Multiple sequence alignment - TraesCS5B01G190600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G190600 chr5B 100.000 4313 0 0 1 4313 344613666 344609354 0.000000e+00 7965.0
1 TraesCS5B01G190600 chr5B 87.500 176 11 6 4140 4312 413714654 413714487 4.400000e-45 193.0
2 TraesCS5B01G190600 chr5A 92.018 1992 102 22 18 1974 395918869 395920838 0.000000e+00 2745.0
3 TraesCS5B01G190600 chr5A 89.555 1551 105 24 2181 3714 395920885 395922395 0.000000e+00 1914.0
4 TraesCS5B01G190600 chr5A 94.152 171 10 0 3973 4143 395924217 395924387 1.190000e-65 261.0
5 TraesCS5B01G190600 chr5A 83.916 286 14 7 3696 3976 395922413 395922671 1.200000e-60 244.0
6 TraesCS5B01G190600 chr5D 89.133 1822 125 35 2175 3976 301570664 301568896 0.000000e+00 2200.0
7 TraesCS5B01G190600 chr5D 94.518 912 37 7 12 919 301572758 301571856 0.000000e+00 1395.0
8 TraesCS5B01G190600 chr5D 89.342 1079 57 20 936 1974 301571766 301570706 0.000000e+00 1303.0
9 TraesCS5B01G190600 chr5D 90.588 170 12 4 4143 4312 496936195 496936360 5.610000e-54 222.0
10 TraesCS5B01G190600 chr5D 94.286 35 2 0 3934 3968 499412630 499412596 2.000000e-03 54.7
11 TraesCS5B01G190600 chrUn 94.313 422 12 1 1514 1923 476732137 476731716 1.690000e-178 636.0
12 TraesCS5B01G190600 chr7B 93.567 171 7 4 4142 4312 219853098 219852932 7.160000e-63 252.0
13 TraesCS5B01G190600 chr2B 91.176 170 11 4 4144 4312 711304115 711303949 1.210000e-55 228.0
14 TraesCS5B01G190600 chr2B 97.143 35 1 0 3934 3968 428791630 428791664 4.660000e-05 60.2
15 TraesCS5B01G190600 chr1A 90.419 167 12 4 4146 4312 282720530 282720368 2.610000e-52 217.0
16 TraesCS5B01G190600 chr1D 89.412 170 14 4 4144 4313 214249957 214249792 1.220000e-50 211.0
17 TraesCS5B01G190600 chr4A 88.571 175 12 7 4144 4312 259921683 259921855 5.650000e-49 206.0
18 TraesCS5B01G190600 chr4A 97.143 35 1 0 3934 3968 580896074 580896040 4.660000e-05 60.2
19 TraesCS5B01G190600 chr6B 89.809 157 13 3 4144 4300 384203907 384204060 9.460000e-47 198.0
20 TraesCS5B01G190600 chr6B 88.166 169 16 4 4144 4312 457613957 457613793 9.460000e-47 198.0
21 TraesCS5B01G190600 chr6A 95.000 40 1 1 3929 3968 562706292 562706330 1.300000e-05 62.1
22 TraesCS5B01G190600 chr1B 97.222 36 1 0 3933 3968 602170862 602170827 1.300000e-05 62.1
23 TraesCS5B01G190600 chr7D 97.059 34 1 0 3935 3968 614282399 614282366 1.680000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G190600 chr5B 344609354 344613666 4312 True 7965.000000 7965 100.000000 1 4313 1 chr5B.!!$R1 4312
1 TraesCS5B01G190600 chr5A 395918869 395924387 5518 False 1291.000000 2745 89.910250 18 4143 4 chr5A.!!$F1 4125
2 TraesCS5B01G190600 chr5D 301568896 301572758 3862 True 1632.666667 2200 90.997667 12 3976 3 chr5D.!!$R2 3964

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
900 905 0.955919 CCTGACGGTCAAGAAAGCCC 60.956 60.0 12.54 0.0 0.0 5.19 F
1832 1948 0.529555 GAGATCGAGGCTCTTGTGGC 60.530 60.0 13.50 0.0 0.0 5.01 F
2068 2186 0.034186 TGTGCTCCTTTGCCTATGGG 60.034 55.0 0.00 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2049 2167 0.034186 CCCATAGGCAAAGGAGCACA 60.034 55.0 0.0 0.0 35.83 4.57 R
3213 3342 0.315251 GGCCTTTGACTTTGCTGACC 59.685 55.0 0.0 0.0 0.00 4.02 R
4026 5752 0.169009 GCCTCGTTCTTCAATGGTGC 59.831 55.0 0.0 0.0 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 1.153765 CTTGCCAGCGTCGATGAGA 60.154 57.895 12.96 0.00 0.00 3.27
213 214 1.965930 GCCAACATCACACCGAGCA 60.966 57.895 0.00 0.00 0.00 4.26
242 244 3.065925 ACTGTGAGAAAGCAGAACAAAGC 59.934 43.478 0.00 0.00 36.62 3.51
248 250 1.953559 AAGCAGAACAAAGCGAGTCA 58.046 45.000 0.00 0.00 35.48 3.41
271 273 1.801395 CGGCGGTTGATAACGAGATGT 60.801 52.381 0.00 0.00 0.00 3.06
376 378 1.535015 GGAAGATGAGCTCCGACTTCG 60.535 57.143 24.42 0.00 38.13 3.79
537 541 7.933728 ATGCAATTACGATTGTATACGTACA 57.066 32.000 0.00 0.00 43.78 2.90
538 542 7.384358 TGCAATTACGATTGTATACGTACAG 57.616 36.000 0.00 0.00 43.67 2.74
900 905 0.955919 CCTGACGGTCAAGAAAGCCC 60.956 60.000 12.54 0.00 0.00 5.19
905 910 4.103103 GTCAAGAAAGCCCCGCGC 62.103 66.667 0.00 0.00 37.98 6.86
950 1028 2.912956 ACATGTGGGTCAATAGTCCAGT 59.087 45.455 0.00 0.00 0.00 4.00
981 1059 2.106338 TCACTGACATGTGGGTCAACAT 59.894 45.455 1.15 0.00 46.36 2.71
1054 1132 3.257127 CGTCTCTTTCTTCTCCCACTTCT 59.743 47.826 0.00 0.00 0.00 2.85
1089 1175 0.914644 TCTCCTCTCCCAATTGCCAG 59.085 55.000 0.00 0.00 0.00 4.85
1096 1182 1.198094 TCCCAATTGCCAGAGTCCGA 61.198 55.000 0.00 0.00 0.00 4.55
1105 1191 1.384525 CCAGAGTCCGAATCTCTCGT 58.615 55.000 0.00 0.00 46.65 4.18
1106 1192 1.064803 CCAGAGTCCGAATCTCTCGTG 59.935 57.143 0.00 0.00 46.65 4.35
1138 1224 1.139734 GAGCACGCAGGAGATCGAA 59.860 57.895 0.00 0.00 0.00 3.71
1186 1272 4.265056 ACCCCCACAGGCACGAAC 62.265 66.667 0.00 0.00 0.00 3.95
1188 1274 3.953775 CCCCACAGGCACGAACCT 61.954 66.667 0.00 0.00 42.30 3.50
1189 1275 2.589157 CCCCACAGGCACGAACCTA 61.589 63.158 0.67 0.00 38.26 3.08
1201 1287 3.250040 GCACGAACCTATCTCTCTCTCTC 59.750 52.174 0.00 0.00 0.00 3.20
1207 1293 5.815233 ACCTATCTCTCTCTCTCTCTCTG 57.185 47.826 0.00 0.00 0.00 3.35
1306 1392 1.399089 GGATAGGCTAGATCGCTCGTC 59.601 57.143 0.00 0.00 0.00 4.20
1357 1443 1.178276 CTTGCCGTCTCTAGTGGAGT 58.822 55.000 3.16 0.00 42.40 3.85
1359 1445 1.139947 GCCGTCTCTAGTGGAGTGC 59.860 63.158 3.16 2.07 42.40 4.40
1360 1446 1.810532 CCGTCTCTAGTGGAGTGCC 59.189 63.158 3.16 0.00 42.40 5.01
1361 1447 0.965866 CCGTCTCTAGTGGAGTGCCA 60.966 60.000 3.16 0.00 43.47 4.92
1371 1469 1.285950 GGAGTGCCAAAAGGTTCGC 59.714 57.895 0.00 0.00 0.00 4.70
1387 1485 4.547367 GCCGCGGTTAGCTGGGAT 62.547 66.667 28.70 0.00 45.59 3.85
1393 1491 1.889573 GGTTAGCTGGGATCGCAGC 60.890 63.158 42.15 42.15 44.20 5.25
1419 1517 2.183478 ACCATGTCGATTTGTGCAGA 57.817 45.000 0.00 0.00 0.00 4.26
1446 1550 2.158871 TGAAGTTGTAGGCGACCAGTTT 60.159 45.455 0.00 0.00 0.00 2.66
1447 1551 3.069872 TGAAGTTGTAGGCGACCAGTTTA 59.930 43.478 0.00 0.00 0.00 2.01
1475 1579 3.974871 TTTCCTGTTTGTTACCGAAGC 57.025 42.857 0.00 0.00 0.00 3.86
1479 1583 2.616842 CCTGTTTGTTACCGAAGCACTT 59.383 45.455 0.00 0.00 0.00 3.16
1587 1691 3.426191 CGTGTTGCTGTTCCAATTCATTG 59.574 43.478 0.00 0.00 37.52 2.82
1588 1692 4.370917 GTGTTGCTGTTCCAATTCATTGT 58.629 39.130 0.00 0.00 36.06 2.71
1589 1693 5.527951 GTGTTGCTGTTCCAATTCATTGTA 58.472 37.500 0.00 0.00 36.06 2.41
1591 1695 6.089820 GTGTTGCTGTTCCAATTCATTGTATG 59.910 38.462 0.00 0.00 36.06 2.39
1631 1747 6.087291 CGAGTGCAAATCTCTTGTTTCATTTC 59.913 38.462 0.00 0.00 0.00 2.17
1695 1811 1.523711 CAACAGAGTGGTGGTGCGT 60.524 57.895 0.00 0.00 29.70 5.24
1832 1948 0.529555 GAGATCGAGGCTCTTGTGGC 60.530 60.000 13.50 0.00 0.00 5.01
1873 1989 4.096003 ACCATTCCAGTCCCCGCG 62.096 66.667 0.00 0.00 0.00 6.46
1904 2020 7.666804 GGAGGGTGGTAATTTACTTAAGTTGAA 59.333 37.037 14.49 9.74 0.00 2.69
1926 2042 9.691362 TTGAAGTCATTTTGCCTAATTTAACTC 57.309 29.630 0.00 0.00 0.00 3.01
1956 2073 7.807977 AGTATTGCTCCAATTACATACCTTG 57.192 36.000 0.00 0.00 35.54 3.61
1958 2075 8.052748 AGTATTGCTCCAATTACATACCTTGAA 58.947 33.333 0.00 0.00 35.54 2.69
1969 2087 8.978874 ATTACATACCTTGAATTATGCTCACA 57.021 30.769 0.00 0.00 0.00 3.58
1974 2092 6.299805 ACCTTGAATTATGCTCACAGTAGA 57.700 37.500 0.00 0.00 0.00 2.59
1975 2093 6.711277 ACCTTGAATTATGCTCACAGTAGAA 58.289 36.000 0.00 0.00 0.00 2.10
1976 2094 7.168219 ACCTTGAATTATGCTCACAGTAGAAA 58.832 34.615 0.00 0.00 0.00 2.52
1984 2102 8.893219 TTATGCTCACAGTAGAAATTAGATGG 57.107 34.615 0.00 0.00 0.00 3.51
1985 2103 5.674525 TGCTCACAGTAGAAATTAGATGGG 58.325 41.667 0.00 0.00 0.00 4.00
1986 2104 5.425217 TGCTCACAGTAGAAATTAGATGGGA 59.575 40.000 0.00 0.00 0.00 4.37
1989 2107 7.633772 GCTCACAGTAGAAATTAGATGGGAAGA 60.634 40.741 0.00 0.00 0.00 2.87
