Multiple sequence alignment - TraesCS5B01G188700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G188700 chr5B 100.000 6602 0 0 684 7285 340625745 340632346 0.000000e+00 12192.0
1 TraesCS5B01G188700 chr5B 100.000 293 0 0 1 293 340625062 340625354 6.430000e-150 542.0
2 TraesCS5B01G188700 chr5B 95.238 42 2 0 5853 5894 340630878 340630919 4.720000e-07 67.6
3 TraesCS5B01G188700 chr5B 95.238 42 2 0 5817 5858 340630914 340630955 4.720000e-07 67.6
4 TraesCS5B01G188700 chr5A 93.153 2921 124 25 688 3583 396683913 396686782 0.000000e+00 4217.0
5 TraesCS5B01G188700 chr5A 95.513 1783 66 4 3635 5410 396686787 396688562 0.000000e+00 2837.0
6 TraesCS5B01G188700 chr5A 90.273 843 33 19 5853 6667 396689108 396689929 0.000000e+00 1057.0
7 TraesCS5B01G188700 chr5A 88.197 305 14 8 5567 5858 396688854 396689149 1.950000e-90 344.0
8 TraesCS5B01G188700 chr5A 83.386 319 9 19 1 293 396683478 396683778 9.380000e-64 255.0
9 TraesCS5B01G188700 chr5A 91.579 190 8 4 6775 6956 396690089 396690278 9.380000e-64 255.0
10 TraesCS5B01G188700 chr5A 91.935 124 9 1 5443 5565 396688564 396688687 9.720000e-39 172.0
11 TraesCS5B01G188700 chr5D 94.708 2343 81 19 727 3052 299409139 299411455 0.000000e+00 3600.0
12 TraesCS5B01G188700 chr5D 95.280 1949 54 11 3931 5858 299412317 299414248 0.000000e+00 3055.0
13 TraesCS5B01G188700 chr5D 89.645 985 45 29 5853 6781 299414207 299415190 0.000000e+00 1201.0
14 TraesCS5B01G188700 chr5D 85.876 531 39 10 3062 3583 299411494 299411997 3.870000e-147 532.0
15 TraesCS5B01G188700 chr5D 92.384 302 5 5 1 293 299408674 299408966 1.460000e-111 414.0
16 TraesCS5B01G188700 chr5D 95.413 109 4 1 3637 3744 299412004 299412112 9.720000e-39 172.0
17 TraesCS5B01G188700 chr1A 99.088 329 3 0 6957 7285 568780942 568780614 6.290000e-165 592.0
18 TraesCS5B01G188700 chr7B 95.745 329 13 1 6957 7285 642082822 642083149 5.010000e-146 529.0
19 TraesCS5B01G188700 chr7D 94.545 330 12 4 6957 7285 197184605 197184929 8.430000e-139 505.0
20 TraesCS5B01G188700 chr4A 93.713 334 21 0 4176 4509 200168950 200169283 1.090000e-137 501.0
21 TraesCS5B01G188700 chr7A 94.931 217 11 0 6957 7173 680756438 680756222 2.520000e-89 340.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G188700 chr5B 340625062 340632346 7284 False 3217.300000 12192 97.619000 1 7285 4 chr5B.!!$F1 7284
1 TraesCS5B01G188700 chr5A 396683478 396690278 6800 False 1305.285714 4217 90.576571 1 6956 7 chr5A.!!$F1 6955
2 TraesCS5B01G188700 chr5D 299408674 299415190 6516 False 1495.666667 3600 92.217667 1 6781 6 chr5D.!!$F1 6780

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
242 274 0.411452 TGCCCTGTCCTTCTCTCTCT 59.589 55.000 0.00 0.0 0.00 3.10 F
1295 1345 0.031994 GCGGTGTTGCTTTCCATGTT 59.968 50.000 0.00 0.0 0.00 2.71 F
1554 1609 0.038343 GTAGTTGGTCGGCGGTTACA 60.038 55.000 7.21 0.0 0.00 2.41 F
3333 3434 0.038599 ATGGCATTCTGGTGTGAGCA 59.961 50.000 0.00 0.0 0.00 4.26 F
3492 3594 0.619255 TGCTCCGATTCCCCACCTAA 60.619 55.000 0.00 0.0 0.00 2.69 F
4347 4553 1.202698 GGGTGGATCGAAGAGAATGGG 60.203 57.143 0.00 0.0 43.63 4.00 F
4731 4937 2.093658 TCATAGAGCCTTTGTCCCGTTC 60.094 50.000 0.00 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1526 1581 1.556564 CGACCAACTACGGCATACAG 58.443 55.000 0.00 0.0 0.00 2.74 R
2378 2435 1.469308 GAGTCAGGTAGGTGAGTGACG 59.531 57.143 0.00 0.0 43.38 4.35 R
3401 3502 0.108585 AGAATGGCAGTGTTGGACGT 59.891 50.000 0.00 0.0 0.00 4.34 R
4347 4553 1.598130 AGGTTTCACAGGCGCAGTC 60.598 57.895 10.83 0.0 0.00 3.51 R
5216 5423 4.437930 GCTGGCAAGTAATGTCTGATGAAC 60.438 45.833 0.00 0.0 34.78 3.18 R
5670 6056 0.317770 AACAAACATCGCGCAACTGG 60.318 50.000 8.75 0.0 0.00 4.00 R
6706 7164 0.179153 GAAGCAAGCGAGGAAATGGC 60.179 55.000 0.00 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.391577 CGTCCCAATCAATCATGGCA 58.608 50.000 0.00 0.00 35.28 4.92
235 267 3.672295 CTCCGCTGCCCTGTCCTTC 62.672 68.421 0.00 0.00 0.00 3.46
236 268 3.710722 CCGCTGCCCTGTCCTTCT 61.711 66.667 0.00 0.00 0.00 2.85
237 269 2.125350 CGCTGCCCTGTCCTTCTC 60.125 66.667 0.00 0.00 0.00 2.87
238 270 2.654079 CGCTGCCCTGTCCTTCTCT 61.654 63.158 0.00 0.00 0.00 3.10
239 271 1.220477 GCTGCCCTGTCCTTCTCTC 59.780 63.158 0.00 0.00 0.00 3.20
240 272 1.264045 GCTGCCCTGTCCTTCTCTCT 61.264 60.000 0.00 0.00 0.00 3.10
241 273 0.823460 CTGCCCTGTCCTTCTCTCTC 59.177 60.000 0.00 0.00 0.00 3.20
242 274 0.411452 TGCCCTGTCCTTCTCTCTCT 59.589 55.000 0.00 0.00 0.00 3.10
243 275 1.111277 GCCCTGTCCTTCTCTCTCTC 58.889 60.000 0.00 0.00 0.00 3.20
706 738 3.434319 GTGCCTCATGCGGTGGTG 61.434 66.667 3.18 0.00 45.60 4.17
707 739 4.720902 TGCCTCATGCGGTGGTGG 62.721 66.667 3.18 0.00 45.60 4.61
708 740 4.722700 GCCTCATGCGGTGGTGGT 62.723 66.667 3.18 0.00 32.58 4.16
709 741 2.436646 CCTCATGCGGTGGTGGTC 60.437 66.667 0.00 0.00 0.00 4.02
710 742 2.436646 CTCATGCGGTGGTGGTCC 60.437 66.667 0.00 0.00 0.00 4.46
846 878 3.943034 TTTCGGCGGTTGCGTGTG 61.943 61.111 7.21 0.00 44.10 3.82
918 950 2.279784 GGGAGCGAGCTGATTCGG 60.280 66.667 0.84 0.00 40.79 4.30
954 986 2.183300 CGGCGGGATCTTCGTGAA 59.817 61.111 0.00 0.00 0.00 3.18
968 1000 3.937151 GTGAAGCTCTTTTCGCGAG 57.063 52.632 9.59 0.00 0.00 5.03
969 1001 0.440371 GTGAAGCTCTTTTCGCGAGG 59.560 55.000 9.59 4.10 0.00 4.63
970 1002 0.670546 TGAAGCTCTTTTCGCGAGGG 60.671 55.000 9.59 0.00 0.00 4.30
971 1003 1.362406 GAAGCTCTTTTCGCGAGGGG 61.362 60.000 9.59 5.07 0.00 4.79
972 1004 2.804828 AAGCTCTTTTCGCGAGGGGG 62.805 60.000 9.59 4.68 0.00 5.40
973 1005 2.978824 CTCTTTTCGCGAGGGGGA 59.021 61.111 9.59 5.97 0.00 4.81
974 1006 1.153549 CTCTTTTCGCGAGGGGGAG 60.154 63.158 9.59 11.88 36.39 4.30
1295 1345 0.031994 GCGGTGTTGCTTTCCATGTT 59.968 50.000 0.00 0.00 0.00 2.71
1376 1426 4.261994 GGTTGTTAATGCTGATGGTGTGTT 60.262 41.667 0.00 0.00 0.00 3.32
1393 1447 2.103263 GTGTTCCTCTTCCACAGTGTCT 59.897 50.000 0.00 0.00 0.00 3.41
1433 1488 1.880027 GATTCCATGTAACGGATGCCC 59.120 52.381 0.00 0.00 30.99 5.36
1526 1581 6.129300 CGTTTTGGATGTTTCGGTTTGATTAC 60.129 38.462 0.00 0.00 0.00 1.89
1554 1609 0.038343 GTAGTTGGTCGGCGGTTACA 60.038 55.000 7.21 0.00 0.00 2.41
1610 1665 6.043411 GTGTGTTTTGGTGGTTAAATTGCTA 58.957 36.000 0.00 0.00 0.00 3.49
1816 1871 4.201763 GCTGAGCTGTTAGTCTGTTAATGC 60.202 45.833 0.00 0.00 0.00 3.56
1862 1917 3.061697 GTGTCGTTATGGATGTTTCGGTC 59.938 47.826 0.00 0.00 0.00 4.79
1873 1928 1.872952 TGTTTCGGTCTGATGCAGTTG 59.127 47.619 0.00 0.00 32.61 3.16
1876 1931 0.320683 TCGGTCTGATGCAGTTGTGG 60.321 55.000 0.00 0.00 32.61 4.17
1959 2015 2.693074 GGATGTGTCTGTTTTGGTGGTT 59.307 45.455 0.00 0.00 0.00 3.67
1967 2023 4.208253 GTCTGTTTTGGTGGTTAAATTGCG 59.792 41.667 0.00 0.00 0.00 4.85
1996 2052 4.937201 TGAGTGAACTATGTGTGAGTGT 57.063 40.909 0.00 0.00 0.00 3.55
2083 2139 4.606210 TGTCCTAGTAGTATGACAAGCCA 58.394 43.478 11.88 0.00 32.63 4.75
2091 2147 4.223320 AGTATGACAAGCCAACAAAACG 57.777 40.909 0.00 0.00 0.00 3.60
2109 2165 6.250527 ACAAAACGCATTAATCGTGAAATAGC 59.749 34.615 11.80 0.00 40.36 2.97
2240 2297 0.324943 ACATGTGGGACTAGTGGCAC 59.675 55.000 10.29 10.29 0.00 5.01
2241 2298 0.324614 CATGTGGGACTAGTGGCACA 59.675 55.000 21.41 5.00 0.00 4.57
2312 2369 2.805671 TCACACAGGTTGCACTAAATCG 59.194 45.455 0.00 0.00 0.00 3.34
2445 2502 9.226606 CCTGTCTGATGTTTAAAATAGTAACCA 57.773 33.333 0.00 0.00 0.00 3.67
2559 2616 1.967779 TGAAGCCCTTTTGGTTTAGCC 59.032 47.619 0.00 0.00 37.73 3.93
2588 2646 9.237187 TGGCATCTATTTCTTACAAACAATACA 57.763 29.630 0.00 0.00 0.00 2.29
2647 2705 2.261345 CATTTTTATGCCGTGCTGTGG 58.739 47.619 0.00 0.00 0.00 4.17
2662 2720 5.515626 CGTGCTGTGGAATCTAGTTAGTTAC 59.484 44.000 0.00 0.00 0.00 2.50
2777 2838 7.114095 AGACAAGAACAGTTTGGGTAAGTAAA 58.886 34.615 0.00 0.00 0.00 2.01
2928 2989 9.396022 CCAGCTACTTAATTTTCCTCTAATTCA 57.604 33.333 0.00 0.00 0.00 2.57
2941 3004 7.200434 TCCTCTAATTCAAGGATATATGCCC 57.800 40.000 0.00 0.00 36.75 5.36
3030 3093 1.212688 CTCCAGTTGGCATATGGGTCA 59.787 52.381 16.01 0.00 34.71 4.02
