Multiple sequence alignment - TraesCS5B01G190400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G190400 chr5B 100.000 5417 0 0 3705 9121 344315017 344309601 0.000000e+00 10004.0
1 TraesCS5B01G190400 chr5B 100.000 3063 0 0 1 3063 344318721 344315659 0.000000e+00 5657.0
2 TraesCS5B01G190400 chr5B 96.087 1150 32 3 1927 3063 471316044 471314895 0.000000e+00 1862.0
3 TraesCS5B01G190400 chr5B 99.327 743 4 1 6540 7281 443701017 443700275 0.000000e+00 1343.0
4 TraesCS5B01G190400 chr5B 95.946 148 5 1 1 148 612083833 612083979 1.180000e-58 239.0
5 TraesCS5B01G190400 chr5B 87.685 203 19 2 153 349 685323719 685323517 1.980000e-56 231.0
6 TraesCS5B01G190400 chr5B 95.745 141 6 0 1 141 612083148 612083288 2.560000e-55 228.0
7 TraesCS5B01G190400 chr5D 94.805 2618 116 12 3705 6317 301116419 301113817 0.000000e+00 4063.0
8 TraesCS5B01G190400 chr5D 92.247 1019 52 17 7396 8397 301113795 301112787 0.000000e+00 1419.0
9 TraesCS5B01G190400 chr5D 92.626 895 31 11 955 1839 301117297 301116428 0.000000e+00 1254.0
10 TraesCS5B01G190400 chr5D 95.940 739 19 5 8383 9121 301112761 301112034 0.000000e+00 1188.0
11 TraesCS5B01G190400 chr5D 88.073 436 27 9 4131 4547 461346114 461345685 2.290000e-135 494.0
12 TraesCS5B01G190400 chr5D 91.775 231 13 1 1073 1303 461346915 461346691 5.320000e-82 316.0
13 TraesCS5B01G190400 chr5D 89.823 226 16 4 1359 1583 461346620 461346401 5.390000e-72 283.0
14 TraesCS5B01G190400 chr5D 90.099 202 20 0 1638 1839 461345414 461345213 7.020000e-66 263.0
15 TraesCS5B01G190400 chr5D 89.048 210 21 2 142 350 543504391 543504183 9.090000e-65 259.0
16 TraesCS5B01G190400 chr5D 88.119 202 24 0 1638 1839 461346376 461346175 3.290000e-59 241.0
17 TraesCS5B01G190400 chr5A 93.181 2229 97 19 3705 5901 398284502 398282297 0.000000e+00 3223.0
18 TraesCS5B01G190400 chr5A 97.251 1237 22 2 1837 3061 521297490 521298726 0.000000e+00 2085.0
19 TraesCS5B01G190400 chr5A 92.114 1230 76 17 1842 3063 126638869 126637653 0.000000e+00 1714.0
20 TraesCS5B01G190400 chr5A 92.491 1132 63 17 7276 8397 398281639 398280520 0.000000e+00 1600.0
21 TraesCS5B01G190400 chr5A 87.006 1316 99 34 557 1839 398285787 398284511 0.000000e+00 1417.0
22 TraesCS5B01G190400 chr5A 99.592 735 3 0 6540 7274 412523745 412524479 0.000000e+00 1341.0
23 TraesCS5B01G190400 chr5A 96.892 740 15 3 8383 9121 398280494 398279762 0.000000e+00 1232.0
24 TraesCS5B01G190400 chr5A 94.419 663 31 3 5885 6543 398282285 398281625 0.000000e+00 1014.0
25 TraesCS5B01G190400 chr5A 88.403 457 29 9 4110 4547 220912437 220911986 6.270000e-146 529.0
26 TraesCS5B01G190400 chr5A 93.023 215 15 0 142 356 88639432 88639218 1.910000e-81 315.0
27 TraesCS5B01G190400 chr5A 89.340 197 18 3 152 346 639100092 639099897 2.540000e-60 244.0
28 TraesCS5B01G190400 chr5A 87.500 208 24 2 1633 1839 220912666 220912460 1.180000e-58 239.0
29 TraesCS5B01G190400 chr7B 95.524 1251 37 7 1829 3063 746522790 746524037 0.000000e+00 1982.0
30 TraesCS5B01G190400 chr7B 99.592 735 3 0 6540 7274 700429245 700429979 0.000000e+00 1341.0
31 TraesCS5B01G190400 chr1B 95.565 1240 41 4 1837 3063 623949235 623947997 0.000000e+00 1973.0
32 TraesCS5B01G190400 chr1B 99.592 735 3 0 6540 7274 151843680 151842946 0.000000e+00 1341.0
33 TraesCS5B01G190400 chr1B 84.932 511 47 13 1076 1583 638058793 638058310 2.960000e-134 490.0
34 TraesCS5B01G190400 chr1B 89.372 207 22 0 1633 1839 638058292 638058086 2.530000e-65 261.0
35 TraesCS5B01G190400 chr6B 94.835 1239 50 4 1838 3063 459271867 459270630 0.000000e+00 1921.0
36 TraesCS5B01G190400 chr6B 94.508 1220 54 10 1839 3045 120358360 120357141 0.000000e+00 1869.0
37 TraesCS5B01G190400 chr6B 96.481 1080 35 3 1839 2916 703192794 703193872 0.000000e+00 1781.0
38 TraesCS5B01G190400 chr6B 99.456 735 4 0 6540 7274 412159560 412160294 0.000000e+00 1336.0
39 TraesCS5B01G190400 chr2A 92.673 1242 75 9 1835 3063 14405495 14404257 0.000000e+00 1775.0
40 TraesCS5B01G190400 chr4A 93.956 1125 64 4 1837 2957 481067062 481065938 0.000000e+00 1698.0
41 TraesCS5B01G190400 chr3B 92.561 1183 72 9 1832 2999 798314836 798313655 0.000000e+00 1683.0
42 TraesCS5B01G190400 chr3B 99.728 735 2 0 6540 7274 53352105 53351371 0.000000e+00 1347.0
43 TraesCS5B01G190400 chr3B 93.636 440 24 4 4107 4544 582286415 582286852 0.000000e+00 654.0
44 TraesCS5B01G190400 chr3B 89.961 259 15 4 1114 1372 330596716 330596963 3.180000e-84 324.0
45 TraesCS5B01G190400 chr3B 91.304 207 18 0 1633 1839 582286188 582286394 5.390000e-72 283.0
46 TraesCS5B01G190400 chr3B 86.008 243 29 5 138 376 578285322 578285563 1.180000e-63 255.0
47 TraesCS5B01G190400 chr1D 90.419 1242 101 14 1838 3063 361212802 361211563 0.000000e+00 1618.0
48 TraesCS5B01G190400 chr7A 99.456 735 4 0 6540 7274 572573935 572573201 0.000000e+00 1336.0
49 TraesCS5B01G190400 chr6A 99.456 735 4 0 6540 7274 234186772 234186038 0.000000e+00 1336.0
50 TraesCS5B01G190400 chr3A 99.456 735 4 0 6540 7274 231956594 231955860 0.000000e+00 1336.0
51 TraesCS5B01G190400 chr3A 88.672 512 34 8 1073 1583 737829596 737830084 3.640000e-168 603.0
52 TraesCS5B01G190400 chr3A 88.304 513 35 9 1073 1583 737838254 737838743 7.890000e-165 592.0
53 TraesCS5B01G190400 chr3A 88.304 513 35 9 1073 1583 737855092 737855581 7.890000e-165 592.0
54 TraesCS5B01G190400 chr3A 88.106 454 30 9 4110 4544 737830333 737830781 1.360000e-142 518.0
55 TraesCS5B01G190400 chr3A 88.106 454 30 9 4110 4544 737838991 737839439 1.360000e-142 518.0
56 TraesCS5B01G190400 chr3A 87.885 454 31 9 4110 4544 737855829 737856277 6.320000e-141 512.0
57 TraesCS5B01G190400 chr3A 87.019 208 25 2 1633 1839 737830102 737830308 5.510000e-57 233.0
58 TraesCS5B01G190400 chr3A 86.538 208 26 2 1633 1839 737838761 737838967 2.560000e-55 228.0
59 TraesCS5B01G190400 chr3A 96.970 33 1 0 551 583 641863876 641863844 1.000000e-03 56.5
60 TraesCS5B01G190400 chr2B 95.076 853 29 3 2222 3063 133006382 133005532 0.000000e+00 1330.0
61 TraesCS5B01G190400 chr3D 88.323 471 30 8 1073 1542 141475360 141475806 8.060000e-150 542.0
62 TraesCS5B01G190400 chr3D 93.134 335 20 2 4210 4544 141476592 141476923 1.060000e-133 488.0
63 TraesCS5B01G190400 chr3D 88.319 351 17 8 1073 1422 141533435 141533762 5.130000e-107 399.0
64 TraesCS5B01G190400 chr1A 87.560 209 25 1 142 350 278788734 278788941 3.290000e-59 241.0
65 TraesCS5B01G190400 chr7D 87.143 210 25 2 145 353 75808828 75808620 4.260000e-58 237.0
66 TraesCS5B01G190400 chr4B 97.163 141 3 1 1 141 623109817 623109956 4.260000e-58 237.0
67 TraesCS5B01G190400 chr6D 84.951 206 26 5 152 355 273913695 273913897 4.320000e-48 204.0
68 TraesCS5B01G190400 chr6D 93.137 102 5 2 1 101 414240939 414240839 2.050000e-31 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G190400 chr5B 344309601 344318721 9120 True 7830.500000 10004 100.000000 1 9121 2 chr5B.!!$R4 9120
1 TraesCS5B01G190400 chr5B 471314895 471316044 1149 True 1862.000000 1862 96.087000 1927 3063 1 chr5B.!!$R2 1136
2 TraesCS5B01G190400 chr5B 443700275 443701017 742 True 1343.000000 1343 99.327000 6540 7281 1 chr5B.!!$R1 741
3 TraesCS5B01G190400 chr5B 612083148 612083979 831 False 233.500000 239 95.845500 1 148 2 chr5B.!!$F1 147
4 TraesCS5B01G190400 chr5D 301112034 301117297 5263 True 1981.000000 4063 93.904500 955 9121 4 chr5D.!!$R2 8166
5 TraesCS5B01G190400 chr5D 461345213 461346915 1702 True 319.400000 494 89.577800 1073 4547 5 chr5D.!!$R3 3474
6 TraesCS5B01G190400 chr5A 521297490 521298726 1236 False 2085.000000 2085 97.251000 1837 3061 1 chr5A.!!$F2 1224
7 TraesCS5B01G190400 chr5A 126637653 126638869 1216 True 1714.000000 1714 92.114000 1842 3063 1 chr5A.!!$R2 1221
8 TraesCS5B01G190400 chr5A 398279762 398285787 6025 True 1697.200000 3223 92.797800 557 9121 5 chr5A.!!$R5 8564
9 TraesCS5B01G190400 chr5A 412523745 412524479 734 False 1341.000000 1341 99.592000 6540 7274 1 chr5A.!!$F1 734
10 TraesCS5B01G190400 chr5A 220911986 220912666 680 True 384.000000 529 87.951500 1633 4547 2 chr5A.!!$R4 2914
11 TraesCS5B01G190400 chr7B 746522790 746524037 1247 False 1982.000000 1982 95.524000 1829 3063 1 chr7B.!!$F2 1234
12 TraesCS5B01G190400 chr7B 700429245 700429979 734 False 1341.000000 1341 99.592000 6540 7274 1 chr7B.!!$F1 734
13 TraesCS5B01G190400 chr1B 623947997 623949235 1238 True 1973.000000 1973 95.565000 1837 3063 1 chr1B.!!$R2 1226
14 TraesCS5B01G190400 chr1B 151842946 151843680 734 True 1341.000000 1341 99.592000 6540 7274 1 chr1B.!!$R1 734