1990 2108 8.146053 TCACAGTAGAAATTAGATGGGAAGAA 57.854 34.615 0.00 0.00 0.00 2.52
1991 2109 8.602424 TCACAGTAGAAATTAGATGGGAAGAAA 58.398 33.333 0.00 0.00 0.00 2.52
1992 2110 8.887717 CACAGTAGAAATTAGATGGGAAGAAAG 58.112 37.037 0.00 0.00 0.00 2.62
1993 2111 8.826765 ACAGTAGAAATTAGATGGGAAGAAAGA 58.173 33.333 0.00 0.00 0.00 2.52
1994 2112 9.844257 CAGTAGAAATTAGATGGGAAGAAAGAT 57.156 33.333 0.00 0.00 0.00 2.40
1995 2113 9.844257 AGTAGAAATTAGATGGGAAGAAAGATG 57.156 33.333 0.00 0.00 0.00 2.90
1996 2114 9.061435 GTAGAAATTAGATGGGAAGAAAGATGG 57.939 37.037 0.00 0.00 0.00 3.51
1997 2115 7.065504 AGAAATTAGATGGGAAGAAAGATGGG 58.934 38.462 0.00 0.00 0.00 4.00
1999 2117 7.465900 AATTAGATGGGAAGAAAGATGGGTA 57.534 36.000 0.00 0.00 0.00 3.69
2000 2118 6.500589 TTAGATGGGAAGAAAGATGGGTAG 57.499 41.667 0.00 0.00 0.00 3.18
2001 2119 3.718956 AGATGGGAAGAAAGATGGGTAGG 59.281 47.826 0.00 0.00 0.00 3.18
2002 2120 3.214694 TGGGAAGAAAGATGGGTAGGA 57.785 47.619 0.00 0.00 0.00 2.94
2003 2121 3.747852 TGGGAAGAAAGATGGGTAGGAT 58.252 45.455 0.00 0.00 0.00 3.24
2004 2122 4.903149 TGGGAAGAAAGATGGGTAGGATA 58.097 43.478 0.00 0.00 0.00 2.59
2007 2125 5.607171 GGGAAGAAAGATGGGTAGGATAAGA 59.393 44.000 0.00 0.00 0.00 2.10
2008 2126 6.239743 GGGAAGAAAGATGGGTAGGATAAGAG 60.240 46.154 0.00 0.00 0.00 2.85
2009 2127 6.555360 GGAAGAAAGATGGGTAGGATAAGAGA 59.445 42.308 0.00 0.00 0.00 3.10
2010 2128 7.256154 GGAAGAAAGATGGGTAGGATAAGAGAG 60.256 44.444 0.00 0.00 0.00 3.20
2011 2129 6.081356 AGAAAGATGGGTAGGATAAGAGAGG 58.919 44.000 0.00 0.00 0.00 3.69
2012 2130 5.688220 AAGATGGGTAGGATAAGAGAGGA 57.312 43.478 0.00 0.00 0.00 3.71
2013 2131 5.688220 AGATGGGTAGGATAAGAGAGGAA 57.312 43.478 0.00 0.00 0.00 3.36
2014 2132 5.399113 AGATGGGTAGGATAAGAGAGGAAC 58.601 45.833 0.00 0.00 0.00 3.62
2015 2133 4.620086 TGGGTAGGATAAGAGAGGAACA 57.380 45.455 0.00 0.00 0.00 3.18
2016 2134 4.955335 TGGGTAGGATAAGAGAGGAACAA 58.045 43.478 0.00 0.00 0.00 2.83
2017 2135 4.715297 TGGGTAGGATAAGAGAGGAACAAC 59.285 45.833 0.00 0.00 0.00 3.32
2018 2136 4.715297 GGGTAGGATAAGAGAGGAACAACA 59.285 45.833 0.00 0.00 0.00 3.33
2019 2137 5.189145 GGGTAGGATAAGAGAGGAACAACAA 59.811 44.000 0.00 0.00 0.00 2.83
2020 2138 6.126739 GGGTAGGATAAGAGAGGAACAACAAT 60.127 42.308 0.00 0.00 0.00 2.71
2021 2139 6.763610 GGTAGGATAAGAGAGGAACAACAATG 59.236 42.308 0.00 0.00 0.00 2.82
2022 2140 5.749462 AGGATAAGAGAGGAACAACAATGG 58.251 41.667 0.00 0.00 0.00 3.16
2023 2141 5.251700 AGGATAAGAGAGGAACAACAATGGT 59.748 40.000 0.00 0.00 0.00 3.55
2024 2142 5.586643 GGATAAGAGAGGAACAACAATGGTC 59.413 44.000 0.00 0.00 42.87 4.02
2034 2152 5.942872 GAACAACAATGGTCCAATAGAGTG 58.057 41.667 0.00 0.00 37.29 3.51
2035 2153 5.241403 ACAACAATGGTCCAATAGAGTGA 57.759 39.130 0.00 0.00 0.00 3.41
2036 2154 5.630121 ACAACAATGGTCCAATAGAGTGAA 58.370 37.500 0.00 0.00 0.00 3.18
2037 2155 6.068010 ACAACAATGGTCCAATAGAGTGAAA 58.932 36.000 0.00 0.00 0.00 2.69
2038 2156 6.549364 ACAACAATGGTCCAATAGAGTGAAAA 59.451 34.615 0.00 0.00 0.00 2.29
2039 2157 7.233348 ACAACAATGGTCCAATAGAGTGAAAAT 59.767 33.333 0.00 0.00 0.00 1.82
2040 2158 7.781324 ACAATGGTCCAATAGAGTGAAAATT 57.219 32.000 0.00 0.00 0.00 1.82
2041 2159 7.830739 ACAATGGTCCAATAGAGTGAAAATTC 58.169 34.615 0.00 0.00 0.00 2.17
2042 2160 7.451255 ACAATGGTCCAATAGAGTGAAAATTCA 59.549 33.333 0.00 0.00 34.20 2.57
2061 2179 2.669364 CACATCTTTGTGCTCCTTTGC 58.331 47.619 0.00 0.00 46.20 3.68
2062 2180 1.615392 ACATCTTTGTGCTCCTTTGCC 59.385 47.619 0.00 0.00 33.85 4.52
2063 2181 1.891150 CATCTTTGTGCTCCTTTGCCT 59.109 47.619 0.00 0.00 0.00 4.75
2064 2182 2.949177 TCTTTGTGCTCCTTTGCCTA 57.051 45.000 0.00 0.00 0.00 3.93
2065 2183 3.439857 TCTTTGTGCTCCTTTGCCTAT 57.560 42.857 0.00 0.00 0.00 2.57
2066 2184 3.084039 TCTTTGTGCTCCTTTGCCTATG 58.916 45.455 0.00 0.00 0.00 2.23
2067 2185 1.838112 TTGTGCTCCTTTGCCTATGG 58.162 50.000 0.00 0.00 0.00 2.74
2068 2186 0.034186 TGTGCTCCTTTGCCTATGGG 60.034 55.000 0.00 0.00 0.00 4.00
2069 2187 0.753111 GTGCTCCTTTGCCTATGGGG 60.753 60.000 0.00 0.00 38.36 4.96
2080 2198 2.459555 CCTATGGGGCTTGTCCAATT 57.540 50.000 0.00 0.00 37.87 2.32
2081 2199 2.034124 CCTATGGGGCTTGTCCAATTG 58.966 52.381 0.00 0.00 37.87 2.32
2082 2200 2.358090 CCTATGGGGCTTGTCCAATTGA 60.358 50.000 7.12 0.00 37.87 2.57
2083 2201 1.856629 ATGGGGCTTGTCCAATTGAG 58.143 50.000 7.12 0.00 37.87 3.02
2084 2202 0.776810 TGGGGCTTGTCCAATTGAGA 59.223 50.000 7.12 0.00 36.21 3.27
2085 2203 1.272092 TGGGGCTTGTCCAATTGAGAG 60.272 52.381 7.12 0.31 36.21 3.20
2086 2204 1.272147 GGGGCTTGTCCAATTGAGAGT 60.272 52.381 7.12 0.00 36.21 3.24
2087 2205 1.815003 GGGCTTGTCCAATTGAGAGTG 59.185 52.381 7.12 0.00 36.21 3.51
2088 2206 2.508526 GGCTTGTCCAATTGAGAGTGT 58.491 47.619 7.12 0.00 34.01 3.55
2089 2207 2.887152 GGCTTGTCCAATTGAGAGTGTT 59.113 45.455 7.12 0.00 34.01 3.32
2090 2208 3.319122 GGCTTGTCCAATTGAGAGTGTTT 59.681 43.478 7.12 0.00 34.01 2.83
2091 2209 4.518970 GGCTTGTCCAATTGAGAGTGTTTA 59.481 41.667 7.12 0.00 34.01 2.01
2092 2210 5.183904 GGCTTGTCCAATTGAGAGTGTTTAT 59.816 40.000 7.12 0.00 34.01 1.40
2093 2211 6.374333 GGCTTGTCCAATTGAGAGTGTTTATA 59.626 38.462 7.12 0.00 34.01 0.98
2094 2212 7.244192 GCTTGTCCAATTGAGAGTGTTTATAC 58.756 38.462 7.12 0.00 0.00 1.47
2095 2213 7.626452 GCTTGTCCAATTGAGAGTGTTTATACC 60.626 40.741 7.12 0.00 0.00 2.73
2096 2214 6.774673 TGTCCAATTGAGAGTGTTTATACCA 58.225 36.000 7.12 0.00 0.00 3.25
2097 2215 6.653320 TGTCCAATTGAGAGTGTTTATACCAC 59.347 38.462 7.12 0.00 0.00 4.16
2098 2216 6.879458 GTCCAATTGAGAGTGTTTATACCACT 59.121 38.462 7.12 4.33 45.52 4.00
2109 2227 8.691661 AGTGTTTATACCACTCAAATTGTTCT 57.308 30.769 0.00 0.00 38.81 3.01
2110 2228 9.131791 AGTGTTTATACCACTCAAATTGTTCTT 57.868 29.630 0.00 0.00 38.81 2.52
2111 2229 9.744468 GTGTTTATACCACTCAAATTGTTCTTT 57.256 29.630 0.00 0.00 0.00 2.52
2116 2234 6.773976 ACCACTCAAATTGTTCTTTTCTGA 57.226 33.333 0.00 0.00 0.00 3.27
2117 2235 7.169158 ACCACTCAAATTGTTCTTTTCTGAA 57.831 32.000 0.00 0.00 0.00 3.02
2118 2236 7.035612 ACCACTCAAATTGTTCTTTTCTGAAC 58.964 34.615 0.00 0.00 44.60 3.18
2119 2237 6.476706 CCACTCAAATTGTTCTTTTCTGAACC 59.523 38.462 5.15 0.00 43.96 3.62
2120 2238 6.197096 CACTCAAATTGTTCTTTTCTGAACCG 59.803 38.462 5.15 0.00 43.96 4.44
2121 2239 6.094881 ACTCAAATTGTTCTTTTCTGAACCGA 59.905 34.615 5.15 0.00 43.96 4.69
2122 2240 6.494842 TCAAATTGTTCTTTTCTGAACCGAG 58.505 36.000 5.15 0.00 43.96 4.63
2123 2241 6.094881 TCAAATTGTTCTTTTCTGAACCGAGT 59.905 34.615 5.15 0.00 43.96 4.18
2124 2242 5.674933 ATTGTTCTTTTCTGAACCGAGTC 57.325 39.130 5.15 0.00 43.96 3.36
2125 2243 4.402056 TGTTCTTTTCTGAACCGAGTCT 57.598 40.909 5.15 0.00 43.96 3.24
2126 2244 5.524971 TGTTCTTTTCTGAACCGAGTCTA 57.475 39.130 5.15 0.00 43.96 2.59
2127 2245 5.287226 TGTTCTTTTCTGAACCGAGTCTAC 58.713 41.667 5.15 0.00 43.96 2.59
2128 2246 4.516365 TCTTTTCTGAACCGAGTCTACC 57.484 45.455 0.00 0.00 0.00 3.18
2129 2247 4.150359 TCTTTTCTGAACCGAGTCTACCT 58.850 43.478 0.00 0.00 0.00 3.08
2130 2248 5.319453 TCTTTTCTGAACCGAGTCTACCTA 58.681 41.667 0.00 0.00 0.00 3.08
2131 2249 5.771666 TCTTTTCTGAACCGAGTCTACCTAA 59.228 40.000 0.00 0.00 0.00 2.69
2132 2250 5.640189 TTTCTGAACCGAGTCTACCTAAG 57.360 43.478 0.00 0.00 0.00 2.18
2133 2251 4.298103 TCTGAACCGAGTCTACCTAAGT 57.702 45.455 0.00 0.00 0.00 2.24
2134 2252 4.660168 TCTGAACCGAGTCTACCTAAGTT 58.340 43.478 0.00 0.00 0.00 2.66
2135 2253 5.809001 TCTGAACCGAGTCTACCTAAGTTA 58.191 41.667 0.00 0.00 0.00 2.24
2136 2254 5.645497 TCTGAACCGAGTCTACCTAAGTTAC 59.355 44.000 0.00 0.00 0.00 2.50
2137 2255 5.316167 TGAACCGAGTCTACCTAAGTTACA 58.684 41.667 0.00 0.00 0.00 2.41
2138 2256 5.769662 TGAACCGAGTCTACCTAAGTTACAA 59.230 40.000 0.00 0.00 0.00 2.41
2139 2257 5.635417 ACCGAGTCTACCTAAGTTACAAC 57.365 43.478 0.00 0.00 0.00 3.32