3036 3099 3.134804 AGTTGGCATATGGGTCAGTAGTC 59.865 47.826 4.56 0.00 0.00 2.59
3052 3115 7.276658 GGTCAGTAGTCTCTGTCATGTTTATTG 59.723 40.741 0.00 0.00 36.85 1.90
3088 3180 2.016096 TCCCTTCTCCCCTTCTCCTTA 58.984 52.381 0.00 0.00 0.00 2.69
3222 3321 8.593945 TTTCTGATTAAATGGTTGCCTATTCT 57.406 30.769 0.00 0.00 0.00 2.40
3290 3391 2.159043 CGACCAGGTATCTGCACTCAAT 60.159 50.000 0.00 0.00 39.61 2.57
3307 3408 4.880120 ACTCAATGATACCAGCAACTGATG 59.120 41.667 0.00 0.00 32.44 3.07
3333 3434 0.038599 ATGGCATTCTGGTGTGAGCA 59.961 50.000 0.00 0.00 0.00 4.26
3337 3438 2.551459 GGCATTCTGGTGTGAGCATATC 59.449 50.000 0.00 0.00 0.00 1.63
3342 3443 4.307443 TCTGGTGTGAGCATATCGTAAG 57.693 45.455 0.00 0.00 0.00 2.34
3381 3482 5.975988 ATTAATAGCCTCTCCAAGTCCAA 57.024 39.130 0.00 0.00 0.00 3.53
3436 3538 4.610945 CCATTCTTTGTCAAACAGTCACC 58.389 43.478 0.00 0.00 0.00 4.02
3492 3594 0.619255 TGCTCCGATTCCCCACCTAA 60.619 55.000 0.00 0.00 0.00 2.69
3590 3692 4.147219 GCAACTTGCAAGGTTACTGTAG 57.853 45.455 29.18 11.11 44.26 2.74
3591 3693 3.058224 GCAACTTGCAAGGTTACTGTAGG 60.058 47.826 29.18 10.38 44.26 3.18
3592 3694 4.134563 CAACTTGCAAGGTTACTGTAGGT 58.865 43.478 29.18 2.53 0.00 3.08
3593 3695 4.432980 ACTTGCAAGGTTACTGTAGGTT 57.567 40.909 29.18 1.39 0.00 3.50
3594 3696 4.788679 ACTTGCAAGGTTACTGTAGGTTT 58.211 39.130 29.18 0.93 0.00 3.27
3595 3697 5.932455 ACTTGCAAGGTTACTGTAGGTTTA 58.068 37.500 29.18 0.00 0.00 2.01
3596 3698 5.761726 ACTTGCAAGGTTACTGTAGGTTTAC 59.238 40.000 29.18 0.00 0.00 2.01
3597 3699 5.556006 TGCAAGGTTACTGTAGGTTTACT 57.444 39.130 0.00 0.00 0.00 2.24
3598 3700 5.932455 TGCAAGGTTACTGTAGGTTTACTT 58.068 37.500 0.00 0.00 0.00 2.24
3599 3701 5.993441 TGCAAGGTTACTGTAGGTTTACTTC 59.007 40.000 0.00 0.00 0.00 3.01
3600 3702 5.119743 GCAAGGTTACTGTAGGTTTACTTCG 59.880 44.000 0.00 0.00 0.00 3.79
3601 3703 5.397142 AGGTTACTGTAGGTTTACTTCGG 57.603 43.478 0.00 0.00 0.00 4.30
3602 3704 4.835056 AGGTTACTGTAGGTTTACTTCGGT 59.165 41.667 0.00 0.00 39.19 4.69
3603 3705 5.305386 AGGTTACTGTAGGTTTACTTCGGTT 59.695 40.000 0.00 0.00 37.31 4.44
3604 3706 6.493458 AGGTTACTGTAGGTTTACTTCGGTTA 59.507 38.462 0.00 0.00 37.31 2.85
3605 3707 6.586463 GGTTACTGTAGGTTTACTTCGGTTAC 59.414 42.308 0.00 0.00 37.31 2.50
3606 3708 7.371159 GTTACTGTAGGTTTACTTCGGTTACT 58.629 38.462 0.00 0.00 37.31 2.24
3607 3709 6.410942 ACTGTAGGTTTACTTCGGTTACTT 57.589 37.500 0.00 0.00 32.81 2.24
3608 3710 7.524717 ACTGTAGGTTTACTTCGGTTACTTA 57.475 36.000 0.00 0.00 32.81 2.24
3609 3711 7.597386 ACTGTAGGTTTACTTCGGTTACTTAG 58.403 38.462 0.00 0.00 32.81 2.18
3610 3712 7.448469 ACTGTAGGTTTACTTCGGTTACTTAGA 59.552 37.037 0.00 0.00 32.81 2.10
3611 3713 8.353423 TGTAGGTTTACTTCGGTTACTTAGAT 57.647 34.615 0.00 0.00 0.00 1.98
3612 3714 8.806146 TGTAGGTTTACTTCGGTTACTTAGATT 58.194 33.333 0.00 0.00 0.00 2.40
3834 3937 6.398655 TTCTACCAGTACCTCTTCCTCTAA 57.601 41.667 0.00 0.00 0.00 2.10
3971 4176 6.378848 TGCCCCATACTTAAAATTACACTTCC 59.621 38.462 0.00 0.00 0.00 3.46
3979 4184 6.715264 ACTTAAAATTACACTTCCCTGTCCTG 59.285 38.462 0.00 0.00 0.00 3.86
4003 4208 1.474143 GGATACCTCAGACTTGGCTGC 60.474 57.143 0.00 0.00 35.86 5.25
4088 4294 7.435192 GGTATGCTAAAACTGTTATTCATTGCC 59.565 37.037 0.00 0.00 0.00 4.52
4347 4553 1.202698 GGGTGGATCGAAGAGAATGGG 60.203 57.143 0.00 0.00 43.63 4.00
4516 4722 4.040217 AGGATTCTCAATGATTCTCCTCCG 59.960 45.833 2.87 0.00 0.00 4.63
4659 4865 5.504665 GCGTGGAAGTTTGGATAATCATCTG 60.505 44.000 0.00 0.00 0.00 2.90
4731 4937 2.093658 TCATAGAGCCTTTGTCCCGTTC 60.094 50.000 0.00 0.00 0.00 3.95
5216 5423 5.127845 AGAGTATGTCATGACAGGTAAGTGG 59.872 44.000 30.63 0.00 45.48 4.00
5271 5478 7.030165 AGAGTGAATGATACGTACAGAAACAG 58.970 38.462 0.00 0.00 0.00 3.16
5296 5503 4.826274 AGCTAGATTTGGAGTACTTGCA 57.174 40.909 0.00 0.00 34.67 4.08
5302 5509 5.675538 AGATTTGGAGTACTTGCATAGGTC 58.324 41.667 0.00 0.00 0.00 3.85
5321 5528 6.616237 AGGTCACTATGCATCATATGATCA 57.384 37.500 15.49 15.55 31.21 2.92
5333 5540 7.229707 TGCATCATATGATCATTGTCATTGACA 59.770 33.333 15.49 15.41 39.45 3.58
5363 5570 6.401047 AGATATGAAATGATGCTTGTTGGG 57.599 37.500 0.00 0.00 0.00 4.12
5418 5625 8.082242 ACAGTTTGAGCAATTTCTTGGTATTAC 58.918 33.333 0.00 0.00 42.91 1.89
5420 5627 8.082242 AGTTTGAGCAATTTCTTGGTATTACAC 58.918 33.333 0.00 0.00 42.91 2.90
5533 5740 7.156876 TGTATAACTGATTTCCTGGCAAAAG 57.843 36.000 0.00 0.00 0.00 2.27
5534 5741 3.391506 AACTGATTTCCTGGCAAAAGC 57.608 42.857 0.00 0.00 0.00 3.51
5562 5769 3.366883 GCGCCAATCTACCAAAATCAACA 60.367 43.478 0.00 0.00 0.00 3.33
5563 5770 4.165779 CGCCAATCTACCAAAATCAACAC 58.834 43.478 0.00 0.00 0.00 3.32
5564 5771 4.082787 CGCCAATCTACCAAAATCAACACT 60.083 41.667 0.00 0.00 0.00 3.55
5565 5772 5.123186 CGCCAATCTACCAAAATCAACACTA 59.877 40.000 0.00 0.00 0.00 2.74
5670 6056 9.196139 AGATAGATGTATTCTCCTTATAGTGGC 57.804 37.037 0.00 0.00 35.79 5.01
5676 6062 4.487714 TTCTCCTTATAGTGGCCAGTTG 57.512 45.455 20.55 6.97 0.00 3.16
5872 6258 3.283684 CCCAAACGGCGAGCACAA 61.284 61.111 16.62 0.00 0.00 3.33
5873 6259 2.051345 CCAAACGGCGAGCACAAC 60.051 61.111 16.62 0.00 0.00 3.32
5874 6260 2.051345 CAAACGGCGAGCACAACC 60.051 61.111 16.62 0.00 0.00 3.77
5875 6261 2.203153 AAACGGCGAGCACAACCT 60.203 55.556 16.62 0.00 0.00 3.50
5876 6262 1.822186 AAACGGCGAGCACAACCTT 60.822 52.632 16.62 0.00 0.00 3.50
5877 6263 2.058829 AAACGGCGAGCACAACCTTG 62.059 55.000 16.62 0.00 0.00 3.61
5878 6264 2.972505 CGGCGAGCACAACCTTGT 60.973 61.111 0.00 0.00 43.36 3.16
5957 6343 1.379642 GGCTGGAGGGCAATTTCTCG 61.380 60.000 0.00 0.00 40.53 4.04
5999 6385 2.126385 CAATTGGCACGCGCATGT 60.126 55.556 5.73 0.00 41.24 3.21
6176 6562 0.466922 GCCATAGCCTCAAGGTGCAT 60.467 55.000 0.00 0.00 37.57 3.96
6293 6679 4.260212 CCGAACGTGAAATAACCATAGCTG 60.260 45.833 0.00 0.00 0.00 4.24
6426 6812 5.219343 TGAATTGATGTCTGTCTGTCTGT 57.781 39.130 0.00 0.00 0.00 3.41
6427 6813 4.992951 TGAATTGATGTCTGTCTGTCTGTG 59.007 41.667 0.00 0.00 0.00 3.66
6482 6895 3.426525 GGAAAAAGAAGATGCTTTGCGTG 59.573 43.478 0.00 0.00 38.08 5.34
6515 6928 4.346127 TCTCAACTGGATGCTGCTATACAT 59.654 41.667 0.00 0.00 0.00 2.29
6516 6929 4.635223 TCAACTGGATGCTGCTATACATC 58.365 43.478 0.00 0.00 41.60 3.06
6517 6930 4.346127 TCAACTGGATGCTGCTATACATCT 59.654 41.667 0.00 0.00 41.93 2.90
6518 6931 4.533919 ACTGGATGCTGCTATACATCTC 57.466 45.455 0.00 0.00 41.93 2.75
6519 6932 4.158786 ACTGGATGCTGCTATACATCTCT 58.841 43.478 0.00 0.00 41.93 3.10
6520 6933 4.592351 ACTGGATGCTGCTATACATCTCTT 59.408 41.667 0.00 0.00 41.93 2.85
6521 6934 5.071519 ACTGGATGCTGCTATACATCTCTTT 59.928 40.000 0.00 0.00 41.93 2.52
6529 6942 8.478066 TGCTGCTATACATCTCTTTTCTCTTTA 58.522 33.333 0.00 0.00 0.00 1.85
6569 6992 2.768344 TTCATCCCTCCCTCGGGC 60.768 66.667 0.00 0.00 44.30 6.13
6582 7005 2.670251 CGGGCGGCACTTGGTTAA 60.670 61.111 12.47 0.00 0.00 2.01
6681 7108 1.486726 CGGTTTAGGAGAGGAGGCATT 59.513 52.381 0.00 0.00 0.00 3.56
6694 7152 0.961019 AGGCATTTTTCTGCGAGCAA 59.039 45.000 0.00 0.00 43.23 3.91
6740 7200 1.633852 GCTTCTTGCGCACAGAGAGG 61.634 60.000 11.12 12.76 0.00 3.69
6769 7229 5.428184 AGGACCTTTATCCTCTTCTTGTG 57.572 43.478 0.00 0.00 46.92 3.33
6795 7279 6.705381 CCAAGAGGCAATGTCTATAAGAAGAG 59.295 42.308 0.00 0.00 0.00 2.85
6797 7281 7.667575 AGAGGCAATGTCTATAAGAAGAGAA 57.332 36.000 0.00 0.00 0.00 2.87
6798 7282 8.261349 AGAGGCAATGTCTATAAGAAGAGAAT 57.739 34.615 0.00 0.00 0.00 2.40
6799 7283 8.149647 AGAGGCAATGTCTATAAGAAGAGAATG 58.850 37.037 0.00 0.00 0.00 2.67
6800 7284 7.222872 AGGCAATGTCTATAAGAAGAGAATGG 58.777 38.462 0.00 0.00 0.00 3.16
6801 7285 6.429385 GGCAATGTCTATAAGAAGAGAATGGG 59.571 42.308 0.00 0.00 0.00 4.00
6881 7373 4.709604 AACGCTAGGTCCGGGGGT 62.710 66.667 0.00 0.00 0.00 4.95
6906 7398 0.745845 ATGGACGGTGAAGCTGATGC 60.746 55.000 0.00 0.00 40.05 3.91
6930 7422 0.326238 TTCCTCCCTGATTAGCCGGT 60.326 55.000 1.90 0.00 0.00 5.28
6939 7431 4.263068 CCCTGATTAGCCGGTTCTATCATT 60.263 45.833 13.83 0.00 0.00 2.57
6949 7441 2.555199 GTTCTATCATTGCACGGCTCT 58.445 47.619 0.00 0.00 0.00 4.09
