 TAGAACCCACATGCAGCTAC 57.309 50.000 0.00 0.00 0.00 3.58
2577 2752 7.173562 CCCATACATGCCCAAATTATTTGATTG 59.826 37.037 18.13 11.63 43.26 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.325082 ACACGGCAAGGAATCACGC 61.325 57.895 0.00 0.00 0.00 5.34
1 2 0.948623 TCACACGGCAAGGAATCACG 60.949 55.000 0.00 0.00 0.00 4.35
2 3 1.453155 ATCACACGGCAAGGAATCAC 58.547 50.000 0.00 0.00 0.00 3.06
3 4 1.811965 CAATCACACGGCAAGGAATCA 59.188 47.619 0.00 0.00 0.00 2.57
4 5 2.083774 TCAATCACACGGCAAGGAATC 58.916 47.619 0.00 0.00 0.00 2.52
5 6 2.198827 TCAATCACACGGCAAGGAAT 57.801 45.000 0.00 0.00 0.00 3.01
6 7 1.811965 CATCAATCACACGGCAAGGAA 59.188 47.619 0.00 0.00 0.00 3.36
7 8 1.452110 CATCAATCACACGGCAAGGA 58.548 50.000 0.00 0.00 0.00 3.36
8 9 0.179156 GCATCAATCACACGGCAAGG 60.179 55.000 0.00 0.00 0.00 3.61
9 10 0.521867 CGCATCAATCACACGGCAAG 60.522 55.000 0.00 0.00 0.00 4.01
10 11 0.952984 TCGCATCAATCACACGGCAA 60.953 50.000 0.00 0.00 0.00 4.52
11 12 0.744057 ATCGCATCAATCACACGGCA 60.744 50.000 0.00 0.00 0.00 5.69
12 13 0.041839 GATCGCATCAATCACACGGC 60.042 55.000 0.00 0.00 0.00 5.68
13 14 1.575244 AGATCGCATCAATCACACGG 58.425 50.000 0.00 0.00 0.00 4.94
14 15 3.115554 TGTAGATCGCATCAATCACACG 58.884 45.455 0.00 0.00 0.00 4.49
15 16 5.469373 TTTGTAGATCGCATCAATCACAC 57.531 39.130 0.00 0.00 0.00 3.82
16 17 6.093909 ACATTTTGTAGATCGCATCAATCACA 59.906 34.615 0.00 0.00 0.00 3.58
17 18 6.412943 CACATTTTGTAGATCGCATCAATCAC 59.587 38.462 0.00 0.00 0.00 3.06
18 19 6.093909 ACACATTTTGTAGATCGCATCAATCA 59.906 34.615 0.00 0.00 36.32 2.57
19 20 6.412943 CACACATTTTGTAGATCGCATCAATC 59.587 38.462 0.00 0.00 35.67 2.67
20 21 6.260377 CACACATTTTGTAGATCGCATCAAT 58.740 36.000 0.00 0.00 35.67 2.57
21 22 5.391843 CCACACATTTTGTAGATCGCATCAA 60.392 40.000 0.00 0.00 35.67 2.57
22 23 4.094739 CCACACATTTTGTAGATCGCATCA 59.905 41.667 0.00 0.00 35.67 3.07
23 24 4.094887 ACCACACATTTTGTAGATCGCATC 59.905 41.667 0.00 0.00 35.67 3.91
24 25 4.009675 ACCACACATTTTGTAGATCGCAT 58.990 39.130 0.00 0.00 35.67 4.73
25 26 3.407698 ACCACACATTTTGTAGATCGCA 58.592 40.909 0.00 0.00 35.67 5.10
26 27 3.684788 AGACCACACATTTTGTAGATCGC 59.315 43.478 0.00 0.00 35.67 4.58
27 28 5.171476 AGAGACCACACATTTTGTAGATCG 58.829 41.667 0.00 0.00 35.67 3.69
28 29 7.602644 TGTAAGAGACCACACATTTTGTAGATC 59.397 37.037 0.00 0.00 35.67 2.75
29 30 7.450074 TGTAAGAGACCACACATTTTGTAGAT 58.550 34.615 0.00 0.00 35.67 1.98
30 31 6.822442 TGTAAGAGACCACACATTTTGTAGA 58.178 36.000 0.00 0.00 35.67 2.59
31 32 6.347725 GCTGTAAGAGACCACACATTTTGTAG 60.348 42.308 0.00 0.00 33.04 2.74
32 33 5.468746 GCTGTAAGAGACCACACATTTTGTA 59.531 40.000 0.00 0.00 33.04 2.41
33 34 4.275936 GCTGTAAGAGACCACACATTTTGT 59.724 41.667 0.00 0.00 35.06 2.83
34 35 4.516698 AGCTGTAAGAGACCACACATTTTG 59.483 41.667 0.00 0.00 34.07 2.44
35 36 4.718961 AGCTGTAAGAGACCACACATTTT 58.281 39.130 0.00 0.00 34.07 1.82
36 37 4.357918 AGCTGTAAGAGACCACACATTT 57.642 40.909 0.00 0.00 34.07 2.32
37 38 4.357918 AAGCTGTAAGAGACCACACATT 57.642 40.909 0.00 0.00 34.07 2.71
38 39 4.067896 CAAAGCTGTAAGAGACCACACAT 58.932 43.478 0.00 0.00 34.07 3.21
39 40 3.466836 CAAAGCTGTAAGAGACCACACA 58.533 45.455 0.00 0.00 34.07 3.72
40 41 2.808543 CCAAAGCTGTAAGAGACCACAC 59.191 50.000 0.00 0.00 34.07 3.82
41 42 2.703536 TCCAAAGCTGTAAGAGACCACA 59.296 45.455 0.00 0.00 34.07 4.17
42 43 3.402628 TCCAAAGCTGTAAGAGACCAC 57.597 47.619 0.00 0.00 34.07 4.16
43 44 4.134563 GTTTCCAAAGCTGTAAGAGACCA 58.865 43.478 0.00 0.00 34.07 4.02
44 45 3.502595 GGTTTCCAAAGCTGTAAGAGACC 59.497 47.826 0.00 0.00 34.07 3.85
45 46 3.186613 CGGTTTCCAAAGCTGTAAGAGAC 59.813 47.826 0.00 0.00 34.07 3.36
46 47 3.399330 CGGTTTCCAAAGCTGTAAGAGA 58.601 45.455 0.00 0.00 34.07 3.10
47 48 2.095718 GCGGTTTCCAAAGCTGTAAGAG 60.096 50.000 0.00 0.00 34.07 2.85