2140 2258 4.460731 ACCGAGTCTACCTAAGTTACAACC 59.539 45.833 0.00 0.00 0.00 3.77
2141 2259 4.704057 CCGAGTCTACCTAAGTTACAACCT 59.296 45.833 0.00 0.00 0.00 3.50
2142 2260 5.184671 CCGAGTCTACCTAAGTTACAACCTT 59.815 44.000 0.00 0.00 0.00 3.50
2143 2261 6.375455 CCGAGTCTACCTAAGTTACAACCTTA 59.625 42.308 0.00 0.00 0.00 2.69
2144 2262 7.414984 CCGAGTCTACCTAAGTTACAACCTTAG 60.415 44.444 0.00 0.00 0.00 2.18
2151 2269 6.723131 CTAAGTTACAACCTTAGGACTTGC 57.277 41.667 4.77 0.00 0.00 4.01
2152 2270 4.017177 AGTTACAACCTTAGGACTTGCC 57.983 45.455 4.77 0.00 0.00 4.52
2153 2271 3.393278 AGTTACAACCTTAGGACTTGCCA 59.607 43.478 4.77 0.00 40.02 4.92
2154 2272 4.042934 AGTTACAACCTTAGGACTTGCCAT 59.957 41.667 4.77 0.00 40.02 4.40
2155 2273 3.525800 ACAACCTTAGGACTTGCCATT 57.474 42.857 4.77 0.00 40.02 3.16
2156 2274 3.844640 ACAACCTTAGGACTTGCCATTT 58.155 40.909 4.77 0.00 40.02 2.32
2157 2275 4.223144 ACAACCTTAGGACTTGCCATTTT 58.777 39.130 4.77 0.00 40.02 1.82
2158 2276 4.039124 ACAACCTTAGGACTTGCCATTTTG 59.961 41.667 4.77 0.00 40.02 2.44
2159 2277 2.562738 ACCTTAGGACTTGCCATTTTGC 59.437 45.455 4.77 0.00 40.02 3.68
2160 2278 2.562298 CCTTAGGACTTGCCATTTTGCA 59.438 45.455 0.00 0.00 40.02 4.08
2179 2297 5.868043 TGCAATAGAAGCAATCATATCCG 57.132 39.130 0.00 0.00 39.39 4.18
2187 2305 4.558538 AGCAATCATATCCGCAAGTTTC 57.441 40.909 0.00 0.00 0.00 2.78
2257 2376 5.344128 GCTTTGTGTTGAATGCTAAGACATG 59.656 40.000 0.00 0.00 32.37 3.21
2265 2384 0.983467 TGCTAAGACATGGGCTCACA 59.017 50.000 0.00 0.00 0.00 3.58
2270 2389 1.067295 AGACATGGGCTCACAGGAAA 58.933 50.000 0.00 0.00 0.00 3.13
2288 2407 5.811613 CAGGAAATTTCTGTTTGCTGTTTCA 59.188 36.000 17.42 0.00 46.23 2.69
2289 2408 6.480981 CAGGAAATTTCTGTTTGCTGTTTCAT 59.519 34.615 17.42 0.00 46.23 2.57
2344 2463 7.549488 GTGATGAACTATTAAGCTGTTGTAGGT 59.451 37.037 0.00 0.00 39.21 3.08
2353 2472 2.172717 AGCTGTTGTAGGTTTCTGTGGT 59.827 45.455 0.00 0.00 31.87 4.16
2355 2474 4.041691 AGCTGTTGTAGGTTTCTGTGGTAT 59.958 41.667 0.00 0.00 31.87 2.73
2356 2475 4.760204 GCTGTTGTAGGTTTCTGTGGTATT 59.240 41.667 0.00 0.00 0.00 1.89
2357 2476 5.240844 GCTGTTGTAGGTTTCTGTGGTATTT 59.759 40.000 0.00 0.00 0.00 1.40
2358 2477 6.238925 GCTGTTGTAGGTTTCTGTGGTATTTT 60.239 38.462 0.00 0.00 0.00 1.82
2359 2478 7.266922 TGTTGTAGGTTTCTGTGGTATTTTC 57.733 36.000 0.00 0.00 0.00 2.29
2396 2515 6.736123 TGAGAAGAGTAGTGTTCTGTGTAAC 58.264 40.000 14.31 0.50 36.45 2.50
2416 2535 3.983741 ACGGAGTTCTGTTTTCTGAGAG 58.016 45.455 0.00 0.00 37.78 3.20
2422 2541 4.651503 AGTTCTGTTTTCTGAGAGACTGGA 59.348 41.667 5.56 0.00 0.00 3.86
2438 2557 7.436933 AGAGACTGGAAACATTTGAATTTTCC 58.563 34.615 15.67 15.67 45.85 3.13
2448 2567 6.109359 ACATTTGAATTTTCCGTTTTGTCCA 58.891 32.000 0.00 0.00 0.00 4.02
2466 2585 3.518303 GTCCAAGGTGTTATGGAGGTAGT 59.482 47.826 0.00 0.00 46.01 2.73
2472 2591 3.009805 GGTGTTATGGAGGTAGTTTGGGT 59.990 47.826 0.00 0.00 0.00 4.51
2473 2592 4.007659 GTGTTATGGAGGTAGTTTGGGTG 58.992 47.826 0.00 0.00 0.00 4.61
2506 2625 9.575868 TTTGAGGTTTATAACTTAACATCACCA 57.424 29.630 0.00 0.00 42.53 4.17
2507 2626 9.575868 TTGAGGTTTATAACTTAACATCACCAA 57.424 29.630 0.00 0.00 42.53 3.67
2508 2627 9.226606 TGAGGTTTATAACTTAACATCACCAAG 57.773 33.333 0.00 0.00 39.33 3.61
2509 2628 9.444600 GAGGTTTATAACTTAACATCACCAAGA 57.555 33.333 0.00 0.00 35.70 3.02
2510 2629 9.227777 AGGTTTATAACTTAACATCACCAAGAC 57.772 33.333 1.25 0.00 0.00 3.01
2511 2630 9.227777 GGTTTATAACTTAACATCACCAAGACT 57.772 33.333 0.00 0.00 0.00 3.24
2523 2642 8.181904 ACATCACCAAGACTTTGAAACAATAT 57.818 30.769 0.00 0.00 36.36 1.28
2524 2643 9.295825 ACATCACCAAGACTTTGAAACAATATA 57.704 29.630 0.00 0.00 36.36 0.86
2565 2684 7.703298 TTCAAGCATGAAAAATGTTTCTGAG 57.297 32.000 9.75 1.31 42.47 3.35
2567 2686 6.919662 TCAAGCATGAAAAATGTTTCTGAGAC 59.080 34.615 9.75 0.00 43.13 3.36
2569 2688 6.989659 AGCATGAAAAATGTTTCTGAGACAT 58.010 32.000 9.75 7.92 43.13 3.06
2575 2694 8.131100 TGAAAAATGTTTCTGAGACATCACTTC 58.869 33.333 13.44 14.74 43.13 3.01
2580 2699 7.290110 TGTTTCTGAGACATCACTTCTCTAA 57.710 36.000 0.00 0.00 40.30 2.10
2586 2705 7.394641 TCTGAGACATCACTTCTCTAAAAGCTA 59.605 37.037 0.00 0.00 40.30 3.32
2608 2727 1.838112 TACAAAGCAGGCCTTCCATG 58.162 50.000 0.00 2.50 31.99 3.66
2611 2730 2.170166 CAAAGCAGGCCTTCCATGTTA 58.830 47.619 0.00 0.00 31.99 2.41
2614 2733 3.951563 AGCAGGCCTTCCATGTTAATA 57.048 42.857 0.00 0.00 33.74 0.98
2619 2738 5.684704 CAGGCCTTCCATGTTAATAGAAGA 58.315 41.667 0.00 0.00 34.52 2.87
2623 2742 7.673926 AGGCCTTCCATGTTAATAGAAGAAAAA 59.326 33.333 0.00 0.00 34.52 1.94
2664 2783 6.079712 ACAAGAAGGGCAAAGGATAATAGT 57.920 37.500 0.00 0.00 0.00 2.12
2678 2799 8.798975 AAGGATAATAGTACCTCCTGAAATCA 57.201 34.615 0.00 0.00 38.15 2.57
2692 2813 7.358770 TCCTGAAATCAAGTTTGGAAATTCA 57.641 32.000 0.00 0.00 0.00 2.57
2693 2814 7.965718 TCCTGAAATCAAGTTTGGAAATTCAT 58.034 30.769 0.00 0.00 0.00 2.57
2694 2815 8.431222 TCCTGAAATCAAGTTTGGAAATTCATT 58.569 29.630 0.00 0.00 0.00 2.57
2695 2816 9.059260 CCTGAAATCAAGTTTGGAAATTCATTT 57.941 29.630 0.00 0.00 0.00 2.32
2697 2818 9.610705 TGAAATCAAGTTTGGAAATTCATTTCA 57.389 25.926 13.10 8.20 46.03 2.69
2698 2819 9.868389 GAAATCAAGTTTGGAAATTCATTTCAC 57.132 29.630 13.10 4.45 46.03 3.18
2699 2820 7.967890 ATCAAGTTTGGAAATTCATTTCACC 57.032 32.000 13.10 0.00 46.03 4.02
2700 2821 7.123355 TCAAGTTTGGAAATTCATTTCACCT 57.877 32.000 13.10 2.00 46.03 4.00
2701 2822 7.563906 TCAAGTTTGGAAATTCATTTCACCTT 58.436 30.769 13.10 6.80 46.03 3.50
2702 2823 7.495279 TCAAGTTTGGAAATTCATTTCACCTTG 59.505 33.333 13.10 15.24 46.03 3.61
2703 2824 6.888105 AGTTTGGAAATTCATTTCACCTTGT 58.112 32.000 13.10 0.00 46.03 3.16
2704 2825 7.337938 AGTTTGGAAATTCATTTCACCTTGTT 58.662 30.769 13.10 0.00 46.03 2.83
2705 2826 7.280652 AGTTTGGAAATTCATTTCACCTTGTTG 59.719 33.333 13.10 0.00 46.03 3.33
2706 2827 6.477053 TGGAAATTCATTTCACCTTGTTGA 57.523 33.333 13.10 0.00 46.03 3.18
2707 2828 6.514947 TGGAAATTCATTTCACCTTGTTGAG 58.485 36.000 13.10 0.00 46.03 3.02
2708 2829 5.928264 GGAAATTCATTTCACCTTGTTGAGG 59.072 40.000 13.10 0.00 46.03 3.86
2709 2830 6.239289 GGAAATTCATTTCACCTTGTTGAGGA 60.239 38.462 13.10 0.00 46.26 3.71
2710 2831 6.865205 GAAATTCATTTCACCTTGTTGAGGAG 59.135 38.462 7.30 0.00 45.11 3.69
2711 2832 7.470563 GAAATTCATTTCACCTTGTTGAGGAGT 60.471 37.037 7.30 0.00 45.11 3.85
2727 2848 3.985925 GAGGAGTAGTGTTTTGTGTACCG 59.014 47.826 0.00 0.00 0.00 4.02
2729 2850 3.243839 GGAGTAGTGTTTTGTGTACCGGA 60.244 47.826 9.46 0.00 0.00 5.14
2737 2858 4.513692 TGTTTTGTGTACCGGAGATTTCTG 59.486 41.667 9.46 0.00 0.00 3.02
2778 2903 6.150976 TGTCCAGCTTTGTCAAGTTATAATGG 59.849 38.462 0.00 0.00 31.86 3.16
2779 2904 5.652014 TCCAGCTTTGTCAAGTTATAATGGG 59.348 40.000 0.00 0.00 31.86 4.00
2780 2905 5.652014 CCAGCTTTGTCAAGTTATAATGGGA 59.348 40.000 0.00 0.00 31.86 4.37
2799 2924 6.061022 TGGGAACTTCTTGAGCATACAATA 57.939 37.500 0.00 0.00 0.00 1.90
2862 2987 9.442047 ACAATAAAACTTTGTGACCAAAAATCA 57.558 25.926 0.00 0.00 39.95 2.57
2865 2990 9.829507 ATAAAACTTTGTGACCAAAAATCATCA 57.170 25.926 0.00 0.00 39.95 3.07
2922 3049 6.409524 AGAAGCAACCATTTTGATTGAAGA 57.590 33.333 0.00 0.00 0.00 2.87
2925 3052 8.587608 AGAAGCAACCATTTTGATTGAAGAATA 58.412 29.630 0.00 0.00 0.00 1.75
2926 3053 8.767478 AAGCAACCATTTTGATTGAAGAATAG 57.233 30.769 0.00 0.00 0.00 1.73
2928 3055 8.248945 AGCAACCATTTTGATTGAAGAATAGAG 58.751 33.333 0.00 0.00 0.00 2.43
2929 3056 8.031277 GCAACCATTTTGATTGAAGAATAGAGT 58.969 33.333 0.00 0.00 0.00 3.24
2976 3103 5.437191 AAGGATAACAGTACCTCCTTTGG 57.563 43.478 5.70 0.00 43.87 3.28
2985 3114 5.021458 CAGTACCTCCTTTGGAACCTAGTA 58.979 45.833 0.00 0.00 0.00 1.82
2997 3126 8.575649 TTTGGAACCTAGTATTCAATTCCTTC 57.424 34.615 0.00 0.00 37.18 3.46
3037 3166 7.179516 TGTGTTACTTTCCTCATACATGGTAGA 59.820 37.037 0.00 0.00 0.00 2.59