15 TraesCS5B01G190400 chr1B 638058086 638058793 707 True 375.500000 490 87.152000 1076 1839 2 chr1B.!!$R3 763
16 TraesCS5B01G190400 chr6B 459270630 459271867 1237 True 1921.000000 1921 94.835000 1838 3063 1 chr6B.!!$R2 1225
17 TraesCS5B01G190400 chr6B 120357141 120358360 1219 True 1869.000000 1869 94.508000 1839 3045 1 chr6B.!!$R1 1206
18 TraesCS5B01G190400 chr6B 703192794 703193872 1078 False 1781.000000 1781 96.481000 1839 2916 1 chr6B.!!$F2 1077
19 TraesCS5B01G190400 chr6B 412159560 412160294 734 False 1336.000000 1336 99.456000 6540 7274 1 chr6B.!!$F1 734
20 TraesCS5B01G190400 chr2A 14404257 14405495 1238 True 1775.000000 1775 92.673000 1835 3063 1 chr2A.!!$R1 1228
21 TraesCS5B01G190400 chr4A 481065938 481067062 1124 True 1698.000000 1698 93.956000 1837 2957 1 chr4A.!!$R1 1120
22 TraesCS5B01G190400 chr3B 798313655 798314836 1181 True 1683.000000 1683 92.561000 1832 2999 1 chr3B.!!$R2 1167
23 TraesCS5B01G190400 chr3B 53351371 53352105 734 True 1347.000000 1347 99.728000 6540 7274 1 chr3B.!!$R1 734
24 TraesCS5B01G190400 chr3B 582286188 582286852 664 False 468.500000 654 92.470000 1633 4544 2 chr3B.!!$F3 2911
25 TraesCS5B01G190400 chr1D 361211563 361212802 1239 True 1618.000000 1618 90.419000 1838 3063 1 chr1D.!!$R1 1225
26 TraesCS5B01G190400 chr7A 572573201 572573935 734 True 1336.000000 1336 99.456000 6540 7274 1 chr7A.!!$R1 734
27 TraesCS5B01G190400 chr6A 234186038 234186772 734 True 1336.000000 1336 99.456000 6540 7274 1 chr6A.!!$R1 734
28 TraesCS5B01G190400 chr3A 231955860 231956594 734 True 1336.000000 1336 99.456000 6540 7274 1 chr3A.!!$R1 734
29 TraesCS5B01G190400 chr3A 737855092 737856277 1185 False 552.000000 592 88.094500 1073 4544 2 chr3A.!!$F3 3471
30 TraesCS5B01G190400 chr3A 737829596 737830781 1185 False 451.333333 603 87.932333 1073 4544 3 chr3A.!!$F1 3471
31 TraesCS5B01G190400 chr3A 737838254 737839439 1185 False 446.000000 592 87.649333 1073 4544 3 chr3A.!!$F2 3471
32 TraesCS5B01G190400 chr2B 133005532 133006382 850 True 1330.000000 1330 95.076000 2222 3063 1 chr2B.!!$R1 841
33 TraesCS5B01G190400 chr3D 141475360 141476923 1563 False 515.000000 542 90.728500 1073 4544 2 chr3D.!!$F2 3471

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 264 0.101579 GCTGGAACTCGCTCTACCTC 59.898 60.000 0.00 0.00 0.00 3.85 F
270 271 1.006162 ACTCGCTCTACCTCTTTCCCT 59.994 52.381 0.00 0.00 0.00 4.20 F
852 882 1.160329 ATTCCTTCCGCGTGCATAGC 61.160 55.000 4.92 7.01 0.00 2.97 F
1770 1863 1.340568 GGTAATGTACCCGAGCTCTCC 59.659 57.143 12.85 0.00 43.18 3.71 F
2540 2642 0.392998 CTAGGAACCGCAGCAACCAT 60.393 55.000 0.00 0.00 0.00 3.55 F
3762 3879 1.527034 TCCTGCACATTCAGCTTCAC 58.473 50.000 0.00 0.00 32.87 3.18 F
5367 5553 0.040942 TGGCTGGTATTGGGCACATT 59.959 50.000 0.00 0.00 33.16 2.71 F
5478 5664 1.073923 CCCAGGCTTGTGGTACTTCTT 59.926 52.381 0.00 0.00 35.60 2.52 F
6099 6327 1.227556 GCCCATCATTAGACGCGGT 60.228 57.895 12.47 0.00 0.00 5.68 F
7828 8065 0.471617 CTGGATTCGGGAGCCATCTT 59.528 55.000 0.00 0.00 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1658 1751 0.313043 GCAGCTGTCACAAGCAATGT 59.687 50.000 16.64 0.0 46.08 2.71 R
1770 1863 1.197721 CTAGCAAACCAAGCCACGAAG 59.802 52.381 0.00 0.0 0.00 3.79 R
2540 2642 0.541392 CTGGTCCCCACATCGATTGA 59.459 55.000 0.00 0.0 0.00 2.57 R
3745 3862 0.870393 ACGTGAAGCTGAATGTGCAG 59.130 50.000 0.00 0.0 38.91 4.41 R
3944 4086 1.968017 CATCAACGCAGGCCACAGT 60.968 57.895 5.01 0.0 0.00 3.55 R
5522 5708 0.110056 GAGCACCACAATCTGCGTTG 60.110 55.000 0.00 0.0 38.51 4.10 R
6534 6762 0.099436 GAAACCGCACATCATCCAGC 59.901 55.000 0.00 0.0 0.00 4.85 R
6536 6764 1.271325 ACTGAAACCGCACATCATCCA 60.271 47.619 0.00 0.0 0.00 3.41 R
7974 8211 1.138069 TCCGCAGACTGAACTGAAACA 59.862 47.619 6.65 0.0 39.94 2.83 R
8984 9272 1.042229 AGTGGCTGAAAATGCTGCAA 58.958 45.000 6.36 0.0 34.81 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 2.760092 CCCAAGTGGTGAAATATGGTGG 59.240 50.000 0.00 0.00 0.00 4.61
112 113 4.927267 AGTGGTGAAATATGGTGGAGAA 57.073 40.909 0.00 0.00 0.00 2.87
116 117 4.881273 TGGTGAAATATGGTGGAGAAATCG 59.119 41.667 0.00 0.00 0.00 3.34
121 122 0.546598 ATGGTGGAGAAATCGTCCCC 59.453 55.000 0.00 0.00 32.49 4.81
122 123 0.546747 TGGTGGAGAAATCGTCCCCT 60.547 55.000 0.00 0.00 32.49 4.79
124 125 0.744771 GTGGAGAAATCGTCCCCTGC 60.745 60.000 0.00 0.00 32.49 4.85
141 142 2.107204 CCTGCAATAGAGGCTTGGGTAT 59.893 50.000 0.00 0.00 0.00 2.73
142 143 3.435601 CCTGCAATAGAGGCTTGGGTATT 60.436 47.826 0.00 0.00 0.00 1.89
144 145 3.459598 TGCAATAGAGGCTTGGGTATTCT 59.540 43.478 0.00 0.00 0.00 2.40
146 147 4.444876 GCAATAGAGGCTTGGGTATTCTGA 60.445 45.833 0.00 0.00 0.00 3.27
147 148 5.303971 CAATAGAGGCTTGGGTATTCTGAG 58.696 45.833 0.00 0.00 0.00 3.35
148 149 3.121929 AGAGGCTTGGGTATTCTGAGA 57.878 47.619 0.00 0.00 0.00 3.27
149 150 3.454858 AGAGGCTTGGGTATTCTGAGAA 58.545 45.455 0.00 0.00 0.00 2.87
151 152 4.476479 AGAGGCTTGGGTATTCTGAGAAAT 59.524 41.667 0.00 0.00 0.00 2.17
152 153 4.530875 AGGCTTGGGTATTCTGAGAAATG 58.469 43.478 0.00 0.00 0.00 2.32
153 154 4.018050 AGGCTTGGGTATTCTGAGAAATGT 60.018 41.667 0.00 0.00 0.00 2.71
154 155 5.191722 AGGCTTGGGTATTCTGAGAAATGTA 59.808 40.000 0.00 0.00 0.00 2.29
155 156 5.885912 GGCTTGGGTATTCTGAGAAATGTAA 59.114 40.000 0.00 0.00 0.00 2.41
156 157 6.547510 GGCTTGGGTATTCTGAGAAATGTAAT 59.452 38.462 0.00 0.00 0.00 1.89
157 158 7.719633 GGCTTGGGTATTCTGAGAAATGTAATA 59.280 37.037 0.00 0.00 0.00 0.98
158 159 8.778358 GCTTGGGTATTCTGAGAAATGTAATAG 58.222 37.037 0.00 0.00 0.00 1.73
160 161 7.224297 TGGGTATTCTGAGAAATGTAATAGGC 58.776 38.462 0.00 0.00 0.00 3.93
161 162 7.072454 TGGGTATTCTGAGAAATGTAATAGGCT 59.928 37.037 0.00 0.00 0.00 4.58
162 163 8.594550 GGGTATTCTGAGAAATGTAATAGGCTA 58.405 37.037 0.00 0.00 0.00 3.93
163 164 9.646427 GGTATTCTGAGAAATGTAATAGGCTAG 57.354 37.037 0.00 0.00 0.00 3.42
166 167 7.291411 TCTGAGAAATGTAATAGGCTAGACC 57.709 40.000 0.00 0.00 39.61 3.85
181 182 6.347859 GGCTAGACCTTATTATGTGCTACT 57.652 41.667 0.00 0.00 34.51 2.57
183 184 6.015350 GGCTAGACCTTATTATGTGCTACTCA 60.015 42.308 0.00 0.00 34.51 3.41
184 185 7.087639 GCTAGACCTTATTATGTGCTACTCAG 58.912 42.308 0.00 0.00 0.00 3.35
185 186 6.412362 AGACCTTATTATGTGCTACTCAGG 57.588 41.667 0.00 0.00 0.00 3.86
186 187 5.900123 AGACCTTATTATGTGCTACTCAGGT 59.100 40.000 0.00 0.00 0.00 4.00
187 188 6.384305 AGACCTTATTATGTGCTACTCAGGTT 59.616 38.462 0.00 0.00 0.00 3.50
188 189 6.958767 ACCTTATTATGTGCTACTCAGGTTT 58.041 36.000 0.00 0.00 0.00 3.27
189 190 7.402862 ACCTTATTATGTGCTACTCAGGTTTT 58.597 34.615 0.00 0.00 0.00 2.43
190 191 7.553044 ACCTTATTATGTGCTACTCAGGTTTTC 59.447 37.037 0.00 0.00 0.00 2.29
191 192 7.254455 CCTTATTATGTGCTACTCAGGTTTTCG 60.254 40.741 0.00 0.00 0.00 3.46
192 193 2.902705 TGTGCTACTCAGGTTTTCGT 57.097 45.000 0.00 0.00 0.00 3.85
193 194 2.750948 TGTGCTACTCAGGTTTTCGTC 58.249 47.619 0.00 0.00 0.00 4.20
194 195 2.067013 GTGCTACTCAGGTTTTCGTCC 58.933 52.381 0.00 0.00 0.00 4.79
197 198 2.354805 GCTACTCAGGTTTTCGTCCCAT 60.355 50.000 0.00 0.00 0.00 4.00
198 199 3.118884 GCTACTCAGGTTTTCGTCCCATA 60.119 47.826 0.00 0.00 0.00 2.74
199 200 3.611766 ACTCAGGTTTTCGTCCCATAG 57.388 47.619 0.00 0.00 0.00 2.23
200 201 2.280628 CTCAGGTTTTCGTCCCATAGC 58.719 52.381 0.00 0.00 0.00 2.97
201 202 1.626321 TCAGGTTTTCGTCCCATAGCA 59.374 47.619 0.00 0.00 0.00 3.49
203 204 1.092348 GGTTTTCGTCCCATAGCACC 58.908 55.000 0.00 0.00 0.00 5.01
205 206 0.391927 TTTTCGTCCCATAGCACCCG 60.392 55.000 0.00 0.00 0.00 5.28
206 207 1.546589 TTTCGTCCCATAGCACCCGT 61.547 55.000 0.00 0.00 0.00 5.28
207 208 1.546589 TTCGTCCCATAGCACCCGTT 61.547 55.000 0.00 0.00 0.00 4.44
209 210 1.087771 CGTCCCATAGCACCCGTTTC 61.088 60.000 0.00 0.00 0.00 2.78
210 211 1.087771 GTCCCATAGCACCCGTTTCG 61.088 60.000 0.00 0.00 0.00 3.46
212 213 0.179056 CCCATAGCACCCGTTTCGAT 60.179 55.000 0.00 0.00 0.00 3.59
213 214 0.937304 CCATAGCACCCGTTTCGATG 59.063 55.000 0.00 0.00 0.00 3.84
214 215 0.937304 CATAGCACCCGTTTCGATGG 59.063 55.000 0.00 0.00 0.00 3.51
215 216 0.814010 ATAGCACCCGTTTCGATGGC 60.814 55.000 0.00 0.00 0.00 4.40
216 217 4.160635 GCACCCGTTTCGATGGCG 62.161 66.667 0.00 0.00 39.35 5.69
227 228 4.451150 GATGGCGAGCGGGTGTGA 62.451 66.667 0.00 0.00 0.00 3.58
228 229 3.740128 GATGGCGAGCGGGTGTGAT 62.740 63.158 0.00 0.00 0.00 3.06
229 230 4.758251 TGGCGAGCGGGTGTGATG 62.758 66.667 0.00 0.00 0.00 3.07
232 233 4.082523 CGAGCGGGTGTGATGGGT 62.083 66.667 0.00 0.00 0.00 4.51