6956 7448 0.598680 ATTGCACGGCTCTATCGCTC 60.599 55.000 0.00 0.00 0.00 5.03
6957 7449 2.727647 GCACGGCTCTATCGCTCG 60.728 66.667 0.00 0.00 0.00 5.03
6958 7450 3.023118 CACGGCTCTATCGCTCGA 58.977 61.111 0.00 0.00 0.00 4.04
6959 7451 1.355563 CACGGCTCTATCGCTCGAA 59.644 57.895 0.00 0.00 0.00 3.71
6960 7452 0.248498 CACGGCTCTATCGCTCGAAA 60.248 55.000 0.00 0.00 0.00 3.46
6961 7453 0.454600 ACGGCTCTATCGCTCGAAAA 59.545 50.000 0.00 0.00 0.00 2.29
6962 7454 1.067212 ACGGCTCTATCGCTCGAAAAT 59.933 47.619 0.00 0.00 0.00 1.82
6963 7455 2.128035 CGGCTCTATCGCTCGAAAATT 58.872 47.619 0.00 0.00 0.00 1.82
6964 7456 2.154007 CGGCTCTATCGCTCGAAAATTC 59.846 50.000 0.00 0.00 0.00 2.17
6976 7468 1.693467 GAAAATTCGTTTCGGTGCCC 58.307 50.000 0.00 0.00 36.52 5.36
6987 7479 2.281761 GGTGCCCGAGCCCATATG 60.282 66.667 0.00 0.00 38.69 1.78
6988 7480 2.980233 GTGCCCGAGCCCATATGC 60.980 66.667 0.00 0.00 38.69 3.14
6989 7481 3.487626 TGCCCGAGCCCATATGCA 61.488 61.111 0.00 0.00 38.69 3.96
6990 7482 2.980233 GCCCGAGCCCATATGCAC 60.980 66.667 0.00 0.00 0.00 4.57
6991 7483 2.281761 CCCGAGCCCATATGCACC 60.282 66.667 0.00 0.00 0.00 5.01
6992 7484 2.281761 CCGAGCCCATATGCACCC 60.282 66.667 0.00 0.00 0.00 4.61
6993 7485 2.666190 CGAGCCCATATGCACCCG 60.666 66.667 0.00 0.00 0.00 5.28
6994 7486 2.828868 GAGCCCATATGCACCCGA 59.171 61.111 0.00 0.00 0.00 5.14
6995 7487 1.376466 GAGCCCATATGCACCCGAT 59.624 57.895 0.00 0.00 0.00 4.18
6996 7488 0.613260 GAGCCCATATGCACCCGATA 59.387 55.000 0.00 0.00 0.00 2.92
6997 7489 1.210478 GAGCCCATATGCACCCGATAT 59.790 52.381 0.00 0.00 0.00 1.63
6998 7490 1.210478 AGCCCATATGCACCCGATATC 59.790 52.381 0.00 0.00 0.00 1.63
6999 7491 1.747206 GCCCATATGCACCCGATATCC 60.747 57.143 0.00 0.00 0.00 2.59
7000 7492 1.839994 CCCATATGCACCCGATATCCT 59.160 52.381 0.00 0.00 0.00 3.24
7001 7493 2.420547 CCCATATGCACCCGATATCCTG 60.421 54.545 0.00 0.00 0.00 3.86
7002 7494 2.420547 CCATATGCACCCGATATCCTGG 60.421 54.545 0.00 0.71 0.00 4.45
7003 7495 2.024176 TATGCACCCGATATCCTGGT 57.976 50.000 5.88 5.88 0.00 4.00
7004 7496 0.687354 ATGCACCCGATATCCTGGTC 59.313 55.000 8.31 5.53 0.00 4.02
7005 7497 1.006102 GCACCCGATATCCTGGTCG 60.006 63.158 8.31 0.00 37.58 4.79
7006 7498 1.006102 CACCCGATATCCTGGTCGC 60.006 63.158 8.31 0.00 36.57 5.19
7007 7499 1.456892 ACCCGATATCCTGGTCGCA 60.457 57.895 5.88 0.00 36.57 5.10
7008 7500 1.006102 CCCGATATCCTGGTCGCAC 60.006 63.158 0.00 0.00 36.57 5.34
7009 7501 1.464376 CCCGATATCCTGGTCGCACT 61.464 60.000 0.00 0.00 36.57 4.40
7010 7502 0.389391 CCGATATCCTGGTCGCACTT 59.611 55.000 0.00 0.00 36.57 3.16
7011 7503 1.202533 CCGATATCCTGGTCGCACTTT 60.203 52.381 0.00 0.00 36.57 2.66
7012 7504 2.128035 CGATATCCTGGTCGCACTTTC 58.872 52.381 0.00 0.00 0.00 2.62
7013 7505 2.484889 GATATCCTGGTCGCACTTTCC 58.515 52.381 0.00 0.00 0.00 3.13
7014 7506 1.568504 TATCCTGGTCGCACTTTCCT 58.431 50.000 0.00 0.00 0.00 3.36
7015 7507 0.250513 ATCCTGGTCGCACTTTCCTC 59.749 55.000 0.00 0.00 0.00 3.71
7016 7508 0.832135 TCCTGGTCGCACTTTCCTCT 60.832 55.000 0.00 0.00 0.00 3.69
7017 7509 0.390472 CCTGGTCGCACTTTCCTCTC 60.390 60.000 0.00 0.00 0.00 3.20
7018 7510 0.734253 CTGGTCGCACTTTCCTCTCG 60.734 60.000 0.00 0.00 0.00 4.04
7019 7511 1.176619 TGGTCGCACTTTCCTCTCGA 61.177 55.000 0.00 0.00 0.00 4.04
7020 7512 0.456995 GGTCGCACTTTCCTCTCGAG 60.457 60.000 5.93 5.93 0.00 4.04
7021 7513 0.522180 GTCGCACTTTCCTCTCGAGA 59.478 55.000 15.70 15.70 0.00 4.04
7022 7514 1.133407 GTCGCACTTTCCTCTCGAGAT 59.867 52.381 17.03 0.00 0.00 2.75
7023 7515 1.402259 TCGCACTTTCCTCTCGAGATC 59.598 52.381 17.03 0.00 0.00 2.75
7024 7516 1.403679 CGCACTTTCCTCTCGAGATCT 59.596 52.381 17.03 0.00 0.00 2.75
7025 7517 2.159310 CGCACTTTCCTCTCGAGATCTT 60.159 50.000 17.03 0.00 0.00 2.40
7026 7518 3.443976 GCACTTTCCTCTCGAGATCTTC 58.556 50.000 17.03 0.00 0.00 2.87
7027 7519 3.119316 GCACTTTCCTCTCGAGATCTTCA 60.119 47.826 17.03 0.00 0.00 3.02
7028 7520 4.441356 GCACTTTCCTCTCGAGATCTTCAT 60.441 45.833 17.03 0.00 0.00 2.57
7029 7521 5.280945 CACTTTCCTCTCGAGATCTTCATC 58.719 45.833 17.03 0.00 0.00 2.92
7030 7522 4.340950 ACTTTCCTCTCGAGATCTTCATCC 59.659 45.833 17.03 0.00 0.00 3.51
7031 7523 3.874383 TCCTCTCGAGATCTTCATCCT 57.126 47.619 17.03 0.00 0.00 3.24
7032 7524 3.485394 TCCTCTCGAGATCTTCATCCTG 58.515 50.000 17.03 0.00 0.00 3.86
7033 7525 2.030007 CCTCTCGAGATCTTCATCCTGC 60.030 54.545 17.03 0.00 0.00 4.85
7034 7526 1.606189 TCTCGAGATCTTCATCCTGCG 59.394 52.381 12.08 0.00 0.00 5.18
7035 7527 0.031314 TCGAGATCTTCATCCTGCGC 59.969 55.000 0.00 0.00 0.00 6.09
7036 7528 0.249197 CGAGATCTTCATCCTGCGCA 60.249 55.000 10.98 10.98 0.00 6.09
7037 7529 1.500108 GAGATCTTCATCCTGCGCAG 58.500 55.000 30.52 30.52 0.00 5.18
7038 7530 0.829333 AGATCTTCATCCTGCGCAGT 59.171 50.000 33.75 15.85 0.00 4.40
7039 7531 2.034878 AGATCTTCATCCTGCGCAGTA 58.965 47.619 33.75 21.75 0.00 2.74
7040 7532 2.632028 AGATCTTCATCCTGCGCAGTAT 59.368 45.455 33.75 23.14 0.00 2.12
7041 7533 2.988010 TCTTCATCCTGCGCAGTATT 57.012 45.000 33.75 16.51 0.00 1.89
7042 7534 2.826428 TCTTCATCCTGCGCAGTATTC 58.174 47.619 33.75 0.00 0.00 1.75
7043 7535 2.432146 TCTTCATCCTGCGCAGTATTCT 59.568 45.455 33.75 12.05 0.00 2.40
7044 7536 2.988010 TCATCCTGCGCAGTATTCTT 57.012 45.000 33.75 10.47 0.00 2.52
7045 7537 4.099419 TCTTCATCCTGCGCAGTATTCTTA 59.901 41.667 33.75 13.17 0.00 2.10
7046 7538 3.717707 TCATCCTGCGCAGTATTCTTAC 58.282 45.455 33.75 0.00 0.00 2.34
7047 7539 2.203800 TCCTGCGCAGTATTCTTACG 57.796 50.000 33.75 16.41 33.32 3.18
7048 7540 1.475280 TCCTGCGCAGTATTCTTACGT 59.525 47.619 33.75 0.00 33.32 3.57
7049 7541 1.588404 CCTGCGCAGTATTCTTACGTG 59.412 52.381 33.75 11.76 33.32 4.49
7050 7542 2.259618 CTGCGCAGTATTCTTACGTGT 58.740 47.619 29.24 0.00 33.32 4.49
7051 7543 3.431856 CTGCGCAGTATTCTTACGTGTA 58.568 45.455 29.24 0.00 33.32 2.90
7052 7544 4.036567 TGCGCAGTATTCTTACGTGTAT 57.963 40.909 5.66 0.00 33.32 2.29
7053 7545 4.426416 TGCGCAGTATTCTTACGTGTATT 58.574 39.130 5.66 0.00 33.32 1.89
7054 7546 5.580661 TGCGCAGTATTCTTACGTGTATTA 58.419 37.500 5.66 0.00 33.32 0.98
7055 7547 6.210796 TGCGCAGTATTCTTACGTGTATTAT 58.789 36.000 5.66 0.00 33.32 1.28
7056 7548 6.143278 TGCGCAGTATTCTTACGTGTATTATG 59.857 38.462 5.66 0.00 33.32 1.90
7057 7549 6.143438 GCGCAGTATTCTTACGTGTATTATGT 59.857 38.462 0.30 0.00 33.32 2.29
7058 7550 7.490868 CGCAGTATTCTTACGTGTATTATGTG 58.509 38.462 0.00 0.00 33.32 3.21
7059 7551 7.166970 CGCAGTATTCTTACGTGTATTATGTGT 59.833 37.037 0.00 0.00 33.32 3.72
7060 7552 8.477709 GCAGTATTCTTACGTGTATTATGTGTC 58.522 37.037 0.00 0.00 33.32 3.67
7061 7553 8.679385 CAGTATTCTTACGTGTATTATGTGTCG 58.321 37.037 0.00 0.00 33.32 4.35
7062 7554 8.400947 AGTATTCTTACGTGTATTATGTGTCGT 58.599 33.333 0.00 0.00 33.32 4.34
7063 7555 9.650371 GTATTCTTACGTGTATTATGTGTCGTA 57.350 33.333 0.00 0.00 33.70 3.43
7065 7557 8.772306 TTCTTACGTGTATTATGTGTCGTATC 57.228 34.615 0.00 0.00 34.63 2.24
7066 7558 7.065283 TCTTACGTGTATTATGTGTCGTATCG 58.935 38.462 0.00 0.00 34.63 2.92
7067 7559 5.408204 ACGTGTATTATGTGTCGTATCGA 57.592 39.130 0.00 0.00 0.00 3.59
7068 7560 5.993891 ACGTGTATTATGTGTCGTATCGAT 58.006 37.500 2.16 2.16 38.42 3.59
7069 7561 5.849604 ACGTGTATTATGTGTCGTATCGATG 59.150 40.000 8.54 0.00 38.42 3.84
7070 7562 5.283012 CGTGTATTATGTGTCGTATCGATGG 59.717 44.000 8.54 0.00 38.42 3.51
7071 7563 6.376177 GTGTATTATGTGTCGTATCGATGGA 58.624 40.000 8.54 2.28 38.42 3.41
7072 7564 6.859508 GTGTATTATGTGTCGTATCGATGGAA 59.140 38.462 8.54 0.00 38.42 3.53
7073 7565 7.380333 GTGTATTATGTGTCGTATCGATGGAAA 59.620 37.037 8.54 0.00 38.42 3.13
7074 7566 7.921745 TGTATTATGTGTCGTATCGATGGAAAA 59.078 33.333 8.54 0.00 38.42 2.29
7075 7567 7.962964 ATTATGTGTCGTATCGATGGAAAAT 57.037 32.000 8.54 3.25 38.42 1.82
7076 7568 7.780008 TTATGTGTCGTATCGATGGAAAATT 57.220 32.000 8.54 0.00 38.42 1.82
7077 7569 5.712217 TGTGTCGTATCGATGGAAAATTC 57.288 39.130 8.54 0.00 38.42 2.17
7078 7570 5.172205 TGTGTCGTATCGATGGAAAATTCA 58.828 37.500 8.54 0.00 38.42 2.57