3049 3178 7.861629 TCATACATGGTAGATGAGGTTCTTTT 58.138 34.615 0.00 0.00 0.00 2.27
3051 3180 5.256474 ACATGGTAGATGAGGTTCTTTTGG 58.744 41.667 0.00 0.00 0.00 3.28
3052 3181 3.686016 TGGTAGATGAGGTTCTTTTGGC 58.314 45.455 0.00 0.00 0.00 4.52
3072 3201 2.028020 GCAGTGCTCTGTTTAGTACCCT 60.028 50.000 16.59 0.00 43.05 4.34
3082 3211 7.578955 GCTCTGTTTAGTACCCTGTCTTGATTA 60.579 40.741 0.00 0.00 0.00 1.75
3093 3222 4.816385 CCTGTCTTGATTATTATGCACCGT 59.184 41.667 0.00 0.00 0.00 4.83
3097 3226 7.269316 TGTCTTGATTATTATGCACCGTTCTA 58.731 34.615 0.00 0.00 0.00 2.10
3138 3267 2.206576 AGGATTCCAAGGAACACAGC 57.793 50.000 3.19 0.00 36.91 4.40
3139 3268 1.425066 AGGATTCCAAGGAACACAGCA 59.575 47.619 3.19 0.00 36.91 4.41
3145 3274 0.313043 CAAGGAACACAGCAAGGCAG 59.687 55.000 0.00 0.00 0.00 4.85
3165 3294 3.624861 CAGACATGCATAAGAAGACCCAC 59.375 47.826 0.00 0.00 0.00 4.61
3320 3449 2.631418 TCCGACAAGTGAAGATCGAC 57.369 50.000 0.00 0.00 36.70 4.20
3503 3635 1.668919 CCGCTTACGTTGAGCAGAAGA 60.669 52.381 19.45 0.00 40.13 2.87
3613 3746 2.031919 TGCTTGGGCACACCGTAG 59.968 61.111 0.00 0.00 44.28 3.51
3666 3799 4.681744 TCATTGGTTGAAACACTGCTTTC 58.318 39.130 0.00 0.00 0.00 2.62
3676 3810 5.126222 TGAAACACTGCTTTCAACAATGGTA 59.874 36.000 0.00 0.00 37.24 3.25
3689 3823 0.179084 AATGGTATGGCGGTGTCTCG 60.179 55.000 0.00 0.00 0.00 4.04
3691 3825 2.420568 GGTATGGCGGTGTCTCGGA 61.421 63.158 0.00 0.00 0.00 4.55
3697 3831 2.668280 GCGGTGTCTCGGAAACTGC 61.668 63.158 10.91 10.91 43.63 4.40
3729 3905 4.405116 AAAAGATTTTGCAGCTTGGTCA 57.595 36.364 0.00 0.00 0.00 4.02
3758 3934 3.954999 TGTTTGGTCGATTTTCGGAAAC 58.045 40.909 1.96 5.47 40.88 2.78
3786 3962 3.391296 AGCGACAGGGTATATCCAACAAT 59.609 43.478 4.46 0.00 38.11 2.71
3863 4039 6.769134 AGTGGGGAAATAATTCTAAAACCG 57.231 37.500 0.00 0.00 35.79 4.44
4002 5728 0.802607 GCTAGACTTGGACGGCGAAG 60.803 60.000 16.62 11.96 36.11 3.79
4003 5729 0.179134 CTAGACTTGGACGGCGAAGG 60.179 60.000 17.92 1.34 34.54 3.46
4015 5741 2.892640 CGAAGGAGGCACGGATCA 59.107 61.111 0.00 0.00 0.00 2.92
4021 5747 0.179000 GGAGGCACGGATCACAGAAT 59.821 55.000 0.00 0.00 0.00 2.40
4026 5752 3.126831 GGCACGGATCACAGAATTCTAG 58.873 50.000 7.86 4.20 0.00 2.43
4089 5815 8.190784 ACATAAGAAACAACTTTGTCTTGGAAG 58.809 33.333 0.00 0.00 41.31 3.46
4133 5859 2.491152 CATGGATGGTGTTGCGCC 59.509 61.111 4.18 0.00 34.12 6.53
4152 5878 4.643387 GGCCTTGGTGTGACGCCT 62.643 66.667 17.02 0.00 36.65 5.52
4153 5879 3.050275 GCCTTGGTGTGACGCCTC 61.050 66.667 17.02 0.00 34.70 4.70
4154 5880 2.358737 CCTTGGTGTGACGCCTCC 60.359 66.667 17.02 0.00 34.70 4.30
4155 5881 2.738521 CTTGGTGTGACGCCTCCG 60.739 66.667 17.02 0.80 41.14 4.63
4156 5882 3.220999 CTTGGTGTGACGCCTCCGA 62.221 63.158 17.02 0.00 38.29 4.55
4157 5883 2.507110 CTTGGTGTGACGCCTCCGAT 62.507 60.000 17.02 0.00 38.29 4.18
4158 5884 2.107041 TTGGTGTGACGCCTCCGATT 62.107 55.000 17.02 0.00 38.29 3.34
4159 5885 1.810030 GGTGTGACGCCTCCGATTC 60.810 63.158 8.15 0.00 38.29 2.52
4160 5886 1.080093 GTGTGACGCCTCCGATTCA 60.080 57.895 0.00 0.00 38.29 2.57
4161 5887 0.669318 GTGTGACGCCTCCGATTCAA 60.669 55.000 0.00 0.00 38.29 2.69
4162 5888 0.249120 TGTGACGCCTCCGATTCAAT 59.751 50.000 0.00 0.00 38.29 2.57
4163 5889 0.931005 GTGACGCCTCCGATTCAATC 59.069 55.000 0.00 0.00 38.29 2.67
4181 5907 7.673810 TTCAATCGTACACTAATCATACACG 57.326 36.000 0.00 0.00 0.00 4.49
4182 5908 5.684184 TCAATCGTACACTAATCATACACGC 59.316 40.000 0.00 0.00 0.00 5.34
4183 5909 4.619437 TCGTACACTAATCATACACGCA 57.381 40.909 0.00 0.00 0.00 5.24
4184 5910 4.984205 TCGTACACTAATCATACACGCAA 58.016 39.130 0.00 0.00 0.00 4.85
4185 5911 5.400703 TCGTACACTAATCATACACGCAAA 58.599 37.500 0.00 0.00 0.00 3.68
4186 5912 6.037726 TCGTACACTAATCATACACGCAAAT 58.962 36.000 0.00 0.00 0.00 2.32
4187 5913 6.020201 TCGTACACTAATCATACACGCAAATG 60.020 38.462 0.00 0.00 0.00 2.32
4188 5914 6.237728 CGTACACTAATCATACACGCAAATGT 60.238 38.462 0.00 0.00 36.56 2.71
4189 5915 5.868257 ACACTAATCATACACGCAAATGTG 58.132 37.500 0.00 0.00 45.41 3.21
4198 5924 3.447752 CACGCAAATGTGTACGATCAA 57.552 42.857 0.00 0.00 36.94 2.57
4199 5925 3.407252 CACGCAAATGTGTACGATCAAG 58.593 45.455 0.00 0.00 36.94 3.02
4200 5926 3.122780 CACGCAAATGTGTACGATCAAGA 59.877 43.478 0.00 0.00 36.94 3.02
4201 5927 3.932710 ACGCAAATGTGTACGATCAAGAT 59.067 39.130 0.00 0.00 36.94 2.40
4202 5928 4.032900 ACGCAAATGTGTACGATCAAGATC 59.967 41.667 0.00 0.00 36.94 2.75
4203 5929 4.032786 CGCAAATGTGTACGATCAAGATCA 59.967 41.667 10.39 0.00 37.69 2.92
4204 5930 5.496387 GCAAATGTGTACGATCAAGATCAG 58.504 41.667 10.39 5.82 37.69 2.90
4205 5931 5.503031 GCAAATGTGTACGATCAAGATCAGG 60.503 44.000 10.39 0.00 37.69 3.86
4206 5932 3.801114 TGTGTACGATCAAGATCAGGG 57.199 47.619 10.39 0.00 37.69 4.45
4207 5933 3.361786 TGTGTACGATCAAGATCAGGGA 58.638 45.455 10.39 0.00 37.69 4.20
4208 5934 3.130516 TGTGTACGATCAAGATCAGGGAC 59.869 47.826 10.39 2.84 37.69 4.46
4209 5935 3.381908 GTGTACGATCAAGATCAGGGACT 59.618 47.826 10.39 0.00 43.88 3.85
4210 5936 3.632604 TGTACGATCAAGATCAGGGACTC 59.367 47.826 10.39 0.00 34.60 3.36
4211 5937 2.739943 ACGATCAAGATCAGGGACTCA 58.260 47.619 10.39 0.00 34.60 3.41
4212 5938 2.428890 ACGATCAAGATCAGGGACTCAC 59.571 50.000 10.39 0.00 34.60 3.51
4213 5939 2.542618 CGATCAAGATCAGGGACTCACG 60.543 54.545 10.39 0.00 34.60 4.35
4214 5940 2.215942 TCAAGATCAGGGACTCACGA 57.784 50.000 0.00 0.00 34.60 4.35
4215 5941 2.095461 TCAAGATCAGGGACTCACGAG 58.905 52.381 0.00 0.00 34.60 4.18
4216 5942 2.095461 CAAGATCAGGGACTCACGAGA 58.905 52.381 0.00 0.00 34.60 4.04
4217 5943 2.493675 CAAGATCAGGGACTCACGAGAA 59.506 50.000 0.00 0.00 34.60 2.87
4218 5944 2.374184 AGATCAGGGACTCACGAGAAG 58.626 52.381 0.00 0.00 34.60 2.85
4219 5945 2.025793 AGATCAGGGACTCACGAGAAGA 60.026 50.000 0.00 0.00 34.60 2.87
4220 5946 2.516227 TCAGGGACTCACGAGAAGAT 57.484 50.000 0.00 0.00 34.60 2.40
4221 5947 3.646736 TCAGGGACTCACGAGAAGATA 57.353 47.619 0.00 0.00 34.60 1.98
4222 5948 4.171878 TCAGGGACTCACGAGAAGATAT 57.828 45.455 0.00 0.00 34.60 1.63
4223 5949 4.138290 TCAGGGACTCACGAGAAGATATC 58.862 47.826 0.00 0.00 34.60 1.63
4224 5950 3.885901 CAGGGACTCACGAGAAGATATCA 59.114 47.826 5.32 0.00 34.60 2.15
4225 5951 3.886505 AGGGACTCACGAGAAGATATCAC 59.113 47.826 5.32 0.00 0.00 3.06
4226 5952 3.632604 GGGACTCACGAGAAGATATCACA 59.367 47.826 5.32 0.00 0.00 3.58
4227 5953 4.098044 GGGACTCACGAGAAGATATCACAA 59.902 45.833 5.32 0.00 0.00 3.33
4228 5954 5.038033 GGACTCACGAGAAGATATCACAAC 58.962 45.833 5.32 0.00 0.00 3.32
4229 5955 5.393135 GGACTCACGAGAAGATATCACAACA 60.393 44.000 5.32 0.00 0.00 3.33
4230 5956 5.403246 ACTCACGAGAAGATATCACAACAC 58.597 41.667 5.32 0.00 0.00 3.32
4231 5957 5.048013 ACTCACGAGAAGATATCACAACACA 60.048 40.000 5.32 0.00 0.00 3.72
4232 5958 5.778862 TCACGAGAAGATATCACAACACAA 58.221 37.500 5.32 0.00 0.00 3.33
4233 5959 5.633601 TCACGAGAAGATATCACAACACAAC 59.366 40.000 5.32 0.00 0.00 3.32
4234 5960 5.635280 CACGAGAAGATATCACAACACAACT 59.365 40.000 5.32 0.00 0.00 3.16
4235 5961 5.864474 ACGAGAAGATATCACAACACAACTC 59.136 40.000 5.32 0.00 0.00 3.01
4236 5962 6.096036 CGAGAAGATATCACAACACAACTCT 58.904 40.000 5.32 0.00 0.00 3.24
4237 5963 7.094334 ACGAGAAGATATCACAACACAACTCTA 60.094 37.037 5.32 0.00 0.00 2.43
4238 5964 7.430793 CGAGAAGATATCACAACACAACTCTAG 59.569 40.741 5.32 0.00 0.00 2.43
4239 5965 8.354711 AGAAGATATCACAACACAACTCTAGA 57.645 34.615 5.32 0.00 0.00 2.43
4240 5966 8.247562 AGAAGATATCACAACACAACTCTAGAC 58.752 37.037 5.32 0.00 0.00 2.59
4241 5967 7.468141 AGATATCACAACACAACTCTAGACA 57.532 36.000 5.32 0.00 0.00 3.41
4242 5968 7.316640 AGATATCACAACACAACTCTAGACAC 58.683 38.462 5.32 0.00 0.00 3.67
4243 5969 4.729227 TCACAACACAACTCTAGACACA 57.271 40.909 0.00 0.00 0.00 3.72