233 234 2.351276 GAGCGGGTGTGATGGGTT 59.649 61.111 0.00 0.00 0.00 4.11
234 235 1.303317 GAGCGGGTGTGATGGGTTT 60.303 57.895 0.00 0.00 0.00 3.27
235 236 0.893727 GAGCGGGTGTGATGGGTTTT 60.894 55.000 0.00 0.00 0.00 2.43
236 237 0.893727 AGCGGGTGTGATGGGTTTTC 60.894 55.000 0.00 0.00 0.00 2.29
237 238 0.893727 GCGGGTGTGATGGGTTTTCT 60.894 55.000 0.00 0.00 0.00 2.52
238 239 0.881118 CGGGTGTGATGGGTTTTCTG 59.119 55.000 0.00 0.00 0.00 3.02
239 240 1.256812 GGGTGTGATGGGTTTTCTGG 58.743 55.000 0.00 0.00 0.00 3.86
240 241 1.480498 GGGTGTGATGGGTTTTCTGGT 60.480 52.381 0.00 0.00 0.00 4.00
241 242 2.224917 GGGTGTGATGGGTTTTCTGGTA 60.225 50.000 0.00 0.00 0.00 3.25
242 243 3.081804 GGTGTGATGGGTTTTCTGGTAG 58.918 50.000 0.00 0.00 0.00 3.18
243 244 3.497942 GGTGTGATGGGTTTTCTGGTAGT 60.498 47.826 0.00 0.00 0.00 2.73
244 245 3.502211 GTGTGATGGGTTTTCTGGTAGTG 59.498 47.826 0.00 0.00 0.00 2.74
245 246 2.488153 GTGATGGGTTTTCTGGTAGTGC 59.512 50.000 0.00 0.00 0.00 4.40
246 247 2.375174 TGATGGGTTTTCTGGTAGTGCT 59.625 45.455 0.00 0.00 0.00 4.40
247 248 2.270352 TGGGTTTTCTGGTAGTGCTG 57.730 50.000 0.00 0.00 0.00 4.41
248 249 1.202879 TGGGTTTTCTGGTAGTGCTGG 60.203 52.381 0.00 0.00 0.00 4.85
249 250 1.073284 GGGTTTTCTGGTAGTGCTGGA 59.927 52.381 0.00 0.00 0.00 3.86
250 251 2.488347 GGGTTTTCTGGTAGTGCTGGAA 60.488 50.000 0.00 0.00 0.00 3.53
251 252 2.552743 GGTTTTCTGGTAGTGCTGGAAC 59.447 50.000 0.00 0.00 0.00 3.62
252 253 3.477530 GTTTTCTGGTAGTGCTGGAACT 58.522 45.455 0.00 0.00 0.00 3.01
253 254 3.402628 TTTCTGGTAGTGCTGGAACTC 57.597 47.619 0.00 0.00 0.00 3.01
254 255 0.888619 TCTGGTAGTGCTGGAACTCG 59.111 55.000 0.00 0.00 0.00 4.18
255 256 0.737715 CTGGTAGTGCTGGAACTCGC 60.738 60.000 0.00 0.00 0.00 5.03
256 257 1.185618 TGGTAGTGCTGGAACTCGCT 61.186 55.000 0.00 0.00 0.00 4.93
257 258 0.458716 GGTAGTGCTGGAACTCGCTC 60.459 60.000 0.00 0.00 0.00 5.03
258 259 0.528470 GTAGTGCTGGAACTCGCTCT 59.472 55.000 0.00 0.00 34.71 4.09
259 260 1.743958 GTAGTGCTGGAACTCGCTCTA 59.256 52.381 0.00 0.00 32.83 2.43
260 261 0.528470 AGTGCTGGAACTCGCTCTAC 59.472 55.000 0.00 0.00 0.00 2.59
261 262 0.458716 GTGCTGGAACTCGCTCTACC 60.459 60.000 0.00 0.00 0.00 3.18
262 263 0.612174 TGCTGGAACTCGCTCTACCT 60.612 55.000 0.00 0.00 0.00 3.08
263 264 0.101579 GCTGGAACTCGCTCTACCTC 59.898 60.000 0.00 0.00 0.00 3.85
264 265 1.757682 CTGGAACTCGCTCTACCTCT 58.242 55.000 0.00 0.00 0.00 3.69
265 266 2.096248 CTGGAACTCGCTCTACCTCTT 58.904 52.381 0.00 0.00 0.00 2.85
266 267 2.494073 CTGGAACTCGCTCTACCTCTTT 59.506 50.000 0.00 0.00 0.00 2.52
267 268 2.492484 TGGAACTCGCTCTACCTCTTTC 59.508 50.000 0.00 0.00 0.00 2.62
268 269 2.159212 GGAACTCGCTCTACCTCTTTCC 60.159 54.545 0.00 0.00 0.00 3.13
269 270 1.476477 ACTCGCTCTACCTCTTTCCC 58.524 55.000 0.00 0.00 0.00 3.97
270 271 1.006162 ACTCGCTCTACCTCTTTCCCT 59.994 52.381 0.00 0.00 0.00 4.20
271 272 2.104170 CTCGCTCTACCTCTTTCCCTT 58.896 52.381 0.00 0.00 0.00 3.95
272 273 2.100087 CTCGCTCTACCTCTTTCCCTTC 59.900 54.545 0.00 0.00 0.00 3.46
273 274 2.104170 CGCTCTACCTCTTTCCCTTCT 58.896 52.381 0.00 0.00 0.00 2.85
274 275 2.100087 CGCTCTACCTCTTTCCCTTCTC 59.900 54.545 0.00 0.00 0.00 2.87
275 276 3.100671 GCTCTACCTCTTTCCCTTCTCA 58.899 50.000 0.00 0.00 0.00 3.27
276 277 3.118920 GCTCTACCTCTTTCCCTTCTCAC 60.119 52.174 0.00 0.00 0.00 3.51
277 278 3.090037 TCTACCTCTTTCCCTTCTCACG 58.910 50.000 0.00 0.00 0.00 4.35
278 279 2.011122 ACCTCTTTCCCTTCTCACGA 57.989 50.000 0.00 0.00 0.00 4.35
279 280 1.619332 ACCTCTTTCCCTTCTCACGAC 59.381 52.381 0.00 0.00 0.00 4.34
280 281 1.896465 CCTCTTTCCCTTCTCACGACT 59.104 52.381 0.00 0.00 0.00 4.18
281 282 2.094442 CCTCTTTCCCTTCTCACGACTC 60.094 54.545 0.00 0.00 0.00 3.36
282 283 2.823154 CTCTTTCCCTTCTCACGACTCT 59.177 50.000 0.00 0.00 0.00 3.24
283 284 3.231818 TCTTTCCCTTCTCACGACTCTT 58.768 45.455 0.00 0.00 0.00 2.85
284 285 3.256136 TCTTTCCCTTCTCACGACTCTTC 59.744 47.826 0.00 0.00 0.00 2.87
285 286 2.588464 TCCCTTCTCACGACTCTTCT 57.412 50.000 0.00 0.00 0.00 2.85
286 287 2.163509 TCCCTTCTCACGACTCTTCTG 58.836 52.381 0.00 0.00 0.00 3.02
287 288 1.889829 CCCTTCTCACGACTCTTCTGT 59.110 52.381 0.00 0.00 0.00 3.41
288 289 2.297597 CCCTTCTCACGACTCTTCTGTT 59.702 50.000 0.00 0.00 0.00 3.16
289 290 3.506455 CCCTTCTCACGACTCTTCTGTTA 59.494 47.826 0.00 0.00 0.00 2.41
290 291 4.380023 CCCTTCTCACGACTCTTCTGTTAG 60.380 50.000 0.00 0.00 0.00 2.34
291 292 4.456222 CCTTCTCACGACTCTTCTGTTAGA 59.544 45.833 0.00 0.00 0.00 2.10
292 293 5.048643 CCTTCTCACGACTCTTCTGTTAGAA 60.049 44.000 0.00 0.00 32.50 2.10
293 294 5.359716 TCTCACGACTCTTCTGTTAGAAC 57.640 43.478 0.00 0.00 29.89 3.01
294 295 5.064558 TCTCACGACTCTTCTGTTAGAACT 58.935 41.667 0.00 0.00 29.89 3.01
295 296 5.049336 TCTCACGACTCTTCTGTTAGAACTG 60.049 44.000 0.00 0.00 29.89 3.16
296 297 4.023107 TCACGACTCTTCTGTTAGAACTGG 60.023 45.833 0.00 0.00 29.89 4.00
297 298 3.890147 ACGACTCTTCTGTTAGAACTGGT 59.110 43.478 0.00 0.00 29.89 4.00
298 299 4.341520 ACGACTCTTCTGTTAGAACTGGTT 59.658 41.667 0.00 0.00 29.89 3.67
299 300 4.681942 CGACTCTTCTGTTAGAACTGGTTG 59.318 45.833 0.00 0.00 29.89 3.77
300 301 5.602628 GACTCTTCTGTTAGAACTGGTTGT 58.397 41.667 0.00 0.00 29.89 3.32
301 302 6.514541 CGACTCTTCTGTTAGAACTGGTTGTA 60.515 42.308 0.00 0.00 29.89 2.41
302 303 7.304497 ACTCTTCTGTTAGAACTGGTTGTAT 57.696 36.000 0.00 0.00 29.89 2.29
303 304 7.736893 ACTCTTCTGTTAGAACTGGTTGTATT 58.263 34.615 0.00 0.00 29.89 1.89
304 305 8.211629 ACTCTTCTGTTAGAACTGGTTGTATTT 58.788 33.333 0.00 0.00 29.89 1.40
305 306 8.603242 TCTTCTGTTAGAACTGGTTGTATTTC 57.397 34.615 0.00 0.00 29.89 2.17
306 307 8.429641 TCTTCTGTTAGAACTGGTTGTATTTCT 58.570 33.333 0.00 0.00 29.89 2.52
307 308 7.962964 TCTGTTAGAACTGGTTGTATTTCTG 57.037 36.000 0.00 0.00 30.89 3.02
308 309 7.506114 TCTGTTAGAACTGGTTGTATTTCTGT 58.494 34.615 0.00 0.00 30.89 3.41
309 310 7.990886 TCTGTTAGAACTGGTTGTATTTCTGTT 59.009 33.333 0.00 0.00 30.89 3.16
310 311 8.149973 TGTTAGAACTGGTTGTATTTCTGTTC 57.850 34.615 0.00 0.00 38.65 3.18
311 312 7.990886 TGTTAGAACTGGTTGTATTTCTGTTCT 59.009 33.333 15.32 15.32 45.16 3.01
312 313 8.837389 GTTAGAACTGGTTGTATTTCTGTTCTT 58.163 33.333 15.90 5.46 42.69 2.52
313 314 7.881775 AGAACTGGTTGTATTTCTGTTCTTT 57.118 32.000 0.00 0.00 42.69 2.52
314 315 8.974060 AGAACTGGTTGTATTTCTGTTCTTTA 57.026 30.769 0.00 0.00 42.69 1.85
315 316 8.837389 AGAACTGGTTGTATTTCTGTTCTTTAC 58.163 33.333 0.00 0.00 42.69 2.01
316 317 8.514330 AACTGGTTGTATTTCTGTTCTTTACA 57.486 30.769 0.00 0.00 34.95 2.41
317 318 8.514330 ACTGGTTGTATTTCTGTTCTTTACAA 57.486 30.769 0.00 0.00 36.02 2.41
318 319 9.131791 ACTGGTTGTATTTCTGTTCTTTACAAT 57.868 29.630 0.00 0.00 35.80 2.71
319 320 9.398170 CTGGTTGTATTTCTGTTCTTTACAATG 57.602 33.333 0.00 0.00 35.80 2.82
320 321 9.126151 TGGTTGTATTTCTGTTCTTTACAATGA 57.874 29.630 0.00 0.00 35.80 2.57
321 322 9.959749 GGTTGTATTTCTGTTCTTTACAATGAA 57.040 29.630 0.00 0.00 35.80 2.57
327 328 8.940768 TTTCTGTTCTTTACAATGAAAAAGGG 57.059 30.769 10.96 3.39 36.02 3.95
328 329 7.654022 TCTGTTCTTTACAATGAAAAAGGGT 57.346 32.000 10.96 0.00 36.02 4.34
329 330 8.754991 TCTGTTCTTTACAATGAAAAAGGGTA 57.245 30.769 10.96 0.00 36.02 3.69
330 331 9.191479 TCTGTTCTTTACAATGAAAAAGGGTAA 57.809 29.630 10.96 0.00 36.02 2.85
331 332 9.810545 CTGTTCTTTACAATGAAAAAGGGTAAA 57.189 29.630 10.96 0.00 36.02 2.01
332 333 9.810545 TGTTCTTTACAATGAAAAAGGGTAAAG 57.189 29.630 13.55 13.55 46.06 1.85
333 334 8.761497 GTTCTTTACAATGAAAAAGGGTAAAGC 58.239 33.333 14.48 2.66 45.11 3.51
334 335 7.438564 TCTTTACAATGAAAAAGGGTAAAGCC 58.561 34.615 14.48 0.00 45.11 4.35
374 375 8.803397 AGAAATACTAACTCCCAAATTGTACC 57.197 34.615 0.00 0.00 0.00 3.34
375 376 8.387813 AGAAATACTAACTCCCAAATTGTACCA 58.612 33.333 0.00 0.00 0.00 3.25
376 377 9.185680 GAAATACTAACTCCCAAATTGTACCAT 57.814 33.333 0.00 0.00 0.00 3.55
377 378 8.747538 AATACTAACTCCCAAATTGTACCATC 57.252 34.615 0.00 0.00 0.00 3.51
378 379 6.134535 ACTAACTCCCAAATTGTACCATCA 57.865 37.500 0.00 0.00 0.00 3.07
379 380 6.548321 ACTAACTCCCAAATTGTACCATCAA 58.452 36.000 0.00 0.00 0.00 2.57
380 381 5.722021 AACTCCCAAATTGTACCATCAAC 57.278 39.130 0.00 0.00 0.00 3.18
381 382 4.735369 ACTCCCAAATTGTACCATCAACA 58.265 39.130 0.00 0.00 0.00 3.33
382 383 4.522789 ACTCCCAAATTGTACCATCAACAC 59.477 41.667 0.00 0.00 0.00 3.32
383 384 4.735369 TCCCAAATTGTACCATCAACACT 58.265 39.130 0.00 0.00 0.00 3.55
384 385 5.144100 TCCCAAATTGTACCATCAACACTT 58.856 37.500 0.00 0.00 0.00 3.16
385 386 5.600484 TCCCAAATTGTACCATCAACACTTT 59.400 36.000 0.00 0.00 32.04 2.66