7079 7571 5.062934 TGTGTCGTATCGATGGAAAATTCAC 59.937 40.000 8.54 9.42 38.42 3.18
7080 7572 4.569162 TGTCGTATCGATGGAAAATTCACC 59.431 41.667 8.54 0.00 38.42 4.02
7081 7573 4.025145 GTCGTATCGATGGAAAATTCACCC 60.025 45.833 8.54 0.00 38.42 4.61
7082 7574 3.874543 CGTATCGATGGAAAATTCACCCA 59.125 43.478 8.54 0.00 0.00 4.51
7083 7575 4.024893 CGTATCGATGGAAAATTCACCCAG 60.025 45.833 8.54 0.00 32.90 4.45
7084 7576 2.091541 TCGATGGAAAATTCACCCAGC 58.908 47.619 0.00 0.00 32.90 4.85
7085 7577 2.566952 GATGGAAAATTCACCCAGCG 57.433 50.000 0.00 0.00 32.90 5.18
7086 7578 1.818674 GATGGAAAATTCACCCAGCGT 59.181 47.619 0.00 0.00 32.90 5.07
7087 7579 1.243902 TGGAAAATTCACCCAGCGTC 58.756 50.000 0.00 0.00 0.00 5.19
7088 7580 0.526211 GGAAAATTCACCCAGCGTCC 59.474 55.000 0.00 0.00 0.00 4.79
7089 7581 0.168128 GAAAATTCACCCAGCGTCCG 59.832 55.000 0.00 0.00 0.00 4.79
7090 7582 1.862602 AAAATTCACCCAGCGTCCGC 61.863 55.000 2.94 2.94 42.33 5.54
7091 7583 3.545124 AATTCACCCAGCGTCCGCA 62.545 57.895 14.70 0.00 44.88 5.69
7092 7584 2.819984 AATTCACCCAGCGTCCGCAT 62.820 55.000 14.70 0.00 44.88 4.73
7093 7585 2.819984 ATTCACCCAGCGTCCGCATT 62.820 55.000 14.70 0.00 44.88 3.56
7094 7586 3.055719 CACCCAGCGTCCGCATTT 61.056 61.111 14.70 0.00 44.88 2.32
7095 7587 1.743623 CACCCAGCGTCCGCATTTA 60.744 57.895 14.70 0.00 44.88 1.40
7096 7588 1.743995 ACCCAGCGTCCGCATTTAC 60.744 57.895 14.70 0.00 44.88 2.01
7097 7589 1.449601 CCCAGCGTCCGCATTTACT 60.450 57.895 14.70 0.00 44.88 2.24
7098 7590 1.705337 CCCAGCGTCCGCATTTACTG 61.705 60.000 14.70 2.04 44.88 2.74
7114 7606 7.050970 CATTTACTGCTAGTAGGTACCATCA 57.949 40.000 15.94 0.00 31.47 3.07
7115 7607 6.461110 TTTACTGCTAGTAGGTACCATCAC 57.539 41.667 15.94 8.89 31.47 3.06
7116 7608 2.950309 ACTGCTAGTAGGTACCATCACG 59.050 50.000 15.94 0.24 0.00 4.35
7117 7609 2.293677 CTGCTAGTAGGTACCATCACGG 59.706 54.545 15.94 8.40 42.50 4.94
7118 7610 1.000496 GCTAGTAGGTACCATCACGGC 60.000 57.143 15.94 13.64 39.03 5.68
7119 7611 1.612463 CTAGTAGGTACCATCACGGCC 59.388 57.143 15.94 0.00 39.03 6.13
7120 7612 1.047034 AGTAGGTACCATCACGGCCC 61.047 60.000 15.94 0.00 39.03 5.80
7121 7613 1.001888 TAGGTACCATCACGGCCCA 59.998 57.895 15.94 0.00 39.03 5.36
7122 7614 1.046472 TAGGTACCATCACGGCCCAG 61.046 60.000 15.94 0.00 39.03 4.45
7123 7615 2.363975 GGTACCATCACGGCCCAGA 61.364 63.158 7.15 0.00 39.03 3.86
7124 7616 1.696097 GGTACCATCACGGCCCAGAT 61.696 60.000 7.15 0.00 39.03 2.90
7125 7617 0.532862 GTACCATCACGGCCCAGATG 60.533 60.000 20.07 20.07 40.94 2.90
7126 7618 0.980754 TACCATCACGGCCCAGATGT 60.981 55.000 23.27 16.24 39.92 3.06
7127 7619 1.077501 CCATCACGGCCCAGATGTT 60.078 57.895 23.27 1.26 39.92 2.71
7128 7620 0.680921 CCATCACGGCCCAGATGTTT 60.681 55.000 23.27 0.00 39.92 2.83
7129 7621 0.734889 CATCACGGCCCAGATGTTTC 59.265 55.000 19.17 0.00 37.45 2.78
7130 7622 0.394352 ATCACGGCCCAGATGTTTCC 60.394 55.000 0.00 0.00 0.00 3.13
7131 7623 1.303236 CACGGCCCAGATGTTTCCA 60.303 57.895 0.00 0.00 0.00 3.53
7132 7624 0.893270 CACGGCCCAGATGTTTCCAA 60.893 55.000 0.00 0.00 0.00 3.53
7133 7625 0.893727 ACGGCCCAGATGTTTCCAAC 60.894 55.000 0.00 0.00 0.00 3.77
7134 7626 0.893270 CGGCCCAGATGTTTCCAACA 60.893 55.000 0.00 0.00 46.94 3.33
7135 7627 0.603065 GGCCCAGATGTTTCCAACAC 59.397 55.000 0.00 0.00 45.50 3.32
7136 7628 0.240945 GCCCAGATGTTTCCAACACG 59.759 55.000 0.00 0.00 45.50 4.49
7137 7629 0.881118 CCCAGATGTTTCCAACACGG 59.119 55.000 0.00 0.00 45.50 4.94
7138 7630 0.240945 CCAGATGTTTCCAACACGGC 59.759 55.000 0.00 0.00 45.50 5.68
7139 7631 0.240945 CAGATGTTTCCAACACGGCC 59.759 55.000 0.00 0.00 45.50 6.13
7140 7632 0.893727 AGATGTTTCCAACACGGCCC 60.894 55.000 0.00 0.00 45.50 5.80
7141 7633 1.152652 ATGTTTCCAACACGGCCCA 60.153 52.632 0.00 0.00 45.50 5.36
7142 7634 1.178534 ATGTTTCCAACACGGCCCAG 61.179 55.000 0.00 0.00 45.50 4.45
7143 7635 2.909965 TTTCCAACACGGCCCAGC 60.910 61.111 0.00 0.00 33.14 4.85
7144 7636 4.966787 TTCCAACACGGCCCAGCC 62.967 66.667 0.00 0.00 46.75 4.85
7154 7646 2.677875 GCCCAGCCACTTTCCTGG 60.678 66.667 0.00 0.00 46.49 4.45
7159 7651 2.118294 GCCACTTTCCTGGGCCTT 59.882 61.111 4.53 0.00 41.90 4.35
7160 7652 2.278330 GCCACTTTCCTGGGCCTTG 61.278 63.158 4.53 0.00 41.90 3.61
7161 7653 1.153756 CCACTTTCCTGGGCCTTGT 59.846 57.895 4.53 0.00 0.00 3.16
7162 7654 0.895559 CCACTTTCCTGGGCCTTGTC 60.896 60.000 4.53 0.00 0.00 3.18
7163 7655 1.073199 ACTTTCCTGGGCCTTGTCG 59.927 57.895 4.53 0.00 0.00 4.35
7164 7656 1.073199 CTTTCCTGGGCCTTGTCGT 59.927 57.895 4.53 0.00 0.00 4.34
7165 7657 1.228124 TTTCCTGGGCCTTGTCGTG 60.228 57.895 4.53 0.00 0.00 4.35
7166 7658 3.842925 TTCCTGGGCCTTGTCGTGC 62.843 63.158 4.53 0.00 0.00 5.34
7171 7663 3.723348 GGCCTTGTCGTGCCGTTC 61.723 66.667 0.00 0.00 38.00 3.95
7172 7664 2.665185 GCCTTGTCGTGCCGTTCT 60.665 61.111 0.00 0.00 0.00 3.01
7173 7665 2.954753 GCCTTGTCGTGCCGTTCTG 61.955 63.158 0.00 0.00 0.00 3.02
7174 7666 2.551270 CTTGTCGTGCCGTTCTGC 59.449 61.111 0.00 0.00 0.00 4.26
7175 7667 2.954753 CTTGTCGTGCCGTTCTGCC 61.955 63.158 0.00 0.00 0.00 4.85
7176 7668 4.980805 TGTCGTGCCGTTCTGCCC 62.981 66.667 0.00 0.00 0.00 5.36
7193 7685 3.414486 CCCCCGTCTGACAAAGTTT 57.586 52.632 8.73 0.00 0.00 2.66
7194 7686 1.687563 CCCCCGTCTGACAAAGTTTT 58.312 50.000 8.73 0.00 0.00 2.43
7195 7687 2.028876 CCCCCGTCTGACAAAGTTTTT 58.971 47.619 8.73 0.00 0.00 1.94
7196 7688 2.034179 CCCCCGTCTGACAAAGTTTTTC 59.966 50.000 8.73 0.00 0.00 2.29
7197 7689 2.034179 CCCCGTCTGACAAAGTTTTTCC 59.966 50.000 8.73 0.00 0.00 3.13
7198 7690 2.685897 CCCGTCTGACAAAGTTTTTCCA 59.314 45.455 8.73 0.00 0.00 3.53
7199 7691 3.129638 CCCGTCTGACAAAGTTTTTCCAA 59.870 43.478 8.73 0.00 0.00 3.53
7200 7692 4.381079 CCCGTCTGACAAAGTTTTTCCAAA 60.381 41.667 8.73 0.00 0.00 3.28
7201 7693 5.164954 CCGTCTGACAAAGTTTTTCCAAAA 58.835 37.500 8.73 0.00 0.00 2.44
7202 7694 5.288472 CCGTCTGACAAAGTTTTTCCAAAAG 59.712 40.000 8.73 0.00 0.00 2.27
7203 7695 5.288472 CGTCTGACAAAGTTTTTCCAAAAGG 59.712 40.000 8.73 0.00 0.00 3.11
7204 7696 6.394809 GTCTGACAAAGTTTTTCCAAAAGGA 58.605 36.000 2.24 0.00 0.00 3.36
7205 7697 6.871492 GTCTGACAAAGTTTTTCCAAAAGGAA 59.129 34.615 2.24 0.00 0.00 3.36
7206 7698 7.386573 GTCTGACAAAGTTTTTCCAAAAGGAAA 59.613 33.333 5.63 5.63 36.28 3.13
7207 7699 8.100164 TCTGACAAAGTTTTTCCAAAAGGAAAT 58.900 29.630 10.20 0.00 37.65 2.17
7208 7700 8.628630 TGACAAAGTTTTTCCAAAAGGAAATT 57.371 26.923 10.20 0.41 37.65 1.82
7209 7701 8.510505 TGACAAAGTTTTTCCAAAAGGAAATTG 58.489 29.630 10.20 12.85 37.65 2.32
7210 7702 8.628630 ACAAAGTTTTTCCAAAAGGAAATTGA 57.371 26.923 19.71 3.06 37.65 2.57
7211 7703 9.072375 ACAAAGTTTTTCCAAAAGGAAATTGAA 57.928 25.926 19.71 7.79 37.65 2.69
7212 7704 9.558648 CAAAGTTTTTCCAAAAGGAAATTGAAG 57.441 29.630 10.20 0.00 37.65 3.02
7213 7705 7.864108 AGTTTTTCCAAAAGGAAATTGAAGG 57.136 32.000 10.20 0.00 37.65 3.46
7214 7706 6.318648 AGTTTTTCCAAAAGGAAATTGAAGGC 59.681 34.615 10.20 0.00 37.65 4.35
7215 7707 5.628797 TTTCCAAAAGGAAATTGAAGGCT 57.371 34.783 5.63 0.00 33.60 4.58
7216 7708 4.605640 TCCAAAAGGAAATTGAAGGCTG 57.394 40.909 0.00 0.00 0.00 4.85
7217 7709 4.222336 TCCAAAAGGAAATTGAAGGCTGA 58.778 39.130 0.00 0.00 0.00 4.26
7218 7710 4.039124 TCCAAAAGGAAATTGAAGGCTGAC 59.961 41.667 0.00 0.00 0.00 3.51
7219 7711 4.039609 CCAAAAGGAAATTGAAGGCTGACT 59.960 41.667 0.00 0.00 0.00 3.41
7220 7712 4.861102 AAAGGAAATTGAAGGCTGACTG 57.139 40.909 0.00 0.00 0.00 3.51
7221 7713 2.165998 AGGAAATTGAAGGCTGACTGC 58.834 47.619 0.00 0.00 41.94 4.40
7222 7714 1.135575 GGAAATTGAAGGCTGACTGCG 60.136 52.381 0.00 0.00 44.05 5.18
7223 7715 1.537202 GAAATTGAAGGCTGACTGCGT 59.463 47.619 0.00 0.00 44.05 5.24
7224 7716 0.877071 AATTGAAGGCTGACTGCGTG 59.123 50.000 0.00 0.00 44.05 5.34
7225 7717 0.250467 ATTGAAGGCTGACTGCGTGT 60.250 50.000 0.00 0.00 44.05 4.49
7226 7718 1.159713 TTGAAGGCTGACTGCGTGTG 61.160 55.000 0.00 0.00 44.05 3.82
7227 7719 1.595382 GAAGGCTGACTGCGTGTGT 60.595 57.895 0.00 0.00 44.05 3.72