48 49 1.877443 GCGGTTTCCAAAGCTGTAAGA 59.123 47.619 0.00 0.00 34.07 2.10
49 50 1.880027 AGCGGTTTCCAAAGCTGTAAG 59.120 47.619 0.00 0.00 38.67 2.34
50 51 1.975660 AGCGGTTTCCAAAGCTGTAA 58.024 45.000 0.00 0.00 38.67 2.41
51 52 1.975660 AAGCGGTTTCCAAAGCTGTA 58.024 45.000 0.00 0.00 40.17 2.74
52 53 1.880027 CTAAGCGGTTTCCAAAGCTGT 59.120 47.619 4.64 0.00 40.17 4.40
53 54 1.401539 GCTAAGCGGTTTCCAAAGCTG 60.402 52.381 4.64 0.00 40.17 4.24
54 55 0.881796 GCTAAGCGGTTTCCAAAGCT 59.118 50.000 4.64 0.00 42.35 3.74
55 56 0.596082 TGCTAAGCGGTTTCCAAAGC 59.404 50.000 4.64 8.71 0.00 3.51
56 57 2.922335 GCTTGCTAAGCGGTTTCCAAAG 60.922 50.000 4.64 6.31 45.74 2.77
57 58 1.000717 GCTTGCTAAGCGGTTTCCAAA 60.001 47.619 4.64 0.00 45.74 3.28
58 59 0.596082 GCTTGCTAAGCGGTTTCCAA 59.404 50.000 4.64 8.53 45.74 3.53
59 60 2.253513 GCTTGCTAAGCGGTTTCCA 58.746 52.632 4.64 0.00 45.74 3.53
68 69 3.354131 GGTCTCTCCGCTTGCTAAG 57.646 57.895 0.00 0.00 0.00 2.18
79 80 3.140225 GATGGCGTCCCGGTCTCTC 62.140 68.421 0.00 0.00 0.00 3.20
80 81 3.148279 GATGGCGTCCCGGTCTCT 61.148 66.667 0.00 0.00 0.00 3.10
81 82 4.570663 CGATGGCGTCCCGGTCTC 62.571 72.222 0.00 0.00 0.00 3.36
83 84 4.867599 GTCGATGGCGTCCCGGTC 62.868 72.222 0.00 0.00 38.98 4.79
85 86 4.143333 AAGTCGATGGCGTCCCGG 62.143 66.667 0.14 0.00 38.98 5.73
86 87 2.582498 GAAGTCGATGGCGTCCCG 60.582 66.667 0.14 0.00 38.98 5.14
87 88 0.876342 GATGAAGTCGATGGCGTCCC 60.876 60.000 0.14 0.00 38.98 4.46
88 89 0.179111 TGATGAAGTCGATGGCGTCC 60.179 55.000 0.14 0.00 38.98 4.79
89 90 1.858091 ATGATGAAGTCGATGGCGTC 58.142 50.000 0.00 0.00 38.98 5.19
90 91 2.864097 GCTATGATGAAGTCGATGGCGT 60.864 50.000 0.00 0.00 38.98 5.68
91 92 1.723542 GCTATGATGAAGTCGATGGCG 59.276 52.381 0.00 0.00 39.35 5.69
92 93 2.735663 CAGCTATGATGAAGTCGATGGC 59.264 50.000 0.00 0.00 0.00 4.40
93 94 3.244009 ACCAGCTATGATGAAGTCGATGG 60.244 47.826 0.00 0.00 0.00 3.51
94 95 3.986572 GACCAGCTATGATGAAGTCGATG 59.013 47.826 0.00 0.00 0.00 3.84
95 96 3.894427 AGACCAGCTATGATGAAGTCGAT 59.106 43.478 0.00 0.00 0.00 3.59
96 97 3.291584 AGACCAGCTATGATGAAGTCGA 58.708 45.455 0.00 0.00 0.00 4.20
97 98 3.724508 AGACCAGCTATGATGAAGTCG 57.275 47.619 0.00 0.00 0.00 4.18
98 99 4.047822 CGAAGACCAGCTATGATGAAGTC 58.952 47.826 0.00 0.00 0.00 3.01
99 100 3.449018 ACGAAGACCAGCTATGATGAAGT 59.551 43.478 0.00 0.00 0.00 3.01
100 101 4.052159 ACGAAGACCAGCTATGATGAAG 57.948 45.455 0.00 0.00 0.00 3.02
101 102 4.160439 AGAACGAAGACCAGCTATGATGAA 59.840 41.667 0.00 0.00 0.00 2.57
102 103 3.701542 AGAACGAAGACCAGCTATGATGA 59.298 43.478 0.00 0.00 0.00 2.92
103 104 4.052159 AGAACGAAGACCAGCTATGATG 57.948 45.455 0.00 0.00 0.00 3.07
104 105 4.688021 GAAGAACGAAGACCAGCTATGAT 58.312 43.478 0.00 0.00 0.00 2.45
105 106 3.427638 CGAAGAACGAAGACCAGCTATGA 60.428 47.826 0.00 0.00 45.77 2.15
106 107 2.854777 CGAAGAACGAAGACCAGCTATG 59.145 50.000 0.00 0.00 45.77 2.23
107 108 2.159226 CCGAAGAACGAAGACCAGCTAT 60.159 50.000 0.00 0.00 45.77 2.97
108 109 1.201647 CCGAAGAACGAAGACCAGCTA 59.798 52.381 0.00 0.00 45.77 3.32
109 110 0.038159 CCGAAGAACGAAGACCAGCT 60.038 55.000 0.00 0.00 45.77 4.24
110 111 1.627550 GCCGAAGAACGAAGACCAGC 61.628 60.000 0.00 0.00 45.77 4.85
111 112 1.344942 CGCCGAAGAACGAAGACCAG 61.345 60.000 0.00 0.00 45.77 4.00
112 113 1.372499 CGCCGAAGAACGAAGACCA 60.372 57.895 0.00 0.00 45.77 4.02
113 114 1.342796 GACGCCGAAGAACGAAGACC 61.343 60.000 0.00 0.00 45.77 3.85
114 115 1.662845 CGACGCCGAAGAACGAAGAC 61.663 60.000 0.00 0.00 45.77 3.01
115 116 1.441515 CGACGCCGAAGAACGAAGA 60.442 57.895 0.00 0.00 45.77 2.87
116 117 2.434134 CCGACGCCGAAGAACGAAG 61.434 63.158 0.00 0.00 45.77 3.79
117 118 2.429571 CCGACGCCGAAGAACGAA 60.430 61.111 0.00 0.00 45.77 3.85
120 121 1.908066 AAATGCCGACGCCGAAGAAC 61.908 55.000 0.00 0.00 38.22 3.01
