Multiple sequence alignment - TraesCS5B01G188600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G188600 chr5B 100.000 7822 0 0 540 8361 340616304 340624125 0.000000e+00 14445.0
1 TraesCS5B01G188600 chr5B 100.000 208 0 0 1 208 340615765 340615972 1.320000e-102 385.0
2 TraesCS5B01G188600 chr5B 93.137 102 6 1 3033 3133 121676384 121676283 1.880000e-31 148.0
3 TraesCS5B01G188600 chr5B 86.735 98 7 5 7795 7891 32270126 32270034 4.130000e-18 104.0
4 TraesCS5B01G188600 chr5D 95.552 3350 94 22 4860 8209 299402420 299405714 0.000000e+00 5310.0
5 TraesCS5B01G188600 chr5D 91.887 2157 112 22 915 3028 299398329 299400465 0.000000e+00 2955.0
6 TraesCS5B01G188600 chr5D 95.484 1550 49 10 3336 4866 299400839 299402386 0.000000e+00 2455.0
7 TraesCS5B01G188600 chr5D 80.211 475 63 21 4879 5345 435124766 435125217 2.250000e-85 327.0
8 TraesCS5B01G188600 chr5D 91.071 168 12 3 3123 3288 299400472 299400638 3.040000e-54 224.0
9 TraesCS5B01G188600 chr5D 84.264 197 29 2 3 197 299397700 299397896 3.080000e-44 191.0
10 TraesCS5B01G188600 chr5D 87.500 96 9 3 7796 7890 564127794 564127887 3.190000e-19 108.0
11 TraesCS5B01G188600 chr5D 93.103 58 1 1 3280 3334 299400697 299400754 1.930000e-11 82.4
12 TraesCS5B01G188600 chr5A 94.903 3296 131 19 4860 8145 396500511 396503779 0.000000e+00 5121.0
13 TraesCS5B01G188600 chr5A 92.684 2187 108 23 884 3031 396496548 396498721 0.000000e+00 3105.0
14 TraesCS5B01G188600 chr5A 94.441 1763 68 13 3123 4866 396498726 396500477 0.000000e+00 2686.0
15 TraesCS5B01G188600 chr5A 98.701 154 2 0 540 693 566272833 566272986 2.970000e-69 274.0
16 TraesCS5B01G188600 chr5A 78.059 474 74 20 4879 5345 154618334 154617884 1.070000e-68 272.0
17 TraesCS5B01G188600 chr5A 88.950 181 16 2 688 865 396496300 396496479 3.930000e-53 220.0
18 TraesCS5B01G188600 chr5A 73.030 571 126 23 5721 6276 691438218 691437661 8.630000e-40 176.0
19 TraesCS5B01G188600 chr5A 84.713 157 18 3 8198 8348 396679979 396680135 1.450000e-32 152.0
20 TraesCS5B01G188600 chr5A 85.271 129 11 7 3016 3137 90044767 90044640 8.810000e-25 126.0
21 TraesCS5B01G188600 chr6D 80.211 475 62 20 4879 5345 161148941 161149391 2.250000e-85 327.0
22 TraesCS5B01G188600 chr6D 93.642 173 10 1 540 711 8674640 8674468 2.990000e-64 257.0
23 TraesCS5B01G188600 chr6D 87.500 96 11 1 7795 7890 448594505 448594411 8.870000e-20 110.0
24 TraesCS5B01G188600 chr4A 81.667 420 52 21 4934 5345 94763215 94763617 8.090000e-85 326.0
25 TraesCS5B01G188600 chr4A 84.314 102 12 4 7795 7895 157808751 157808653 6.910000e-16 97.1
26 TraesCS5B01G188600 chr7A 98.684 152 2 0 540 691 97887429 97887580 3.850000e-68 270.0
27 TraesCS5B01G188600 chr7A 98.684 152 2 0 540 691 643419938 643420089 3.850000e-68 270.0
28 TraesCS5B01G188600 chr7A 94.611 167 9 0 540 706 556571421 556571255 8.330000e-65 259.0
29 TraesCS5B01G188600 chr7A 91.589 107 6 2 3024 3127 511927308 511927414 2.430000e-30 145.0
30 TraesCS5B01G188600 chr1A 98.684 152 2 0 540 691 33222177 33222026 3.850000e-68 270.0
31 TraesCS5B01G188600 chr1A 98.684 152 2 0 540 691 294339673 294339522 3.850000e-68 270.0
32 TraesCS5B01G188600 chr1A 98.052 154 3 0 540 693 219372778 219372625 1.380000e-67 268.0
33 TraesCS5B01G188600 chr1A 79.208 303 61 2 7037 7338 531721878 531722179 8.500000e-50 209.0
34 TraesCS5B01G188600 chr1A 87.879 165 19 1 2502 2665 107472806 107472642 8.560000e-45 193.0
35 TraesCS5B01G188600 chr1A 95.789 95 3 1 3033 3126 351606854 351606760 1.450000e-32 152.0
36 TraesCS5B01G188600 chr1A 84.722 72 10 1 7795 7865 293740879 293740950 4.190000e-08 71.3
37 TraesCS5B01G188600 chr1B 97.452 157 4 0 540 696 520523902 520523746 1.380000e-67 268.0
38 TraesCS5B01G188600 chr1B 78.808 302 62 2 7038 7338 585331008 585331308 1.420000e-47 202.0
39 TraesCS5B01G188600 chr1B 94.059 101 3 3 3029 3126 359902146 359902046 5.230000e-32 150.0
40 TraesCS5B01G188600 chr1B 87.500 96 11 1 7795 7890 37605976 37605882 8.870000e-20 110.0
41 TraesCS5B01G188600 chr1B 85.417 96 13 1 7795 7890 49146360 49146454 1.920000e-16 99.0