386 387 5.695816 CCCAAATTGTACCATCAACACTTTG 59.304 40.000 10.37 10.37 42.50 2.77
387 388 6.768029 CAAATTGTACCATCAACACTTTGG 57.232 37.500 9.76 0.00 40.75 3.28
388 389 6.511416 CAAATTGTACCATCAACACTTTGGA 58.489 36.000 9.76 0.00 40.75 3.53
389 390 6.723298 AATTGTACCATCAACACTTTGGAA 57.277 33.333 0.00 0.00 34.52 3.53
390 391 6.723298 ATTGTACCATCAACACTTTGGAAA 57.277 33.333 0.00 0.00 34.52 3.13
391 392 6.531503 TTGTACCATCAACACTTTGGAAAA 57.468 33.333 0.00 0.00 34.52 2.29
392 393 6.531503 TGTACCATCAACACTTTGGAAAAA 57.468 33.333 0.00 0.00 34.52 1.94
412 413 6.949352 AAAAAGCACGAATGGATGAGATAT 57.051 33.333 0.00 0.00 0.00 1.63
413 414 6.551385 AAAAGCACGAATGGATGAGATATC 57.449 37.500 0.00 0.00 0.00 1.63
414 415 4.879197 AGCACGAATGGATGAGATATCA 57.121 40.909 5.32 0.00 0.00 2.15
415 416 5.417754 AGCACGAATGGATGAGATATCAT 57.582 39.130 1.59 1.59 0.00 2.45
416 417 5.176592 AGCACGAATGGATGAGATATCATG 58.823 41.667 7.74 0.00 0.00 3.07
417 418 4.934001 GCACGAATGGATGAGATATCATGT 59.066 41.667 7.74 0.00 0.00 3.21
418 419 6.071165 AGCACGAATGGATGAGATATCATGTA 60.071 38.462 7.74 0.00 0.00 2.29
419 420 6.035435 GCACGAATGGATGAGATATCATGTAC 59.965 42.308 7.74 0.00 0.00 2.90
420 421 7.318893 CACGAATGGATGAGATATCATGTACT 58.681 38.462 7.74 0.00 0.00 2.73
421 422 7.487509 CACGAATGGATGAGATATCATGTACTC 59.512 40.741 7.74 0.00 0.00 2.59
422 423 6.977502 CGAATGGATGAGATATCATGTACTCC 59.022 42.308 7.74 3.74 0.00 3.85
423 424 7.147932 CGAATGGATGAGATATCATGTACTCCT 60.148 40.741 7.74 0.00 0.00 3.69
424 425 8.446714 AATGGATGAGATATCATGTACTCCTT 57.553 34.615 7.74 0.00 0.00 3.36
425 426 7.473735 TGGATGAGATATCATGTACTCCTTC 57.526 40.000 7.74 0.00 0.00 3.46
426 427 7.244558 TGGATGAGATATCATGTACTCCTTCT 58.755 38.462 7.74 0.00 0.00 2.85
427 428 7.178097 TGGATGAGATATCATGTACTCCTTCTG 59.822 40.741 7.74 0.00 0.00 3.02
428 429 7.178274 GGATGAGATATCATGTACTCCTTCTGT 59.822 40.741 7.74 0.00 0.00 3.41
429 430 7.517614 TGAGATATCATGTACTCCTTCTGTC 57.482 40.000 5.32 0.00 0.00 3.51
430 431 7.293828 TGAGATATCATGTACTCCTTCTGTCT 58.706 38.462 5.32 0.00 0.00 3.41
431 432 7.782168 TGAGATATCATGTACTCCTTCTGTCTT 59.218 37.037 5.32 0.00 0.00 3.01
432 433 8.546083 AGATATCATGTACTCCTTCTGTCTTT 57.454 34.615 5.32 0.00 0.00 2.52
433 434 8.420222 AGATATCATGTACTCCTTCTGTCTTTG 58.580 37.037 5.32 0.00 0.00 2.77
434 435 6.611613 ATCATGTACTCCTTCTGTCTTTGA 57.388 37.500 0.00 0.00 0.00 2.69
435 436 6.419484 TCATGTACTCCTTCTGTCTTTGAA 57.581 37.500 0.00 0.00 0.00 2.69
436 437 6.826668 TCATGTACTCCTTCTGTCTTTGAAA 58.173 36.000 0.00 0.00 0.00 2.69
437 438 7.279615 TCATGTACTCCTTCTGTCTTTGAAAA 58.720 34.615 0.00 0.00 0.00 2.29
438 439 7.442364 TCATGTACTCCTTCTGTCTTTGAAAAG 59.558 37.037 0.00 0.00 37.36 2.27
439 440 6.884832 TGTACTCCTTCTGTCTTTGAAAAGA 58.115 36.000 1.31 1.31 42.41 2.52
440 441 7.335627 TGTACTCCTTCTGTCTTTGAAAAGAA 58.664 34.615 7.05 0.00 45.77 2.52
441 442 6.934048 ACTCCTTCTGTCTTTGAAAAGAAG 57.066 37.500 7.05 9.72 45.77 2.85
444 445 5.505173 CTTCTGTCTTTGAAAAGAAGGCA 57.495 39.130 7.05 1.60 45.77 4.75
445 446 6.081872 CTTCTGTCTTTGAAAAGAAGGCAT 57.918 37.500 7.05 0.00 45.77 4.40
446 447 7.206981 CTTCTGTCTTTGAAAAGAAGGCATA 57.793 36.000 7.05 0.00 45.77 3.14
447 448 7.765695 TTCTGTCTTTGAAAAGAAGGCATAT 57.234 32.000 7.05 0.00 45.77 1.78
448 449 8.862325 TTCTGTCTTTGAAAAGAAGGCATATA 57.138 30.769 7.05 0.00 45.77 0.86
449 450 8.862325 TCTGTCTTTGAAAAGAAGGCATATAA 57.138 30.769 7.05 0.00 45.77 0.98
450 451 9.295825 TCTGTCTTTGAAAAGAAGGCATATAAA 57.704 29.630 7.05 0.00 45.77 1.40
463 464 9.692325 AGAAGGCATATAAATTTTCTCTCAACT 57.308 29.630 0.00 0.00 0.00 3.16
464 465 9.943163 GAAGGCATATAAATTTTCTCTCAACTC 57.057 33.333 0.00 0.00 0.00 3.01
465 466 9.466497 AAGGCATATAAATTTTCTCTCAACTCA 57.534 29.630 0.00 0.00 0.00 3.41
466 467 9.466497 AGGCATATAAATTTTCTCTCAACTCAA 57.534 29.630 0.00 0.00 0.00 3.02
471 472 6.451064 AAATTTTCTCTCAACTCAAACGGT 57.549 33.333 0.00 0.00 0.00 4.83
472 473 7.562454 AAATTTTCTCTCAACTCAAACGGTA 57.438 32.000 0.00 0.00 0.00 4.02
473 474 5.978934 TTTTCTCTCAACTCAAACGGTAC 57.021 39.130 0.00 0.00 0.00 3.34
474 475 4.659111 TTCTCTCAACTCAAACGGTACA 57.341 40.909 0.00 0.00 0.00 2.90
475 476 4.659111 TCTCTCAACTCAAACGGTACAA 57.341 40.909 0.00 0.00 0.00 2.41
476 477 5.013568 TCTCTCAACTCAAACGGTACAAA 57.986 39.130 0.00 0.00 0.00 2.83
477 478 5.421277 TCTCTCAACTCAAACGGTACAAAA 58.579 37.500 0.00 0.00 0.00 2.44
478 479 6.053005 TCTCTCAACTCAAACGGTACAAAAT 58.947 36.000 0.00 0.00 0.00 1.82
479 480 6.018262 TCTCTCAACTCAAACGGTACAAAATG 60.018 38.462 0.00 0.00 0.00 2.32
480 481 5.587043 TCTCAACTCAAACGGTACAAAATGT 59.413 36.000 0.00 0.00 0.00 2.71
481 482 5.574082 TCAACTCAAACGGTACAAAATGTG 58.426 37.500 0.00 0.00 0.00 3.21
482 483 5.354513 TCAACTCAAACGGTACAAAATGTGA 59.645 36.000 0.00 0.00 0.00 3.58
483 484 5.164606 ACTCAAACGGTACAAAATGTGAC 57.835 39.130 0.00 0.00 0.00 3.67
484 485 4.035909 ACTCAAACGGTACAAAATGTGACC 59.964 41.667 0.00 0.00 0.00 4.02
485 486 3.945921 TCAAACGGTACAAAATGTGACCA 59.054 39.130 0.00 0.00 30.01 4.02
486 487 4.398358 TCAAACGGTACAAAATGTGACCAA 59.602 37.500 0.00 0.00 30.01 3.67
487 488 4.985538 AACGGTACAAAATGTGACCAAA 57.014 36.364 0.00 0.00 30.01 3.28
488 489 4.985538 ACGGTACAAAATGTGACCAAAA 57.014 36.364 0.00 0.00 30.01 2.44
489 490 5.523438 ACGGTACAAAATGTGACCAAAAT 57.477 34.783 0.00 0.00 30.01 1.82
490 491 5.908341 ACGGTACAAAATGTGACCAAAATT 58.092 33.333 0.00 0.00 30.01 1.82
491 492 7.040473 ACGGTACAAAATGTGACCAAAATTA 57.960 32.000 0.00 0.00 30.01 1.40
492 493 7.662897 ACGGTACAAAATGTGACCAAAATTAT 58.337 30.769 0.00 0.00 30.01 1.28
493 494 8.794553 ACGGTACAAAATGTGACCAAAATTATA 58.205 29.630 0.00 0.00 30.01 0.98
494 495 9.284594 CGGTACAAAATGTGACCAAAATTATAG 57.715 33.333 0.00 0.00 30.01 1.31
610 614 8.919145 TGTGAATATTTTTCCTACAAACTTGGT 58.081 29.630 0.00 0.00 0.00 3.67
611 615 9.406828 GTGAATATTTTTCCTACAAACTTGGTC 57.593 33.333 0.00 0.00 0.00 4.02
716 722 8.676020 AGGAACCTAATTTAGTAAGAGGGTTTT 58.324 33.333 10.63 0.00 36.18 2.43
748 777 6.307776 TGAACAGGGTAAATTTGTGTATGGA 58.692 36.000 0.00 0.00 0.00 3.41
749 778 6.778069 TGAACAGGGTAAATTTGTGTATGGAA 59.222 34.615 0.00 0.00 0.00 3.53
750 779 7.287927 TGAACAGGGTAAATTTGTGTATGGAAA 59.712 33.333 0.00 0.00 0.00 3.13
753 782 7.090173 CAGGGTAAATTTGTGTATGGAAAGTG 58.910 38.462 0.00 0.00 0.00 3.16
754 783 6.780522 AGGGTAAATTTGTGTATGGAAAGTGT 59.219 34.615 0.00 0.00 0.00 3.55
766 795 9.769093 GTGTATGGAAAGTGTAATATTGTTGAC 57.231 33.333 0.00 0.00 0.00 3.18
777 806 7.480542 GTGTAATATTGTTGACGTTTGATCCAC 59.519 37.037 0.00 0.00 0.00 4.02
778 807 6.567687 AATATTGTTGACGTTTGATCCACA 57.432 33.333 0.00 0.00 0.00 4.17
780 809 4.481930 TTGTTGACGTTTGATCCACATC 57.518 40.909 0.00 0.00 0.00 3.06
781 810 3.738982 TGTTGACGTTTGATCCACATCT 58.261 40.909 0.00 0.00 0.00 2.90
782 811 4.888917 TGTTGACGTTTGATCCACATCTA 58.111 39.130 0.00 0.00 0.00 1.98
783 812 5.301555 TGTTGACGTTTGATCCACATCTAA 58.698 37.500 0.00 0.00 0.00 2.10
784 813 5.760743 TGTTGACGTTTGATCCACATCTAAA 59.239 36.000 0.00 0.00 0.00 1.85
785 814 6.261158 TGTTGACGTTTGATCCACATCTAAAA 59.739 34.615 0.00 0.00 0.00 1.52
786 815 6.869315 TGACGTTTGATCCACATCTAAAAA 57.131 33.333 0.00 0.00 0.00 1.94
802 831 9.581099 ACATCTAAAAAGAACAACGACAAAATT 57.419 25.926 0.00 0.00 0.00 1.82
831 861 8.586273 CATAAGCACAAATAAATCGAAACCAAG 58.414 33.333 0.00 0.00 0.00 3.61
837 867 7.275560 CACAAATAAATCGAAACCAAGGATTCC 59.724 37.037 3.86 0.00 30.49 3.01
852 882 1.160329 ATTCCTTCCGCGTGCATAGC 61.160 55.000 4.92 7.01 0.00 2.97
900 938 6.912951 AACAGGCAAACTCTACTAGACTTA 57.087 37.500 0.00 0.00 0.00 2.24
901 939 7.483580 AACAGGCAAACTCTACTAGACTTAT 57.516 36.000 0.00 0.00 0.00 1.73
953 992 6.002062 ACAGTTTGCCTCTAAATTCGAAAG 57.998 37.500 0.00 0.00 0.00 2.62
1066 1111 2.048222 CCGGACGCAGAAGCAGAA 60.048 61.111 0.00 0.00 42.27 3.02
1067 1112 2.097038 CCGGACGCAGAAGCAGAAG 61.097 63.158 0.00 0.00 42.27 2.85
1068 1113 2.734673 CGGACGCAGAAGCAGAAGC 61.735 63.158 0.00 0.00 42.27 3.86
1070 1115 1.633852 GGACGCAGAAGCAGAAGCAG 61.634 60.000 0.00 0.00 45.49 4.24
1071 1116 2.238071 GACGCAGAAGCAGAAGCAGC 62.238 60.000 0.00 0.00 45.49 5.25
1569 1656 1.363744 CCGCTGCTCTTCAGGTAAAG 58.636 55.000 0.00 0.00 43.06 1.85
1658 1751 9.058174 TCAAGAAGGAAATTTTACAACGTGATA 57.942 29.630 0.00 0.00 0.00 2.15
1695 1788 2.203209 GGGGATGACGGCCACATC 60.203 66.667 23.54 23.54 42.07 3.06
1770 1863 1.340568 GGTAATGTACCCGAGCTCTCC 59.659 57.143 12.85 0.00 43.18 3.71