121 122 1.669760 AAATGCCGACGCCGAAGAA 60.670 52.632 0.00 0.00 38.22 2.52
122 123 2.047655 AAATGCCGACGCCGAAGA 60.048 55.556 0.00 0.00 38.22 2.87
123 124 2.098298 CAAATGCCGACGCCGAAG 59.902 61.111 0.00 0.00 38.22 3.79
124 125 4.096558 GCAAATGCCGACGCCGAA 62.097 61.111 0.00 0.00 38.22 4.30
134 135 3.880846 CGGAGGAGGCGCAAATGC 61.881 66.667 10.83 0.00 37.78 3.56
135 136 3.880846 GCGGAGGAGGCGCAAATG 61.881 66.667 10.83 0.00 0.00 2.32
144 145 1.622607 TAATGGTGGTGGCGGAGGAG 61.623 60.000 0.00 0.00 0.00 3.69
145 146 1.613928 TAATGGTGGTGGCGGAGGA 60.614 57.895 0.00 0.00 0.00 3.71
146 147 1.451387 GTAATGGTGGTGGCGGAGG 60.451 63.158 0.00 0.00 0.00 4.30
147 148 1.451387 GGTAATGGTGGTGGCGGAG 60.451 63.158 0.00 0.00 0.00 4.63
148 149 2.224877 TGGTAATGGTGGTGGCGGA 61.225 57.895 0.00 0.00 0.00 5.54
149 150 2.043980 GTGGTAATGGTGGTGGCGG 61.044 63.158 0.00 0.00 0.00 6.13
150 151 2.043980 GGTGGTAATGGTGGTGGCG 61.044 63.158 0.00 0.00 0.00 5.69
151 152 0.679960 GAGGTGGTAATGGTGGTGGC 60.680 60.000 0.00 0.00 0.00 5.01
152 153 0.034477 GGAGGTGGTAATGGTGGTGG 60.034 60.000 0.00 0.00 0.00 4.61
153 154 0.034477 GGGAGGTGGTAATGGTGGTG 60.034 60.000 0.00 0.00 0.00 4.17
154 155 1.559065 CGGGAGGTGGTAATGGTGGT 61.559 60.000 0.00 0.00 0.00 4.16
155 156 1.223487 CGGGAGGTGGTAATGGTGG 59.777 63.158 0.00 0.00 0.00 4.61
156 157 0.178068 CTCGGGAGGTGGTAATGGTG 59.822 60.000 0.00 0.00 0.00 4.17
157 158 1.623542 GCTCGGGAGGTGGTAATGGT 61.624 60.000 0.00 0.00 0.00 3.55
158 159 1.146263 GCTCGGGAGGTGGTAATGG 59.854 63.158 0.00 0.00 0.00 3.16
159 160 1.146263 GGCTCGGGAGGTGGTAATG 59.854 63.158 0.00 0.00 0.00 1.90
160 161 2.432300 CGGCTCGGGAGGTGGTAAT 61.432 63.158 0.00 0.00 0.00 1.89
161 162 3.072468 CGGCTCGGGAGGTGGTAA 61.072 66.667 0.00 0.00 0.00 2.85
172 173 1.941325 AAAGAAGCTAATCCGGCTCG 58.059 50.000 0.00 0.00 39.30 5.03
173 174 4.260825 GCTAAAAAGAAGCTAATCCGGCTC 60.261 45.833 0.00 0.00 39.30 4.70
174 175 3.628032 GCTAAAAAGAAGCTAATCCGGCT 59.372 43.478 0.00 0.00 42.31 5.52
175 176 3.953766 GCTAAAAAGAAGCTAATCCGGC 58.046 45.455 0.00 0.00 37.01 6.13
184 185 4.024893 GCCCAAACAAAGCTAAAAAGAAGC 60.025 41.667 0.00 0.00 40.40 3.86
185 186 5.359756 AGCCCAAACAAAGCTAAAAAGAAG 58.640 37.500 0.00 0.00 34.38 2.85
186 187 5.351948 AGCCCAAACAAAGCTAAAAAGAA 57.648 34.783 0.00 0.00 34.38 2.52
187 188 5.115480 CAAGCCCAAACAAAGCTAAAAAGA 58.885 37.500 0.00 0.00 35.30 2.52
188 189 4.875536 ACAAGCCCAAACAAAGCTAAAAAG 59.124 37.500 0.00 0.00 35.30 2.27
189 190 4.837972 ACAAGCCCAAACAAAGCTAAAAA 58.162 34.783 0.00 0.00 35.30 1.94
190 191 4.161377 AGACAAGCCCAAACAAAGCTAAAA 59.839 37.500 0.00 0.00 35.30 1.52
191 192 3.704061 AGACAAGCCCAAACAAAGCTAAA 59.296 39.130 0.00 0.00 35.30 1.85
192 193 3.295973 AGACAAGCCCAAACAAAGCTAA 58.704 40.909 0.00 0.00 35.30 3.09
193 194 2.944129 AGACAAGCCCAAACAAAGCTA 58.056 42.857 0.00 0.00 35.30 3.32
194 195 1.780503 AGACAAGCCCAAACAAAGCT 58.219 45.000 0.00 0.00 38.88 3.74
195 196 2.204237 CAAGACAAGCCCAAACAAAGC 58.796 47.619 0.00 0.00 0.00 3.51
196 197 2.159057 AGCAAGACAAGCCCAAACAAAG 60.159 45.455 0.00 0.00 0.00 2.77
197 198 1.830477 AGCAAGACAAGCCCAAACAAA 59.170 42.857 0.00 0.00 0.00 2.83
198 199 1.136695 CAGCAAGACAAGCCCAAACAA 59.863 47.619 0.00 0.00 0.00 2.83
199 200 0.746063 CAGCAAGACAAGCCCAAACA 59.254 50.000 0.00 0.00 0.00 2.83
200 201 0.746659 ACAGCAAGACAAGCCCAAAC 59.253 50.000 0.00 0.00 0.00 2.93
201 202 0.746063 CACAGCAAGACAAGCCCAAA 59.254 50.000 0.00 0.00 0.00 3.28
202 203 1.737355 GCACAGCAAGACAAGCCCAA 61.737 55.000 0.00 0.00 0.00 4.12
203 204 2.195567 GCACAGCAAGACAAGCCCA 61.196 57.895 0.00 0.00 0.00 5.36
204 205 2.647297 GCACAGCAAGACAAGCCC 59.353 61.111 0.00 0.00 0.00 5.19
205 206 2.647297 GGCACAGCAAGACAAGCC 59.353 61.111 0.00 0.00 34.71 4.35
206 207 2.647297 GGGCACAGCAAGACAAGC 59.353 61.111 0.00 0.00 0.00 4.01