42 TraesCS5B01G188600 chr1D 78.878 303 62 2 7037 7338 433368513 433368814 3.960000e-48 204.0
43 TraesCS5B01G188600 chr1D 84.536 97 14 1 7795 7890 486315167 486315263 2.480000e-15 95.3
44 TraesCS5B01G188600 chr3D 73.529 578 112 34 5722 6276 481911343 481910784 1.850000e-41 182.0
45 TraesCS5B01G188600 chr3D 76.512 281 62 3 7059 7337 481909574 481909296 5.230000e-32 150.0
46 TraesCS5B01G188600 chr3D 93.814 97 6 0 3033 3129 277538599 277538503 6.760000e-31 147.0
47 TraesCS5B01G188600 chr3D 93.750 96 4 2 3020 3113 605264167 605264262 8.750000e-30 143.0
48 TraesCS5B01G188600 chr3D 87.500 64 8 0 7795 7858 83319251 83319188 3.240000e-09 75.0
49 TraesCS5B01G188600 chr4B 73.077 572 124 24 5721 6276 653146872 653147429 8.630000e-40 176.0
50 TraesCS5B01G188600 chr4B 91.667 108 6 3 3021 3126 28147540 28147646 6.760000e-31 147.0
51 TraesCS5B01G188600 chr4B 87.629 97 9 3 7795 7890 637365022 637364928 8.870000e-20 110.0
52 TraesCS5B01G188600 chrUn 72.807 570 129 21 5721 6276 126754897 126755454 4.010000e-38 171.0
53 TraesCS5B01G188600 chrUn 83.871 93 14 1 7800 7892 91651211 91651120 4.160000e-13 87.9
54 TraesCS5B01G188600 chrUn 83.871 93 14 1 7800 7892 239780495 239780586 4.160000e-13 87.9
55 TraesCS5B01G188600 chrUn 83.871 93 14 1 7800 7892 274319999 274319908 4.160000e-13 87.9
56 TraesCS5B01G188600 chr7D 92.381 105 4 4 3024 3124 370726189 370726293 6.760000e-31 147.0
57 TraesCS5B01G188600 chr2D 86.614 127 16 1 5219 5345 29648806 29648931 1.130000e-28 139.0
58 TraesCS5B01G188600 chr2D 87.629 97 10 2 7795 7890 618253173 618253078 2.470000e-20 111.0
59 TraesCS5B01G188600 chr2D 85.417 96 13 1 7795 7890 71846848 71846942 1.920000e-16 99.0
60 TraesCS5B01G188600 chr3B 87.805 123 8 6 3008 3124 423806080 423806201 4.070000e-28 137.0
61 TraesCS5B01G188600 chr3B 88.542 96 8 3 7796 7890 4232758 4232665 6.860000e-21 113.0
62 TraesCS5B01G188600 chr3B 88.542 96 8 3 7796 7890 5104266 5104173 6.860000e-21 113.0
63 TraesCS5B01G188600 chr2B 88.235 119 7 6 3022 3138 90719932 90720045 1.460000e-27 135.0
64 TraesCS5B01G188600 chr2B 85.567 97 10 4 3044 3140 230575242 230575150 1.920000e-16 99.0
65 TraesCS5B01G188600 chr2A 89.109 101 9 2 7795 7894 706494768 706494867 3.170000e-24 124.0
66 TraesCS5B01G188600 chr3A 89.474 95 9 1 7796 7890 162081895 162081988 1.470000e-22 119.0
67 TraesCS5B01G188600 chr6B 87.629 97 9 3 7795 7890 37309980 37310074 8.870000e-20 110.0
68 TraesCS5B01G188600 chr6A 86.139 101 13 1 7796 7896 593028799 593028898 3.190000e-19 108.0
69 TraesCS5B01G188600 chr4D 87.500 64 6 2 7795 7857 435065035 435065097 1.160000e-08 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G188600 chr5B 340615765 340624125 8360 False 7415.000000 14445 100.0000 1 8361 2 chr5B.!!$F1 8360
1 TraesCS5B01G188600 chr5D 299397700 299405714 8014 False 1869.566667 5310 91.8935 3 8209 6 chr5D.!!$F3 8206
2 TraesCS5B01G188600 chr5A 396496300 396503779 7479 False 2783.000000 5121 92.7445 688 8145 4 chr5A.!!$F3 7457

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
958 1059 0.178873 ACCCCACAGTCCACATACCT 60.179 55.000 0.00 0.0 0.00 3.08 F
1847 1985 0.036765 GACATGTACGGGACCTGCAA 60.037 55.000 0.00 0.0 0.00 4.08 F
3236 3393 0.249073 CCGAGAGAGCAATGGTACCG 60.249 60.000 7.57 0.0 0.00 4.02 F
3274 3431 0.438830 GCAGCTGTAGCAACGTGTAC 59.561 55.000 16.64 0.0 45.16 2.90 F
4080 4408 1.289160 TTGCTTGAGCCCATCTACCT 58.711 50.000 0.00 0.0 41.18 3.08 F
4996 5365 2.158842 ATCTGTCAAGATAGCCACAGGC 60.159 50.000 0.00 0.0 41.57 4.85 F
6150 6521 2.887152 AGCTTTCTTTCCCACATCACAC 59.113 45.455 0.00 0.0 0.00 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1869 2007 0.171455 CCTGCTCCAGTGTCGAGTAC 59.829 60.000 0.00 0.0 0.00 2.73 R
3238 3395 0.380733 TGCTACCTCACATCGCTACG 59.619 55.000 0.00 0.0 0.00 3.51 R
4282 4610 2.093306 TGGGAAACAGAGCACATACG 57.907 50.000 0.00 0.0 0.00 3.06 R
5068 5437 4.558226 AGATGTAACCAATCACTGCAGA 57.442 40.909 23.35 0.0 0.00 4.26 R
5549 5918 3.059325 GGCTACTTTATGATTCTGCTGCG 60.059 47.826 0.00 0.0 0.00 5.18 R