1801 1894 5.163713 GCTTGGTTTGCTAGATTAGTTGGAG 60.164 44.000 0.00 0.00 0.00 3.86
2540 2642 0.392998 CTAGGAACCGCAGCAACCAT 60.393 55.000 0.00 0.00 0.00 3.55
3761 3878 2.490509 CAATCCTGCACATTCAGCTTCA 59.509 45.455 0.00 0.00 32.87 3.02
3762 3879 1.527034 TCCTGCACATTCAGCTTCAC 58.473 50.000 0.00 0.00 32.87 3.18
3780 3897 3.606687 TCACGTGCATAGTCTCAGTCTA 58.393 45.455 11.67 0.00 0.00 2.59
3827 3969 6.317391 GCAGTTCAATGAAGAAGTATAGCCTT 59.683 38.462 0.00 0.00 30.30 4.35
3828 3970 7.495934 GCAGTTCAATGAAGAAGTATAGCCTTA 59.504 37.037 0.00 0.00 30.30 2.69
3829 3971 8.821894 CAGTTCAATGAAGAAGTATAGCCTTAC 58.178 37.037 0.00 0.00 30.30 2.34
3944 4086 8.735692 TCAGATGCTTTGTGTCAATATTATCA 57.264 30.769 0.00 0.00 0.00 2.15
3975 4118 6.148948 CCTGCGTTGATGAAAAAGTTGATAA 58.851 36.000 0.00 0.00 0.00 1.75
3978 4121 8.586570 TGCGTTGATGAAAAAGTTGATAATTT 57.413 26.923 0.00 0.00 0.00 1.82
3979 4122 8.486383 TGCGTTGATGAAAAAGTTGATAATTTG 58.514 29.630 0.00 0.00 0.00 2.32
3981 4124 7.951565 CGTTGATGAAAAAGTTGATAATTTGCC 59.048 33.333 0.00 0.00 0.00 4.52
3982 4125 8.992073 GTTGATGAAAAAGTTGATAATTTGCCT 58.008 29.630 0.00 0.00 0.00 4.75
3984 4127 9.638239 TGATGAAAAAGTTGATAATTTGCCTAC 57.362 29.630 0.00 0.00 0.00 3.18
4218 4402 4.533815 ACAATTGGACATGCAGATCTGAT 58.466 39.130 27.04 13.48 0.00 2.90
4251 4435 4.168101 TCCTGAGGAATACACCAGTTCTT 58.832 43.478 0.00 0.00 0.00 2.52
4401 4585 4.732784 TCACACTGTTTGAAGAAAGCAAC 58.267 39.130 0.00 0.00 0.00 4.17
4426 4610 2.884012 CACACCAACCTCTTATGTGCAA 59.116 45.455 0.00 0.00 34.76 4.08
4473 4657 5.659440 TGCTTGATTCCTTATTTGGTTCC 57.341 39.130 0.00 0.00 0.00 3.62
4591 4775 9.836076 GTGGTATGTATTTTCTTGAGGTAAAAC 57.164 33.333 0.00 0.00 0.00 2.43
4592 4776 9.575868 TGGTATGTATTTTCTTGAGGTAAAACA 57.424 29.630 0.00 0.00 0.00 2.83
4685 4870 9.911788 AAGCTTCCATATCCATAGTATTAATGG 57.088 33.333 0.00 0.00 44.51 3.16
4723 4908 4.220821 TGAGGAGGTGTCTGACAATAGTTC 59.779 45.833 12.81 8.64 0.00 3.01
4754 4939 1.768275 TGCTTGTCTCAGGAAAGTGGA 59.232 47.619 0.00 0.00 0.00 4.02
4891 5077 3.887716 CCTGCTAGATTTTGCCATAGCTT 59.112 43.478 0.00 0.00 40.98 3.74
5052 5238 4.469945 TCTTCCAGTTCCTAGTGGTATTGG 59.530 45.833 0.00 0.00 44.06 3.16
5087 5273 4.088781 GCGTCTCTAGTTCGTTCAAAGAAG 59.911 45.833 0.00 0.00 0.00 2.85
5097 5283 3.029074 CGTTCAAAGAAGAAACACGCAG 58.971 45.455 0.00 0.00 0.00 5.18
5153 5339 3.196685 ACTTCTCTGGCCATAAGACTGAC 59.803 47.826 22.62 0.00 0.00 3.51
5367 5553 0.040942 TGGCTGGTATTGGGCACATT 59.959 50.000 0.00 0.00 33.16 2.71
5373 5559 3.701040 CTGGTATTGGGCACATTTAGCTT 59.299 43.478 0.00 0.00 0.00 3.74
5384 5570 8.265055 TGGGCACATTTAGCTTATATAGATACC 58.735 37.037 0.00 0.00 0.00 2.73
5436 5622 9.590451 TTTTTGCTATACGTTATGTAGCTTACT 57.410 29.630 17.10 0.00 45.72 2.24
5478 5664 1.073923 CCCAGGCTTGTGGTACTTCTT 59.926 52.381 0.00 0.00 35.60 2.52
5522 5708 6.800892 GTCTTCTTTCAAATGAGTGCATCTTC 59.199 38.462 0.00 0.00 32.35 2.87
5629 5815 1.340114 CCCTGCCCAAGTAAGACCTTC 60.340 57.143 0.00 0.00 0.00 3.46
5796 5990 6.660887 AACCGAGAACACGTTTAGTAAAAA 57.339 33.333 0.00 0.00 0.00 1.94
5993 6220 5.354767 CCTCGTAAACTGGTAAGGTTATCC 58.645 45.833 0.00 0.00 37.88 2.59
6094 6322 5.239525 GGTTACTCAATGCCCATCATTAGAC 59.760 44.000 0.00 0.00 43.21 2.59
6099 6327 1.227556 GCCCATCATTAGACGCGGT 60.228 57.895 12.47 0.00 0.00 5.68
6125 6353 3.073798 TCATTGGCTTAAAGGTGGACAGA 59.926 43.478 0.00 0.00 0.00 3.41
6240 6468 7.668052 TCAATCATTTCCATGCATCTGATATGA 59.332 33.333 20.99 20.99 33.23 2.15
6261 6489 4.764823 TGATTAAGGCGAACAACAATTCCT 59.235 37.500 0.00 0.00 0.00 3.36
6262 6490 4.497473 TTAAGGCGAACAACAATTCCTG 57.503 40.909 0.00 0.00 0.00 3.86
6522 6750 4.599041 AGTCTGTGGCTGGCAAATTATAA 58.401 39.130 5.14 0.00 0.00 0.98
6948 7176 3.372557 TTGGGGTAGCACCAATTGG 57.627 52.632 23.31 23.31 42.75 3.16
7070 7298 0.760945 CAAGAGAGGGCGGGGTAGAT 60.761 60.000 0.00 0.00 0.00 1.98
7383 7612 7.678171 AGAAATACCCCATTGTTTTCACCTTAT 59.322 33.333 0.00 0.00 0.00 1.73
7384 7613 7.418337 AATACCCCATTGTTTTCACCTTATC 57.582 36.000 0.00 0.00 0.00 1.75
7424 7654 6.187682 CCAGACTATTTATGTGAAAAGGGGT 58.812 40.000 0.00 0.00 0.00 4.95
7460 7691 1.545136 CACAAAGTGGCATGCATGGTA 59.455 47.619 27.34 0.00 0.00 3.25
7487 7718 5.707298 TCTCAACTCTTTTGCTTCCAATAGG 59.293 40.000 0.00 0.00 32.81 2.57
7617 7851 1.062587 CAAATAAAGTGCGCTCCTCCG 59.937 52.381 9.73 0.00 0.00 4.63
7644 7878 2.488204 TTTCCGTCTCCATGCATTCA 57.512 45.000 0.00 0.00 0.00 2.57
7647 7881 1.764723 TCCGTCTCCATGCATTCATCT 59.235 47.619 0.00 0.00 0.00 2.90
7667 7901 3.116356 TCTGGGGTATGTATCCATGTCCT 60.116 47.826 0.00 0.00 32.29 3.85
7680 7914 2.564062 CCATGTCCTTTTTGGTGCTCAT 59.436 45.455 0.00 0.00 37.07 2.90
7731 7965 1.986882 CCAATATCTGGGGCTGGAAC 58.013 55.000 0.00 0.00 42.17 3.62
7734 7968 2.954318 CAATATCTGGGGCTGGAACTTG 59.046 50.000 0.00 0.00 0.00 3.16
7749 7983 3.639538 GAACTTGTGTTCTCACTCGCTA 58.360 45.455 2.11 0.00 46.56 4.26
7750 7984 3.944055 ACTTGTGTTCTCACTCGCTAT 57.056 42.857 0.00 0.00 44.14 2.97
7752 7986 2.941453 TGTGTTCTCACTCGCTATCC 57.059 50.000 0.00 0.00 44.14 2.59
7789 8026 2.677524 GCTGTTGCTGGGCATGGA 60.678 61.111 0.00 0.00 38.76 3.41
7828 8065 0.471617 CTGGATTCGGGAGCCATCTT 59.528 55.000 0.00 0.00 0.00 2.40
7903 8140 2.226330 AGCGTTACTGTGCAATTTCCA 58.774 42.857 0.00 0.00 0.00 3.53
7949 8186 2.415512 GGAGCGCGAAACTGTATTTCTT 59.584 45.455 12.10 0.00 0.00 2.52
7974 8211 4.569719 CCCCCTCACTGTTGTAATACTT 57.430 45.455 0.00 0.00 0.00 2.24
8061 8304 7.733773 TCTAGATATTCTGTTGGAGGTTTCA 57.266 36.000 0.00 0.00 0.00 2.69
8088 8331 2.672714 TCCGTCTCAATCTGTTTCACG 58.327 47.619 0.00 0.00 0.00 4.35
8095 8338 6.526222 GTCTCAATCTGTTTCACGTATGTTC 58.474 40.000 0.00 0.00 0.00 3.18
8181 8424 9.520515 TTGGTTTCTGAGATTAAAATAGCTCTT 57.479 29.630 0.00 0.00 0.00 2.85
8196 8439 9.696917 AAAATAGCTCTTGGTAACTTCAAATTG 57.303 29.630 0.00 0.00 37.61 2.32
8212 8458 7.329226 ACTTCAAATTGTCAACAAGAACAACAG 59.671 33.333 1.69 0.00 39.47 3.16
8220 8466 5.456822 GTCAACAAGAACAACAGAAAGATGC 59.543 40.000 0.00 0.00 0.00 3.91
8235 8481 3.706600 AGATGCAATTGCCACCAAATT 57.293 38.095 26.94 2.89 41.18 1.82
8236 8482 3.340034 AGATGCAATTGCCACCAAATTG 58.660 40.909 26.94 4.84 41.18 2.32
8314 8562 5.622770 AACAAAGAACCAAGTTATAGGCG 57.377 39.130 0.00 0.00 0.00 5.52
8417 8704 1.796459 GTACAGGCTTACACACCGTTG 59.204 52.381 0.00 0.00 0.00 4.10
8585 8873 3.744719 CGTGGACCGCGGAGAGAA 61.745 66.667 35.90 9.56 33.47 2.87
8668 8956 4.038042 TCCTACTCCACAAAGCAGATATCG 59.962 45.833 0.00 0.00 0.00 2.92
8688 8976 2.235402 CGGGAGCTTTCTTTACCTACCA 59.765 50.000 0.00 0.00 0.00 3.25
8689 8977 3.607741 GGGAGCTTTCTTTACCTACCAC 58.392 50.000 0.00 0.00 0.00 4.16
8690 8978 3.607741 GGAGCTTTCTTTACCTACCACC 58.392 50.000 0.00 0.00 0.00 4.61
8771 9059 3.673599 GTCCAGCCAAGGAGCAAC 58.326 61.111 0.00 0.00 38.64 4.17
8835 9123 1.871126 GCAGAAGCCACCTTCCTTGC 61.871 60.000 0.17 1.82 46.97 4.01
8870 9158 1.620822 TCTTCTTTGCCCTGCCTTTC 58.379 50.000 0.00 0.00 0.00 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 2.044123 ATTGCAGGGGACGATTTCTC 57.956 50.000 0.00 0.00 0.00 2.87
112 113 2.918712 CTCTATTGCAGGGGACGATT 57.081 50.000 0.00 0.00 0.00 3.34
121 122 3.498774 ATACCCAAGCCTCTATTGCAG 57.501 47.619 0.00 0.00 0.00 4.41
122 123 3.459598 AGAATACCCAAGCCTCTATTGCA 59.540 43.478 0.00 0.00 0.00 4.08
124 125 5.070981 TCTCAGAATACCCAAGCCTCTATTG 59.929 44.000 0.00 0.00 0.00 1.90
141 142 7.727181 GGTCTAGCCTATTACATTTCTCAGAA 58.273 38.462 0.00 0.00 0.00 3.02
142 143 7.291411 GGTCTAGCCTATTACATTTCTCAGA 57.709 40.000 0.00 0.00 0.00 3.27
158 159 6.015350 TGAGTAGCACATAATAAGGTCTAGCC 60.015 42.308 0.00 0.00 37.58 3.93
160 161 7.231722 ACCTGAGTAGCACATAATAAGGTCTAG 59.768 40.741 0.00 0.00 29.57 2.43
161 162 7.067421 ACCTGAGTAGCACATAATAAGGTCTA 58.933 38.462 0.00 0.00 29.57 2.59
162 163 5.900123 ACCTGAGTAGCACATAATAAGGTCT 59.100 40.000 0.00 0.00 29.57 3.85
163 164 6.163135 ACCTGAGTAGCACATAATAAGGTC 57.837 41.667 0.00 0.00 29.57 3.85
165 166 7.254455 CGAAAACCTGAGTAGCACATAATAAGG 60.254 40.741 0.00 0.00 0.00 2.69
166 167 7.277981 ACGAAAACCTGAGTAGCACATAATAAG 59.722 37.037 0.00 0.00 0.00 1.73
167 168 7.101054 ACGAAAACCTGAGTAGCACATAATAA 58.899 34.615 0.00 0.00 0.00 1.40
168 169 6.636705 ACGAAAACCTGAGTAGCACATAATA 58.363 36.000 0.00 0.00 0.00 0.98
169 170 5.488341 ACGAAAACCTGAGTAGCACATAAT 58.512 37.500 0.00 0.00 0.00 1.28
171 172 4.491676 GACGAAAACCTGAGTAGCACATA 58.508 43.478 0.00 0.00 0.00 2.29
172 173 3.326747 GACGAAAACCTGAGTAGCACAT 58.673 45.455 0.00 0.00 0.00 3.21