207 208 2.270986 GGGGGCACAGCAAGACAAG 61.271 63.158 0.00 0.00 0.00 3.16
208 209 2.203480 GGGGGCACAGCAAGACAA 60.203 61.111 0.00 0.00 0.00 3.18
209 210 3.496309 CTGGGGGCACAGCAAGACA 62.496 63.158 0.00 0.00 0.00 3.41
210 211 2.674380 CTGGGGGCACAGCAAGAC 60.674 66.667 0.00 0.00 0.00 3.01
221 222 4.697756 TCAAAGTCGCGCTGGGGG 62.698 66.667 5.56 2.20 0.00 5.40
222 223 3.423154 GTCAAAGTCGCGCTGGGG 61.423 66.667 5.56 0.00 0.00 4.96
223 224 1.961277 AAGTCAAAGTCGCGCTGGG 60.961 57.895 5.56 0.00 0.00 4.45
224 225 1.205064 CAAGTCAAAGTCGCGCTGG 59.795 57.895 5.56 0.00 0.00 4.85
225 226 0.792640 ATCAAGTCAAAGTCGCGCTG 59.207 50.000 5.56 0.00 0.00 5.18
226 227 1.195448 CAATCAAGTCAAAGTCGCGCT 59.805 47.619 5.56 0.00 0.00 5.92
227 228 1.069906 ACAATCAAGTCAAAGTCGCGC 60.070 47.619 0.00 0.00 0.00 6.86
228 229 2.949714 ACAATCAAGTCAAAGTCGCG 57.050 45.000 0.00 0.00 0.00 5.87
229 230 6.017933 CAGAATACAATCAAGTCAAAGTCGC 58.982 40.000 0.00 0.00 0.00 5.19
230 231 7.121974 ACAGAATACAATCAAGTCAAAGTCG 57.878 36.000 0.00 0.00 0.00 4.18
231 232 9.209175 AGTACAGAATACAATCAAGTCAAAGTC 57.791 33.333 0.00 0.00 0.00 3.01
232 233 8.993121 CAGTACAGAATACAATCAAGTCAAAGT 58.007 33.333 0.00 0.00 0.00 2.66
233 234 8.993121 ACAGTACAGAATACAATCAAGTCAAAG 58.007 33.333 0.00 0.00 0.00 2.77
234 235 8.902540 ACAGTACAGAATACAATCAAGTCAAA 57.097 30.769 0.00 0.00 0.00 2.69
235 236 8.902540 AACAGTACAGAATACAATCAAGTCAA 57.097 30.769 0.00 0.00 0.00 3.18
238 239 9.944376 ACATAACAGTACAGAATACAATCAAGT 57.056 29.630 0.00 0.00 0.00 3.16
241 242 9.161629 CCAACATAACAGTACAGAATACAATCA 57.838 33.333 0.00 0.00 0.00 2.57
242 243 9.378551 TCCAACATAACAGTACAGAATACAATC 57.621 33.333 0.00 0.00 0.00 2.67
243 244 9.905713 ATCCAACATAACAGTACAGAATACAAT 57.094 29.630 0.00 0.00 0.00 2.71
244 245 9.161629 CATCCAACATAACAGTACAGAATACAA 57.838 33.333 0.00 0.00 0.00 2.41
245 246 7.279981 GCATCCAACATAACAGTACAGAATACA 59.720 37.037 0.00 0.00 0.00 2.29
246 247 7.495934 AGCATCCAACATAACAGTACAGAATAC 59.504 37.037 0.00 0.00 0.00 1.89
247 248 7.564793 AGCATCCAACATAACAGTACAGAATA 58.435 34.615 0.00 0.00 0.00 1.75
248 249 6.418101 AGCATCCAACATAACAGTACAGAAT 58.582 36.000 0.00 0.00 0.00 2.40
249 250 5.804639 AGCATCCAACATAACAGTACAGAA 58.195 37.500 0.00 0.00 0.00 3.02
250 251 5.420725 AGCATCCAACATAACAGTACAGA 57.579 39.130 0.00 0.00 0.00 3.41
251 252 5.163723 CCAAGCATCCAACATAACAGTACAG 60.164 44.000 0.00 0.00 0.00 2.74
252 253 4.699735 CCAAGCATCCAACATAACAGTACA 59.300 41.667 0.00 0.00 0.00 2.90
253 254 4.700213 ACCAAGCATCCAACATAACAGTAC 59.300 41.667 0.00 0.00 0.00 2.73
254 255 4.917385 ACCAAGCATCCAACATAACAGTA 58.083 39.130 0.00 0.00 0.00 2.74
255 256 3.766545 ACCAAGCATCCAACATAACAGT 58.233 40.909 0.00 0.00 0.00 3.55
256 257 4.672542 CGAACCAAGCATCCAACATAACAG 60.673 45.833 0.00 0.00 0.00 3.16
257 258 3.190327 CGAACCAAGCATCCAACATAACA 59.810 43.478 0.00 0.00 0.00 2.41
258 259 3.190535 ACGAACCAAGCATCCAACATAAC 59.809 43.478 0.00 0.00 0.00 1.89
259 260 3.417101 ACGAACCAAGCATCCAACATAA 58.583 40.909 0.00 0.00 0.00 1.90
260 261 3.066291 ACGAACCAAGCATCCAACATA 57.934 42.857 0.00 0.00 0.00 2.29
261 262 1.909700 ACGAACCAAGCATCCAACAT 58.090 45.000 0.00 0.00 0.00 2.71
262 263 1.336440 CAACGAACCAAGCATCCAACA 59.664 47.619 0.00 0.00 0.00 3.33
263 264 1.930371 GCAACGAACCAAGCATCCAAC 60.930 52.381 0.00 0.00 0.00 3.77
264 265 0.313672 GCAACGAACCAAGCATCCAA 59.686 50.000 0.00 0.00 0.00 3.53
265 266 0.537143 AGCAACGAACCAAGCATCCA 60.537 50.000 0.00 0.00 0.00 3.41
266 267 0.598065 AAGCAACGAACCAAGCATCC 59.402 50.000 0.00 0.00 0.00 3.51
267 268 2.422276 AAAGCAACGAACCAAGCATC 57.578 45.000 0.00 0.00 0.00 3.91
268 269 5.048364 TGTTATAAAGCAACGAACCAAGCAT 60.048 36.000 0.00 0.00 0.00 3.79
269 270 4.276183 TGTTATAAAGCAACGAACCAAGCA 59.724 37.500 0.00 0.00 0.00 3.91