6516 6887 0.739462 TTTCATGCCTCCGCTGTACG 60.739 55.000 0.00 0.0 43.15 3.67 R
7407 7784 0.538118 CATGGAATGCTTGGGGTTGG 59.462 55.000 0.00 0.0 37.62 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.598176 CGTATGCTAGTAATCATACACGTG 57.402 41.667 15.48 15.48 43.01 4.49
46 47 6.919115 GTGCAATGCATGTTATGATATCACAA 59.081 34.615 12.38 0.00 41.91 3.33
66 67 8.894409 TCACAAAAGATATTAACTTCATTGCG 57.106 30.769 0.00 0.00 0.00 4.85
83 84 6.163476 TCATTGCGCATTAGTAGTATTAGGG 58.837 40.000 12.75 0.00 0.00 3.53
86 87 6.164417 TGCGCATTAGTAGTATTAGGGAAA 57.836 37.500 5.66 0.00 0.00 3.13
88 89 6.704493 TGCGCATTAGTAGTATTAGGGAAAAG 59.296 38.462 5.66 0.00 0.00 2.27
91 92 8.926710 CGCATTAGTAGTATTAGGGAAAAGATG 58.073 37.037 0.00 0.00 0.00 2.90
92 93 9.780186 GCATTAGTAGTATTAGGGAAAAGATGT 57.220 33.333 0.00 0.00 0.00 3.06
97 98 9.449719 AGTAGTATTAGGGAAAAGATGTTTGTG 57.550 33.333 0.00 0.00 0.00 3.33
98 99 9.227777 GTAGTATTAGGGAAAAGATGTTTGTGT 57.772 33.333 0.00 0.00 0.00 3.72
164 167 1.352114 ATCAATTGCATTGCACGCAC 58.648 45.000 11.66 0.00 38.71 5.34
167 170 0.597118 AATTGCATTGCACGCACGTT 60.597 45.000 11.66 5.59 38.71 3.99
174 177 2.519002 TTGCACGCACGTTGATATTC 57.481 45.000 0.00 0.00 0.00 1.75
177 180 0.315059 CACGCACGTTGATATTCGGC 60.315 55.000 0.00 0.00 0.00 5.54
182 185 2.483876 CACGTTGATATTCGGCAGGAT 58.516 47.619 0.00 0.00 0.00 3.24
197 200 3.119029 GGCAGGATGTAGTTACGTGGTTA 60.119 47.826 0.00 0.00 39.31 2.85
198 201 4.442472 GGCAGGATGTAGTTACGTGGTTAT 60.442 45.833 0.00 0.00 39.31 1.89
199 202 4.743644 GCAGGATGTAGTTACGTGGTTATC 59.256 45.833 0.00 0.00 39.31 1.75
200 203 5.680408 GCAGGATGTAGTTACGTGGTTATCA 60.680 44.000 0.00 0.00 39.31 2.15
201 204 6.513180 CAGGATGTAGTTACGTGGTTATCAT 58.487 40.000 0.00 0.00 0.00 2.45
202 205 6.641314 CAGGATGTAGTTACGTGGTTATCATC 59.359 42.308 0.00 5.71 0.00 2.92
204 207 5.816449 TGTAGTTACGTGGTTATCATCGA 57.184 39.130 0.00 0.00 0.00 3.59
205 208 6.193514 TGTAGTTACGTGGTTATCATCGAA 57.806 37.500 0.00 0.00 0.00 3.71
206 209 6.260377 TGTAGTTACGTGGTTATCATCGAAG 58.740 40.000 0.00 0.00 0.00 3.79
207 210 5.320549 AGTTACGTGGTTATCATCGAAGT 57.679 39.130 0.00 0.00 0.00 3.01
584 587 9.302345 AGACATTTCAAATGACTACTACATACG 57.698 33.333 17.30 0.00 0.00 3.06
585 588 8.420374 ACATTTCAAATGACTACTACATACGG 57.580 34.615 17.30 0.00 0.00 4.02
586 589 8.255206 ACATTTCAAATGACTACTACATACGGA 58.745 33.333 17.30 0.00 0.00 4.69
587 590 9.261180 CATTTCAAATGACTACTACATACGGAT 57.739 33.333 3.82 0.00 0.00 4.18
588 591 8.642908 TTTCAAATGACTACTACATACGGATG 57.357 34.615 5.94 5.94 39.16 3.51
590 593 8.454570 TCAAATGACTACTACATACGGATGTA 57.545 34.615 19.32 19.32 44.77 2.29
591 594 9.074576 TCAAATGACTACTACATACGGATGTAT 57.925 33.333 20.64 13.02 45.42 2.29
630 633 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
631 634 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
632 635 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
633 636 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
634 637 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
635 638 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
636 639 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
637 640 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
638 641 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
639 642 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
640 643 3.871594 ACTCATTTTGCTCCGTATGTAGC 59.128 43.478 0.00 0.00 39.25 3.58
641 644 3.202906 TCATTTTGCTCCGTATGTAGCC 58.797 45.455 0.00 0.00 37.97 3.93
642 645 2.772077 TTTTGCTCCGTATGTAGCCA 57.228 45.000 0.00 0.00 37.97 4.75
643 646 2.018542 TTTGCTCCGTATGTAGCCAC 57.981 50.000 0.00 0.00 37.97 5.01
644 647 1.191535 TTGCTCCGTATGTAGCCACT 58.808 50.000 0.00 0.00 37.97 4.00
645 648 1.191535 TGCTCCGTATGTAGCCACTT 58.808 50.000 0.00 0.00 37.97 3.16
646 649 2.380941 TGCTCCGTATGTAGCCACTTA 58.619 47.619 0.00 0.00 37.97 2.24
647 650 2.963101 TGCTCCGTATGTAGCCACTTAT 59.037 45.455 0.00 0.00 37.97 1.73
648 651 3.386726 TGCTCCGTATGTAGCCACTTATT 59.613 43.478 0.00 0.00 37.97 1.40