174 175 2.067013 GGACGAAAACCTGAGTAGCAC 58.933 52.381 0.00 0.00 0.00 4.40
175 176 1.001633 GGGACGAAAACCTGAGTAGCA 59.998 52.381 0.00 0.00 0.00 3.49
177 178 3.611766 ATGGGACGAAAACCTGAGTAG 57.388 47.619 0.00 0.00 0.00 2.57
178 179 3.118884 GCTATGGGACGAAAACCTGAGTA 60.119 47.826 0.00 0.00 0.00 2.59
179 180 2.354805 GCTATGGGACGAAAACCTGAGT 60.355 50.000 0.00 0.00 0.00 3.41
180 181 2.280628 GCTATGGGACGAAAACCTGAG 58.719 52.381 0.00 0.00 0.00 3.35
181 182 1.626321 TGCTATGGGACGAAAACCTGA 59.374 47.619 0.00 0.00 0.00 3.86
183 184 1.339727 GGTGCTATGGGACGAAAACCT 60.340 52.381 0.00 0.00 34.50 3.50
184 185 1.092348 GGTGCTATGGGACGAAAACC 58.908 55.000 0.00 0.00 34.50 3.27
185 186 1.092348 GGGTGCTATGGGACGAAAAC 58.908 55.000 0.00 0.00 34.50 2.43
186 187 0.391927 CGGGTGCTATGGGACGAAAA 60.392 55.000 0.00 0.00 34.50 2.29
187 188 1.219664 CGGGTGCTATGGGACGAAA 59.780 57.895 0.00 0.00 34.50 3.46
188 189 1.546589 AACGGGTGCTATGGGACGAA 61.547 55.000 0.00 0.00 34.50 3.85
189 190 1.546589 AAACGGGTGCTATGGGACGA 61.547 55.000 0.00 0.00 34.50 4.20
190 191 1.078708 AAACGGGTGCTATGGGACG 60.079 57.895 0.00 0.00 34.50 4.79
191 192 1.087771 CGAAACGGGTGCTATGGGAC 61.088 60.000 0.00 0.00 0.00 4.46
192 193 1.219664 CGAAACGGGTGCTATGGGA 59.780 57.895 0.00 0.00 0.00 4.37
193 194 0.179056 ATCGAAACGGGTGCTATGGG 60.179 55.000 0.00 0.00 0.00 4.00
194 195 0.937304 CATCGAAACGGGTGCTATGG 59.063 55.000 0.00 0.00 0.00 2.74
197 198 1.448893 GCCATCGAAACGGGTGCTA 60.449 57.895 0.00 0.00 0.00 3.49
198 199 2.746277 GCCATCGAAACGGGTGCT 60.746 61.111 0.00 0.00 0.00 4.40
199 200 4.160635 CGCCATCGAAACGGGTGC 62.161 66.667 0.00 0.00 38.10 5.01
200 201 2.433491 TCGCCATCGAAACGGGTG 60.433 61.111 0.00 0.00 42.44 4.61
201 202 2.125673 CTCGCCATCGAAACGGGT 60.126 61.111 0.00 0.00 44.98 5.28
203 204 3.913573 CGCTCGCCATCGAAACGG 61.914 66.667 0.00 0.00 44.98 4.44
205 206 3.564027 CCCGCTCGCCATCGAAAC 61.564 66.667 0.00 0.00 44.98 2.78
206 207 4.077184 ACCCGCTCGCCATCGAAA 62.077 61.111 0.00 0.00 44.98 3.46
207 208 4.812476 CACCCGCTCGCCATCGAA 62.812 66.667 0.00 0.00 44.98 3.71
210 211 3.740128 ATCACACCCGCTCGCCATC 62.740 63.158 0.00 0.00 0.00 3.51
212 213 4.758251 CATCACACCCGCTCGCCA 62.758 66.667 0.00 0.00 0.00 5.69
215 216 3.605749 AACCCATCACACCCGCTCG 62.606 63.158 0.00 0.00 0.00 5.03
216 217 0.893727 AAAACCCATCACACCCGCTC 60.894 55.000 0.00 0.00 0.00 5.03
218 219 0.893727 AGAAAACCCATCACACCCGC 60.894 55.000 0.00 0.00 0.00 6.13
219 220 0.881118 CAGAAAACCCATCACACCCG 59.119 55.000 0.00 0.00 0.00 5.28
220 221 1.256812 CCAGAAAACCCATCACACCC 58.743 55.000 0.00 0.00 0.00 4.61
221 222 1.995376 ACCAGAAAACCCATCACACC 58.005 50.000 0.00 0.00 0.00 4.16
222 223 3.502211 CACTACCAGAAAACCCATCACAC 59.498 47.826 0.00 0.00 0.00 3.82
223 224 3.750371 CACTACCAGAAAACCCATCACA 58.250 45.455 0.00 0.00 0.00 3.58
224 225 2.488153 GCACTACCAGAAAACCCATCAC 59.512 50.000 0.00 0.00 0.00 3.06
225 226 2.375174 AGCACTACCAGAAAACCCATCA 59.625 45.455 0.00 0.00 0.00 3.07
226 227 2.749621 CAGCACTACCAGAAAACCCATC 59.250 50.000 0.00 0.00 0.00 3.51
227 228 2.555227 CCAGCACTACCAGAAAACCCAT 60.555 50.000 0.00 0.00 0.00 4.00
228 229 1.202879 CCAGCACTACCAGAAAACCCA 60.203 52.381 0.00 0.00 0.00 4.51
229 230 1.073284 TCCAGCACTACCAGAAAACCC 59.927 52.381 0.00 0.00 0.00 4.11
230 231 2.552743 GTTCCAGCACTACCAGAAAACC 59.447 50.000 0.00 0.00 0.00 3.27
231 232 3.477530 AGTTCCAGCACTACCAGAAAAC 58.522 45.455 0.00 0.00 0.00 2.43
232 233 3.740115 GAGTTCCAGCACTACCAGAAAA 58.260 45.455 0.00 0.00 0.00 2.29
233 234 2.288825 CGAGTTCCAGCACTACCAGAAA 60.289 50.000 0.00 0.00 0.00 2.52
234 235 1.272490 CGAGTTCCAGCACTACCAGAA 59.728 52.381 0.00 0.00 0.00 3.02
235 236 0.888619 CGAGTTCCAGCACTACCAGA 59.111 55.000 0.00 0.00 0.00 3.86
236 237 0.737715 GCGAGTTCCAGCACTACCAG 60.738 60.000 0.00 0.00 0.00 4.00
237 238 1.185618 AGCGAGTTCCAGCACTACCA 61.186 55.000 0.00 0.00 35.48 3.25
238 239 0.458716 GAGCGAGTTCCAGCACTACC 60.459 60.000 0.00 0.00 35.48 3.18
239 240 0.528470 AGAGCGAGTTCCAGCACTAC 59.472 55.000 0.00 0.00 32.79 2.73
240 241 1.743958 GTAGAGCGAGTTCCAGCACTA 59.256 52.381 0.00 0.00 35.93 2.74
241 242 0.528470 GTAGAGCGAGTTCCAGCACT 59.472 55.000 0.00 0.00 37.92 4.40
242 243 0.458716 GGTAGAGCGAGTTCCAGCAC 60.459 60.000 0.00 0.00 35.48 4.40
243 244 0.612174 AGGTAGAGCGAGTTCCAGCA 60.612 55.000 0.00 0.00 35.48 4.41
244 245 0.101579 GAGGTAGAGCGAGTTCCAGC 59.898 60.000 0.00 0.00 0.00 4.85
245 246 1.757682 AGAGGTAGAGCGAGTTCCAG 58.242 55.000 0.00 0.00 0.00 3.86
246 247 2.217510 AAGAGGTAGAGCGAGTTCCA 57.782 50.000 0.00 0.00 0.00 3.53
247 248 2.159212 GGAAAGAGGTAGAGCGAGTTCC 60.159 54.545 0.00 0.00 0.00 3.62
248 249 2.159212 GGGAAAGAGGTAGAGCGAGTTC 60.159 54.545 0.00 0.00 0.00 3.01
249 250 1.826096 GGGAAAGAGGTAGAGCGAGTT 59.174 52.381 0.00 0.00 0.00 3.01
250 251 1.006162 AGGGAAAGAGGTAGAGCGAGT 59.994 52.381 0.00 0.00 0.00 4.18
251 252 1.770294 AGGGAAAGAGGTAGAGCGAG 58.230 55.000 0.00 0.00 0.00 5.03
252 253 2.100989 GAAGGGAAAGAGGTAGAGCGA 58.899 52.381 0.00 0.00 0.00 4.93
253 254 2.100087 GAGAAGGGAAAGAGGTAGAGCG 59.900 54.545 0.00 0.00 0.00 5.03
254 255 3.100671 TGAGAAGGGAAAGAGGTAGAGC 58.899 50.000 0.00 0.00 0.00 4.09
255 256 3.129638 CGTGAGAAGGGAAAGAGGTAGAG 59.870 52.174 0.00 0.00 0.00 2.43
256 257 3.090037 CGTGAGAAGGGAAAGAGGTAGA 58.910 50.000 0.00 0.00 0.00 2.59
257 258 3.090037 TCGTGAGAAGGGAAAGAGGTAG 58.910 50.000 0.00 0.00 37.03 3.18
258 259 2.824341 GTCGTGAGAAGGGAAAGAGGTA 59.176 50.000 0.00 0.00 45.01 3.08
259 260 1.619332 GTCGTGAGAAGGGAAAGAGGT 59.381 52.381 0.00 0.00 45.01 3.85
260 261 1.896465 AGTCGTGAGAAGGGAAAGAGG 59.104 52.381 0.00 0.00 45.01 3.69
261 262 2.823154 AGAGTCGTGAGAAGGGAAAGAG 59.177 50.000 0.00 0.00 45.01 2.85
262 263 2.877866 AGAGTCGTGAGAAGGGAAAGA 58.122 47.619 0.00 0.00 45.01 2.52
263 264 3.257127 AGAAGAGTCGTGAGAAGGGAAAG 59.743 47.826 0.00 0.00 45.01 2.62
264 265 3.005897 CAGAAGAGTCGTGAGAAGGGAAA 59.994 47.826 0.00 0.00 45.01 3.13
265 266 2.558795 CAGAAGAGTCGTGAGAAGGGAA 59.441 50.000 0.00 0.00 45.01 3.97
266 267 2.163509 CAGAAGAGTCGTGAGAAGGGA 58.836 52.381 0.00 0.00 45.01 4.20
267 268 1.889829 ACAGAAGAGTCGTGAGAAGGG 59.110 52.381 0.00 0.00 45.01 3.95
268 269 3.651803 AACAGAAGAGTCGTGAGAAGG 57.348 47.619 0.00 0.00 45.01 3.46
269 270 5.614923 TCTAACAGAAGAGTCGTGAGAAG 57.385 43.478 0.00 0.00 45.01 2.85
270 271 5.531659 AGTTCTAACAGAAGAGTCGTGAGAA 59.468 40.000 0.00 0.00 36.99 2.87
271 272 5.049336 CAGTTCTAACAGAAGAGTCGTGAGA 60.049 44.000 0.00 0.00 34.42 3.27
272 273 5.150683 CAGTTCTAACAGAAGAGTCGTGAG 58.849 45.833 0.00 0.00 34.42 3.51
273 274 4.023107 CCAGTTCTAACAGAAGAGTCGTGA 60.023 45.833 0.00 0.00 34.42 4.35
274 275 4.230657 CCAGTTCTAACAGAAGAGTCGTG 58.769 47.826 0.00 0.00 34.42 4.35
275 276 3.890147 ACCAGTTCTAACAGAAGAGTCGT 59.110 43.478 0.00 0.00 34.42 4.34
276 277 4.506886 ACCAGTTCTAACAGAAGAGTCG 57.493 45.455 0.00 0.00 34.42 4.18
277 278 5.602628 ACAACCAGTTCTAACAGAAGAGTC 58.397 41.667 0.00 0.00 34.42 3.36
278 279 5.615925 ACAACCAGTTCTAACAGAAGAGT 57.384 39.130 0.00 0.00 34.42 3.24
279 280 8.608844 AAATACAACCAGTTCTAACAGAAGAG 57.391 34.615 0.00 0.00 34.42 2.85
280 281 8.429641 AGAAATACAACCAGTTCTAACAGAAGA 58.570 33.333 0.00 0.00 34.42 2.87
281 282 8.499162 CAGAAATACAACCAGTTCTAACAGAAG 58.501 37.037 0.00 0.00 34.42 2.85
282 283 7.990886 ACAGAAATACAACCAGTTCTAACAGAA 59.009 33.333 0.00 0.00 31.47 3.02
283 284 7.506114 ACAGAAATACAACCAGTTCTAACAGA 58.494 34.615 0.00 0.00 31.47 3.41
284 285 7.730364 ACAGAAATACAACCAGTTCTAACAG 57.270 36.000 0.00 0.00 31.47 3.16
285 286 7.990886 AGAACAGAAATACAACCAGTTCTAACA 59.009 33.333 0.00 0.00 41.47 2.41
286 287 8.379457 AGAACAGAAATACAACCAGTTCTAAC 57.621 34.615 0.00 0.00 41.47 2.34
287 288 8.974060 AAGAACAGAAATACAACCAGTTCTAA 57.026 30.769 0.00 0.00 42.17 2.10
288 289 8.974060 AAAGAACAGAAATACAACCAGTTCTA 57.026 30.769 0.00 0.00 42.17 2.10
289 290 7.881775 AAAGAACAGAAATACAACCAGTTCT 57.118 32.000 0.00 0.00 44.11 3.01
290 291 8.617809 TGTAAAGAACAGAAATACAACCAGTTC 58.382 33.333 0.00 0.00 35.40 3.01
291 292 8.514330 TGTAAAGAACAGAAATACAACCAGTT 57.486 30.769 0.00 0.00 33.01 3.16
292 293 8.514330 TTGTAAAGAACAGAAATACAACCAGT 57.486 30.769 0.00 0.00 39.87 4.00
293 294 9.398170 CATTGTAAAGAACAGAAATACAACCAG 57.602 33.333 0.00 0.00 38.75 4.00
294 295 9.126151 TCATTGTAAAGAACAGAAATACAACCA 57.874 29.630 0.00 0.00 38.75 3.67
295 296 9.959749 TTCATTGTAAAGAACAGAAATACAACC 57.040 29.630 0.00 0.00 38.75 3.77
301 302 9.546428 CCCTTTTTCATTGTAAAGAACAGAAAT 57.454 29.630 12.45 0.00 39.87 2.17