270 271 4.789784 TGTTATAAAGCAACGAACCAAGC 58.210 39.130 0.00 0.00 0.00 4.01
283 284 7.989416 TTCCCCCGCTTTATATGTTATAAAG 57.011 36.000 17.06 17.06 41.86 1.85
284 285 8.000127 AGTTTCCCCCGCTTTATATGTTATAAA 59.000 33.333 0.00 1.11 0.00 1.40
285 286 7.519927 AGTTTCCCCCGCTTTATATGTTATAA 58.480 34.615 0.00 0.00 0.00 0.98
286 287 7.081857 AGTTTCCCCCGCTTTATATGTTATA 57.918 36.000 0.00 0.00 0.00 0.98
287 288 5.948842 AGTTTCCCCCGCTTTATATGTTAT 58.051 37.500 0.00 0.00 0.00 1.89
288 289 5.376756 AGTTTCCCCCGCTTTATATGTTA 57.623 39.130 0.00 0.00 0.00 2.41
289 290 4.245251 AGTTTCCCCCGCTTTATATGTT 57.755 40.909 0.00 0.00 0.00 2.71
290 291 3.945640 AGTTTCCCCCGCTTTATATGT 57.054 42.857 0.00 0.00 0.00 2.29
291 292 5.592104 AAAAGTTTCCCCCGCTTTATATG 57.408 39.130 0.00 0.00 32.81 1.78
315 316 4.409718 AAGCTTTTCCCCGCTTTAAAAA 57.590 36.364 0.00 0.00 43.43 1.94
322 323 1.119684 AAACAAAGCTTTTCCCCGCT 58.880 45.000 9.53 0.00 38.30 5.52
323 324 1.217001 CAAACAAAGCTTTTCCCCGC 58.783 50.000 9.53 0.00 0.00 6.13
324 325 1.540146 CCCAAACAAAGCTTTTCCCCG 60.540 52.381 9.53 0.00 0.00 5.73
325 326 1.202758 CCCCAAACAAAGCTTTTCCCC 60.203 52.381 9.53 0.00 0.00 4.81
326 327 1.813862 GCCCCAAACAAAGCTTTTCCC 60.814 52.381 9.53 0.00 0.00 3.97
327 328 1.140852 AGCCCCAAACAAAGCTTTTCC 59.859 47.619 9.53 0.00 29.27 3.13
328 329 2.212652 CAGCCCCAAACAAAGCTTTTC 58.787 47.619 9.53 0.00 31.93 2.29
329 330 1.134128 CCAGCCCCAAACAAAGCTTTT 60.134 47.619 9.53 0.00 31.93 2.27
330 331 0.469494 CCAGCCCCAAACAAAGCTTT 59.531 50.000 5.69 5.69 31.93 3.51
331 332 0.690744 ACCAGCCCCAAACAAAGCTT 60.691 50.000 0.00 0.00 31.93 3.74
332 333 1.075301 ACCAGCCCCAAACAAAGCT 60.075 52.632 0.00 0.00 35.52 3.74
333 334 1.115326 AGACCAGCCCCAAACAAAGC 61.115 55.000 0.00 0.00 0.00 3.51
334 335 1.341209 GAAGACCAGCCCCAAACAAAG 59.659 52.381 0.00 0.00 0.00 2.77
335 336 1.408969 GAAGACCAGCCCCAAACAAA 58.591 50.000 0.00 0.00 0.00 2.83
336 337 0.821711 CGAAGACCAGCCCCAAACAA 60.822 55.000 0.00 0.00 0.00 2.83
337 338 1.228124 CGAAGACCAGCCCCAAACA 60.228 57.895 0.00 0.00 0.00 2.83
338 339 0.822121 AACGAAGACCAGCCCCAAAC 60.822 55.000 0.00 0.00 0.00 2.93
339 340 0.821711 CAACGAAGACCAGCCCCAAA 60.822 55.000 0.00 0.00 0.00 3.28
340 341 1.228124 CAACGAAGACCAGCCCCAA 60.228 57.895 0.00 0.00 0.00 4.12
341 342 1.701031 TTCAACGAAGACCAGCCCCA 61.701 55.000 0.00 0.00 0.00 4.96
342 343 0.322546 ATTCAACGAAGACCAGCCCC 60.323 55.000 0.00 0.00 0.00 5.80
343 344 0.804989 CATTCAACGAAGACCAGCCC 59.195 55.000 0.00 0.00 0.00 5.19
344 345 0.169009 GCATTCAACGAAGACCAGCC 59.831 55.000 0.00 0.00 0.00 4.85
345 346 0.169009 GGCATTCAACGAAGACCAGC 59.831 55.000 0.00 0.00 0.00 4.85
346 347 1.813513 AGGCATTCAACGAAGACCAG 58.186 50.000 0.00 0.00 0.00 4.00
347 348 2.270352 AAGGCATTCAACGAAGACCA 57.730 45.000 0.00 0.00 0.00 4.02
348 349 2.293399 ACAAAGGCATTCAACGAAGACC 59.707 45.455 0.00 0.00 0.00 3.85
349 350 3.243068 ACACAAAGGCATTCAACGAAGAC 60.243 43.478 0.00 0.00 0.00 3.01
350 351 2.948979 ACACAAAGGCATTCAACGAAGA 59.051 40.909 0.00 0.00 0.00 2.87
351 352 3.044986 CACACAAAGGCATTCAACGAAG 58.955 45.455 0.00 0.00 0.00 3.79
352 353 2.685388 TCACACAAAGGCATTCAACGAA 59.315 40.909 0.00 0.00 0.00 3.85
360 361 7.151999 TCGTTTATAAATCACACAAAGGCAT 57.848 32.000 0.31 0.00 0.00 4.40
361 362 6.561737 TCGTTTATAAATCACACAAAGGCA 57.438 33.333 0.31 0.00 0.00 4.75
363 364 7.590279 ACCTTCGTTTATAAATCACACAAAGG 58.410 34.615 0.31 2.20 35.60 3.11
365 366 8.077386 GGAACCTTCGTTTATAAATCACACAAA 58.923 33.333 0.31 0.00 30.30 2.83
456 474 7.407393 AATAGTCTTCACTCCTACTTGTACC 57.593 40.000 0.00 0.00 33.62 3.34
502 520 3.120683 GCTCGTGTCGTCATTTCATTTCA 60.121 43.478 0.00 0.00 0.00 2.69
514 532 1.526887 CAAATGTGAAGCTCGTGTCGT 59.473 47.619 0.00 0.00 0.00 4.34
516 534 1.264020 TGCAAATGTGAAGCTCGTGTC 59.736 47.619 0.00 0.00 0.00 3.67