4244 5970 5.079689 TCACAACACAACTCTAGACACAA 57.920 39.130 0.00 0.00 0.00 3.33
4245 5971 5.483811 TCACAACACAACTCTAGACACAAA 58.516 37.500 0.00 0.00 0.00 2.83
4246 5972 6.112734 TCACAACACAACTCTAGACACAAAT 58.887 36.000 0.00 0.00 0.00 2.32
4247 5973 7.269316 TCACAACACAACTCTAGACACAAATA 58.731 34.615 0.00 0.00 0.00 1.40
4248 5974 7.766738 TCACAACACAACTCTAGACACAAATAA 59.233 33.333 0.00 0.00 0.00 1.40
4249 5975 8.394877 CACAACACAACTCTAGACACAAATAAA 58.605 33.333 0.00 0.00 0.00 1.40
4250 5976 8.952278 ACAACACAACTCTAGACACAAATAAAA 58.048 29.630 0.00 0.00 0.00 1.52
4251 5977 9.781834 CAACACAACTCTAGACACAAATAAAAA 57.218 29.630 0.00 0.00 0.00 1.94
4276 6002 9.485591 AAAAATACATAAGCTCGAATACAAACG 57.514 29.630 0.00 0.00 0.00 3.60
4277 6003 7.997107 AATACATAAGCTCGAATACAAACGA 57.003 32.000 0.00 0.00 37.03 3.85
4283 6009 3.890705 CTCGAATACAAACGAGTCAGC 57.109 47.619 0.00 0.00 46.90 4.26
4284 6010 2.247637 TCGAATACAAACGAGTCAGCG 58.752 47.619 0.00 0.00 34.49 5.18
4285 6011 1.320555 CGAATACAAACGAGTCAGCGG 59.679 52.381 0.00 0.00 35.12 5.52
4286 6012 2.602878 GAATACAAACGAGTCAGCGGA 58.397 47.619 0.00 0.00 35.12 5.54
4287 6013 2.736144 ATACAAACGAGTCAGCGGAA 57.264 45.000 0.00 0.00 35.12 4.30
4288 6014 2.060326 TACAAACGAGTCAGCGGAAG 57.940 50.000 0.00 0.00 35.12 3.46
4305 6031 5.643339 CGGAAGCAACAATATCTGAGTAC 57.357 43.478 0.00 0.00 0.00 2.73
4306 6032 5.109210 CGGAAGCAACAATATCTGAGTACA 58.891 41.667 0.00 0.00 0.00 2.90
4307 6033 5.755375 CGGAAGCAACAATATCTGAGTACAT 59.245 40.000 0.00 0.00 0.00 2.29
4308 6034 6.923508 CGGAAGCAACAATATCTGAGTACATA 59.076 38.462 0.00 0.00 0.00 2.29
4309 6035 7.096023 CGGAAGCAACAATATCTGAGTACATAC 60.096 40.741 0.00 0.00 0.00 2.39
4310 6036 7.710907 GGAAGCAACAATATCTGAGTACATACA 59.289 37.037 0.00 0.00 0.00 2.29
4311 6037 9.265901 GAAGCAACAATATCTGAGTACATACAT 57.734 33.333 0.00 0.00 0.00 2.29
4312 6038 8.599055 AGCAACAATATCTGAGTACATACATG 57.401 34.615 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.029828 TGCTTCTCCTCTCGTTCTTGAC 60.030 50.000 0.00 0.00 0.00 3.18
7 8 2.239400 TGCTTCTCCTCTCGTTCTTGA 58.761 47.619 0.00 0.00 0.00 3.02
8 9 2.732412 TGCTTCTCCTCTCGTTCTTG 57.268 50.000 0.00 0.00 0.00 3.02
9 10 2.630580 AGTTGCTTCTCCTCTCGTTCTT 59.369 45.455 0.00 0.00 0.00 2.52
10 11 2.029470 CAGTTGCTTCTCCTCTCGTTCT 60.029 50.000 0.00 0.00 0.00 3.01
11 12 2.333014 CAGTTGCTTCTCCTCTCGTTC 58.667 52.381 0.00 0.00 0.00 3.95
12 13 1.001406 CCAGTTGCTTCTCCTCTCGTT 59.999 52.381 0.00 0.00 0.00 3.85
13 14 0.605589 CCAGTTGCTTCTCCTCTCGT 59.394 55.000 0.00 0.00 0.00 4.18
14 15 0.739112 GCCAGTTGCTTCTCCTCTCG 60.739 60.000 0.00 0.00 36.87 4.04
15 16 0.322975 TGCCAGTTGCTTCTCCTCTC 59.677 55.000 0.00 0.00 42.00 3.20
16 17 0.324285 CTGCCAGTTGCTTCTCCTCT 59.676 55.000 0.00 0.00 42.00 3.69
72 73 1.135083 CCGTCTCGCACCTCTAACATT 60.135 52.381 0.00 0.00 0.00 2.71
213 214 0.948141 GCTTTCTCACAGTGCTCGCT 60.948 55.000 0.00 0.00 0.00 4.93
271 273 0.105862 CCCGTATGACCCTCCACCTA 60.106 60.000 0.00 0.00 0.00 3.08
428 430 1.342975 GCTTCTTCTCCTCCTCCTCCT 60.343 57.143 0.00 0.00 0.00 3.69
430 432 0.744281 CGCTTCTTCTCCTCCTCCTC 59.256 60.000 0.00 0.00 0.00 3.71
905 910 4.148825 CAGGGCCGTCGGAAGAGG 62.149 72.222 17.49 0.00 43.49 3.69
950 1028 1.059098 ATGTCAGTGAACAGGGCTCA 58.941 50.000 0.00 0.00 31.50 4.26
981 1059 4.385865 CCCATGTAAAGCCCACTTATGGTA 60.386 45.833 0.00 0.00 45.66 3.25
1054 1132 2.510382 AGGAGACGATAGGACAGGAAGA 59.490 50.000 0.00 0.00 43.77 2.87
1096 1182 1.379977 TCCGGGAGCACGAGAGATT 60.380 57.895 0.00 0.00 35.47 2.40
1160 1246 1.908793 CTGTGGGGGTCTGTCGTCT 60.909 63.158 0.00 0.00 0.00 4.18
1168 1254 3.948719 TTCGTGCCTGTGGGGGTC 61.949 66.667 0.00 0.00 35.12 4.46
1186 1272 5.541868 AGACAGAGAGAGAGAGAGAGATAGG 59.458 48.000 0.00 0.00 0.00 2.57
1187 1273 6.295011 GGAGACAGAGAGAGAGAGAGAGATAG 60.295 50.000 0.00 0.00 0.00 2.08
1188 1274 5.540337 GGAGACAGAGAGAGAGAGAGAGATA 59.460 48.000 0.00 0.00 0.00 1.98
1189 1275 4.346418 GGAGACAGAGAGAGAGAGAGAGAT 59.654 50.000 0.00 0.00 0.00 2.75
1201 1287 0.465460 CGGGAGAGGGAGACAGAGAG 60.465 65.000 0.00 0.00 0.00 3.20
1207 1293 2.124693 CAGAGCGGGAGAGGGAGAC 61.125 68.421 0.00 0.00 0.00 3.36
1306 1392 0.109153 TTCATCGGCTGATCCCATGG 59.891 55.000 4.63 4.14 32.72 3.66
1357 1443 3.972276 GCGGCGAACCTTTTGGCA 61.972 61.111 12.98 0.00 45.59 4.92
1360 1446 1.843734 TAACCGCGGCGAACCTTTTG 61.844 55.000 28.58 6.71 0.00 2.44
1361 1447 1.571215 CTAACCGCGGCGAACCTTTT 61.571 55.000 28.58 12.13 0.00 2.27
1362 1448 2.030862 TAACCGCGGCGAACCTTT 59.969 55.556 28.58 12.96 0.00 3.11
1363 1449 2.433664 CTAACCGCGGCGAACCTT 60.434 61.111 28.58 13.78 0.00 3.50
1371 1469 2.280186 GATCCCAGCTAACCGCGG 60.280 66.667 26.86 26.86 45.59 6.46
1393 1491 4.406069 CACAAATCGACATGGTTAGCTTG 58.594 43.478 0.00 0.00 0.00 4.01
1419 1517 3.751698 GGTCGCCTACAACTTCAGAAAAT 59.248 43.478 0.00 0.00 0.00 1.82
1429 1527 5.413499 TCTAATAAACTGGTCGCCTACAAC 58.587 41.667 0.00 0.00 0.00 3.32
1436 1534 6.967199 CAGGAAATTTCTAATAAACTGGTCGC 59.033 38.462 17.42 0.00 0.00 5.19
1446 1550 9.504708 TCGGTAACAAACAGGAAATTTCTAATA 57.495 29.630 17.42 0.00 0.00 0.98
1447 1551 8.398878 TCGGTAACAAACAGGAAATTTCTAAT 57.601 30.769 17.42 2.13 0.00 1.73
1475 1579 7.768120 AGATCAAGAGGTTAAGCATCTAAAGTG 59.232 37.037 7.52 3.21 37.23 3.16
1479 1583 6.461648 CCGAGATCAAGAGGTTAAGCATCTAA 60.462 42.308 7.52 0.89 37.23 2.10
1522 1626 5.751586 CAGGAAGGCATAAGGGTTAACTAA 58.248 41.667 5.42 0.00 0.00 2.24
1523 1627 4.384868 GCAGGAAGGCATAAGGGTTAACTA 60.385 45.833 5.42 0.00 0.00 2.24
1536 1640 2.043625 CTTGCTTTGCAGGAAGGCA 58.956 52.632 7.41 7.41 44.41 4.75
1561 1665 0.678366 TTGGAACAGCAACACGTGGT 60.678 50.000 21.57 11.47 42.39 4.16
1587 1691 4.156008 ACTCGACCAAAAATGCCTTCATAC 59.844 41.667 0.00 0.00 31.46 2.39
1588 1692 4.155826 CACTCGACCAAAAATGCCTTCATA 59.844 41.667 0.00 0.00 31.46 2.15
1589 1693 3.057315 CACTCGACCAAAAATGCCTTCAT 60.057 43.478 0.00 0.00 33.53 2.57
1591 1695 2.922335 GCACTCGACCAAAAATGCCTTC 60.922 50.000 0.00 0.00 0.00 3.46
1631 1747 5.175856 GTCAGTAGTAGTGCACAAGAAACTG 59.824 44.000 21.04 22.14 34.54 3.16
1695 1811 5.067674 GTGGATGCTGCCTTTGTTCATTATA 59.932 40.000 0.00 0.00 0.00 0.98
1804 1920 0.827368 GCCTCGATCTCTTCCTTGGT 59.173 55.000 0.00 0.00 0.00 3.67
1832 1948 1.860950 CCATCTTATCGTGAACAGCCG 59.139 52.381 0.00 0.00 0.00 5.52
1873 1989 3.526430 AGTAAATTACCACCCTCCTTCCC 59.474 47.826 0.00 0.00 0.00 3.97
1904 2020 8.515414 GTCAGAGTTAAATTAGGCAAAATGACT 58.485 33.333 0.00 0.00 40.22 3.41
1926 2042 6.741992 TGTAATTGGAGCAATACTTGTCAG 57.258 37.500 0.00 0.00 32.43 3.51
1941 2057 8.849168 TGAGCATAATTCAAGGTATGTAATTGG 58.151 33.333 0.00 0.00 31.54 3.16
1943 2059 9.407380 TGTGAGCATAATTCAAGGTATGTAATT 57.593 29.630 0.00 0.00 31.54 1.40
1944 2060 8.978874 TGTGAGCATAATTCAAGGTATGTAAT 57.021 30.769 0.00 0.00 31.54 1.89
1958 2075 9.499479 CCATCTAATTTCTACTGTGAGCATAAT 57.501 33.333 0.00 0.00 0.00 1.28
1969 2087 9.844257 CATCTTTCTTCCCATCTAATTTCTACT 57.156 33.333 0.00 0.00 0.00 2.57
1974 2092 6.745857 ACCCATCTTTCTTCCCATCTAATTT 58.254 36.000 0.00 0.00 0.00 1.82
1975 2093 6.347061 ACCCATCTTTCTTCCCATCTAATT 57.653 37.500 0.00 0.00 0.00 1.40
1976 2094 6.044871 CCTACCCATCTTTCTTCCCATCTAAT 59.955 42.308 0.00 0.00 0.00 1.73
1979 2097 3.718956 CCTACCCATCTTTCTTCCCATCT 59.281 47.826 0.00 0.00 0.00 2.90
1980 2098 3.716872 TCCTACCCATCTTTCTTCCCATC 59.283 47.826 0.00 0.00 0.00 3.51
1982 2100 3.214694 TCCTACCCATCTTTCTTCCCA 57.785 47.619 0.00 0.00 0.00 4.37
1983 2101 5.607171 TCTTATCCTACCCATCTTTCTTCCC 59.393 44.000 0.00 0.00 0.00 3.97
1984 2102 6.555360 TCTCTTATCCTACCCATCTTTCTTCC 59.445 42.308 0.00 0.00 0.00 3.46
1985 2103 7.256154 CCTCTCTTATCCTACCCATCTTTCTTC 60.256 44.444 0.00 0.00 0.00 2.87
1986 2104 6.556874 CCTCTCTTATCCTACCCATCTTTCTT 59.443 42.308 0.00 0.00 0.00 2.52