7228 7720 0.319555 GAAGGCTGACTGCGTGTGTA 60.320 55.000 0.00 0.00 44.05 2.90
7229 7721 0.321671 AAGGCTGACTGCGTGTGTAT 59.678 50.000 0.00 0.00 44.05 2.29
7230 7722 0.108615 AGGCTGACTGCGTGTGTATC 60.109 55.000 0.00 0.00 44.05 2.24
7231 7723 1.413767 GGCTGACTGCGTGTGTATCG 61.414 60.000 0.00 0.00 44.05 2.92
7232 7724 1.413767 GCTGACTGCGTGTGTATCGG 61.414 60.000 0.00 0.00 0.00 4.18
7233 7725 0.170339 CTGACTGCGTGTGTATCGGA 59.830 55.000 0.00 0.00 0.00 4.55
7234 7726 0.599060 TGACTGCGTGTGTATCGGAA 59.401 50.000 0.00 0.00 0.00 4.30
7235 7727 1.203758 TGACTGCGTGTGTATCGGAAT 59.796 47.619 0.00 0.00 0.00 3.01
7236 7728 2.424246 TGACTGCGTGTGTATCGGAATA 59.576 45.455 0.00 0.00 0.00 1.75
7237 7729 3.067601 TGACTGCGTGTGTATCGGAATAT 59.932 43.478 0.00 0.00 0.00 1.28
7238 7730 3.381045 ACTGCGTGTGTATCGGAATATG 58.619 45.455 0.00 0.00 0.00 1.78
7239 7731 2.131972 TGCGTGTGTATCGGAATATGC 58.868 47.619 0.00 0.00 0.00 3.14
7240 7732 1.459592 GCGTGTGTATCGGAATATGCC 59.540 52.381 0.00 0.00 0.00 4.40
7241 7733 2.066262 CGTGTGTATCGGAATATGCCC 58.934 52.381 0.00 0.00 0.00 5.36
7242 7734 2.423577 GTGTGTATCGGAATATGCCCC 58.576 52.381 0.00 0.00 0.00 5.80
7243 7735 2.038557 GTGTGTATCGGAATATGCCCCT 59.961 50.000 0.00 0.00 0.00 4.79
7244 7736 3.259876 GTGTGTATCGGAATATGCCCCTA 59.740 47.826 0.00 0.00 0.00 3.53
7245 7737 3.904965 TGTGTATCGGAATATGCCCCTAA 59.095 43.478 0.00 0.00 0.00 2.69
7246 7738 4.348461 TGTGTATCGGAATATGCCCCTAAA 59.652 41.667 0.00 0.00 0.00 1.85
7247 7739 4.694037 GTGTATCGGAATATGCCCCTAAAC 59.306 45.833 0.00 0.00 0.00 2.01
7248 7740 4.595781 TGTATCGGAATATGCCCCTAAACT 59.404 41.667 0.00 0.00 0.00 2.66
7249 7741 5.781306 TGTATCGGAATATGCCCCTAAACTA 59.219 40.000 0.00 0.00 0.00 2.24
7250 7742 4.884668 TCGGAATATGCCCCTAAACTAG 57.115 45.455 0.00 0.00 0.00 2.57
7251 7743 3.007614 TCGGAATATGCCCCTAAACTAGC 59.992 47.826 0.00 0.00 0.00 3.42
7252 7744 3.335579 GGAATATGCCCCTAAACTAGCG 58.664 50.000 0.00 0.00 0.00 4.26
7253 7745 3.244457 GGAATATGCCCCTAAACTAGCGT 60.244 47.826 0.00 0.00 0.00 5.07
7254 7746 3.679824 ATATGCCCCTAAACTAGCGTC 57.320 47.619 0.00 0.00 0.00 5.19
7255 7747 1.497161 ATGCCCCTAAACTAGCGTCT 58.503 50.000 0.00 0.00 0.00 4.18
7256 7748 1.272807 TGCCCCTAAACTAGCGTCTT 58.727 50.000 0.00 0.00 0.00 3.01
7257 7749 2.459644 TGCCCCTAAACTAGCGTCTTA 58.540 47.619 0.00 0.00 0.00 2.10
7258 7750 2.429610 TGCCCCTAAACTAGCGTCTTAG 59.570 50.000 0.00 0.00 0.00 2.18
7259 7751 2.223994 GCCCCTAAACTAGCGTCTTAGG 60.224 54.545 11.14 11.14 40.90 2.69
7264 7756 6.837471 CCTAAACTAGCGTCTTAGGGATAT 57.163 41.667 10.57 0.00 38.59 1.63
7265 7757 7.229581 CCTAAACTAGCGTCTTAGGGATATT 57.770 40.000 10.57 0.00 38.59 1.28
7266 7758 7.668492 CCTAAACTAGCGTCTTAGGGATATTT 58.332 38.462 10.57 0.00 38.59 1.40
7267 7759 8.148999 CCTAAACTAGCGTCTTAGGGATATTTT 58.851 37.037 10.57 0.00 38.59 1.82
7269 7761 8.883954 AAACTAGCGTCTTAGGGATATTTTAC 57.116 34.615 0.00 0.00 0.00 2.01
7270 7762 6.675987 ACTAGCGTCTTAGGGATATTTTACG 58.324 40.000 0.00 0.00 0.00 3.18
7271 7763 5.526506 AGCGTCTTAGGGATATTTTACGT 57.473 39.130 0.00 0.00 0.00 3.57
7272 7764 5.910614 AGCGTCTTAGGGATATTTTACGTT 58.089 37.500 0.00 0.00 0.00 3.99
7273 7765 6.343703 AGCGTCTTAGGGATATTTTACGTTT 58.656 36.000 0.00 0.00 0.00 3.60
7274 7766 6.820152 AGCGTCTTAGGGATATTTTACGTTTT 59.180 34.615 0.00 0.00 0.00 2.43
7275 7767 7.981225 AGCGTCTTAGGGATATTTTACGTTTTA 59.019 33.333 0.00 0.00 0.00 1.52
7276 7768 8.603181 GCGTCTTAGGGATATTTTACGTTTTAA 58.397 33.333 0.00 0.00 0.00 1.52
7277 7769 9.906111 CGTCTTAGGGATATTTTACGTTTTAAC 57.094 33.333 0.00 0.00 0.00 2.01
7282 7774 8.728337 AGGGATATTTTACGTTTTAACTCCTC 57.272 34.615 0.00 0.00 0.00 3.71
7283 7775 8.323567 AGGGATATTTTACGTTTTAACTCCTCA 58.676 33.333 0.00 0.00 0.00 3.86
7284 7776 8.949177 GGGATATTTTACGTTTTAACTCCTCAA 58.051 33.333 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.821061 CTTCCGAGACTGGTGGCAGT 61.821 60.000 0.00 0.00 38.26 4.40
31 32 1.821332 GCCTGGCATTCCTTCCGAG 60.821 63.158 15.17 0.00 0.00 4.63
192 219 0.390340 GCACAGATGTTCCTCGCTCA 60.390 55.000 0.00 0.00 0.00 4.26
193 220 0.108424 AGCACAGATGTTCCTCGCTC 60.108 55.000 0.00 0.00 0.00 5.03
194 221 0.322975 AAGCACAGATGTTCCTCGCT 59.677 50.000 0.00 0.00 0.00 4.93
233 265 2.777692 GAGAGGGAGAGGAGAGAGAGAA 59.222 54.545 0.00 0.00 0.00 2.87
235 267 1.070758 CGAGAGGGAGAGGAGAGAGAG 59.929 61.905 0.00 0.00 0.00 3.20
236 268 1.128200 CGAGAGGGAGAGGAGAGAGA 58.872 60.000 0.00 0.00 0.00 3.10
237 269 3.706055 CGAGAGGGAGAGGAGAGAG 57.294 63.158 0.00 0.00 0.00 3.20
683 715 4.758251 CGCATGAGGCACCCGACA 62.758 66.667 0.00 0.00 45.17 4.35
690 722 4.720902 CCACCACCGCATGAGGCA 62.721 66.667 16.26 0.00 45.17 4.75
852 884 1.298339 GAGCACCAAACACACACGC 60.298 57.895 0.00 0.00 0.00 5.34
857 889 0.179020 CTCAGGGAGCACCAAACACA 60.179 55.000 1.58 0.00 43.89 3.72
918 950 3.554692 CACACCTCCGAATCGCGC 61.555 66.667 0.00 0.00 39.11 6.86
954 986 2.266055 CCCCTCGCGAAAAGAGCT 59.734 61.111 11.33 0.00 34.56 4.09
966 998 4.179599 CTCCCCCTCCTCCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
969 1001 4.825679 CACCTCCCCCTCCTCCCC 62.826 77.778 0.00 0.00 0.00 4.81
970 1002 4.825679 CCACCTCCCCCTCCTCCC 62.826 77.778 0.00 0.00 0.00 4.30
971 1003 4.026357 ACCACCTCCCCCTCCTCC 62.026 72.222 0.00 0.00 0.00 4.30
972 1004 2.689034 CACCACCTCCCCCTCCTC 60.689 72.222 0.00 0.00 0.00 3.71
973 1005 4.354943 CCACCACCTCCCCCTCCT 62.355 72.222 0.00 0.00 0.00 3.69
974 1006 4.677151 ACCACCACCTCCCCCTCC 62.677 72.222 0.00 0.00 0.00 4.30
1376 1426 2.685106 AGAGACACTGTGGAAGAGGA 57.315 50.000 13.09 0.00 0.00 3.71
1393 1447 6.600822 GGAATCTGAATCTGAACATCCAAAGA 59.399 38.462 11.97 0.00 0.00 2.52
1433 1488 5.514204 CGAACTATAACCGACAACCAACTAG 59.486 44.000 0.00 0.00 0.00 2.57
1497 1552 2.882137 ACCGAAACATCCAAAACGACAT 59.118 40.909 0.00 0.00 0.00 3.06
1526 1581 1.556564 CGACCAACTACGGCATACAG 58.443 55.000 0.00 0.00 0.00 2.74
1554 1609 9.469807 CTCAGCATTATAAGAATCTAACGAACT 57.530 33.333 0.00 0.00 0.00 3.01
1610 1665 2.310779 TGTAGTTCACTCAGCTCCCT 57.689 50.000 0.00 0.00 0.00 4.20
1848 1903 2.292267 GCATCAGACCGAAACATCCAT 58.708 47.619 0.00 0.00 0.00 3.41
1862 1917 3.079578 AGAACATCCACAACTGCATCAG 58.920 45.455 0.00 0.00 37.52 2.90
1873 1928 3.601443 ACAGTCAGCTAGAACATCCAC 57.399 47.619 0.00 0.00 0.00 4.02
1959 2015 3.007506 TCACTCAACTCTCCCGCAATTTA 59.992 43.478 0.00 0.00 0.00 1.40
1967 2023 4.021016 ACACATAGTTCACTCAACTCTCCC 60.021 45.833 0.00 0.00 42.07 4.30
1996 2052 4.128580 TGCCCAGCTGCACTAGTA 57.871 55.556 8.66 0.00 36.04 1.82
2083 2139 7.201316 GCTATTTCACGATTAATGCGTTTTGTT 60.201 33.333 0.00 0.63 40.44 2.83
2091 2147 5.007626 TCACCAGCTATTTCACGATTAATGC 59.992 40.000 0.00 0.00 0.00 3.56
2109 2165 6.007936 TCAATGTTCGGTAAAATTCACCAG 57.992 37.500 9.25 3.52 35.67 4.00
2312 2369 9.571810 TGCATCATTCTCATTAAATTGTTACAC 57.428 29.630 0.00 0.00 0.00 2.90
2378 2435 1.469308 GAGTCAGGTAGGTGAGTGACG 59.531 57.143 0.00 0.00 43.38 4.35
2559 2616 7.144722 TGTTTGTAAGAAATAGATGCCACTG 57.855 36.000 0.00 0.00 0.00 3.66
2647 2705 7.972832 ACAAGCCTAACGTAACTAACTAGATTC 59.027 37.037 0.00 0.00 0.00 2.52
2662 2720 2.690778 GGCCAGCACAAGCCTAACG 61.691 63.158 0.00 0.00 46.14 3.18
2699 2757 3.935203 CGCTAGGCCCATATGATAAACAG 59.065 47.826 3.65 0.00 0.00 3.16
2780 2841 9.802039 TCAACTAAGGACTGTTTGGTATTAAAT 57.198 29.630 0.00 0.00 0.00 1.40
2928 2989 5.129368 ACAAACACAGGGCATATATCCTT 57.871 39.130 0.00 0.00 0.00 3.36
2941 3004 4.759693 TCCAAGGCATAAGTACAAACACAG 59.240 41.667 0.00 0.00 0.00 3.66
3052 3115 3.425162 AGGGATTCACTGACAAAGGTC 57.575 47.619 0.00 0.00 44.57 3.85
3070 3162 3.709141 CTCTTAAGGAGAAGGGGAGAAGG 59.291 52.174 1.85 0.00 44.45 3.46
3290 3391 3.007831 TCACACATCAGTTGCTGGTATCA 59.992 43.478 0.00 0.00 31.51 2.15
3307 3408 2.297033 ACACCAGAATGCCATTTCACAC 59.703 45.455 0.00 0.00 31.97 3.82
3333 3434 9.826574 TTACCAACTTAATCTTGCTTACGATAT 57.173 29.630 0.00 0.00 0.00 1.63
3342 3443 9.678941 GGCTATTAATTACCAACTTAATCTTGC 57.321 33.333 0.00 0.00 31.71 4.01
3400 3501 0.951558 GAATGGCAGTGTTGGACGTT 59.048 50.000 0.00 0.00 0.00 3.99