518 536 2.247637 CATGCAAATGTGAAGCTCGTG 58.752 47.619 0.00 0.00 0.00 4.35
547 592 7.676947 ACTTGCTTTCATAGGAGTAGTTAACA 58.323 34.615 8.61 0.00 0.00 2.41
550 595 7.328737 GGAACTTGCTTTCATAGGAGTAGTTA 58.671 38.462 0.00 0.00 0.00 2.24
553 598 4.806247 CGGAACTTGCTTTCATAGGAGTAG 59.194 45.833 0.00 0.00 0.00 2.57
562 607 2.218603 GGAGTTCGGAACTTGCTTTCA 58.781 47.619 23.17 0.00 43.03 2.69
646 694 1.152881 GATAAGCACCCTGGCCCTG 60.153 63.158 0.00 0.00 0.00 4.45
676 724 8.547069 GTCAGTGAGTTAATCAGCATTAATCTC 58.453 37.037 0.00 0.46 39.07 2.75
697 745 1.072159 GGCTTGCTGTCCTGTCAGT 59.928 57.895 0.00 0.00 37.70 3.41
710 758 2.126228 CATGTGCGGCTTGGCTTG 60.126 61.111 0.00 0.00 0.00 4.01
711 759 3.376078 CCATGTGCGGCTTGGCTT 61.376 61.111 0.00 0.00 35.92 4.35
712 760 3.866379 TTCCATGTGCGGCTTGGCT 62.866 57.895 0.00 0.00 40.93 4.75
713 761 3.346631 CTTCCATGTGCGGCTTGGC 62.347 63.158 0.00 0.00 40.93 4.52
714 762 2.703798 CCTTCCATGTGCGGCTTGG 61.704 63.158 0.00 6.21 42.09 3.61
715 763 2.879907 CCTTCCATGTGCGGCTTG 59.120 61.111 0.00 0.00 0.00 4.01
781 833 2.499685 GGAATCGTGGGTCTCGGG 59.500 66.667 0.00 0.00 0.00 5.14
782 834 2.104331 CGGAATCGTGGGTCTCGG 59.896 66.667 0.00 0.00 0.00 4.63
849 918 5.073311 GCCGATGGCGATGGTATATATAT 57.927 43.478 0.00 0.00 39.62 0.86
888 971 5.112686 ACGAGATGATAAAGGAGCTTTGTC 58.887 41.667 0.00 0.00 40.39 3.18
1274 1385 1.000607 CGTCCTCTGTTTCGTGGAAGA 60.001 52.381 0.00 0.00 30.82 2.87
1307 1418 2.437895 TCGATGGCGACCTCGTCT 60.438 61.111 15.73 0.00 45.41 4.18
1365 1482 1.822990 ACGTCCTCTTTTGCGGATCTA 59.177 47.619 0.00 0.00 35.55 1.98
1366 1483 0.608640 ACGTCCTCTTTTGCGGATCT 59.391 50.000 0.00 0.00 35.55 2.75
1367 1484 1.000145 GACGTCCTCTTTTGCGGATC 59.000 55.000 3.51 0.00 35.55 3.36
1368 1485 0.736325 CGACGTCCTCTTTTGCGGAT 60.736 55.000 10.58 0.00 35.55 4.18
1369 1486 1.372499 CGACGTCCTCTTTTGCGGA 60.372 57.895 10.58 0.00 0.00 5.54
1370 1487 1.663702 ACGACGTCCTCTTTTGCGG 60.664 57.895 10.58 0.00 0.00 5.69
1371 1488 1.487231 CACGACGTCCTCTTTTGCG 59.513 57.895 10.58 0.00 0.00 4.85
1372 1489 0.599204 TCCACGACGTCCTCTTTTGC 60.599 55.000 10.58 0.00 0.00 3.68
1373 1490 1.792949 CTTCCACGACGTCCTCTTTTG 59.207 52.381 10.58 0.00 0.00 2.44
1374 1491 1.684983 TCTTCCACGACGTCCTCTTTT 59.315 47.619 10.58 0.00 0.00 2.27
1401 1518 0.103026 CCTCGTCCATGCTCATCGAA 59.897 55.000 0.00 0.00 0.00 3.71
1648 1765 1.168714 GAGCAGACCAACCAACCATC 58.831 55.000 0.00 0.00 0.00 3.51
1655 1772 3.967715 GGAACGAGCAGACCAACC 58.032 61.111 0.00 0.00 0.00 3.77
1753 1887 4.320456 ACCAGACCGGCTGCTGTG 62.320 66.667 17.35 11.43 43.50 3.66
1754 1888 4.008933 GACCAGACCGGCTGCTGT 62.009 66.667 17.35 12.06 43.50 4.40
1755 1889 4.767255 GGACCAGACCGGCTGCTG 62.767 72.222 17.35 14.46 43.50 4.41
1758 1892 4.394712 GGTGGACCAGACCGGCTG 62.395 72.222 16.22 16.22 44.49 4.85
1759 1893 4.954118 TGGTGGACCAGACCGGCT 62.954 66.667 0.00 0.00 42.01 5.52
1914 2071 3.356529 AACCCACTAGAAGCAATCTGG 57.643 47.619 0.00 2.28 42.10 3.86
1993 2150 0.598065 AAGAAAGGAACACGGCATGC 59.402 50.000 9.90 9.90 0.00 4.06
2010 2167 3.209410 ACAAGAAAGGAGCACTGACAAG 58.791 45.455 0.00 0.00 0.00 3.16
2015 2172 3.141398 TGCTTACAAGAAAGGAGCACTG 58.859 45.455 0.00 0.00 38.33 3.66
2018 2175 3.207265 TGTGCTTACAAGAAAGGAGCA 57.793 42.857 0.00 0.00 40.70 4.26
2019 2176 4.457257 AGATTGTGCTTACAAGAAAGGAGC 59.543 41.667 0.00 0.00 32.69 4.70
2021 2178 6.959639 AAAGATTGTGCTTACAAGAAAGGA 57.040 33.333 0.00 0.00 32.69 3.36
2022 2179 9.696917 ATAAAAAGATTGTGCTTACAAGAAAGG 57.303 29.630 0.00 0.00 32.69 3.11
2029 2186 8.547069 GCAACAAATAAAAAGATTGTGCTTACA 58.453 29.630 0.00 0.00 37.36 2.41
2030 2187 8.547069 TGCAACAAATAAAAAGATTGTGCTTAC 58.453 29.630 0.00 0.00 37.36 2.34
2031 2188 8.654230 TGCAACAAATAAAAAGATTGTGCTTA 57.346 26.923 0.00 0.00 37.36 3.09