302 303 8.536175 ACCCTTTTTCATTGTAAAGAACAGAAA 58.464 29.630 12.45 0.00 39.87 2.52
303 304 8.073467 ACCCTTTTTCATTGTAAAGAACAGAA 57.927 30.769 12.45 0.00 39.87 3.02
304 305 7.654022 ACCCTTTTTCATTGTAAAGAACAGA 57.346 32.000 12.45 0.00 39.87 3.41
305 306 9.810545 TTTACCCTTTTTCATTGTAAAGAACAG 57.189 29.630 12.45 0.00 39.87 3.16
306 307 9.810545 CTTTACCCTTTTTCATTGTAAAGAACA 57.189 29.630 12.69 0.00 45.58 3.18
307 308 8.761497 GCTTTACCCTTTTTCATTGTAAAGAAC 58.239 33.333 19.17 4.38 45.58 3.01
308 309 7.929245 GGCTTTACCCTTTTTCATTGTAAAGAA 59.071 33.333 19.17 0.00 45.58 2.52
309 310 7.438564 GGCTTTACCCTTTTTCATTGTAAAGA 58.561 34.615 19.17 0.00 45.58 2.52
310 311 7.652300 GGCTTTACCCTTTTTCATTGTAAAG 57.348 36.000 13.37 13.37 45.53 1.85
348 349 9.239551 GGTACAATTTGGGAGTTAGTATTTCTT 57.760 33.333 0.78 0.00 0.00 2.52
349 350 8.387813 TGGTACAATTTGGGAGTTAGTATTTCT 58.612 33.333 0.78 0.00 31.92 2.52
350 351 8.570068 TGGTACAATTTGGGAGTTAGTATTTC 57.430 34.615 0.78 0.00 31.92 2.17
365 366 6.723298 TCCAAAGTGTTGATGGTACAATTT 57.277 33.333 0.00 0.00 42.44 1.82
366 367 6.723298 TTCCAAAGTGTTGATGGTACAATT 57.277 33.333 0.00 0.00 36.83 2.32
367 368 6.723298 TTTCCAAAGTGTTGATGGTACAAT 57.277 33.333 0.00 0.00 36.83 2.71
368 369 6.531503 TTTTCCAAAGTGTTGATGGTACAA 57.468 33.333 0.00 0.00 36.83 2.41
369 370 6.531503 TTTTTCCAAAGTGTTGATGGTACA 57.468 33.333 0.00 0.00 36.83 2.90
389 390 6.543465 TGATATCTCATCCATTCGTGCTTTTT 59.457 34.615 3.98 0.00 0.00 1.94
390 391 6.057533 TGATATCTCATCCATTCGTGCTTTT 58.942 36.000 3.98 0.00 0.00 2.27
391 392 5.614308 TGATATCTCATCCATTCGTGCTTT 58.386 37.500 3.98 0.00 0.00 3.51
392 393 5.219343 TGATATCTCATCCATTCGTGCTT 57.781 39.130 3.98 0.00 0.00 3.91
393 394 4.879197 TGATATCTCATCCATTCGTGCT 57.121 40.909 3.98 0.00 0.00 4.40
394 395 4.934001 ACATGATATCTCATCCATTCGTGC 59.066 41.667 0.00 0.00 40.20 5.34
395 396 7.318893 AGTACATGATATCTCATCCATTCGTG 58.681 38.462 0.00 0.00 40.20 4.35
396 397 7.363355 GGAGTACATGATATCTCATCCATTCGT 60.363 40.741 0.00 0.00 40.20 3.85
397 398 6.977502 GGAGTACATGATATCTCATCCATTCG 59.022 42.308 0.00 0.00 40.20 3.34
398 399 8.076910 AGGAGTACATGATATCTCATCCATTC 57.923 38.462 0.00 0.00 40.20 2.67
399 400 8.446714 AAGGAGTACATGATATCTCATCCATT 57.553 34.615 0.00 0.00 40.20 3.16
400 401 7.900246 AGAAGGAGTACATGATATCTCATCCAT 59.100 37.037 0.00 0.00 40.20 3.41
401 402 7.178097 CAGAAGGAGTACATGATATCTCATCCA 59.822 40.741 0.00 0.00 40.20 3.41
402 403 7.178274 ACAGAAGGAGTACATGATATCTCATCC 59.822 40.741 0.00 3.58 40.20 3.51
403 404 8.121305 ACAGAAGGAGTACATGATATCTCATC 57.879 38.462 0.00 4.48 40.20 2.92
404 405 7.949565 AGACAGAAGGAGTACATGATATCTCAT 59.050 37.037 0.00 0.00 43.02 2.90
405 406 7.293828 AGACAGAAGGAGTACATGATATCTCA 58.706 38.462 0.00 0.00 35.41 3.27
406 407 7.759489 AGACAGAAGGAGTACATGATATCTC 57.241 40.000 0.00 1.42 0.00 2.75
407 408 8.420222 CAAAGACAGAAGGAGTACATGATATCT 58.580 37.037 0.00 0.00 0.00 1.98
408 409 8.417106 TCAAAGACAGAAGGAGTACATGATATC 58.583 37.037 0.00 0.00 0.00 1.63
409 410 8.311395 TCAAAGACAGAAGGAGTACATGATAT 57.689 34.615 0.00 0.00 0.00 1.63
410 411 7.718334 TCAAAGACAGAAGGAGTACATGATA 57.282 36.000 0.00 0.00 0.00 2.15
411 412 6.611613 TCAAAGACAGAAGGAGTACATGAT 57.388 37.500 0.00 0.00 0.00 2.45
412 413 6.419484 TTCAAAGACAGAAGGAGTACATGA 57.581 37.500 0.00 0.00 0.00 3.07
413 414 7.442364 TCTTTTCAAAGACAGAAGGAGTACATG 59.558 37.037 0.00 0.00 39.95 3.21
414 415 7.509546 TCTTTTCAAAGACAGAAGGAGTACAT 58.490 34.615 0.00 0.00 39.95 2.29
415 416 6.884832 TCTTTTCAAAGACAGAAGGAGTACA 58.115 36.000 0.00 0.00 39.95 2.90
416 417 7.787725 TTCTTTTCAAAGACAGAAGGAGTAC 57.212 36.000 1.28 0.00 44.18 2.73
418 419 6.934048 CTTCTTTTCAAAGACAGAAGGAGT 57.066 37.500 1.28 0.00 44.18 3.85
422 423 5.505173 TGCCTTCTTTTCAAAGACAGAAG 57.495 39.130 1.28 3.82 44.18 2.85
423 424 7.765695 ATATGCCTTCTTTTCAAAGACAGAA 57.234 32.000 1.28 0.00 44.18 3.02
424 425 8.862325 TTATATGCCTTCTTTTCAAAGACAGA 57.138 30.769 1.28 0.00 44.18 3.41
437 438 9.692325 AGTTGAGAGAAAATTTATATGCCTTCT 57.308 29.630 0.00 0.00 0.00 2.85
438 439 9.943163 GAGTTGAGAGAAAATTTATATGCCTTC 57.057 33.333 0.00 0.00 0.00 3.46
439 440 9.466497 TGAGTTGAGAGAAAATTTATATGCCTT 57.534 29.630 0.00 0.00 0.00 4.35
440 441 9.466497 TTGAGTTGAGAGAAAATTTATATGCCT 57.534 29.630 0.00 0.00 0.00 4.75
445 446 9.280174 ACCGTTTGAGTTGAGAGAAAATTTATA 57.720 29.630 0.00 0.00 0.00 0.98
446 447 8.166422 ACCGTTTGAGTTGAGAGAAAATTTAT 57.834 30.769 0.00 0.00 0.00 1.40
447 448 7.562454 ACCGTTTGAGTTGAGAGAAAATTTA 57.438 32.000 0.00 0.00 0.00 1.40
448 449 6.451064 ACCGTTTGAGTTGAGAGAAAATTT 57.549 33.333 0.00 0.00 0.00 1.82
449 450 6.540914 TGTACCGTTTGAGTTGAGAGAAAATT 59.459 34.615 0.00 0.00 0.00 1.82
450 451 6.053005 TGTACCGTTTGAGTTGAGAGAAAAT 58.947 36.000 0.00 0.00 0.00 1.82
451 452 5.421277 TGTACCGTTTGAGTTGAGAGAAAA 58.579 37.500 0.00 0.00 0.00 2.29
452 453 5.013568 TGTACCGTTTGAGTTGAGAGAAA 57.986 39.130 0.00 0.00 0.00 2.52
453 454 4.659111 TGTACCGTTTGAGTTGAGAGAA 57.341 40.909 0.00 0.00 0.00 2.87
454 455 4.659111 TTGTACCGTTTGAGTTGAGAGA 57.341 40.909 0.00 0.00 0.00 3.10
455 456 5.728351 TTTTGTACCGTTTGAGTTGAGAG 57.272 39.130 0.00 0.00 0.00 3.20
456 457 5.587043 ACATTTTGTACCGTTTGAGTTGAGA 59.413 36.000 0.00 0.00 0.00 3.27
457 458 5.681105 CACATTTTGTACCGTTTGAGTTGAG 59.319 40.000 0.00 0.00 0.00 3.02
458 459 5.354513 TCACATTTTGTACCGTTTGAGTTGA 59.645 36.000 0.00 0.00 0.00 3.18
459 460 5.454232 GTCACATTTTGTACCGTTTGAGTTG 59.546 40.000 0.00 0.00 0.00 3.16
460 461 5.449451 GGTCACATTTTGTACCGTTTGAGTT 60.449 40.000 0.00 0.00 0.00 3.01
461 462 4.035909 GGTCACATTTTGTACCGTTTGAGT 59.964 41.667 0.00 0.00 0.00 3.41
462 463 4.035792 TGGTCACATTTTGTACCGTTTGAG 59.964 41.667 0.00 0.00 31.26 3.02
463 464 3.945921 TGGTCACATTTTGTACCGTTTGA 59.054 39.130 0.00 0.00 31.26 2.69
464 465 4.294416 TGGTCACATTTTGTACCGTTTG 57.706 40.909 0.00 0.00 31.26 2.93
465 466 4.985538 TTGGTCACATTTTGTACCGTTT 57.014 36.364 0.00 0.00 31.26 3.60
466 467 4.985538 TTTGGTCACATTTTGTACCGTT 57.014 36.364 0.00 0.00 31.26 4.44
467 468 4.985538 TTTTGGTCACATTTTGTACCGT 57.014 36.364 0.00 0.00 31.26 4.83
468 469 9.284594 CTATAATTTTGGTCACATTTTGTACCG 57.715 33.333 0.00 0.00 31.26 4.02
614 618 8.040132 TGTCTCAATTCAAGTGGTTCAAATTTT 58.960 29.630 0.00 0.00 0.00 1.82
615 619 7.555087 TGTCTCAATTCAAGTGGTTCAAATTT 58.445 30.769 0.00 0.00 0.00 1.82
616 620 7.111247 TGTCTCAATTCAAGTGGTTCAAATT 57.889 32.000 0.00 0.00 0.00 1.82
619 623 6.522625 TTTGTCTCAATTCAAGTGGTTCAA 57.477 33.333 0.00 0.00 0.00 2.69
622 626 6.530019 ACTTTTGTCTCAATTCAAGTGGTT 57.470 33.333 0.00 0.00 0.00 3.67
627 631 9.346725 GGCTTATAACTTTTGTCTCAATTCAAG 57.653 33.333 0.00 0.00 0.00 3.02
634 638 9.601217 GAGAATAGGCTTATAACTTTTGTCTCA 57.399 33.333 0.00 0.00 0.00 3.27
690 694 7.825983 AACCCTCTTACTAAATTAGGTTCCT 57.174 36.000 4.92 0.00 30.71 3.36
691 695 8.874744 AAAACCCTCTTACTAAATTAGGTTCC 57.125 34.615 4.92 0.00 35.36 3.62
730 736 6.988522 ACACTTTCCATACACAAATTTACCC 58.011 36.000 0.00 0.00 0.00 3.69
740 769 9.769093 GTCAACAATATTACACTTTCCATACAC 57.231 33.333 0.00 0.00 0.00 2.90
742 771 8.662141 ACGTCAACAATATTACACTTTCCATAC 58.338 33.333 0.00 0.00 0.00 2.39
744 773 7.681939 ACGTCAACAATATTACACTTTCCAT 57.318 32.000 0.00 0.00 0.00 3.41
746 775 8.071368 TCAAACGTCAACAATATTACACTTTCC 58.929 33.333 0.00 0.00 0.00 3.13
748 777 9.607285 GATCAAACGTCAACAATATTACACTTT 57.393 29.630 0.00 0.00 0.00 2.66
749 778 8.234546 GGATCAAACGTCAACAATATTACACTT 58.765 33.333 0.00 0.00 0.00 3.16
750 779 7.389330 TGGATCAAACGTCAACAATATTACACT 59.611 33.333 0.00 0.00 0.00 3.55
753 782 7.523219 TGTGGATCAAACGTCAACAATATTAC 58.477 34.615 0.00 0.00 0.00 1.89
754 783 7.674471 TGTGGATCAAACGTCAACAATATTA 57.326 32.000 0.00 0.00 0.00 0.98
757 786 5.937540 AGATGTGGATCAAACGTCAACAATA 59.062 36.000 17.52 0.00 33.49 1.90
758 787 4.761739 AGATGTGGATCAAACGTCAACAAT 59.238 37.500 17.52 0.13 33.49 2.71
762 791 6.869315 TTTTAGATGTGGATCAAACGTCAA 57.131 33.333 17.52 9.85 36.26 3.18
766 795 7.359595 TGTTCTTTTTAGATGTGGATCAAACG 58.640 34.615 0.00 0.00 0.00 3.60
785 814 8.539674 GCTTATGAAAATTTTGTCGTTGTTCTT 58.460 29.630 8.47 0.00 0.00 2.52
786 815 7.704472 TGCTTATGAAAATTTTGTCGTTGTTCT 59.296 29.630 8.47 0.00 0.00 3.01
802 831 9.134734 GGTTTCGATTTATTTGTGCTTATGAAA 57.865 29.630 0.00 0.00 0.00 2.69
823 852 1.472878 GCGGAAGGAATCCTTGGTTTC 59.527 52.381 20.73 4.18 44.82 2.78
831 861 0.531974 TATGCACGCGGAAGGAATCC 60.532 55.000 12.47 0.00 45.57 3.01