649 652 3.741344 GCTCCGTATGTAGCCACTTATTG 59.259 47.826 0.00 0.00 32.40 1.90
650 653 4.500887 GCTCCGTATGTAGCCACTTATTGA 60.501 45.833 0.00 0.00 32.40 2.57
651 654 5.597806 CTCCGTATGTAGCCACTTATTGAA 58.402 41.667 0.00 0.00 0.00 2.69
652 655 5.979993 TCCGTATGTAGCCACTTATTGAAA 58.020 37.500 0.00 0.00 0.00 2.69
653 656 6.588204 TCCGTATGTAGCCACTTATTGAAAT 58.412 36.000 0.00 0.00 0.00 2.17
654 657 6.481976 TCCGTATGTAGCCACTTATTGAAATG 59.518 38.462 0.00 0.00 0.00 2.32
655 658 6.481976 CCGTATGTAGCCACTTATTGAAATGA 59.518 38.462 0.00 0.00 0.00 2.57
656 659 7.345192 CGTATGTAGCCACTTATTGAAATGAC 58.655 38.462 0.00 0.00 0.00 3.06
657 660 7.224753 CGTATGTAGCCACTTATTGAAATGACT 59.775 37.037 0.00 0.00 0.00 3.41
658 661 9.542462 GTATGTAGCCACTTATTGAAATGACTA 57.458 33.333 0.00 0.00 0.00 2.59
659 662 8.668510 ATGTAGCCACTTATTGAAATGACTAG 57.331 34.615 0.00 0.00 0.00 2.57
660 663 7.847096 TGTAGCCACTTATTGAAATGACTAGA 58.153 34.615 0.00 0.00 0.00 2.43
661 664 8.318412 TGTAGCCACTTATTGAAATGACTAGAA 58.682 33.333 0.00 0.00 0.00 2.10
662 665 9.162764 GTAGCCACTTATTGAAATGACTAGAAA 57.837 33.333 0.00 0.00 0.00 2.52
663 666 8.273780 AGCCACTTATTGAAATGACTAGAAAG 57.726 34.615 0.00 0.00 0.00 2.62
664 667 8.103305 AGCCACTTATTGAAATGACTAGAAAGA 58.897 33.333 0.00 0.00 0.00 2.52
665 668 8.178313 GCCACTTATTGAAATGACTAGAAAGAC 58.822 37.037 0.00 0.00 0.00 3.01
666 669 9.219603 CCACTTATTGAAATGACTAGAAAGACA 57.780 33.333 0.00 0.00 0.00 3.41
679 682 9.924650 TGACTAGAAAGACAAGTATTTAGGAAC 57.075 33.333 0.00 0.00 0.00 3.62
680 683 8.983307 ACTAGAAAGACAAGTATTTAGGAACG 57.017 34.615 0.00 0.00 0.00 3.95
681 684 8.033626 ACTAGAAAGACAAGTATTTAGGAACGG 58.966 37.037 0.00 0.00 0.00 4.44
682 685 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
683 686 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
684 687 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
685 688 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
686 689 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
690 693 5.713807 AGTATTTAGGAACGGAGGGAGTAT 58.286 41.667 0.00 0.00 0.00 2.12
721 724 0.250166 ACGCTAAAAACACCGGAGCT 60.250 50.000 9.46 0.00 0.00 4.09
745 748 0.389391 AGACCATTGGATAGACGCGG 59.611 55.000 12.47 0.00 0.00 6.46
750 753 1.860950 CATTGGATAGACGCGGTTGAG 59.139 52.381 12.47 0.00 0.00 3.02
762 765 1.450312 GGTTGAGCGGGTGAGATGG 60.450 63.158 0.00 0.00 0.00 3.51
793 830 2.729882 TCGCAACTCGCTCTTTTTCTAC 59.270 45.455 0.00 0.00 39.08 2.59
885 952 8.889849 ATACAAACACAGCAAAATACGTTATC 57.110 30.769 0.00 0.00 0.00 1.75
886 953 6.966021 ACAAACACAGCAAAATACGTTATCT 58.034 32.000 0.00 0.00 0.00 1.98
911 1010 4.360951 AATTCAAGACGGAAGGGTACAA 57.639 40.909 0.00 0.00 0.00 2.41
913 1012 3.328382 TCAAGACGGAAGGGTACAATG 57.672 47.619 0.00 0.00 0.00 2.82
941 1040 5.221244 ACAAAGCTTCCAAAAGTCACATACC 60.221 40.000 0.00 0.00 34.79 2.73
954 1053 1.281867 CACATACCCCACAGTCCACAT 59.718 52.381 0.00 0.00 0.00 3.21
958 1059 0.178873 ACCCCACAGTCCACATACCT 60.179 55.000 0.00 0.00 0.00 3.08
975 1079 1.599047 CTACACAGCTCCAGGGGTG 59.401 63.158 0.00 0.00 40.13 4.61
1027 1131 7.557719 TGATCAGAACCAGAGAAAGAAAAGTTT 59.442 33.333 0.00 0.00 0.00 2.66
1037 1141 3.525268 AAGAAAAGTTTGCCCACACAG 57.475 42.857 0.00 0.00 0.00 3.66
1040 1144 3.131046 AGAAAAGTTTGCCCACACAGAAG 59.869 43.478 0.00 0.00 0.00 2.85
1041 1145 2.143876 AAGTTTGCCCACACAGAAGT 57.856 45.000 0.00 0.00 0.00 3.01
1127 1232 0.321830 GGTTTCGTCCCGATTCCCAA 60.322 55.000 0.00 0.00 35.23 4.12
1181 1289 3.878667 CTTCCCCATCTCCCCGCC 61.879 72.222 0.00 0.00 0.00 6.13
1317 1425 2.672961 GCAATTTTCCTACCTTGCCC 57.327 50.000 0.00 0.00 38.39 5.36
1335 1443 2.934553 GCCCGTTCGCTTTTATCTACTT 59.065 45.455 0.00 0.00 0.00 2.24
1336 1444 3.001026 GCCCGTTCGCTTTTATCTACTTC 59.999 47.826 0.00 0.00 0.00 3.01
1337 1445 4.430908 CCCGTTCGCTTTTATCTACTTCT 58.569 43.478 0.00 0.00 0.00 2.85
1338 1446 4.267928 CCCGTTCGCTTTTATCTACTTCTG 59.732 45.833 0.00 0.00 0.00 3.02
1339 1447 4.259850 CCGTTCGCTTTTATCTACTTCTGC 60.260 45.833 0.00 0.00 0.00 4.26