3401 3502 0.108585 AGAATGGCAGTGTTGGACGT 59.891 50.000 0.00 0.00 0.00 4.34
3402 3503 1.238439 AAGAATGGCAGTGTTGGACG 58.762 50.000 0.00 0.00 0.00 4.79
3436 3538 1.471684 GGCTCAACAGAAATGCTCCAG 59.528 52.381 0.00 0.00 0.00 3.86
3492 3594 4.408182 AGCAAGTAGTAATGCGAGGATT 57.592 40.909 4.12 0.00 46.98 3.01
3555 3657 2.942376 CAAGTTGCTGTGGTTACTCACA 59.058 45.455 6.52 6.52 44.36 3.58
3583 3685 7.524717 AAGTAACCGAAGTAAACCTACAGTA 57.475 36.000 0.00 0.00 0.00 2.74
3584 3686 6.410942 AAGTAACCGAAGTAAACCTACAGT 57.589 37.500 0.00 0.00 0.00 3.55
3585 3687 7.820648 TCTAAGTAACCGAAGTAAACCTACAG 58.179 38.462 0.00 0.00 0.00 2.74
3620 3722 9.922305 GCAGACACAAATAGATTAGTAAATCAC 57.078 33.333 1.35 0.00 43.44 3.06
3621 3723 9.109393 GGCAGACACAAATAGATTAGTAAATCA 57.891 33.333 1.35 0.00 43.44 2.57
3622 3724 9.109393 TGGCAGACACAAATAGATTAGTAAATC 57.891 33.333 0.00 0.00 41.65 2.17
3623 3725 9.113838 CTGGCAGACACAAATAGATTAGTAAAT 57.886 33.333 9.42 0.00 0.00 1.40
3624 3726 7.065803 GCTGGCAGACACAAATAGATTAGTAAA 59.934 37.037 20.86 0.00 0.00 2.01
3625 3727 6.538742 GCTGGCAGACACAAATAGATTAGTAA 59.461 38.462 20.86 0.00 0.00 2.24
3626 3728 6.049149 GCTGGCAGACACAAATAGATTAGTA 58.951 40.000 20.86 0.00 0.00 1.82
3627 3729 4.878397 GCTGGCAGACACAAATAGATTAGT 59.122 41.667 20.86 0.00 0.00 2.24
3628 3730 5.121811 AGCTGGCAGACACAAATAGATTAG 58.878 41.667 20.86 0.00 0.00 1.73
3629 3731 5.102953 AGCTGGCAGACACAAATAGATTA 57.897 39.130 20.86 0.00 0.00 1.75
3630 3732 3.960571 AGCTGGCAGACACAAATAGATT 58.039 40.909 20.86 0.00 0.00 2.40
3631 3733 3.641434 AGCTGGCAGACACAAATAGAT 57.359 42.857 20.86 0.00 0.00 1.98
3632 3734 3.423539 AAGCTGGCAGACACAAATAGA 57.576 42.857 20.86 0.00 0.00 1.98
3633 3735 4.232221 CAAAAGCTGGCAGACACAAATAG 58.768 43.478 20.86 0.00 0.00 1.73
3634 3736 3.636300 ACAAAAGCTGGCAGACACAAATA 59.364 39.130 20.86 0.00 0.00 1.40
3635 3737 2.431782 ACAAAAGCTGGCAGACACAAAT 59.568 40.909 20.86 0.00 0.00 2.32
3722 3825 1.003812 TGTATACCCACAAGGCCACAC 59.996 52.381 5.01 0.00 40.58 3.82
3783 3886 9.496873 TGTATTTTAAGTTGTAGCACATGTACT 57.503 29.630 3.59 3.59 0.00 2.73
3834 3937 8.204160 TCTGTTCATCAACTATAATCCGATGTT 58.796 33.333 0.00 0.00 35.91 2.71
3979 4184 0.105039 CAAGTCTGAGGTATCCCCGC 59.895 60.000 0.00 0.00 38.74 6.13
4067 4273 5.807011 CCAGGCAATGAATAACAGTTTTAGC 59.193 40.000 0.00 0.00 0.00 3.09
4088 4294 2.031333 GCTGACTTTTCTGCTGTTCCAG 60.031 50.000 0.00 0.00 42.07 3.86
4230 4436 4.759693 TCACTGAATCCAAACTTGCGTAAT 59.240 37.500 0.00 0.00 0.00 1.89
4233 4439 2.571212 TCACTGAATCCAAACTTGCGT 58.429 42.857 0.00 0.00 0.00 5.24
4347 4553 1.598130 AGGTTTCACAGGCGCAGTC 60.598 57.895 10.83 0.00 0.00 3.51
4500 4706 7.782897 ATAGAATACGGAGGAGAATCATTGA 57.217 36.000 0.00 0.00 36.25 2.57
4516 4722 6.094048 TCAACTTCTGCCTGCAAATAGAATAC 59.906 38.462 6.64 0.00 0.00 1.89
4659 4865 6.026947 ACTGGTCAGTACATACTTCTGAAC 57.973 41.667 1.24 0.00 43.60 3.18
5216 5423 4.437930 GCTGGCAAGTAATGTCTGATGAAC 60.438 45.833 0.00 0.00 34.78 3.18
5254 5461 5.100259 GCTAAGCTGTTTCTGTACGTATCA 58.900 41.667 0.00 0.00 0.00 2.15
5260 5467 7.201565 CCAAATCTAGCTAAGCTGTTTCTGTAC 60.202 40.741 0.00 0.00 40.10 2.90
5271 5478 5.235401 GCAAGTACTCCAAATCTAGCTAAGC 59.765 44.000 0.00 0.00 0.00 3.09
5296 5503 8.315220 TGATCATATGATGCATAGTGACCTAT 57.685 34.615 22.86 0.00 34.37 2.57
5302 5509 8.263940 TGACAATGATCATATGATGCATAGTG 57.736 34.615 22.86 19.21 34.37 2.74
5363 5570 6.765989 TCTGTATTCATGCCATTTACCACTAC 59.234 38.462 0.00 0.00 0.00 2.73
5418 5625 7.307219 GCCAACACTACTAGTTAAACTTCTGTG 60.307 40.741 0.00 0.00 0.00 3.66
5420 5627 6.929606 AGCCAACACTACTAGTTAAACTTCTG 59.070 38.462 0.00 0.00 0.00 3.02
5533 5740 1.879380 TGGTAGATTGGCGCATATTGC 59.121 47.619 10.83 0.00 40.69 3.56
5534 5741 4.566545 TTTGGTAGATTGGCGCATATTG 57.433 40.909 10.83 0.00 0.00 1.90
5654 6040 4.687219 GCAACTGGCCACTATAAGGAGAAT 60.687 45.833 0.00 0.00 36.11 2.40
5657 6043 2.565841 GCAACTGGCCACTATAAGGAG 58.434 52.381 0.00 0.00 36.11 3.69
5670 6056 0.317770 AACAAACATCGCGCAACTGG 60.318 50.000 8.75 0.00 0.00 4.00
5676 6062 3.117434 ACATTAGAACAAACATCGCGC 57.883 42.857 0.00 0.00 0.00 6.86
5721 6107 5.941733 TGATGTCAAATGACCTGAAATTCG 58.058 37.500 10.83 0.00 44.15 3.34
5855 6241 3.283684 TTGTGCTCGCCGTTTGGG 61.284 61.111 0.00 0.00 39.58 4.12
5856 6242 2.051345 GTTGTGCTCGCCGTTTGG 60.051 61.111 0.00 0.00 38.77 3.28
5857 6243 2.051345 GGTTGTGCTCGCCGTTTG 60.051 61.111 0.00 0.00 0.00 2.93
5858 6244 1.822186 AAGGTTGTGCTCGCCGTTT 60.822 52.632 0.00 0.00 0.00 3.60
5859 6245 2.203153 AAGGTTGTGCTCGCCGTT 60.203 55.556 0.00 0.00 0.00 4.44
5860 6246 2.972505 CAAGGTTGTGCTCGCCGT 60.973 61.111 0.00 0.00 0.00 5.68
5861 6247 2.972505 ACAAGGTTGTGCTCGCCG 60.973 61.111 0.00 0.00 40.49 6.46
5869 6255 1.152756 GCCCACTCCACAAGGTTGT 60.153 57.895 0.00 0.00 43.36 3.32
5870 6256 2.260869 CGCCCACTCCACAAGGTTG 61.261 63.158 0.00 0.00 35.89 3.77
5871 6257 2.113139 CGCCCACTCCACAAGGTT 59.887 61.111 0.00 0.00 35.89 3.50
5872 6258 4.643387 GCGCCCACTCCACAAGGT 62.643 66.667 0.00 0.00 35.89 3.50
5999 6385 4.649705 TTGGGGTCCCGGCTCAGA 62.650 66.667 0.48 0.00 39.42 3.27
6209 6595 0.463204 ACATGCTCCTCATCGACTGG 59.537 55.000 0.00 0.00 31.79 4.00
6213 6599 1.767759 TCAGACATGCTCCTCATCGA 58.232 50.000 0.00 0.00 31.79 3.59
6304 6690 2.947652 TCTAGGTTCGACCAGGATTACG 59.052 50.000 0.00 0.00 41.95 3.18
6372 6758 1.901654 ATGTTAACCCGCGGCACCTA 61.902 55.000 22.85 4.51 0.00 3.08
6386 6772 4.820284 TTCATGTCGCACAACAATGTTA 57.180 36.364 0.00 0.00 37.82 2.41
6426 6812 5.863965 TCTTCACATGTCAAATCTACACCA 58.136 37.500 0.00 0.00 0.00 4.17
6427 6813 6.650807 TCTTCTTCACATGTCAAATCTACACC 59.349 38.462 0.00 0.00 0.00 4.16
6482 6895 4.336713 GCATCCAGTTGAGATTAACCTTCC 59.663 45.833 0.00 0.00 0.00 3.46
6569 6992 2.616842 ACTGTTTCTTAACCAAGTGCCG 59.383 45.455 0.00 0.00 33.15 5.69
6582 7005 1.143684 AGTGGCACATGGACTGTTTCT 59.856 47.619 21.41 0.00 44.52 2.52
6663 7090 5.124617 CAGAAAAATGCCTCCTCTCCTAAAC 59.875 44.000 0.00 0.00 0.00 2.01
6681 7108 1.881973 AGCTCATTTGCTCGCAGAAAA 59.118 42.857 0.00 0.00 39.34 2.29
6694 7152 1.952296 GGAAATGGCATCGAGCTCATT 59.048 47.619 15.40 2.22 42.23 2.57
6706 7164 0.179153 GAAGCAAGCGAGGAAATGGC 60.179 55.000 0.00 0.00 0.00 4.40
6731 7189 3.139397 AGGTCCTATCCTACCTCTCTGTG 59.861 52.174 0.00 0.00 42.60 3.66
6781 7265 6.267928 GGCTACCCATTCTCTTCTTATAGACA 59.732 42.308 0.00 0.00 0.00 3.41
6799 7283 0.463116 CCACGGTACAATGGCTACCC 60.463 60.000 1.96 0.00 31.32 3.69
6800 7284 0.251073 ACCACGGTACAATGGCTACC 59.749 55.000 13.22 0.00 37.73 3.18
6801 7285 1.365699 CACCACGGTACAATGGCTAC 58.634 55.000 13.22 0.00 37.73 3.58
6876 7368 2.449450 CCGTCCATCCCTAACCCCC 61.449 68.421 0.00 0.00 0.00 5.40
6881 7373 0.539986 GCTTCACCGTCCATCCCTAA 59.460 55.000 0.00 0.00 0.00 2.69
6906 7398 2.280628 GCTAATCAGGGAGGAACGTTG 58.719 52.381 5.00 0.00 0.00 4.10
6930 7422 2.988010 AGAGCCGTGCAATGATAGAA 57.012 45.000 0.00 0.00 0.00 2.10
6939 7431 2.413351 GAGCGATAGAGCCGTGCA 59.587 61.111 0.00 0.00 38.01 4.57
6957 7449 1.693467 GGGCACCGAAACGAATTTTC 58.307 50.000 0.00 0.00 40.86 2.29
6958 7450 3.877874 GGGCACCGAAACGAATTTT 57.122 47.368 0.00 0.00 40.86 1.82
6971 7463 2.980233 GCATATGGGCTCGGGCAC 60.980 66.667 10.74 5.84 43.28 5.01
6972 7464 3.487626 TGCATATGGGCTCGGGCA 61.488 61.111 10.74 0.00 40.87 5.36
6973 7465 2.980233 GTGCATATGGGCTCGGGC 60.980 66.667 0.00 0.00 37.82 6.13
6974 7466 2.281761 GGTGCATATGGGCTCGGG 60.282 66.667 4.56 0.00 34.04 5.14
6975 7467 2.281761 GGGTGCATATGGGCTCGG 60.282 66.667 4.56 0.00 34.04 4.63
6976 7468 2.454832 ATCGGGTGCATATGGGCTCG 62.455 60.000 4.56 0.00 34.04 5.03
6977 7469 0.613260 TATCGGGTGCATATGGGCTC 59.387 55.000 4.56 0.00 34.04 4.70
6978 7470 1.210478 GATATCGGGTGCATATGGGCT 59.790 52.381 4.56 0.00 34.04 5.19
6979 7471 1.668419 GATATCGGGTGCATATGGGC 58.332 55.000 4.56 0.00 0.00 5.36
6980 7472 1.839994 AGGATATCGGGTGCATATGGG 59.160 52.381 4.56 0.00 0.00 4.00