2032 2189 7.551035 TGCAACAAATAAAAAGATTGTGCTT 57.449 28.000 0.00 0.00 37.36 3.91
2033 2190 7.227116 ACATGCAACAAATAAAAAGATTGTGCT 59.773 29.630 0.00 0.00 37.36 4.40
2034 2191 7.354257 ACATGCAACAAATAAAAAGATTGTGC 58.646 30.769 0.00 0.00 37.36 4.57
2040 2197 9.809096 TCAAGTTACATGCAACAAATAAAAAGA 57.191 25.926 11.35 0.00 0.00 2.52
2054 2211 6.423905 TGACTGTAGACTTTCAAGTTACATGC 59.576 38.462 11.69 9.09 39.88 4.06
2098 2258 9.152327 TCTGATTGATGATTACTGTAGAATCCT 57.848 33.333 1.89 0.00 33.18 3.24
2130 2290 6.369615 ACAAATAAAAGAATGCAGGATGTTGC 59.630 34.615 0.00 0.00 44.33 4.17
2131 2291 7.894376 ACAAATAAAAGAATGCAGGATGTTG 57.106 32.000 0.00 0.00 39.31 3.33
2132 2292 7.933033 ACAACAAATAAAAGAATGCAGGATGTT 59.067 29.630 0.00 0.00 39.31 2.71
2133 2293 7.444299 ACAACAAATAAAAGAATGCAGGATGT 58.556 30.769 0.00 0.00 39.31 3.06
2134 2294 7.894376 ACAACAAATAAAAGAATGCAGGATG 57.106 32.000 0.00 0.00 40.87 3.51
2135 2295 9.423061 GTTACAACAAATAAAAGAATGCAGGAT 57.577 29.630 0.00 0.00 0.00 3.24
2136 2296 8.637986 AGTTACAACAAATAAAAGAATGCAGGA 58.362 29.630 0.00 0.00 0.00 3.86
2137 2297 8.816640 AGTTACAACAAATAAAAGAATGCAGG 57.183 30.769 0.00 0.00 0.00 4.85
2139 2299 9.809096 TCAAGTTACAACAAATAAAAGAATGCA 57.191 25.926 0.00 0.00 0.00 3.96
2148 2308 9.809096 TGCAGAATTTCAAGTTACAACAAATAA 57.191 25.926 0.00 0.00 0.00 1.40
2149 2309 9.462174 CTGCAGAATTTCAAGTTACAACAAATA 57.538 29.630 8.42 0.00 0.00 1.40
2150 2310 7.981225 ACTGCAGAATTTCAAGTTACAACAAAT 59.019 29.630 23.35 0.00 0.00 2.32
2151 2311 7.319646 ACTGCAGAATTTCAAGTTACAACAAA 58.680 30.769 23.35 0.00 0.00 2.83
2152 2312 6.862209 ACTGCAGAATTTCAAGTTACAACAA 58.138 32.000 23.35 0.00 0.00 2.83
2153 2313 6.094742 TGACTGCAGAATTTCAAGTTACAACA 59.905 34.615 23.35 0.00 0.00 3.33
2154 2314 6.494842 TGACTGCAGAATTTCAAGTTACAAC 58.505 36.000 23.35 0.00 0.00 3.32
2155 2315 6.691754 TGACTGCAGAATTTCAAGTTACAA 57.308 33.333 23.35 0.00 0.00 2.41
2156 2316 6.691754 TTGACTGCAGAATTTCAAGTTACA 57.308 33.333 23.35 0.00 0.00 2.41
2157 2317 8.579682 AAATTGACTGCAGAATTTCAAGTTAC 57.420 30.769 23.35 0.00 35.23 2.50
2159 2319 9.768662 AATAAATTGACTGCAGAATTTCAAGTT 57.231 25.926 24.41 24.41 39.07 2.66
2160 2320 9.768662 AAATAAATTGACTGCAGAATTTCAAGT 57.231 25.926 23.35 15.79 34.42 3.16
2162 2322 9.545105 ACAAATAAATTGACTGCAGAATTTCAA 57.455 25.926 23.35 19.47 41.85 2.69
2163 2323 9.545105 AACAAATAAATTGACTGCAGAATTTCA 57.455 25.926 23.35 10.95 41.85 2.69
2164 2324 9.801714 CAACAAATAAATTGACTGCAGAATTTC 57.198 29.630 23.35 8.02 41.85 2.17
2165 2325 9.328845 ACAACAAATAAATTGACTGCAGAATTT 57.671 25.926 23.35 22.76 41.85 1.82
2166 2326 8.891671 ACAACAAATAAATTGACTGCAGAATT 57.108 26.923 23.35 13.98 41.85 2.17
2167 2327 9.979578 TTACAACAAATAAATTGACTGCAGAAT 57.020 25.926 23.35 7.87 41.85 2.40
2168 2328 9.243637 GTTACAACAAATAAATTGACTGCAGAA 57.756 29.630 23.35 5.34 41.85 3.02
2169 2329 8.629158 AGTTACAACAAATAAATTGACTGCAGA 58.371 29.630 23.35 0.00 41.85 4.26
2170 2330 8.801715 AGTTACAACAAATAAATTGACTGCAG 57.198 30.769 13.48 13.48 41.85 4.41
2171 2331 7.589587 CGAGTTACAACAAATAAATTGACTGCA 59.410 33.333 0.00 0.00 41.85 4.41
2172 2332 7.801315 TCGAGTTACAACAAATAAATTGACTGC 59.199 33.333 0.00 0.00 41.85 4.40
2173 2333 9.318041 CTCGAGTTACAACAAATAAATTGACTG 57.682 33.333 3.62 0.00 41.85 3.51
2174 2334 9.268268 TCTCGAGTTACAACAAATAAATTGACT 57.732 29.630 13.13 0.00 41.85 3.41
2175 2335 9.314501 GTCTCGAGTTACAACAAATAAATTGAC 57.685 33.333 13.13 0.00 41.85 3.18
2176 2336 9.047371 TGTCTCGAGTTACAACAAATAAATTGA 57.953 29.630 13.13 0.00 41.85 2.57
2177 2337 9.658475 TTGTCTCGAGTTACAACAAATAAATTG 57.342 29.630 13.13 0.00 44.95 2.32
2183 2343 7.962918 GCATTATTGTCTCGAGTTACAACAAAT 59.037 33.333 18.70 17.18 38.35 2.32
2184 2344 7.295201 GCATTATTGTCTCGAGTTACAACAAA 58.705 34.615 18.70 16.05 38.35 2.83