1340 1448 4.546456 CGTTCGCTTTTATCTACTTCTGCG 60.546 45.833 0.00 0.00 42.89 5.18
1341 1449 2.858344 TCGCTTTTATCTACTTCTGCGC 59.142 45.455 0.00 0.00 41.57 6.09
1342 1450 2.860735 CGCTTTTATCTACTTCTGCGCT 59.139 45.455 9.73 0.00 35.98 5.92
1343 1451 3.302092 CGCTTTTATCTACTTCTGCGCTG 60.302 47.826 9.73 8.88 35.98 5.18
1344 1452 3.619038 GCTTTTATCTACTTCTGCGCTGT 59.381 43.478 9.73 5.05 0.00 4.40
1359 1473 1.999051 CTGTGTTGATACGCCGCTC 59.001 57.895 0.00 0.00 33.79 5.03
1362 1476 0.736325 GTGTTGATACGCCGCTCTGT 60.736 55.000 0.00 0.00 0.00 3.41
1407 1521 3.365265 GCCTGCACGGTTCTTGGG 61.365 66.667 4.45 0.00 34.25 4.12
1413 1527 2.046285 CACGGTTCTTGGGGATGCC 61.046 63.158 0.00 0.00 0.00 4.40
1438 1559 4.790861 GGTCGACCGCGGGAAGTC 62.791 72.222 31.76 16.98 38.28 3.01
1449 1570 2.412112 GGAAGTCCCGTCGATCCG 59.588 66.667 0.00 0.00 0.00 4.18
1489 1610 2.335011 GGCGCCGCTGAACTTTTT 59.665 55.556 12.58 0.00 0.00 1.94
1506 1627 0.767375 TTTGGCTCCAGCTGAGTTCT 59.233 50.000 17.39 0.00 43.48 3.01
1512 1633 2.485124 GCTCCAGCTGAGTTCTGCATAT 60.485 50.000 17.39 0.00 43.48 1.78
1519 1640 5.634439 CAGCTGAGTTCTGCATATATCTGTC 59.366 44.000 8.42 0.00 42.33 3.51
1563 1697 2.248487 CGGCGTTTCAGACTAGTACAC 58.752 52.381 0.00 0.00 0.00 2.90
1671 1805 3.556365 CAGTAATGCAGCATCTGACTCTG 59.444 47.826 15.95 10.86 32.44 3.35
1675 1809 0.997932 GCAGCATCTGACTCTGTTCG 59.002 55.000 8.98 0.00 32.44 3.95
1847 1985 0.036765 GACATGTACGGGACCTGCAA 60.037 55.000 0.00 0.00 0.00 4.08
1860 1998 0.676151 CCTGCAAGAAGAGGGAGTGC 60.676 60.000 0.00 0.00 34.07 4.40
1878 2016 2.683859 CGGCGTCCAGTACTCGACA 61.684 63.158 18.90 0.00 32.46 4.35
1971 2109 1.122019 AGTTCCGGGCTGTCAGAACT 61.122 55.000 3.32 10.13 43.06 3.01
2004 2142 1.691196 TTGATGATTTGCCCGATCCC 58.309 50.000 0.00 0.00 0.00 3.85
2036 2174 2.909965 TTTGTCTTGCCCCGCCAC 60.910 61.111 0.00 0.00 0.00 5.01
2097 2235 2.566913 ACGTGCTTCCACAATACAACA 58.433 42.857 0.00 0.00 42.17 3.33
2175 2313 2.613474 CCCGTTTTCCAATCGACAGGTA 60.613 50.000 5.01 0.00 0.00 3.08
2274 2412 0.976641 TGTGAGTTCCTTCGATGCCT 59.023 50.000 0.00 0.00 0.00 4.75
2373 2513 1.995542 AGGGTTCAGACACCATTCCAT 59.004 47.619 4.71 0.00 38.79 3.41
2388 2528 6.957920 CCATTCCATGGTATACACAATTGA 57.042 37.500 13.59 0.00 45.54 2.57
2396 2536 5.865085 TGGTATACACAATTGATAGAGCCC 58.135 41.667 13.59 4.33 0.00 5.19
2450 2590 0.911525 AGCCTCAGTGTGTGCCCTAT 60.912 55.000 0.00 0.00 0.00 2.57
2618 2758 5.063691 TGTGACGTACTGTTTTACACCAAAG 59.936 40.000 0.00 0.00 0.00 2.77
2639 2781 8.785946 CCAAAGTTTATTTGCATTTGAAGGAAT 58.214 29.630 7.99 0.00 33.69 3.01
2652 2794 9.189723 GCATTTGAAGGAATTCTATTTAGATGC 57.810 33.333 18.40 18.40 31.40 3.91
2700 2848 1.392510 GGTGTTTCCTCGAATACGCAC 59.607 52.381 0.00 0.00 39.58 5.34
2780 2928 2.728007 GCCCTAGGCTTCAAAATGACT 58.272 47.619 2.05 0.00 46.69 3.41
2802 2950 9.119418 TGACTGACAAACATAAAAGAAGATGAA 57.881 29.630 0.00 0.00 0.00 2.57
2866 3014 3.057456 AGTTACTGTGGACTAGCAGAACG 60.057 47.826 2.53 0.00 36.62 3.95
2890 3038 2.415857 CTCGTACAGCTCTAAGTGTCGT 59.584 50.000 0.00 0.00 0.00 4.34
2908 3056 1.300931 TGTGACTGCGAGTGCCTTC 60.301 57.895 0.00 0.00 41.78 3.46
2913 3061 0.671781 ACTGCGAGTGCCTTCACATC 60.672 55.000 0.00 0.00 45.49 3.06
2915 3063 2.456119 GCGAGTGCCTTCACATCGG 61.456 63.158 14.19 0.00 45.49 4.18
2916 3064 2.456119 CGAGTGCCTTCACATCGGC 61.456 63.158 0.00 0.00 45.49 5.54
3015 3170 9.933723 AAAAAGCATGCTTCTGTATAAAGATTT 57.066 25.926 32.01 19.96 34.84 2.17
3041 3196 8.773033 TCCTAATTATATTATACCCTCCGTCC 57.227 38.462 0.00 0.00 0.00 4.79
3042 3197 7.786464 TCCTAATTATATTATACCCTCCGTCCC 59.214 40.741 0.00 0.00 0.00 4.46
3043 3198 7.566138 CCTAATTATATTATACCCTCCGTCCCA 59.434 40.741 0.00 0.00 0.00 4.37
3044 3199 7.817910 AATTATATTATACCCTCCGTCCCAA 57.182 36.000 0.00 0.00 0.00 4.12
3045 3200 7.817910 ATTATATTATACCCTCCGTCCCAAA 57.182 36.000 0.00 0.00 0.00 3.28
3046 3201 7.817910 TTATATTATACCCTCCGTCCCAAAT 57.182 36.000 0.00 0.00 0.00 2.32
3047 3202 8.914213 TTATATTATACCCTCCGTCCCAAATA 57.086 34.615 0.00 0.00 0.00 1.40