6981 7473 2.420547 CCAGGATATCGGGTGCATATGG 60.421 54.545 4.56 0.00 0.00 2.74
6982 7474 2.237143 ACCAGGATATCGGGTGCATATG 59.763 50.000 14.86 0.00 42.37 1.78
6983 7475 2.501723 GACCAGGATATCGGGTGCATAT 59.498 50.000 19.15 0.00 43.99 1.78
6984 7476 1.899814 GACCAGGATATCGGGTGCATA 59.100 52.381 19.15 0.00 43.99 3.14
6985 7477 0.687354 GACCAGGATATCGGGTGCAT 59.313 55.000 19.15 0.00 43.99 3.96
6986 7478 1.744320 CGACCAGGATATCGGGTGCA 61.744 60.000 19.15 0.00 43.99 4.57
6987 7479 1.006102 CGACCAGGATATCGGGTGC 60.006 63.158 19.15 11.29 43.99 5.01
6988 7480 1.006102 GCGACCAGGATATCGGGTG 60.006 63.158 19.15 13.18 43.99 4.61
6989 7481 1.456892 TGCGACCAGGATATCGGGT 60.457 57.895 15.38 15.38 46.62 5.28
6990 7482 1.006102 GTGCGACCAGGATATCGGG 60.006 63.158 9.79 9.79 38.78 5.14
6991 7483 0.389391 AAGTGCGACCAGGATATCGG 59.611 55.000 0.00 0.00 38.78 4.18
6992 7484 2.128035 GAAAGTGCGACCAGGATATCG 58.872 52.381 0.00 0.00 41.32 2.92
6993 7485 2.103263 AGGAAAGTGCGACCAGGATATC 59.897 50.000 0.00 0.00 0.00 1.63
6994 7486 2.103263 GAGGAAAGTGCGACCAGGATAT 59.897 50.000 0.00 0.00 0.00 1.63
6995 7487 1.480954 GAGGAAAGTGCGACCAGGATA 59.519 52.381 0.00 0.00 0.00 2.59
6996 7488 0.250513 GAGGAAAGTGCGACCAGGAT 59.749 55.000 0.00 0.00 0.00 3.24
6997 7489 0.832135 AGAGGAAAGTGCGACCAGGA 60.832 55.000 0.00 0.00 0.00 3.86
6998 7490 0.390472 GAGAGGAAAGTGCGACCAGG 60.390 60.000 0.00 0.00 0.00 4.45
6999 7491 0.734253 CGAGAGGAAAGTGCGACCAG 60.734 60.000 0.00 0.00 0.00 4.00
7000 7492 1.176619 TCGAGAGGAAAGTGCGACCA 61.177 55.000 0.00 0.00 0.00 4.02
7001 7493 0.456995 CTCGAGAGGAAAGTGCGACC 60.457 60.000 6.58 0.00 0.00 4.79
7002 7494 0.522180 TCTCGAGAGGAAAGTGCGAC 59.478 55.000 12.08 0.00 0.00 5.19
7003 7495 1.402259 GATCTCGAGAGGAAAGTGCGA 59.598 52.381 21.52 0.00 0.00 5.10
7004 7496 1.403679 AGATCTCGAGAGGAAAGTGCG 59.596 52.381 21.52 0.00 0.00 5.34
7005 7497 3.119316 TGAAGATCTCGAGAGGAAAGTGC 60.119 47.826 21.52 5.31 0.00 4.40
7006 7498 4.710423 TGAAGATCTCGAGAGGAAAGTG 57.290 45.455 21.52 0.00 0.00 3.16
7007 7499 4.340950 GGATGAAGATCTCGAGAGGAAAGT 59.659 45.833 21.52 1.99 0.00 2.66
7008 7500 4.584325 AGGATGAAGATCTCGAGAGGAAAG 59.416 45.833 21.52 0.00 0.00 2.62
7009 7501 4.340666 CAGGATGAAGATCTCGAGAGGAAA 59.659 45.833 21.52 5.72 39.69 3.13
7010 7502 3.888323 CAGGATGAAGATCTCGAGAGGAA 59.112 47.826 21.52 4.99 39.69 3.36
7011 7503 3.485394 CAGGATGAAGATCTCGAGAGGA 58.515 50.000 21.52 0.00 39.69 3.71
7012 7504 2.030007 GCAGGATGAAGATCTCGAGAGG 60.030 54.545 21.52 0.00 39.69 3.69
7013 7505 2.350676 CGCAGGATGAAGATCTCGAGAG 60.351 54.545 21.52 3.99 39.69 3.20
7014 7506 1.606189 CGCAGGATGAAGATCTCGAGA 59.394 52.381 19.19 19.19 39.69 4.04
7015 7507 1.929926 GCGCAGGATGAAGATCTCGAG 60.930 57.143 5.93 5.93 39.69 4.04
7016 7508 0.031314 GCGCAGGATGAAGATCTCGA 59.969 55.000 0.30 0.00 39.69 4.04
7017 7509 0.249197 TGCGCAGGATGAAGATCTCG 60.249 55.000 5.66 0.00 39.69 4.04
7018 7510 1.202510 ACTGCGCAGGATGAAGATCTC 60.203 52.381 38.27 0.00 39.69 2.75
7019 7511 0.829333 ACTGCGCAGGATGAAGATCT 59.171 50.000 38.27 13.11 39.69 2.75
7020 7512 2.515926 TACTGCGCAGGATGAAGATC 57.484 50.000 38.27 0.00 39.69 2.75
7021 7513 3.070734 AGAATACTGCGCAGGATGAAGAT 59.929 43.478 35.00 19.64 39.69 2.40
7022 7514 2.432146 AGAATACTGCGCAGGATGAAGA 59.568 45.455 35.00 13.60 39.69 2.87
7023 7515 2.831333 AGAATACTGCGCAGGATGAAG 58.169 47.619 35.00 12.66 39.69 3.02
7024 7516 2.988010 AGAATACTGCGCAGGATGAA 57.012 45.000 35.00 17.26 39.69 2.57
7025 7517 2.988010 AAGAATACTGCGCAGGATGA 57.012 45.000 35.00 19.64 39.69 2.92
7026 7518 2.472861 CGTAAGAATACTGCGCAGGATG 59.527 50.000 35.00 17.80 43.02 3.51
7027 7519 2.100916 ACGTAAGAATACTGCGCAGGAT 59.899 45.455 38.27 34.29 43.62 3.24
7028 7520 1.475280 ACGTAAGAATACTGCGCAGGA 59.525 47.619 38.27 33.61 43.62 3.86
7029 7521 1.588404 CACGTAAGAATACTGCGCAGG 59.412 52.381 38.27 21.77 43.62 4.85
7030 7522 2.259618 ACACGTAAGAATACTGCGCAG 58.740 47.619 34.89 34.89 43.62 5.18
7031 7523 2.357327 ACACGTAAGAATACTGCGCA 57.643 45.000 10.98 10.98 43.62 6.09
7032 7524 6.143438 ACATAATACACGTAAGAATACTGCGC 59.857 38.462 0.00 0.00 43.62 6.09
7033 7525 7.166970 ACACATAATACACGTAAGAATACTGCG 59.833 37.037 0.00 0.00 43.62 5.18
7034 7526 8.348983 ACACATAATACACGTAAGAATACTGC 57.651 34.615 0.00 0.00 43.62 4.40
7035 7527 8.679385 CGACACATAATACACGTAAGAATACTG 58.321 37.037 0.00 0.00 43.62 2.74
7036 7528 8.400947 ACGACACATAATACACGTAAGAATACT 58.599 33.333 0.00 0.00 43.62 2.12
7037 7529 8.552469 ACGACACATAATACACGTAAGAATAC 57.448 34.615 0.00 0.00 43.62 1.89
7039 7531 9.390795 GATACGACACATAATACACGTAAGAAT 57.609 33.333 0.00 0.00 39.08 2.40
7040 7532 7.583762 CGATACGACACATAATACACGTAAGAA 59.416 37.037 0.00 0.00 39.08 2.52
7041 7533 7.042791 TCGATACGACACATAATACACGTAAGA 60.043 37.037 0.00 0.00 39.08 2.10
7042 7534 7.065283 TCGATACGACACATAATACACGTAAG 58.935 38.462 0.00 0.00 39.08 2.34
7043 7535 6.942891 TCGATACGACACATAATACACGTAA 58.057 36.000 0.00 0.00 39.08 3.18
7044 7536 6.523676 TCGATACGACACATAATACACGTA 57.476 37.500 0.00 0.00 39.71 3.57
7045 7537 5.408204 TCGATACGACACATAATACACGT 57.592 39.130 0.00 0.00 37.68 4.49
7046 7538 5.283012 CCATCGATACGACACATAATACACG 59.717 44.000 0.00 0.00 39.18 4.49
7047 7539 6.376177 TCCATCGATACGACACATAATACAC 58.624 40.000 0.00 0.00 39.18 2.90
7048 7540 6.563222 TCCATCGATACGACACATAATACA 57.437 37.500 0.00 0.00 39.18 2.29
7049 7541 7.862741 TTTCCATCGATACGACACATAATAC 57.137 36.000 0.00 0.00 39.18 1.89
7050 7542 9.483916 AATTTTCCATCGATACGACACATAATA 57.516 29.630 0.00 0.00 39.18 0.98
7051 7543 7.962964 ATTTTCCATCGATACGACACATAAT 57.037 32.000 0.00 0.00 39.18 1.28
7052 7544 7.492994 TGAATTTTCCATCGATACGACACATAA 59.507 33.333 0.00 0.00 39.18 1.90
7053 7545 6.981559 TGAATTTTCCATCGATACGACACATA 59.018 34.615 0.00 0.00 39.18 2.29
7054 7546 5.815222 TGAATTTTCCATCGATACGACACAT 59.185 36.000 0.00 0.00 39.18 3.21
7055 7547 5.062934 GTGAATTTTCCATCGATACGACACA 59.937 40.000 0.00 0.00 39.18 3.72
7056 7548 5.490213 GTGAATTTTCCATCGATACGACAC 58.510 41.667 0.00 0.00 39.18 3.67
7057 7549 4.569162 GGTGAATTTTCCATCGATACGACA 59.431 41.667 0.00 0.00 39.18 4.35
7058 7550 4.025145 GGGTGAATTTTCCATCGATACGAC 60.025 45.833 0.00 0.00 39.18 4.34
7059 7551 4.124238 GGGTGAATTTTCCATCGATACGA 58.876 43.478 0.00 0.00 41.13 3.43
7060 7552 3.874543 TGGGTGAATTTTCCATCGATACG 59.125 43.478 0.00 0.00 0.00 3.06
7061 7553 4.261197 GCTGGGTGAATTTTCCATCGATAC 60.261 45.833 0.00 0.00 0.00 2.24
7062 7554 3.882888 GCTGGGTGAATTTTCCATCGATA 59.117 43.478 0.00 0.00 0.00 2.92
7063 7555 2.689983 GCTGGGTGAATTTTCCATCGAT 59.310 45.455 0.00 0.00 0.00 3.59
7064 7556 2.091541 GCTGGGTGAATTTTCCATCGA 58.908 47.619 0.00 0.00 0.00 3.59
7065 7557 1.202177 CGCTGGGTGAATTTTCCATCG 60.202 52.381 5.13 5.13 34.63 3.84
7066 7558 1.818674 ACGCTGGGTGAATTTTCCATC 59.181 47.619 0.00 0.00 0.00 3.51
7067 7559 1.818674 GACGCTGGGTGAATTTTCCAT 59.181 47.619 0.70 0.00 0.00 3.41
7068 7560 1.243902 GACGCTGGGTGAATTTTCCA 58.756 50.000 0.70 0.00 0.00 3.53
7069 7561 0.526211 GGACGCTGGGTGAATTTTCC 59.474 55.000 0.70 0.00 0.00 3.13
7070 7562 0.168128 CGGACGCTGGGTGAATTTTC 59.832 55.000 0.70 0.00 0.00 2.29
7071 7563 1.862602 GCGGACGCTGGGTGAATTTT 61.863 55.000 9.76 0.00 38.26 1.82
7072 7564 2.332654 GCGGACGCTGGGTGAATTT 61.333 57.895 9.76 0.00 38.26 1.82
7073 7565 2.746277 GCGGACGCTGGGTGAATT 60.746 61.111 9.76 0.00 38.26 2.17
7074 7566 2.819984 AATGCGGACGCTGGGTGAAT 62.820 55.000 18.04 0.00 42.51 2.57
7075 7567 3.545124 AATGCGGACGCTGGGTGAA 62.545 57.895 18.04 0.00 42.51 3.18
7076 7568 2.173758 TAAATGCGGACGCTGGGTGA 62.174 55.000 18.04 0.00 42.51 4.02
7077 7569 1.743623 TAAATGCGGACGCTGGGTG 60.744 57.895 18.04 0.00 42.51 4.61
7078 7570 1.743995 GTAAATGCGGACGCTGGGT 60.744 57.895 18.04 0.00 42.51 4.51
7079 7571 1.449601 AGTAAATGCGGACGCTGGG 60.450 57.895 18.04 0.00 42.51 4.45
7080 7572 1.715585 CAGTAAATGCGGACGCTGG 59.284 57.895 18.04 0.00 42.51 4.85
7081 7573 1.060937 GCAGTAAATGCGGACGCTG 59.939 57.895 18.04 7.56 46.99 5.18