2185 2345 6.400621 CGCATTATTGTCTCGAGTTACAACAA 60.401 38.462 18.70 17.42 38.35 2.83
2186 2346 5.061684 CGCATTATTGTCTCGAGTTACAACA 59.938 40.000 18.70 10.26 38.35 3.33
2187 2347 5.287752 TCGCATTATTGTCTCGAGTTACAAC 59.712 40.000 18.70 7.87 38.35 3.32
2188 2348 5.404096 TCGCATTATTGTCTCGAGTTACAA 58.596 37.500 18.64 18.64 39.73 2.41
2189 2349 4.989044 TCGCATTATTGTCTCGAGTTACA 58.011 39.130 13.13 7.64 0.00 2.41
2190 2350 5.287752 TGTTCGCATTATTGTCTCGAGTTAC 59.712 40.000 13.13 4.71 0.00 2.50
2191 2351 5.404096 TGTTCGCATTATTGTCTCGAGTTA 58.596 37.500 13.13 0.00 0.00 2.24
2192 2352 4.242475 TGTTCGCATTATTGTCTCGAGTT 58.758 39.130 13.13 0.00 0.00 3.01
2193 2353 3.845178 TGTTCGCATTATTGTCTCGAGT 58.155 40.909 13.13 0.00 0.00 4.18
2194 2354 4.091365 TGTTGTTCGCATTATTGTCTCGAG 59.909 41.667 5.93 5.93 0.00 4.04
2195 2355 3.991121 TGTTGTTCGCATTATTGTCTCGA 59.009 39.130 0.00 0.00 0.00 4.04
2196 2356 4.320667 TGTTGTTCGCATTATTGTCTCG 57.679 40.909 0.00 0.00 0.00 4.04
2197 2357 5.896432 CGTATGTTGTTCGCATTATTGTCTC 59.104 40.000 0.00 0.00 0.00 3.36
2198 2358 5.350365 ACGTATGTTGTTCGCATTATTGTCT 59.650 36.000 0.00 0.00 0.00 3.41
2199 2359 5.447846 CACGTATGTTGTTCGCATTATTGTC 59.552 40.000 0.00 0.00 0.00 3.18
2200 2360 5.320723 CACGTATGTTGTTCGCATTATTGT 58.679 37.500 0.00 0.00 0.00 2.71
2201 2361 4.202158 GCACGTATGTTGTTCGCATTATTG 59.798 41.667 0.00 0.00 0.00 1.90
2202 2362 4.142795 TGCACGTATGTTGTTCGCATTATT 60.143 37.500 0.00 0.00 0.00 1.40
2203 2363 3.372514 TGCACGTATGTTGTTCGCATTAT 59.627 39.130 0.00 0.00 0.00 1.28
2204 2364 2.737252 TGCACGTATGTTGTTCGCATTA 59.263 40.909 0.00 0.00 0.00 1.90
2205 2365 1.533299 TGCACGTATGTTGTTCGCATT 59.467 42.857 0.00 0.00 0.00 3.56
2206 2366 1.152510 TGCACGTATGTTGTTCGCAT 58.847 45.000 0.00 0.00 0.00 4.73
2207 2367 1.152510 ATGCACGTATGTTGTTCGCA 58.847 45.000 0.00 0.11 0.00 5.10
2208 2368 2.241259 AATGCACGTATGTTGTTCGC 57.759 45.000 0.00 0.00 0.00 4.70
2209 2369 4.314948 TGTAATGCACGTATGTTGTTCG 57.685 40.909 0.00 0.00 0.00 3.95
2210 2370 6.367421 TCTTTGTAATGCACGTATGTTGTTC 58.633 36.000 0.00 0.00 0.00 3.18
2211 2371 6.307031 TCTTTGTAATGCACGTATGTTGTT 57.693 33.333 0.00 0.00 0.00 2.83
2220 2380 4.201910 CCCCACTAATCTTTGTAATGCACG 60.202 45.833 0.00 0.00 0.00 5.34
2249 2409 6.212888 AGTGCTTCTTGTCAATCTTGTTTT 57.787 33.333 0.00 0.00 0.00 2.43
2252 2412 5.179045 CAAGTGCTTCTTGTCAATCTTGT 57.821 39.130 11.95 0.00 45.89 3.16
2330 2503 7.616103 TGTTTTTATGAAATTAGCGTGTGTG 57.384 32.000 0.00 0.00 0.00 3.82
2332 2505 8.161610 CCATTGTTTTTATGAAATTAGCGTGTG 58.838 33.333 0.00 0.00 0.00 3.82
2337 2510 7.065683 CACCCCCATTGTTTTTATGAAATTAGC 59.934 37.037 0.00 0.00 0.00 3.09
2341 2514 6.694445 TCACCCCCATTGTTTTTATGAAAT 57.306 33.333 0.00 0.00 0.00 2.17
2359 2534 3.971245 TTTTTATGGCACCATTCACCC 57.029 42.857 7.63 0.00 37.82 4.61
2392 2567 5.128663 AGGTTTTGTCTGGCAGTAATTTGTT 59.871 36.000 15.27 0.00 0.00 2.83
2421 2596 3.261580 TCACCATGCAACTATCGTCTTG 58.738 45.455 0.00 0.00 0.00 3.02
2422 2597 3.610040 TCACCATGCAACTATCGTCTT 57.390 42.857 0.00 0.00 0.00 3.01
2424 2599 3.871006 TCAATCACCATGCAACTATCGTC 59.129 43.478 0.00 0.00 0.00 4.20
2426 2601 4.753610 AGATCAATCACCATGCAACTATCG 59.246 41.667 0.00 0.00 0.00 2.92
2430 2605 3.959293 TGAGATCAATCACCATGCAACT 58.041 40.909 0.00 0.00 0.00 3.16
2431 2606 4.418392 GTTGAGATCAATCACCATGCAAC 58.582 43.478 0.00 0.00 38.24 4.17
2433 2608 3.018856 GGTTGAGATCAATCACCATGCA 58.981 45.455 0.91 0.00 36.96 3.96
2438 2613 4.142138 ACTCTACGGTTGAGATCAATCACC 60.142 45.833 23.09 0.06 36.80 4.02
2439 2614 5.000012 ACTCTACGGTTGAGATCAATCAC 58.000 43.478 23.09 0.00 36.80 3.06
2551 2726 6.172136 TCAAATAATTTGGGCATGTATGGG 57.828 37.500 0.00 0.00 40.98 4.00
2577 2752 8.900983 AGGATCTTCACTCTAAAGAATATTGC 57.099 34.615 0.00 0.00 36.41 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.