3048 3203 7.817910 ATATTATACCCTCCGTCCCAAATAA 57.182 36.000 0.00 0.00 0.00 1.40
3049 3204 5.556006 TTATACCCTCCGTCCCAAATAAG 57.444 43.478 0.00 0.00 0.00 1.73
3050 3205 1.665137 ACCCTCCGTCCCAAATAAGT 58.335 50.000 0.00 0.00 0.00 2.24
3051 3206 1.280998 ACCCTCCGTCCCAAATAAGTG 59.719 52.381 0.00 0.00 0.00 3.16
3052 3207 1.280998 CCCTCCGTCCCAAATAAGTGT 59.719 52.381 0.00 0.00 0.00 3.55
3053 3208 2.290705 CCCTCCGTCCCAAATAAGTGTT 60.291 50.000 0.00 0.00 0.00 3.32
3054 3209 3.418047 CCTCCGTCCCAAATAAGTGTTT 58.582 45.455 0.00 0.00 0.00 2.83
3055 3210 3.439129 CCTCCGTCCCAAATAAGTGTTTC 59.561 47.826 0.00 0.00 0.00 2.78
3056 3211 4.069304 CTCCGTCCCAAATAAGTGTTTCA 58.931 43.478 0.00 0.00 0.00 2.69
3057 3212 4.462133 TCCGTCCCAAATAAGTGTTTCAA 58.538 39.130 0.00 0.00 0.00 2.69
3058 3213 4.276431 TCCGTCCCAAATAAGTGTTTCAAC 59.724 41.667 0.00 0.00 0.00 3.18
3059 3214 4.277423 CCGTCCCAAATAAGTGTTTCAACT 59.723 41.667 0.00 0.00 0.00 3.16
3060 3215 5.221165 CCGTCCCAAATAAGTGTTTCAACTT 60.221 40.000 0.00 0.00 42.89 2.66
3061 3216 6.270064 CGTCCCAAATAAGTGTTTCAACTTT 58.730 36.000 0.00 0.00 40.77 2.66
3062 3217 6.198216 CGTCCCAAATAAGTGTTTCAACTTTG 59.802 38.462 0.00 0.00 40.77 2.77
3063 3218 7.039270 GTCCCAAATAAGTGTTTCAACTTTGT 58.961 34.615 0.00 0.00 40.77 2.83
3064 3219 8.192110 GTCCCAAATAAGTGTTTCAACTTTGTA 58.808 33.333 0.00 0.00 40.77 2.41
3065 3220 8.192110 TCCCAAATAAGTGTTTCAACTTTGTAC 58.808 33.333 0.00 0.00 40.77 2.90
3066 3221 8.194769 CCCAAATAAGTGTTTCAACTTTGTACT 58.805 33.333 0.00 0.00 40.77 2.73
3099 3254 6.846325 ACAAAGTTGTACTAAGCTTGAGAC 57.154 37.500 9.86 4.39 40.16 3.36
3100 3255 6.346096 ACAAAGTTGTACTAAGCTTGAGACA 58.654 36.000 9.86 7.12 40.16 3.41
3101 3256 6.258068 ACAAAGTTGTACTAAGCTTGAGACAC 59.742 38.462 9.86 7.18 40.16 3.67
3102 3257 5.793030 AGTTGTACTAAGCTTGAGACACT 57.207 39.130 9.86 7.29 0.00 3.55
3103 3258 6.163135 AGTTGTACTAAGCTTGAGACACTT 57.837 37.500 9.86 0.00 0.00 3.16
3104 3259 7.286215 AGTTGTACTAAGCTTGAGACACTTA 57.714 36.000 9.86 0.00 0.00 2.24
3105 3260 7.897864 AGTTGTACTAAGCTTGAGACACTTAT 58.102 34.615 9.86 0.00 0.00 1.73
3106 3261 8.368668 AGTTGTACTAAGCTTGAGACACTTATT 58.631 33.333 9.86 0.00 0.00 1.40
3107 3262 8.989980 GTTGTACTAAGCTTGAGACACTTATTT 58.010 33.333 9.86 0.00 0.00 1.40
3108 3263 9.555727 TTGTACTAAGCTTGAGACACTTATTTT 57.444 29.630 9.86 0.00 0.00 1.82
3109 3264 8.988934 TGTACTAAGCTTGAGACACTTATTTTG 58.011 33.333 9.86 0.00 0.00 2.44
3110 3265 7.440523 ACTAAGCTTGAGACACTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
3111 3266 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
3112 3267 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
3113 3268 5.574188 AGCTTGAGACACTTATTTTGGGAT 58.426 37.500 0.00 0.00 0.00 3.85
3114 3269 5.416952 AGCTTGAGACACTTATTTTGGGATG 59.583 40.000 0.00 0.00 0.00 3.51
3115 3270 5.393461 GCTTGAGACACTTATTTTGGGATGG 60.393 44.000 0.00 0.00 0.00 3.51
3116 3271 5.512942 TGAGACACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
3117 3272 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
3118 3273 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
3119 3274 4.292306 AGACACTTATTTTGGGATGGAGGT 59.708 41.667 0.00 0.00 0.00 3.85
3120 3275 5.491078 AGACACTTATTTTGGGATGGAGGTA 59.509 40.000 0.00 0.00 0.00 3.08
3121 3276 5.755849 ACACTTATTTTGGGATGGAGGTAG 58.244 41.667 0.00 0.00 0.00 3.18
3131 3286 3.773119 GGGATGGAGGTAGTACTTGACAA 59.227 47.826 0.00 0.00 0.00 3.18
3185 3341 6.127730 GGGTAAAACATAGTGGTTCAGAATGG 60.128 42.308 0.00 0.00 36.16 3.16
3207 3363 4.304939 GTGGTCTAGAGTAAAACAAGCGT 58.695 43.478 0.00 0.00 0.00 5.07
3208 3364 5.464168 GTGGTCTAGAGTAAAACAAGCGTA 58.536 41.667 0.00 0.00 0.00 4.42
3209 3365 5.344396 GTGGTCTAGAGTAAAACAAGCGTAC 59.656 44.000 0.00 0.00 0.00 3.67
3211 3367 5.572126 GGTCTAGAGTAAAACAAGCGTACTG 59.428 44.000 0.00 0.00 0.00 2.74
3212 3368 5.060693 GTCTAGAGTAAAACAAGCGTACTGC 59.939 44.000 0.00 2.08 46.98 4.40
3236 3393 0.249073 CCGAGAGAGCAATGGTACCG 60.249 60.000 7.57 0.00 0.00 4.02