1989 2107 6.044411 TCCTCTCTTATCCTACCCATCTTT 57.956 41.667 0.00 0.00 0.00 2.52
1990 2108 5.688220 TCCTCTCTTATCCTACCCATCTT 57.312 43.478 0.00 0.00 0.00 2.40
1991 2109 5.103043 TGTTCCTCTCTTATCCTACCCATCT 60.103 44.000 0.00 0.00 0.00 2.90
1992 2110 5.148502 TGTTCCTCTCTTATCCTACCCATC 58.851 45.833 0.00 0.00 0.00 3.51
1993 2111 5.157770 TGTTCCTCTCTTATCCTACCCAT 57.842 43.478 0.00 0.00 0.00 4.00
1994 2112 4.620086 TGTTCCTCTCTTATCCTACCCA 57.380 45.455 0.00 0.00 0.00 4.51
1995 2113 4.715297 TGTTGTTCCTCTCTTATCCTACCC 59.285 45.833 0.00 0.00 0.00 3.69
1996 2114 5.934402 TGTTGTTCCTCTCTTATCCTACC 57.066 43.478 0.00 0.00 0.00 3.18
1997 2115 6.763610 CCATTGTTGTTCCTCTCTTATCCTAC 59.236 42.308 0.00 0.00 0.00 3.18
1999 2117 5.251700 ACCATTGTTGTTCCTCTCTTATCCT 59.748 40.000 0.00 0.00 0.00 3.24
2000 2118 5.501156 ACCATTGTTGTTCCTCTCTTATCC 58.499 41.667 0.00 0.00 0.00 2.59
2001 2119 5.586643 GGACCATTGTTGTTCCTCTCTTATC 59.413 44.000 0.00 0.00 0.00 1.75
2002 2120 5.014123 TGGACCATTGTTGTTCCTCTCTTAT 59.986 40.000 0.00 0.00 0.00 1.73
2003 2121 4.349636 TGGACCATTGTTGTTCCTCTCTTA 59.650 41.667 0.00 0.00 0.00 2.10
2004 2122 3.138283 TGGACCATTGTTGTTCCTCTCTT 59.862 43.478 0.00 0.00 0.00 2.85
2007 2125 3.593442 TTGGACCATTGTTGTTCCTCT 57.407 42.857 0.00 0.00 0.00 3.69
2008 2126 5.253330 TCTATTGGACCATTGTTGTTCCTC 58.747 41.667 0.00 0.00 0.00 3.71
2009 2127 5.222130 ACTCTATTGGACCATTGTTGTTCCT 60.222 40.000 0.00 0.00 0.00 3.36
2010 2128 5.010282 ACTCTATTGGACCATTGTTGTTCC 58.990 41.667 0.00 0.00 0.00 3.62
2011 2129 5.705441 TCACTCTATTGGACCATTGTTGTTC 59.295 40.000 0.00 0.00 0.00 3.18
2012 2130 5.630121 TCACTCTATTGGACCATTGTTGTT 58.370 37.500 0.00 0.00 0.00 2.83
2013 2131 5.241403 TCACTCTATTGGACCATTGTTGT 57.759 39.130 0.00 0.00 0.00 3.32
2014 2132 6.573664 TTTCACTCTATTGGACCATTGTTG 57.426 37.500 0.00 0.00 0.00 3.33
2015 2133 7.781324 ATTTTCACTCTATTGGACCATTGTT 57.219 32.000 0.00 0.00 0.00 2.83
2016 2134 7.451255 TGAATTTTCACTCTATTGGACCATTGT 59.549 33.333 0.00 0.00 31.01 2.71
2017 2135 7.829725 TGAATTTTCACTCTATTGGACCATTG 58.170 34.615 0.00 0.00 31.01 2.82
2042 2160 1.615392 GGCAAAGGAGCACAAAGATGT 59.385 47.619 0.00 0.00 41.61 3.06
2043 2161 1.891150 AGGCAAAGGAGCACAAAGATG 59.109 47.619 0.00 0.00 35.83 2.90
2044 2162 2.299326 AGGCAAAGGAGCACAAAGAT 57.701 45.000 0.00 0.00 35.83 2.40
2045 2163 2.949177 TAGGCAAAGGAGCACAAAGA 57.051 45.000 0.00 0.00 35.83 2.52
2046 2164 2.165030 CCATAGGCAAAGGAGCACAAAG 59.835 50.000 0.00 0.00 35.83 2.77
2047 2165 2.170166 CCATAGGCAAAGGAGCACAAA 58.830 47.619 0.00 0.00 35.83 2.83
2048 2166 1.616725 CCCATAGGCAAAGGAGCACAA 60.617 52.381 0.00 0.00 35.83 3.33
2049 2167 0.034186 CCCATAGGCAAAGGAGCACA 60.034 55.000 0.00 0.00 35.83 4.57
2050 2168 0.753111 CCCCATAGGCAAAGGAGCAC 60.753 60.000 0.00 0.00 35.83 4.40
2051 2169 1.614711 CCCCATAGGCAAAGGAGCA 59.385 57.895 0.00 0.00 35.83 4.26
2052 2170 4.587056 CCCCATAGGCAAAGGAGC 57.413 61.111 0.00 0.00 0.00 4.70
2061 2179 2.034124 CAATTGGACAAGCCCCATAGG 58.966 52.381 0.00 0.00 39.47 2.57
2062 2180 2.954318 CTCAATTGGACAAGCCCCATAG 59.046 50.000 5.42 0.00 34.97 2.23
2063 2181 2.580322 TCTCAATTGGACAAGCCCCATA 59.420 45.455 5.42 0.00 34.97 2.74
2064 2182 1.358787 TCTCAATTGGACAAGCCCCAT 59.641 47.619 5.42 0.00 34.97 4.00
2065 2183 0.776810 TCTCAATTGGACAAGCCCCA 59.223 50.000 5.42 0.00 34.97 4.96
2066 2184 1.272147 ACTCTCAATTGGACAAGCCCC 60.272 52.381 5.42 0.00 34.97 5.80
2067 2185 1.815003 CACTCTCAATTGGACAAGCCC 59.185 52.381 5.42 0.00 34.97 5.19
2068 2186 2.508526 ACACTCTCAATTGGACAAGCC 58.491 47.619 5.42 0.00 37.10 4.35
2069 2187 4.574599 AAACACTCTCAATTGGACAAGC 57.425 40.909 5.42 0.00 0.00 4.01
2070 2188 7.390440 TGGTATAAACACTCTCAATTGGACAAG 59.610 37.037 5.42 0.00 0.00 3.16
2071 2189 7.174253 GTGGTATAAACACTCTCAATTGGACAA 59.826 37.037 5.42 0.00 35.98 3.18
2072 2190 6.653320 GTGGTATAAACACTCTCAATTGGACA 59.347 38.462 5.42 0.00 35.98 4.02
2073 2191 6.879458 AGTGGTATAAACACTCTCAATTGGAC 59.121 38.462 5.42 0.00 45.50 4.02
2074 2192 7.016153 AGTGGTATAAACACTCTCAATTGGA 57.984 36.000 5.42 1.12 45.50 3.53
2085 2203 9.744468 AAAGAACAATTTGAGTGGTATAAACAC 57.256 29.630 2.79 1.55 39.10 3.32
2090 2208 9.567776 TCAGAAAAGAACAATTTGAGTGGTATA 57.432 29.630 2.79 0.00 0.00 1.47
2091 2209 8.463930 TCAGAAAAGAACAATTTGAGTGGTAT 57.536 30.769 2.79 0.00 0.00 2.73
2092 2210 7.873719 TCAGAAAAGAACAATTTGAGTGGTA 57.126 32.000 2.79 0.00 0.00 3.25
2093 2211 6.773976 TCAGAAAAGAACAATTTGAGTGGT 57.226 33.333 2.79 0.00 0.00 4.16
2094 2212 7.455331 GTTCAGAAAAGAACAATTTGAGTGG 57.545 36.000 2.79 0.00 45.53 4.00
2105 2223 4.685165 GGTAGACTCGGTTCAGAAAAGAAC 59.315 45.833 0.00 0.00 45.50 3.01
2106 2224 4.587684 AGGTAGACTCGGTTCAGAAAAGAA 59.412 41.667 0.00 0.00 0.00 2.52
2107 2225 4.150359 AGGTAGACTCGGTTCAGAAAAGA 58.850 43.478 0.00 0.00 0.00 2.52
2108 2226 4.522722 AGGTAGACTCGGTTCAGAAAAG 57.477 45.455 0.00 0.00 0.00 2.27
2109 2227 5.537674 ACTTAGGTAGACTCGGTTCAGAAAA 59.462 40.000 0.00 0.00 0.00 2.29
2110 2228 5.075493 ACTTAGGTAGACTCGGTTCAGAAA 58.925 41.667 0.00 0.00 0.00 2.52
2111 2229 4.660168 ACTTAGGTAGACTCGGTTCAGAA 58.340 43.478 0.00 0.00 0.00 3.02
2112 2230 4.298103 ACTTAGGTAGACTCGGTTCAGA 57.702 45.455 0.00 0.00 0.00 3.27
2113 2231 5.413833 TGTAACTTAGGTAGACTCGGTTCAG 59.586 44.000 0.00 0.00 0.00 3.02
2114 2232 5.316167 TGTAACTTAGGTAGACTCGGTTCA 58.684 41.667 0.00 0.00 0.00 3.18
2115 2233 5.886960 TGTAACTTAGGTAGACTCGGTTC 57.113 43.478 0.00 0.00 0.00 3.62
2116 2234 5.047731 GGTTGTAACTTAGGTAGACTCGGTT 60.048 44.000 0.00 0.00 0.00 4.44
2117 2235 4.460731 GGTTGTAACTTAGGTAGACTCGGT 59.539 45.833 0.00 0.00 0.00 4.69
2118 2236 4.704057 AGGTTGTAACTTAGGTAGACTCGG 59.296 45.833 0.00 0.00 0.00 4.63
2119 2237 5.893897 AGGTTGTAACTTAGGTAGACTCG 57.106 43.478 0.00 0.00 0.00 4.18
2128 2246 5.642491 GGCAAGTCCTAAGGTTGTAACTTAG 59.358 44.000 4.82 4.82 44.36 2.18
2129 2247 5.072058 TGGCAAGTCCTAAGGTTGTAACTTA 59.928 40.000 0.00 0.00 35.26 2.24
2130 2248 4.141344 TGGCAAGTCCTAAGGTTGTAACTT 60.141 41.667 0.00 0.00 35.26 2.66
2131 2249 3.393278 TGGCAAGTCCTAAGGTTGTAACT 59.607 43.478 0.00 0.00 35.26 2.24
2132 2250 3.746940 TGGCAAGTCCTAAGGTTGTAAC 58.253 45.455 0.00 0.00 35.26 2.50
2133 2251 4.650972 ATGGCAAGTCCTAAGGTTGTAA 57.349 40.909 0.00 0.00 35.26 2.41
2134 2252 4.650972 AATGGCAAGTCCTAAGGTTGTA 57.349 40.909 0.00 0.00 35.26 2.41
2135 2253 3.525800 AATGGCAAGTCCTAAGGTTGT 57.474 42.857 0.00 0.00 35.26 3.32
2136 2254 4.559153 CAAAATGGCAAGTCCTAAGGTTG 58.441 43.478 0.00 0.00 35.26 3.77
2137 2255 3.006859 GCAAAATGGCAAGTCCTAAGGTT 59.993 43.478 0.00 0.00 35.26 3.50
2138 2256 2.562738 GCAAAATGGCAAGTCCTAAGGT 59.437 45.455 0.00 0.00 35.26 3.50
2139 2257 2.562298 TGCAAAATGGCAAGTCCTAAGG 59.438 45.455 0.00 0.00 41.65 2.69
2140 2258 3.940209 TGCAAAATGGCAAGTCCTAAG 57.060 42.857 0.00 0.00 41.65 2.18
2149 2267 3.957591 TGCTTCTATTGCAAAATGGCA 57.042 38.095 1.71 8.23 43.19 4.92
2157 2275 4.154737 GCGGATATGATTGCTTCTATTGCA 59.845 41.667 0.00 0.00 38.80 4.08
2158 2276 4.154737 TGCGGATATGATTGCTTCTATTGC 59.845 41.667 0.00 0.00 0.00 3.56
2159 2277 5.868043 TGCGGATATGATTGCTTCTATTG 57.132 39.130 0.00 0.00 0.00 1.90
2160 2278 6.000219 ACTTGCGGATATGATTGCTTCTATT 59.000 36.000 0.00 0.00 0.00 1.73
2161 2279 5.555017 ACTTGCGGATATGATTGCTTCTAT 58.445 37.500 0.00 0.00 0.00 1.98
2162 2280 4.960938 ACTTGCGGATATGATTGCTTCTA 58.039 39.130 0.00 0.00 0.00 2.10
2163 2281 3.813443 ACTTGCGGATATGATTGCTTCT 58.187 40.909 0.00 0.00 0.00 2.85
2164 2282 4.558538 AACTTGCGGATATGATTGCTTC 57.441 40.909 0.00 0.00 0.00 3.86
2165 2283 4.398988 TGAAACTTGCGGATATGATTGCTT 59.601 37.500 0.00 0.00 0.00 3.91
2166 2284 3.947196 TGAAACTTGCGGATATGATTGCT 59.053 39.130 0.00 0.00 0.00 3.91
2167 2285 4.285292 CTGAAACTTGCGGATATGATTGC 58.715 43.478 0.00 0.00 0.00 3.56