837 867 0.378257 AATTGCTATGCACGCGGAAG 59.622 50.000 12.47 0.13 38.71 3.46
875 913 6.912951 AGTCTAGTAGAGTTTGCCTGTTTA 57.087 37.500 0.00 0.00 0.00 2.01
879 917 8.779354 AAAATAAGTCTAGTAGAGTTTGCCTG 57.221 34.615 22.30 0.00 38.68 4.85
916 955 4.201920 GGCAAACTGTCGAGAAGAGTTTTT 60.202 41.667 8.38 0.00 31.34 1.94
917 956 3.312697 GGCAAACTGTCGAGAAGAGTTTT 59.687 43.478 8.38 0.00 31.34 2.43
953 992 4.689345 GGGCCTCACGTATATGTGTATTTC 59.311 45.833 21.61 10.68 40.74 2.17
961 1000 1.374252 GCCGGGCCTCACGTATATG 60.374 63.158 8.12 0.00 0.00 1.78
988 1027 1.745489 GGCCTTGGTAAGAGTGCGG 60.745 63.158 0.00 0.00 0.00 5.69
990 1029 0.678048 CTGGGCCTTGGTAAGAGTGC 60.678 60.000 4.53 0.00 0.00 4.40
1300 1355 2.482333 CGAGAAGGACGCGAGGGAT 61.482 63.158 15.93 0.00 44.01 3.85
1404 1484 1.831736 ACACACGGAATAGAGAAGGGG 59.168 52.381 0.00 0.00 0.00 4.79
1409 1489 4.478699 CGTTTGTACACACGGAATAGAGA 58.521 43.478 23.48 0.00 32.58 3.10
1569 1656 4.082517 GGAATTGGTGAGAAAGAAGAAGCC 60.083 45.833 0.00 0.00 0.00 4.35
1623 1710 7.645058 AAAATTTCCTTCTTGAGAACACTCA 57.355 32.000 0.00 0.00 38.65 3.41
1644 1737 6.634837 CACAAGCAATGTATCACGTTGTAAAA 59.365 34.615 11.68 0.00 44.66 1.52
1658 1751 0.313043 GCAGCTGTCACAAGCAATGT 59.687 50.000 16.64 0.00 46.08 2.71
1695 1788 3.727258 TGCCATCTCCAACCCCGG 61.727 66.667 0.00 0.00 0.00 5.73
1761 1854 2.202676 GCCACGAAGGAGAGCTCG 60.203 66.667 8.37 0.00 41.22 5.03
1770 1863 1.197721 CTAGCAAACCAAGCCACGAAG 59.802 52.381 0.00 0.00 0.00 3.79
2540 2642 0.541392 CTGGTCCCCACATCGATTGA 59.459 55.000 0.00 0.00 0.00 2.57
3745 3862 0.870393 ACGTGAAGCTGAATGTGCAG 59.130 50.000 0.00 0.00 38.91 4.41
3761 3878 4.884744 AGATTAGACTGAGACTATGCACGT 59.115 41.667 0.00 0.00 0.00 4.49
3762 3879 5.431420 AGATTAGACTGAGACTATGCACG 57.569 43.478 0.00 0.00 0.00 5.34
3829 3971 9.722056 GGTTTCATTCATGCTGTAAAATAGTAG 57.278 33.333 0.00 0.00 0.00 2.57
3840 3982 7.092079 TGTTGATTTAGGTTTCATTCATGCTG 58.908 34.615 0.00 0.00 0.00 4.41
3854 3996 7.820648 AGCACTTCTACAATTGTTGATTTAGG 58.179 34.615 20.78 11.48 30.56 2.69
3872 4014 3.748048 TGAGCACAACTATCAAGCACTTC 59.252 43.478 0.00 0.00 0.00 3.01
3930 4072 5.008019 CAGGCCACAGTGATAATATTGACAC 59.992 44.000 5.01 14.67 0.00 3.67
3944 4086 1.968017 CATCAACGCAGGCCACAGT 60.968 57.895 5.01 0.00 0.00 3.55
3975 4118 3.678056 TGACTCAACTCGTAGGCAAAT 57.322 42.857 0.00 0.00 0.00 2.32
3978 4121 3.678056 ATTTGACTCAACTCGTAGGCA 57.322 42.857 0.00 0.00 0.00 4.75
3979 4122 7.948278 AATATATTTGACTCAACTCGTAGGC 57.052 36.000 0.00 0.00 0.00 3.93
4018 4161 6.981762 AGCTAGACAGATGATTTGTTTCAG 57.018 37.500 0.00 0.00 0.00 3.02
4078 4225 8.037382 TGAGAAAGATCAAAATAAGTGCTCTG 57.963 34.615 0.00 0.00 0.00 3.35
4218 4402 7.159372 GTGTATTCCTCAGGAACAAAGAACTA 58.841 38.462 8.82 0.00 45.07 2.24
4401 4585 2.086869 CATAAGAGGTTGGTGTGCTGG 58.913 52.381 0.00 0.00 0.00 4.85
4426 4610 7.487822 TTCTACAAGAAGAATGAGGACAGAT 57.512 36.000 0.00 0.00 30.54 2.90
4473 4657 6.683974 AGTGGAGAAAATCAATATCCAACG 57.316 37.500 0.00 0.00 41.52 4.10
4633 4818 7.550551 TGTGACTTAAATGATTCTTAGGCAGAG 59.449 37.037 0.00 0.00 31.12 3.35
4723 4908 2.200067 GAGACAAGCAGACATGATCGG 58.800 52.381 0.00 0.00 0.00 4.18
4754 4939 6.239487 GCCCCTTAAAGGTCATTTTACACTTT 60.239 38.462 0.00 0.00 35.71 2.66
4857 5043 8.193438 GCAAAATCTAGCAGGTTTTCATAAGAT 58.807 33.333 4.72 0.00 0.00 2.40
4891 5077 7.913674 AAAAAGCACAAGTTTGTCCATTAAA 57.086 28.000 0.00 0.00 39.91 1.52
4918 5104 2.169352 CCTCTGATCCAGTTACCACCTG 59.831 54.545 0.00 0.00 32.61 4.00
5066 5252 7.222224 TGTTTCTTCTTTGAACGAACTAGAGAC 59.778 37.037 0.00 0.00 0.00 3.36
5384 5570 7.033185 ACTTGGCTAAAACTAACAAACACTTG 58.967 34.615 0.00 0.00 38.61 3.16
5478 5664 6.440647 AGAAGACTCCAAACTGATATACCACA 59.559 38.462 0.00 0.00 0.00 4.17
5522 5708 0.110056 GAGCACCACAATCTGCGTTG 60.110 55.000 0.00 0.00 38.51 4.10
5629 5815 1.555075 TCCAACCTAGCCAGCTAACTG 59.445 52.381 0.34 0.00 44.05 3.16
5993 6220 7.700505 TGAGCAATTTCTATTAATGAGCACTG 58.299 34.615 0.00 0.00 0.00 3.66
6013 6241 6.461648 GCCTATCTACAAACTAGTGATGAGCA 60.462 42.308 14.12 0.41 0.00 4.26
6099 6327 2.817258 CCACCTTTAAGCCAATGACGAA 59.183 45.455 0.00 0.00 0.00 3.85
6125 6353 9.388506 GCAGGCATATGTCTCTAATATTATTGT 57.611 33.333 6.92 0.00 0.00 2.71
6240 6468 4.618227 GCAGGAATTGTTGTTCGCCTTAAT 60.618 41.667 0.00 0.00 0.00 1.40
6261 6489 5.555966 TCTGTGATAAAACATACACCAGCA 58.444 37.500 0.00 0.00 33.08 4.41
6262 6490 6.371548 TCTTCTGTGATAAAACATACACCAGC 59.628 38.462 0.00 0.00 33.08 4.85
6293 6521 8.918202 ACTGGTGTCTTTAGTGATAAATTTCA 57.082 30.769 0.00 0.00 0.00 2.69
6443 6671 1.745087 ACTTTCTGCACTTGTGTGTGG 59.255 47.619 2.61 0.00 45.44 4.17
6528 6756 1.133598 CGCACATCATCCAGCAACATT 59.866 47.619 0.00 0.00 0.00 2.71
6529 6757 0.736636 CGCACATCATCCAGCAACAT 59.263 50.000 0.00 0.00 0.00 2.71
6530 6758 1.307355 CCGCACATCATCCAGCAACA 61.307 55.000 0.00 0.00 0.00 3.33
6531 6759 1.308069 ACCGCACATCATCCAGCAAC 61.308 55.000 0.00 0.00 0.00 4.17
6532 6760 0.608856 AACCGCACATCATCCAGCAA 60.609 50.000 0.00 0.00 0.00 3.91
6533 6761 0.608856 AAACCGCACATCATCCAGCA 60.609 50.000 0.00 0.00 0.00 4.41
6534 6762 0.099436 GAAACCGCACATCATCCAGC 59.901 55.000 0.00 0.00 0.00 4.85
6535 6763 1.399440 CTGAAACCGCACATCATCCAG 59.601 52.381 0.00 0.00 0.00 3.86
6536 6764 1.271325 ACTGAAACCGCACATCATCCA 60.271 47.619 0.00 0.00 0.00 3.41
6537 6765 1.453155 ACTGAAACCGCACATCATCC 58.547 50.000 0.00 0.00 0.00 3.51
6538 6766 3.262420 AGTACTGAAACCGCACATCATC 58.738 45.455 0.00 0.00 0.00 2.92
6948 7176 2.670414 CGATGTTGGACAAGCTTCTCTC 59.330 50.000 0.00 0.00 0.00 3.20
7070 7298 2.571653 ACTCCTCCCATGTCAAATTCGA 59.428 45.455 0.00 0.00 0.00 3.71
7343 7571 5.758784 GGGGTATTTCTTGGAAGAAGATACG 59.241 44.000 17.17 0.00 45.01 3.06
7420 7650 8.514330 TTTGTGTTTATATTACTCATCACCCC 57.486 34.615 0.00 0.00 0.00 4.95
7424 7654 8.673711 GCCACTTTGTGTTTATATTACTCATCA 58.326 33.333 0.00 0.00 0.00 3.07
7460 7691 7.951347 ATTGGAAGCAAAAGAGTTGAGATAT 57.049 32.000 0.00 0.00 0.00 1.63
7667 7901 2.552315 GGTCTCGAATGAGCACCAAAAA 59.448 45.455 0.00 0.00 42.26 1.94
7734 7968 2.941453 TGGATAGCGAGTGAGAACAC 57.059 50.000 0.00 0.00 46.24 3.32
7745 7979 1.526887 CTGTAACGGCATTGGATAGCG 59.473 52.381 0.00 0.00 0.00 4.26
7749 7983 2.575532 CCATCTGTAACGGCATTGGAT 58.424 47.619 0.00 0.00 0.00 3.41
7750 7984 2.016604 GCCATCTGTAACGGCATTGGA 61.017 52.381 0.00 0.00 45.52 3.53
7752 7986 3.924238 GCCATCTGTAACGGCATTG 57.076 52.632 0.00 0.00 45.52 2.82
7789 8026 2.114616 GAGATGACATCCACCAGACCT 58.885 52.381 11.92 0.00 0.00 3.85
7903 8140 3.245229 TGACTAATGTGGGAGTGGCAAAT 60.245 43.478 0.00 0.00 0.00 2.32
7932 8169 4.156182 GGGAAAAGAAATACAGTTTCGCG 58.844 43.478 0.00 0.00 34.56 5.87
7974 8211 1.138069 TCCGCAGACTGAACTGAAACA 59.862 47.619 6.65 0.00 39.94 2.83
8061 8304 6.878923 TGAAACAGATTGAGACGGATTGTATT 59.121 34.615 0.00 0.00 0.00 1.89
8088 8331 9.162764 TCTAGCTAACTCCAAAAATGAACATAC 57.837 33.333 0.00 0.00 0.00 2.39
8095 8338 9.617975 CTTTCTTTCTAGCTAACTCCAAAAATG 57.382 33.333 0.00 0.00 0.00 2.32
8181 8424 7.397892 TCTTGTTGACAATTTGAAGTTACCA 57.602 32.000 2.79 0.00 35.02 3.25
8196 8439 5.456822 GCATCTTTCTGTTGTTCTTGTTGAC 59.543 40.000 0.00 0.00 0.00 3.18
8212 8458 2.747396 TGGTGGCAATTGCATCTTTC 57.253 45.000 30.32 13.32 44.36 2.62
8220 8466 2.031857 GCACACAATTTGGTGGCAATTG 60.032 45.455 15.32 0.00 44.15 2.32
8235 8481 3.194861 GTGTTGACTAACTGAGCACACA 58.805 45.455 0.00 0.00 37.68 3.72
8236 8482 2.544267 GGTGTTGACTAACTGAGCACAC 59.456 50.000 0.00 0.00 37.68 3.82
8314 8562 3.067684 ACATGTAAACCTGGGCTGTAC 57.932 47.619 0.00 0.00 0.00 2.90
8417 8704 4.152580 GGAACTCCAAAATCAGTCGACTTC 59.847 45.833 17.26 6.13 35.64 3.01
8582 8870 3.201708 AGCCTTGCTGGTGATATCTTTCT 59.798 43.478 3.98 0.00 37.57 2.52
8583 8871 3.549794 AGCCTTGCTGGTGATATCTTTC 58.450 45.455 3.98 0.00 37.57 2.62
8584 8872 3.659183 AGCCTTGCTGGTGATATCTTT 57.341 42.857 3.98 0.00 37.57 2.52
8585 8873 3.549794 GAAGCCTTGCTGGTGATATCTT 58.450 45.455 3.98 0.00 39.62 2.40
8668 8956 3.607741 GTGGTAGGTAAAGAAAGCTCCC 58.392 50.000 0.00 0.00 0.00 4.30
8688 8976 1.403780 GCAGTTCGACGAATAGGTGGT 60.404 52.381 14.27 0.00 0.00 4.16
8689 8977 1.278238 GCAGTTCGACGAATAGGTGG 58.722 55.000 14.27 1.75 0.00 4.61
8690 8978 1.654105 GTGCAGTTCGACGAATAGGTG 59.346 52.381 14.27 10.10 0.00 4.00
8958 9246 2.158842 AGAACATATGCCTCCAGCTCAC 60.159 50.000 1.58 0.00 44.23 3.51
8984 9272 1.042229 AGTGGCTGAAAATGCTGCAA 58.958 45.000 6.36 0.00 34.81 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.