3238 3395 1.534175 CGAGAGAGCAATGGTACCGTC 60.534 57.143 7.19 0.00 0.00 4.79
3268 3425 1.066858 TGAGGTAGCAGCTGTAGCAAC 60.067 52.381 16.64 13.16 45.16 4.17
3274 3431 0.438830 GCAGCTGTAGCAACGTGTAC 59.561 55.000 16.64 0.00 45.16 2.90
3292 3516 5.330498 CGTGTACGTTGAAATTGCAGTTTTC 60.330 40.000 8.72 11.96 33.09 2.29
3509 3820 9.686683 AGCTAATCCACTACAAAGAATACAAAT 57.313 29.630 0.00 0.00 0.00 2.32
3571 3889 4.268405 CGCTTTCACATTTTCTTGTTTGCT 59.732 37.500 0.00 0.00 0.00 3.91
3585 3903 7.467557 TCTTGTTTGCTTTCTGCTTTTAATG 57.532 32.000 0.00 0.00 43.37 1.90
3672 3990 8.877864 AAAGTGGATTTTGTATCTTGGTATGA 57.122 30.769 0.00 0.00 0.00 2.15
3699 4017 5.831702 AATTACTGGTACTGACTACGGAG 57.168 43.478 0.00 0.00 0.00 4.63
3796 4114 4.202440 ACCTGCTATTATTGCTGCTCTGAT 60.202 41.667 0.00 0.00 0.00 2.90
3804 4122 6.668541 TTATTGCTGCTCTGATGTCTTTAC 57.331 37.500 0.00 0.00 0.00 2.01
4020 4338 7.169645 GCAGTGAGATTTTGTTAAGCAATTTCA 59.830 33.333 0.00 0.00 36.89 2.69
4033 4361 9.586435 GTTAAGCAATTTCATAATAAACTGGCT 57.414 29.630 0.00 0.00 0.00 4.75
4053 4381 1.610363 TTTGAATGCTGCCCGTGTTA 58.390 45.000 0.00 0.00 0.00 2.41
4080 4408 1.289160 TTGCTTGAGCCCATCTACCT 58.711 50.000 0.00 0.00 41.18 3.08
4083 4411 2.435805 TGCTTGAGCCCATCTACCTAAG 59.564 50.000 0.00 0.00 41.18 2.18
4201 4529 3.194968 CGGAGTATGGCCTCGGTATAAAT 59.805 47.826 3.32 0.00 31.98 1.40
4315 4643 7.255070 GCTCTGTTTCCCATTAATTCATCTCTC 60.255 40.741 0.00 0.00 0.00 3.20
4352 4680 2.591923 TGTGGAACATGGCAGCTTTTA 58.408 42.857 0.00 0.00 45.67 1.52
4356 4684 5.421693 TGTGGAACATGGCAGCTTTTATTAT 59.578 36.000 0.00 0.00 45.67 1.28
4365 4693 7.328277 TGGCAGCTTTTATTATATCGTGTTT 57.672 32.000 0.00 0.00 0.00 2.83
4415 4744 2.552093 ATATATCCGAGGACCTGGGG 57.448 55.000 21.41 11.81 30.11 4.96
4572 4901 6.942576 AGATGTAACATTCCTTAAGTGCACTT 59.057 34.615 32.97 32.97 39.85 3.16
4577 4906 9.738832 GTAACATTCCTTAAGTGCACTTAAAAA 57.261 29.630 37.97 33.56 44.83 1.94
4580 4909 8.421002 ACATTCCTTAAGTGCACTTAAAAATGT 58.579 29.630 41.00 41.00 45.53 2.71
4672 5001 5.687285 GGTGTATGAGAAGCAACAAAAGTTG 59.313 40.000 4.10 4.10 37.39 3.16
4885 5254 3.190118 GTGCAGGTCTCAATTTCTTCAGG 59.810 47.826 0.00 0.00 0.00 3.86
4996 5365 2.158842 ATCTGTCAAGATAGCCACAGGC 60.159 50.000 0.00 0.00 41.57 4.85
5018 5387 5.353400 GGCCAGTGACTTAAACCTGTAATAC 59.647 44.000 0.00 0.00 0.00 1.89
5068 5437 4.018779 TGACAAATTTCGTCTATCCCCCTT 60.019 41.667 16.46 0.00 34.37 3.95
5234 5603 4.349663 TGCATAACAAGGTTCGTATTGC 57.650 40.909 0.00 0.00 0.00 3.56
5328 5697 3.824133 TGGTCAATATGCATTCTCTGGG 58.176 45.455 3.54 0.00 0.00 4.45
5688 6057 7.588143 ACTCATGCGTTTATATCTATTCAGC 57.412 36.000 0.00 0.00 0.00 4.26
5719 6088 8.627403 AGTAGTTGAGCAATTATTGATGGATTG 58.373 33.333 9.36 0.00 34.67 2.67
5977 6346 8.396390 CACCTTGATTAACTTTGATCTGATCTG 58.604 37.037 17.82 10.65 0.00 2.90
6058 6427 7.637548 TGGATATAAGGATGGATATGGATGG 57.362 40.000 0.00 0.00 0.00 3.51
6150 6521 2.887152 AGCTTTCTTTCCCACATCACAC 59.113 45.455 0.00 0.00 0.00 3.82
6157 6528 4.346709 TCTTTCCCACATCACACTGTCTTA 59.653 41.667 0.00 0.00 0.00 2.10
6252 6623 8.200792 TCTTCTATGCTAGGTTGAAGAATCTTC 58.799 37.037 15.62 15.62 39.74 2.87
6337 6708 8.975410 TGCATTTCATTGTAAGAGAATTCAAG 57.025 30.769 8.44 0.00 0.00 3.02
6516 6887 2.790433 TGGTGATAAGCAAGTGGGAAC 58.210 47.619 0.00 0.00 0.00 3.62
6517 6888 1.737793 GGTGATAAGCAAGTGGGAACG 59.262 52.381 0.00 0.00 0.00 3.95
6590 6961 5.515008 GGAGACCCCAAAGTATTCTTCTTGT 60.515 44.000 0.00 0.00 32.90 3.16
6870 7241 9.667989 TGCATCTGAAAATAACAATGAATATCG 57.332 29.630 0.00 0.00 0.00 2.92
6900 7271 4.248058 CAATGTATCTGACAGCACACTCA 58.752 43.478 10.73 0.30 42.79 3.41
7005 7376 9.202273 GAGGTATACATCAGCTTCTTAAATCTG 57.798 37.037 12.50 0.00 31.31 2.90
7025 7398 7.744087 ATCTGAAATGTTACTGTAGCAACAA 57.256 32.000 8.43 2.95 38.11 2.83
7030 7403 9.278978 TGAAATGTTACTGTAGCAACAATTCTA 57.721 29.630 19.04 8.99 41.71 2.10
7108 7481 7.148323 GCATACATATTTACAGTGACAACACCA 60.148 37.037 0.00 0.00 46.99 4.17
7124 7497 1.068588 CACCACCAGAACAAGAGTCGA 59.931 52.381 0.00 0.00 0.00 4.20