2170 2288 3.813443 AGCTGAAACTTGCGGATATGAT 58.187 40.909 0.00 0.00 0.00 2.45
2173 2291 4.458989 TGAAAAGCTGAAACTTGCGGATAT 59.541 37.500 0.00 0.00 0.00 1.63
2179 2297 6.594284 AAGAATTGAAAAGCTGAAACTTGC 57.406 33.333 0.00 0.00 0.00 4.01
2257 2376 2.519013 ACAGAAATTTCCTGTGAGCCC 58.481 47.619 14.61 0.00 42.68 5.19
2265 2384 5.976458 TGAAACAGCAAACAGAAATTTCCT 58.024 33.333 14.61 0.77 0.00 3.36
2270 2389 6.018507 GCAGAAATGAAACAGCAAACAGAAAT 60.019 34.615 0.00 0.00 0.00 2.17
2344 2463 6.126409 AGGTGAAGTGAAAATACCACAGAAA 58.874 36.000 0.00 0.00 37.01 2.52
2353 2472 7.773224 TCTTCTCAACAAGGTGAAGTGAAAATA 59.227 33.333 0.00 0.00 37.67 1.40
2355 2474 5.943416 TCTTCTCAACAAGGTGAAGTGAAAA 59.057 36.000 0.00 0.00 37.67 2.29
2356 2475 5.496556 TCTTCTCAACAAGGTGAAGTGAAA 58.503 37.500 0.00 0.00 37.67 2.69
2357 2476 5.097742 TCTTCTCAACAAGGTGAAGTGAA 57.902 39.130 0.00 0.00 37.67 3.18
2358 2477 4.162320 ACTCTTCTCAACAAGGTGAAGTGA 59.838 41.667 11.56 0.00 37.67 3.41
2359 2478 4.446371 ACTCTTCTCAACAAGGTGAAGTG 58.554 43.478 0.00 0.00 37.67 3.16
2396 2515 3.984633 GTCTCTCAGAAAACAGAACTCCG 59.015 47.826 0.00 0.00 0.00 4.63
2403 2522 5.118990 TGTTTCCAGTCTCTCAGAAAACAG 58.881 41.667 0.00 0.00 30.55 3.16
2407 2526 6.356556 TCAAATGTTTCCAGTCTCTCAGAAA 58.643 36.000 0.00 0.00 0.00 2.52
2422 2541 7.119846 TGGACAAAACGGAAAATTCAAATGTTT 59.880 29.630 0.00 0.00 0.00 2.83
2438 2557 3.566322 TCCATAACACCTTGGACAAAACG 59.434 43.478 0.00 0.00 37.10 3.60
2448 2567 4.263771 CCCAAACTACCTCCATAACACCTT 60.264 45.833 0.00 0.00 0.00 3.50
2466 2585 8.887264 ATAAACCTCAAATACATACACCCAAA 57.113 30.769 0.00 0.00 0.00 3.28
2533 2652 9.505995 AACATTTTTCATGCTTGAATTTTTGTC 57.494 25.926 15.04 0.00 41.38 3.18
2575 2694 7.095017 GGCCTGCTTTGTATATAGCTTTTAGAG 60.095 40.741 0.00 0.00 38.22 2.43
2580 2699 5.053978 AGGCCTGCTTTGTATATAGCTTT 57.946 39.130 3.11 0.00 38.22 3.51
2586 2705 3.951563 TGGAAGGCCTGCTTTGTATAT 57.048 42.857 11.64 0.00 34.31 0.86
2632 2751 7.639378 TCCTTTGCCCTTCTTGTATATACTTT 58.361 34.615 13.89 0.00 0.00 2.66
2641 2760 6.079712 ACTATTATCCTTTGCCCTTCTTGT 57.920 37.500 0.00 0.00 0.00 3.16
2664 2783 5.576563 TCCAAACTTGATTTCAGGAGGTA 57.423 39.130 0.00 0.00 0.00 3.08
2678 2799 7.337938 ACAAGGTGAAATGAATTTCCAAACTT 58.662 30.769 12.11 6.87 44.16 2.66
2692 2813 5.163195 ACACTACTCCTCAACAAGGTGAAAT 60.163 40.000 0.00 0.00 46.32 2.17
2693 2814 4.163458 ACACTACTCCTCAACAAGGTGAAA 59.837 41.667 0.00 0.00 46.32 2.69
2694 2815 3.709653 ACACTACTCCTCAACAAGGTGAA 59.290 43.478 0.00 0.00 46.32 3.18
2695 2816 3.305720 ACACTACTCCTCAACAAGGTGA 58.694 45.455 0.00 0.00 46.32 4.02
2696 2817 3.753294 ACACTACTCCTCAACAAGGTG 57.247 47.619 0.00 0.00 46.32 4.00
2697 2818 4.772886 AAACACTACTCCTCAACAAGGT 57.227 40.909 0.00 0.00 46.32 3.50
2699 2820 5.354234 ACACAAAACACTACTCCTCAACAAG 59.646 40.000 0.00 0.00 0.00 3.16
2700 2821 5.250200 ACACAAAACACTACTCCTCAACAA 58.750 37.500 0.00 0.00 0.00 2.83
2701 2822 4.839121 ACACAAAACACTACTCCTCAACA 58.161 39.130 0.00 0.00 0.00 3.33
2702 2823 5.235831 GGTACACAAAACACTACTCCTCAAC 59.764 44.000 0.00 0.00 0.00 3.18
2703 2824 5.362263 GGTACACAAAACACTACTCCTCAA 58.638 41.667 0.00 0.00 0.00 3.02
2704 2825 4.500205 CGGTACACAAAACACTACTCCTCA 60.500 45.833 0.00 0.00 0.00 3.86
2705 2826 3.985925 CGGTACACAAAACACTACTCCTC 59.014 47.826 0.00 0.00 0.00 3.71
2706 2827 3.243975 CCGGTACACAAAACACTACTCCT 60.244 47.826 0.00 0.00 0.00 3.69
2707 2828 3.062042 CCGGTACACAAAACACTACTCC 58.938 50.000 0.00 0.00 0.00 3.85
2708 2829 3.981211 TCCGGTACACAAAACACTACTC 58.019 45.455 0.00 0.00 0.00 2.59
2709 2830 3.638160 TCTCCGGTACACAAAACACTACT 59.362 43.478 0.00 0.00 0.00 2.57
2710 2831 3.981211 TCTCCGGTACACAAAACACTAC 58.019 45.455 0.00 0.00 0.00 2.73
2711 2832 4.877378 ATCTCCGGTACACAAAACACTA 57.123 40.909 0.00 0.00 0.00 2.74
2712 2833 3.764237 ATCTCCGGTACACAAAACACT 57.236 42.857 0.00 0.00 0.00 3.55
2713 2834 4.514066 AGAAATCTCCGGTACACAAAACAC 59.486 41.667 0.00 0.00 0.00 3.32
2727 2848 5.356470 CCAAATCTTGGTCTCAGAAATCTCC 59.644 44.000 0.00 0.00 45.93 3.71
2754 2878 6.404734 CCCATTATAACTTGACAAAGCTGGAC 60.405 42.308 0.00 0.00 36.84 4.02
2756 2880 5.652014 TCCCATTATAACTTGACAAAGCTGG 59.348 40.000 0.00 0.00 36.84 4.85
2780 2905 9.632638 ACCATAATATTGTATGCTCAAGAAGTT 57.367 29.630 0.00 0.00 31.24 2.66
2821 2946 9.945904 AAGTTTTATTGTTTCAAAGTTTGGGTA 57.054 25.926 15.47 0.00 0.00 3.69
2831 2956 8.833231 TTGGTCACAAAGTTTTATTGTTTCAA 57.167 26.923 0.00 0.00 38.90 2.69
2832 2957 8.833231 TTTGGTCACAAAGTTTTATTGTTTCA 57.167 26.923 0.00 0.00 41.42 2.69
2842 2967 7.330262 ACTGATGATTTTTGGTCACAAAGTTT 58.670 30.769 0.00 0.00 46.37 2.66
2896 3023 7.448161 TCTTCAATCAAAATGGTTGCTTCTAGA 59.552 33.333 0.00 0.00 38.32 2.43
2900 3027 7.662604 ATTCTTCAATCAAAATGGTTGCTTC 57.337 32.000 0.00 0.00 38.32 3.86
2940 3067 8.431910 ACTGTTATCCTTTACTCCTTCTTGTA 57.568 34.615 0.00 0.00 0.00 2.41
2942 3069 7.764901 GGTACTGTTATCCTTTACTCCTTCTTG 59.235 40.741 0.00 0.00 0.00 3.02
2943 3070 7.679025 AGGTACTGTTATCCTTTACTCCTTCTT 59.321 37.037 0.00 0.00 37.18 2.52
2945 3072 7.417683 GGAGGTACTGTTATCCTTTACTCCTTC 60.418 44.444 0.00 0.00 41.55 3.46
2946 3073 6.383436 GGAGGTACTGTTATCCTTTACTCCTT 59.617 42.308 0.00 0.00 41.55 3.36
2947 3074 5.898397 GGAGGTACTGTTATCCTTTACTCCT 59.102 44.000 0.00 0.00 41.55 3.69
2955 3082 4.695606 TCCAAAGGAGGTACTGTTATCCT 58.304 43.478 0.00 3.18 44.12 3.24
2962 3089 3.838903 ACTAGGTTCCAAAGGAGGTACTG 59.161 47.826 0.00 0.00 41.55 2.74
2975 3102 8.753497 AATGAAGGAATTGAATACTAGGTTCC 57.247 34.615 0.00 0.00 36.29 3.62
2976 3103 8.841300 GGAATGAAGGAATTGAATACTAGGTTC 58.159 37.037 0.00 0.00 0.00 3.62
2985 3114 8.605325 AAGAATCAGGAATGAAGGAATTGAAT 57.395 30.769 0.00 0.00 0.00 2.57
2997 3126 7.809806 GGAAAGTAACACAAAGAATCAGGAATG 59.190 37.037 0.00 0.00 0.00 2.67
3037 3166 1.615392 GCACTGCCAAAAGAACCTCAT 59.385 47.619 0.00 0.00 0.00 2.90
3049 3178 2.289444 GGTACTAAACAGAGCACTGCCA 60.289 50.000 11.37 0.00 46.95 4.92
3051 3180 2.028020 AGGGTACTAAACAGAGCACTGC 60.028 50.000 11.37 0.00 46.95 4.40
3072 3201 6.112734 AGAACGGTGCATAATAATCAAGACA 58.887 36.000 0.00 0.00 0.00 3.41
3082 3211 6.238648 GCAGGTAAATTAGAACGGTGCATAAT 60.239 38.462 0.00 0.00 0.00 1.28
3087 3216 2.745281 TGCAGGTAAATTAGAACGGTGC 59.255 45.455 0.00 0.00 0.00 5.01
3145 3274 2.609459 CGTGGGTCTTCTTATGCATGTC 59.391 50.000 10.16 0.00 0.00 3.06
3165 3294 3.571571 TGTACCATGAGTTTCGTTCTCG 58.428 45.455 0.00 0.00 34.99 4.04
3213 3342 0.315251 GGCCTTTGACTTTGCTGACC 59.685 55.000 0.00 0.00 0.00 4.02
3320 3449 1.060553 GACACAATGTACACGATGCGG 59.939 52.381 0.00 0.00 0.00 5.69
3420 3549 6.054295 AGTTTGGCAATGCAAAATACAAAGA 58.946 32.000 11.31 0.00 33.80 2.52
3503 3635 9.665719 TGTACAGTCATGTCACATTTTATACAT 57.334 29.630 0.00 0.00 41.01 2.29
3600 3732 1.823169 GAAGGTCTACGGTGTGCCCA 61.823 60.000 0.00 0.00 0.00 5.36
3601 3733 1.079336 GAAGGTCTACGGTGTGCCC 60.079 63.158 0.00 0.00 0.00 5.36
3613 3746 4.137543 CCATTTATGGCACCTAGAAGGTC 58.862 47.826 0.00 0.00 42.72 3.85
3666 3799 1.132262 GACACCGCCATACCATTGTTG 59.868 52.381 0.00 0.00 0.00 3.33
3676 3810 1.375523 GTTTCCGAGACACCGCCAT 60.376 57.895 0.00 0.00 0.00 4.40
3729 3905 1.981256 ATCGACCAAACAAGCAAGGT 58.019 45.000 0.00 0.00 37.00 3.50
3758 3934 2.349969 TATACCCTGTCGCTGCGCTG 62.350 60.000 18.65 10.04 0.00 5.18
3863 4039 3.019564 CTGGGATGTGGTCCTGAATTTC 58.980 50.000 0.00 0.00 46.91 2.17
3938 4116 6.015688 ACGCTCTTATATTTCATTACGGAGGA 60.016 38.462 0.00 0.00 0.00 3.71
4002 5728 0.179000 ATTCTGTGATCCGTGCCTCC 59.821 55.000 0.00 0.00 0.00 4.30
4003 5729 1.936547 GAATTCTGTGATCCGTGCCTC 59.063 52.381 0.00 0.00 0.00 4.70
4010 5736 4.142609 TGGTGCTAGAATTCTGTGATCC 57.857 45.455 18.47 13.18 0.00 3.36