7082 7574 3.486263 GCAGTAAATGCGGACGCT 58.514 55.556 18.04 0.00 46.99 5.07
7090 7582 6.924060 GTGATGGTACCTACTAGCAGTAAATG 59.076 42.308 14.36 0.00 33.81 2.32
7091 7583 6.238953 CGTGATGGTACCTACTAGCAGTAAAT 60.239 42.308 14.36 0.00 33.81 1.40
7092 7584 5.066893 CGTGATGGTACCTACTAGCAGTAAA 59.933 44.000 14.36 0.00 33.81 2.01
7093 7585 4.577693 CGTGATGGTACCTACTAGCAGTAA 59.422 45.833 14.36 0.00 33.81 2.24
7094 7586 4.132336 CGTGATGGTACCTACTAGCAGTA 58.868 47.826 14.36 0.00 33.81 2.74
7095 7587 2.950309 CGTGATGGTACCTACTAGCAGT 59.050 50.000 14.36 0.00 33.81 4.40
7096 7588 2.293677 CCGTGATGGTACCTACTAGCAG 59.706 54.545 14.36 0.00 33.81 4.24
7097 7589 2.304092 CCGTGATGGTACCTACTAGCA 58.696 52.381 14.36 0.00 37.26 3.49
7098 7590 1.000496 GCCGTGATGGTACCTACTAGC 60.000 57.143 14.36 10.92 41.21 3.42
7099 7591 1.612463 GGCCGTGATGGTACCTACTAG 59.388 57.143 14.36 1.97 41.21 2.57
7100 7592 1.696063 GGCCGTGATGGTACCTACTA 58.304 55.000 14.36 0.00 41.21 1.82
7101 7593 1.047034 GGGCCGTGATGGTACCTACT 61.047 60.000 14.36 0.00 41.21 2.57
7102 7594 1.332144 TGGGCCGTGATGGTACCTAC 61.332 60.000 14.36 8.77 41.21 3.18
7103 7595 1.001888 TGGGCCGTGATGGTACCTA 59.998 57.895 14.36 0.00 41.21 3.08
7104 7596 2.285069 TGGGCCGTGATGGTACCT 60.285 61.111 14.36 0.00 41.21 3.08
7105 7597 1.696097 ATCTGGGCCGTGATGGTACC 61.696 60.000 4.43 4.43 41.21 3.34
7106 7598 0.532862 CATCTGGGCCGTGATGGTAC 60.533 60.000 23.45 0.00 41.21 3.34
7107 7599 0.980754 ACATCTGGGCCGTGATGGTA 60.981 55.000 29.88 0.66 42.96 3.25
7108 7600 1.852157 AACATCTGGGCCGTGATGGT 61.852 55.000 29.88 25.38 42.96 3.55
7109 7601 0.680921 AAACATCTGGGCCGTGATGG 60.681 55.000 29.88 18.39 42.96 3.51
7110 7602 0.734889 GAAACATCTGGGCCGTGATG 59.265 55.000 27.07 27.07 43.90 3.07
7111 7603 0.394352 GGAAACATCTGGGCCGTGAT 60.394 55.000 9.92 8.02 0.00 3.06
7112 7604 1.002624 GGAAACATCTGGGCCGTGA 60.003 57.895 9.92 5.99 0.00 4.35
7113 7605 0.893270 TTGGAAACATCTGGGCCGTG 60.893 55.000 0.00 0.00 42.32 4.94
7114 7606 1.458486 TTGGAAACATCTGGGCCGT 59.542 52.632 0.00 0.00 42.32 5.68
7115 7607 4.413928 TTGGAAACATCTGGGCCG 57.586 55.556 0.00 0.00 42.32 6.13
7126 7618 2.909965 GCTGGGCCGTGTTGGAAA 60.910 61.111 0.00 0.00 42.00 3.13
7127 7619 4.966787 GGCTGGGCCGTGTTGGAA 62.967 66.667 0.00 0.00 39.62 3.53
7137 7629 2.677875 CCAGGAAAGTGGCTGGGC 60.678 66.667 0.00 0.00 33.61 5.36
7139 7631 2.677875 GCCCAGGAAAGTGGCTGG 60.678 66.667 0.00 0.00 42.01 4.85
7140 7632 2.677875 GGCCCAGGAAAGTGGCTG 60.678 66.667 0.00 0.00 44.71 4.85
7141 7633 2.473365 AAGGCCCAGGAAAGTGGCT 61.473 57.895 0.00 0.00 44.71 4.75
7142 7634 2.118294 AAGGCCCAGGAAAGTGGC 59.882 61.111 0.00 0.00 44.59 5.01
7143 7635 0.895559 GACAAGGCCCAGGAAAGTGG 60.896 60.000 0.00 0.00 37.34 4.00
7144 7636 1.237285 CGACAAGGCCCAGGAAAGTG 61.237 60.000 0.00 0.00 0.00 3.16
7145 7637 1.073199 CGACAAGGCCCAGGAAAGT 59.927 57.895 0.00 0.00 0.00 2.66
7146 7638 1.073199 ACGACAAGGCCCAGGAAAG 59.927 57.895 0.00 0.00 0.00 2.62
7147 7639 1.228124 CACGACAAGGCCCAGGAAA 60.228 57.895 0.00 0.00 0.00 3.13
7148 7640 2.429930 CACGACAAGGCCCAGGAA 59.570 61.111 0.00 0.00 0.00 3.36
7149 7641 4.329545 GCACGACAAGGCCCAGGA 62.330 66.667 0.00 0.00 0.00 3.86
7175 7667 1.687563 AAAACTTTGTCAGACGGGGG 58.312 50.000 0.00 0.00 0.00 5.40
7176 7668 2.034179 GGAAAAACTTTGTCAGACGGGG 59.966 50.000 0.00 0.00 0.00 5.73
7177 7669 2.685897 TGGAAAAACTTTGTCAGACGGG 59.314 45.455 0.00 0.00 0.00 5.28
7178 7670 4.364415 TTGGAAAAACTTTGTCAGACGG 57.636 40.909 0.00 0.00 0.00 4.79
7179 7671 5.288472 CCTTTTGGAAAAACTTTGTCAGACG 59.712 40.000 0.00 0.00 44.07 4.18
7180 7672 6.647212 CCTTTTGGAAAAACTTTGTCAGAC 57.353 37.500 0.00 0.00 44.07 3.51
7196 7688 4.039609 AGTCAGCCTTCAATTTCCTTTTGG 59.960 41.667 0.00 0.00 42.21 3.28
7197 7689 4.986659 CAGTCAGCCTTCAATTTCCTTTTG 59.013 41.667 0.00 0.00 0.00 2.44
7198 7690 4.502087 GCAGTCAGCCTTCAATTTCCTTTT 60.502 41.667 0.00 0.00 37.23 2.27
7199 7691 3.006217 GCAGTCAGCCTTCAATTTCCTTT 59.994 43.478 0.00 0.00 37.23 3.11
7200 7692 2.560105 GCAGTCAGCCTTCAATTTCCTT 59.440 45.455 0.00 0.00 37.23 3.36
7201 7693 2.165998 GCAGTCAGCCTTCAATTTCCT 58.834 47.619 0.00 0.00 37.23 3.36
7202 7694 1.135575 CGCAGTCAGCCTTCAATTTCC 60.136 52.381 0.00 0.00 41.38 3.13
7203 7695 1.537202 ACGCAGTCAGCCTTCAATTTC 59.463 47.619 0.00 0.00 29.74 2.17
7204 7696 1.267806 CACGCAGTCAGCCTTCAATTT 59.732 47.619 0.00 0.00 41.61 1.82
7205 7697 0.877071 CACGCAGTCAGCCTTCAATT 59.123 50.000 0.00 0.00 41.61 2.32
7206 7698 0.250467 ACACGCAGTCAGCCTTCAAT 60.250 50.000 0.00 0.00 41.61 2.57
7207 7699 1.146041 ACACGCAGTCAGCCTTCAA 59.854 52.632 0.00 0.00 41.61 2.69
7208 7700 1.595109 CACACGCAGTCAGCCTTCA 60.595 57.895 0.00 0.00 41.61 3.02
7209 7701 0.319555 TACACACGCAGTCAGCCTTC 60.320 55.000 0.00 0.00 41.61 3.46
7210 7702 0.321671 ATACACACGCAGTCAGCCTT 59.678 50.000 0.00 0.00 41.61 4.35
7211 7703 0.108615 GATACACACGCAGTCAGCCT 60.109 55.000 0.00 0.00 41.61 4.58
7212 7704 1.413767 CGATACACACGCAGTCAGCC 61.414 60.000 0.00 0.00 41.61 4.85
7213 7705 1.413767 CCGATACACACGCAGTCAGC 61.414 60.000 0.00 0.00 41.61 4.26
7214 7706 0.170339 TCCGATACACACGCAGTCAG 59.830 55.000 0.00 0.00 41.61 3.51
7215 7707 0.599060 TTCCGATACACACGCAGTCA 59.401 50.000 0.00 0.00 41.61 3.41
7216 7708 1.922570 ATTCCGATACACACGCAGTC 58.077 50.000 0.00 0.00 41.61 3.51
7218 7710 2.155732 GCATATTCCGATACACACGCAG 59.844 50.000 0.00 0.00 0.00 5.18
7219 7711 2.131972 GCATATTCCGATACACACGCA 58.868 47.619 0.00 0.00 0.00 5.24
7220 7712 1.459592 GGCATATTCCGATACACACGC 59.540 52.381 0.00 0.00 0.00 5.34
7221 7713 2.066262 GGGCATATTCCGATACACACG 58.934 52.381 0.00 0.00 0.00 4.49
7222 7714 2.038557 AGGGGCATATTCCGATACACAC 59.961 50.000 0.00 0.00 0.00 3.82
7223 7715 2.334977 AGGGGCATATTCCGATACACA 58.665 47.619 0.00 0.00 0.00 3.72
7224 7716 4.546829 TTAGGGGCATATTCCGATACAC 57.453 45.455 0.00 0.00 0.00 2.90
7225 7717 4.595781 AGTTTAGGGGCATATTCCGATACA 59.404 41.667 0.00 0.00 0.00 2.29
7226 7718 5.161943 AGTTTAGGGGCATATTCCGATAC 57.838 43.478 0.00 0.00 0.00 2.24
7227 7719 5.105064 GCTAGTTTAGGGGCATATTCCGATA 60.105 44.000 0.00 0.00 0.00 2.92
7228 7720 4.323562 GCTAGTTTAGGGGCATATTCCGAT 60.324 45.833 0.00 0.00 0.00 4.18
7229 7721 3.007614 GCTAGTTTAGGGGCATATTCCGA 59.992 47.826 0.00 0.00 0.00 4.55
7230 7722 3.335579 GCTAGTTTAGGGGCATATTCCG 58.664 50.000 0.00 0.00 0.00 4.30
7231 7723 3.244457 ACGCTAGTTTAGGGGCATATTCC 60.244 47.826 5.36 0.00 42.45 3.01
7232 7724 3.995048 GACGCTAGTTTAGGGGCATATTC 59.005 47.826 1.54 0.00 45.39 1.75
7233 7725 4.004196 GACGCTAGTTTAGGGGCATATT 57.996 45.455 1.54 0.00 45.39 1.28
7234 7726 3.679824 GACGCTAGTTTAGGGGCATAT 57.320 47.619 1.54 0.00 45.39 1.78
7238 7730 2.223994 CCTAAGACGCTAGTTTAGGGGC 60.224 54.545 12.71 2.01 46.35 5.80
7239 7731 2.364647 CCCTAAGACGCTAGTTTAGGGG 59.635 54.545 22.64 10.96 45.30 4.79
7240 7732 3.729862 CCCTAAGACGCTAGTTTAGGG 57.270 52.381 19.74 19.74 44.67 3.53
7241 7733 6.837471 ATATCCCTAAGACGCTAGTTTAGG 57.163 41.667 13.23 13.23 38.88 2.69
7243 7735 9.971922 GTAAAATATCCCTAAGACGCTAGTTTA 57.028 33.333 0.00 0.00 0.00 2.01
7244 7736 7.650903 CGTAAAATATCCCTAAGACGCTAGTTT 59.349 37.037 0.00 0.00 0.00 2.66
7245 7737 7.144000 CGTAAAATATCCCTAAGACGCTAGTT 58.856 38.462 0.00 0.00 0.00 2.24
7246 7738 6.264067 ACGTAAAATATCCCTAAGACGCTAGT 59.736 38.462 0.00 0.00 32.52 2.57
7247 7739 6.675987 ACGTAAAATATCCCTAAGACGCTAG 58.324 40.000 0.00 0.00 32.52 3.42
7248 7740 6.639632 ACGTAAAATATCCCTAAGACGCTA 57.360 37.500 0.00 0.00 32.52 4.26
7249 7741 5.526506 ACGTAAAATATCCCTAAGACGCT 57.473 39.130 0.00 0.00 32.52 5.07
7250 7742 6.594284 AAACGTAAAATATCCCTAAGACGC 57.406 37.500 0.00 0.00 32.52 5.19
7251 7743 9.906111 GTTAAAACGTAAAATATCCCTAAGACG 57.094 33.333 0.00 0.00 35.30 4.18
7256 7748 9.822185 GAGGAGTTAAAACGTAAAATATCCCTA 57.178 33.333 0.00 0.00 0.00 3.53
7257 7749 8.323567 TGAGGAGTTAAAACGTAAAATATCCCT 58.676 33.333 0.00 0.00 0.00 4.20
7258 7750 8.496707 TGAGGAGTTAAAACGTAAAATATCCC 57.503 34.615 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.