4015 5741 5.809001 TCTTCAATGGTGCTAGAATTCTGT 58.191 37.500 18.47 0.00 0.00 3.41
4021 5747 4.245660 CTCGTTCTTCAATGGTGCTAGAA 58.754 43.478 0.00 0.00 0.00 2.10
4026 5752 0.169009 GCCTCGTTCTTCAATGGTGC 59.831 55.000 0.00 0.00 0.00 5.01
4078 5804 7.279615 TCTAACAAAGATGACTTCCAAGACAA 58.720 34.615 0.00 0.00 34.62 3.18
4143 5869 0.249120 ATTGAATCGGAGGCGTCACA 59.751 50.000 8.91 0.00 0.00 3.58
4144 5870 0.931005 GATTGAATCGGAGGCGTCAC 59.069 55.000 8.91 0.00 0.00 3.67
4145 5871 3.362581 GATTGAATCGGAGGCGTCA 57.637 52.632 8.91 0.00 0.00 4.35
4155 5881 8.417928 CGTGTATGATTAGTGTACGATTGAATC 58.582 37.037 0.00 0.00 32.36 2.52
4156 5882 7.096189 GCGTGTATGATTAGTGTACGATTGAAT 60.096 37.037 0.00 0.00 32.36 2.57
4157 5883 6.197655 GCGTGTATGATTAGTGTACGATTGAA 59.802 38.462 0.00 0.00 32.36 2.69
4158 5884 5.684184 GCGTGTATGATTAGTGTACGATTGA 59.316 40.000 0.00 0.00 32.36 2.57
4159 5885 5.457473 TGCGTGTATGATTAGTGTACGATTG 59.543 40.000 0.00 0.00 32.36 2.67
4160 5886 5.584442 TGCGTGTATGATTAGTGTACGATT 58.416 37.500 0.00 0.00 32.36 3.34
4161 5887 5.177725 TGCGTGTATGATTAGTGTACGAT 57.822 39.130 0.00 0.00 32.36 3.73
4162 5888 4.619437 TGCGTGTATGATTAGTGTACGA 57.381 40.909 0.00 0.00 32.36 3.43
4163 5889 5.689927 TTTGCGTGTATGATTAGTGTACG 57.310 39.130 0.00 0.00 0.00 3.67
4164 5890 6.899771 CACATTTGCGTGTATGATTAGTGTAC 59.100 38.462 0.00 0.00 32.00 2.90
4165 5891 6.999456 CACATTTGCGTGTATGATTAGTGTA 58.001 36.000 0.00 0.00 32.00 2.90
4166 5892 5.868257 CACATTTGCGTGTATGATTAGTGT 58.132 37.500 0.00 0.00 32.00 3.55
4178 5904 3.122780 TCTTGATCGTACACATTTGCGTG 59.877 43.478 0.00 0.00 42.81 5.34
4179 5905 3.322369 TCTTGATCGTACACATTTGCGT 58.678 40.909 0.00 0.00 0.00 5.24
4180 5906 3.989705 TCTTGATCGTACACATTTGCG 57.010 42.857 0.00 0.00 0.00 4.85
4181 5907 5.469373 TGATCTTGATCGTACACATTTGC 57.531 39.130 6.19 0.00 0.00 3.68
4182 5908 5.007039 CCCTGATCTTGATCGTACACATTTG 59.993 44.000 6.19 0.00 0.00 2.32
4183 5909 5.104941 TCCCTGATCTTGATCGTACACATTT 60.105 40.000 6.19 0.00 0.00 2.32
4184 5910 4.405680 TCCCTGATCTTGATCGTACACATT 59.594 41.667 6.19 0.00 0.00 2.71
4185 5911 3.960755 TCCCTGATCTTGATCGTACACAT 59.039 43.478 6.19 0.00 0.00 3.21
4186 5912 3.130516 GTCCCTGATCTTGATCGTACACA 59.869 47.826 6.19 0.00 0.00 3.72
4187 5913 3.381908 AGTCCCTGATCTTGATCGTACAC 59.618 47.826 6.19 1.73 0.00 2.90
4188 5914 3.632333 AGTCCCTGATCTTGATCGTACA 58.368 45.455 6.19 0.00 0.00 2.90
4189 5915 3.632604 TGAGTCCCTGATCTTGATCGTAC 59.367 47.826 6.19 2.53 0.00 3.67
4190 5916 3.632604 GTGAGTCCCTGATCTTGATCGTA 59.367 47.826 6.19 0.00 0.00 3.43
4191 5917 2.428890 GTGAGTCCCTGATCTTGATCGT 59.571 50.000 6.19 0.00 0.00 3.73
4192 5918 2.542618 CGTGAGTCCCTGATCTTGATCG 60.543 54.545 6.19 2.03 0.00 3.69
4193 5919 2.690497 TCGTGAGTCCCTGATCTTGATC 59.310 50.000 3.82 3.82 0.00 2.92
4194 5920 2.692557 CTCGTGAGTCCCTGATCTTGAT 59.307 50.000 0.00 0.00 0.00 2.57
4195 5921 2.095461 CTCGTGAGTCCCTGATCTTGA 58.905 52.381 0.00 0.00 0.00 3.02
4196 5922 2.095461 TCTCGTGAGTCCCTGATCTTG 58.905 52.381 0.00 0.00 0.00 3.02
4197 5923 2.516227 TCTCGTGAGTCCCTGATCTT 57.484 50.000 0.00 0.00 0.00 2.40
4198 5924 2.025793 TCTTCTCGTGAGTCCCTGATCT 60.026 50.000 0.00 0.00 0.00 2.75
4199 5925 2.370349 TCTTCTCGTGAGTCCCTGATC 58.630 52.381 0.00 0.00 0.00 2.92
4200 5926 2.516227 TCTTCTCGTGAGTCCCTGAT 57.484 50.000 0.00 0.00 0.00 2.90
4201 5927 2.516227 ATCTTCTCGTGAGTCCCTGA 57.484 50.000 0.00 0.00 0.00 3.86
4202 5928 3.885901 TGATATCTTCTCGTGAGTCCCTG 59.114 47.826 3.98 0.00 0.00 4.45
4203 5929 3.886505 GTGATATCTTCTCGTGAGTCCCT 59.113 47.826 3.98 0.00 0.00 4.20
4204 5930 3.632604 TGTGATATCTTCTCGTGAGTCCC 59.367 47.826 3.98 0.00 0.00 4.46
4205 5931 4.902443 TGTGATATCTTCTCGTGAGTCC 57.098 45.455 3.98 0.00 0.00 3.85
4206 5932 5.513495 GTGTTGTGATATCTTCTCGTGAGTC 59.487 44.000 3.98 0.00 0.00 3.36
4207 5933 5.048013 TGTGTTGTGATATCTTCTCGTGAGT 60.048 40.000 3.98 0.00 0.00 3.41
4208 5934 5.402398 TGTGTTGTGATATCTTCTCGTGAG 58.598 41.667 3.98 0.00 0.00 3.51
4209 5935 5.385509 TGTGTTGTGATATCTTCTCGTGA 57.614 39.130 3.98 0.00 0.00 4.35
4210 5936 5.635280 AGTTGTGTTGTGATATCTTCTCGTG 59.365 40.000 3.98 0.00 0.00 4.35
4211 5937 5.784177 AGTTGTGTTGTGATATCTTCTCGT 58.216 37.500 3.98 0.00 0.00 4.18
4212 5938 6.096036 AGAGTTGTGTTGTGATATCTTCTCG 58.904 40.000 3.98 0.00 0.00 4.04
4213 5939 8.462811 TCTAGAGTTGTGTTGTGATATCTTCTC 58.537 37.037 3.98 0.00 0.00 2.87
4214 5940 8.247562 GTCTAGAGTTGTGTTGTGATATCTTCT 58.752 37.037 3.98 0.00 0.00 2.85
4215 5941 8.029522 TGTCTAGAGTTGTGTTGTGATATCTTC 58.970 37.037 3.98 0.00 0.00 2.87
4216 5942 7.815068 GTGTCTAGAGTTGTGTTGTGATATCTT 59.185 37.037 3.98 0.00 0.00 2.40
4217 5943 7.039714 TGTGTCTAGAGTTGTGTTGTGATATCT 60.040 37.037 3.98 0.00 0.00 1.98
4218 5944 7.090808 TGTGTCTAGAGTTGTGTTGTGATATC 58.909 38.462 0.00 0.00 0.00 1.63
4219 5945 6.993079 TGTGTCTAGAGTTGTGTTGTGATAT 58.007 36.000 0.00 0.00 0.00 1.63
4220 5946 6.399639 TGTGTCTAGAGTTGTGTTGTGATA 57.600 37.500 0.00 0.00 0.00 2.15
4221 5947 5.276461 TGTGTCTAGAGTTGTGTTGTGAT 57.724 39.130 0.00 0.00 0.00 3.06
4222 5948 4.729227 TGTGTCTAGAGTTGTGTTGTGA 57.271 40.909 0.00 0.00 0.00 3.58
4223 5949 5.794687 TTTGTGTCTAGAGTTGTGTTGTG 57.205 39.130 0.00 0.00 0.00 3.33
4224 5950 8.500753 TTTATTTGTGTCTAGAGTTGTGTTGT 57.499 30.769 0.00 0.00 0.00 3.32
4225 5951 9.781834 TTTTTATTTGTGTCTAGAGTTGTGTTG 57.218 29.630 0.00 0.00 0.00 3.33
4250 5976 9.485591 CGTTTGTATTCGAGCTTATGTATTTTT 57.514 29.630 0.00 0.00 0.00 1.94
4251 5977 8.875803 TCGTTTGTATTCGAGCTTATGTATTTT 58.124 29.630 0.00 0.00 0.00 1.82
4252 5978 8.415192 TCGTTTGTATTCGAGCTTATGTATTT 57.585 30.769 0.00 0.00 0.00 1.40
4253 5979 7.997107 TCGTTTGTATTCGAGCTTATGTATT 57.003 32.000 0.00 0.00 0.00 1.89
4254 5980 7.624706 CTCGTTTGTATTCGAGCTTATGTAT 57.375 36.000 1.88 0.00 44.82 2.29
4256 5982 5.950965 CTCGTTTGTATTCGAGCTTATGT 57.049 39.130 1.88 0.00 44.82 2.29
4264 5990 2.247637 CGCTGACTCGTTTGTATTCGA 58.752 47.619 0.00 0.00 34.88 3.71
4265 5991 1.320555 CCGCTGACTCGTTTGTATTCG 59.679 52.381 0.00 0.00 0.00 3.34
4266 5992 2.602878 TCCGCTGACTCGTTTGTATTC 58.397 47.619 0.00 0.00 0.00 1.75
4267 5993 2.736144 TCCGCTGACTCGTTTGTATT 57.264 45.000 0.00 0.00 0.00 1.89
4268 5994 2.607187 CTTCCGCTGACTCGTTTGTAT 58.393 47.619 0.00 0.00 0.00 2.29
4269 5995 1.933500 GCTTCCGCTGACTCGTTTGTA 60.934 52.381 0.00 0.00 0.00 2.41
4270 5996 1.222115 GCTTCCGCTGACTCGTTTGT 61.222 55.000 0.00 0.00 0.00 2.83
4271 5997 1.221466 TGCTTCCGCTGACTCGTTTG 61.221 55.000 0.00 0.00 36.97 2.93
4272 5998 0.531974 TTGCTTCCGCTGACTCGTTT 60.532 50.000 0.00 0.00 36.97 3.60
4273 5999 1.069090 TTGCTTCCGCTGACTCGTT 59.931 52.632 0.00 0.00 36.97 3.85
4274 6000 1.664965 GTTGCTTCCGCTGACTCGT 60.665 57.895 0.00 0.00 36.97 4.18
4275 6001 1.221466 TTGTTGCTTCCGCTGACTCG 61.221 55.000 0.00 0.00 36.97 4.18
4276 6002 1.160137 ATTGTTGCTTCCGCTGACTC 58.840 50.000 0.00 0.00 36.97 3.36
4277 6003 2.472695 TATTGTTGCTTCCGCTGACT 57.527 45.000 0.00 0.00 36.97 3.41
4278 6004 2.939103 AGATATTGTTGCTTCCGCTGAC 59.061 45.455 0.00 0.00 36.97 3.51
4279 6005 2.938451 CAGATATTGTTGCTTCCGCTGA 59.062 45.455 0.00 0.00 36.97 4.26
4280 6006 2.938451 TCAGATATTGTTGCTTCCGCTG 59.062 45.455 0.00 0.00 36.97 5.18
4281 6007 3.201290 CTCAGATATTGTTGCTTCCGCT 58.799 45.455 0.00 0.00 36.97 5.52
4282 6008 2.939103 ACTCAGATATTGTTGCTTCCGC 59.061 45.455 0.00 0.00 0.00 5.54
4283 6009 5.109210 TGTACTCAGATATTGTTGCTTCCG 58.891 41.667 0.00 0.00 0.00 4.30
4284 6010 7.710907 TGTATGTACTCAGATATTGTTGCTTCC 59.289 37.037 0.00 0.00 0.00 3.46
4285 6011 8.648557 TGTATGTACTCAGATATTGTTGCTTC 57.351 34.615 0.00 0.00 0.00 3.86
4286 6012 9.049523 CATGTATGTACTCAGATATTGTTGCTT 57.950 33.333 0.00 0.00 0.00 3.91
4287 6013 8.599055 CATGTATGTACTCAGATATTGTTGCT 57.401 34.615 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.