7150 7523 0.176680 AACAGCTAGTCCATCGCCTG 59.823 55.000 0.00 0.00 0.00 4.85
7246 7619 1.063174 GCCGATGTCTTTCATGCAGTC 59.937 52.381 0.00 0.00 36.83 3.51
7407 7784 4.717313 GACGGCCAAGGGACACCC 62.717 72.222 2.24 0.00 45.90 4.61
7721 8103 0.173708 TGTTCAACCCGCAAACAACC 59.826 50.000 0.00 0.00 30.39 3.77
7734 8116 5.174216 CCGCAAACAACCTAACATTTTGTAC 59.826 40.000 0.00 0.00 33.10 2.90
7769 8151 8.477419 TCCAAAGTTTTAAATCTGGATCACTT 57.523 30.769 0.00 0.00 0.00 3.16
7855 8237 6.686630 TGTTGAGTTTGACTTGACACAAATT 58.313 32.000 0.00 0.00 38.09 1.82
7905 8287 2.354821 GGAGTATTTTGTCGGGATGTGC 59.645 50.000 0.00 0.00 0.00 4.57
7911 8293 0.589223 TTGTCGGGATGTGCGAAAAC 59.411 50.000 0.00 0.00 0.00 2.43
7918 8300 3.363970 CGGGATGTGCGAAAACTATATGC 60.364 47.826 0.00 0.00 0.00 3.14
7924 8306 8.830580 GGATGTGCGAAAACTATATGCATATAT 58.169 33.333 23.42 11.26 37.48 0.86
8008 8390 8.154649 TCTAGCTGAAGTTAAAGGTCAAAAAG 57.845 34.615 0.00 0.00 0.00 2.27
8025 8407 8.244113 GGTCAAAAAGAATTTGGGTATGTCTAG 58.756 37.037 1.52 0.00 39.02 2.43
8029 8411 4.694339 AGAATTTGGGTATGTCTAGACGC 58.306 43.478 17.85 10.29 0.00 5.19
8040 8422 4.811969 TGTCTAGACGCCATTCCTTTTA 57.188 40.909 17.85 0.00 0.00 1.52
8049 8431 4.929211 ACGCCATTCCTTTTAAAAATCAGC 59.071 37.500 1.66 0.63 0.00 4.26
8162 8544 6.696825 GGTAGTAGAAACTAACGACCAAAC 57.303 41.667 0.00 0.00 39.90 2.93
8184 8566 8.648968 CAAACTTTGTATTTAAAAACCGTGTGT 58.351 29.630 0.00 0.00 0.00 3.72
8199 8581 5.464168 ACCGTGTGTACAATGTAGAGTAAC 58.536 41.667 0.00 0.00 0.00 2.50
8201 8583 5.921976 CCGTGTGTACAATGTAGAGTAACAA 59.078 40.000 0.00 0.00 32.02 2.83
8202 8584 6.129009 CCGTGTGTACAATGTAGAGTAACAAC 60.129 42.308 0.00 0.00 32.02 3.32
8203 8585 6.398205 CGTGTGTACAATGTAGAGTAACAACG 60.398 42.308 0.00 0.37 32.02 4.10
8204 8586 6.638063 GTGTGTACAATGTAGAGTAACAACGA 59.362 38.462 0.00 0.00 32.02 3.85
8205 8587 7.327761 GTGTGTACAATGTAGAGTAACAACGAT 59.672 37.037 0.00 0.00 32.02 3.73
8206 8588 7.327518 TGTGTACAATGTAGAGTAACAACGATG 59.672 37.037 0.00 0.00 32.02 3.84
8207 8589 7.539710 GTGTACAATGTAGAGTAACAACGATGA 59.460 37.037 0.00 0.00 32.02 2.92
8208 8590 7.753580 TGTACAATGTAGAGTAACAACGATGAG 59.246 37.037 0.00 0.00 32.02 2.90
8209 8591 6.100004 ACAATGTAGAGTAACAACGATGAGG 58.900 40.000 0.00 0.00 32.02 3.86
8210 8592 4.106029 TGTAGAGTAACAACGATGAGGC 57.894 45.455 0.00 0.00 0.00 4.70
8211 8593 3.762288 TGTAGAGTAACAACGATGAGGCT 59.238 43.478 0.00 0.00 0.00 4.58
8212 8594 3.512033 AGAGTAACAACGATGAGGCTC 57.488 47.619 7.79 7.79 0.00 4.70
8213 8595 2.166664 AGAGTAACAACGATGAGGCTCC 59.833 50.000 12.86 0.00 0.00 4.70
8214 8596 1.207329 AGTAACAACGATGAGGCTCCC 59.793 52.381 12.86 2.90 0.00 4.30
8215 8597 1.066430 GTAACAACGATGAGGCTCCCA 60.066 52.381 12.86 0.00 0.00 4.37
8216 8598 0.620556 AACAACGATGAGGCTCCCAT 59.379 50.000 12.86 0.00 0.00 4.00
8217 8599 0.107508 ACAACGATGAGGCTCCCATG 60.108 55.000 12.86 6.68 0.00 3.66
8218 8600 1.153086 AACGATGAGGCTCCCATGC 60.153 57.895 12.86 0.00 0.00 4.06
8219 8601 1.913951 AACGATGAGGCTCCCATGCA 61.914 55.000 12.86 0.00 34.04 3.96
8220 8602 1.153107 CGATGAGGCTCCCATGCAA 60.153 57.895 12.86 0.00 34.04 4.08
8221 8603 0.749091 CGATGAGGCTCCCATGCAAA 60.749 55.000 12.86 0.00 34.04 3.68
8222 8604 0.743097 GATGAGGCTCCCATGCAAAC 59.257 55.000 12.86 0.00 34.04 2.93
8223 8605 1.033746 ATGAGGCTCCCATGCAAACG 61.034 55.000 12.86 0.00 34.04 3.60
8224 8606 2.361610 AGGCTCCCATGCAAACGG 60.362 61.111 0.00 0.00 34.04 4.44
8225 8607 2.361104 GGCTCCCATGCAAACGGA 60.361 61.111 0.00 0.00 34.04 4.69
8226 8608 1.754234 GGCTCCCATGCAAACGGAT 60.754 57.895 0.00 0.00 34.04 4.18
8227 8609 1.434696 GCTCCCATGCAAACGGATG 59.565 57.895 0.00 0.00 0.00 3.51
8228 8610 1.031571 GCTCCCATGCAAACGGATGA 61.032 55.000 0.00 0.00 0.00 2.92
8229 8611 1.462616 CTCCCATGCAAACGGATGAA 58.537 50.000 0.00 0.00 0.00 2.57
8230 8612 1.818060 CTCCCATGCAAACGGATGAAA 59.182 47.619 0.00 0.00 0.00 2.69
8231 8613 2.428171 CTCCCATGCAAACGGATGAAAT 59.572 45.455 0.00 0.00 0.00 2.17
8232 8614 3.625853 TCCCATGCAAACGGATGAAATA 58.374 40.909 0.00 0.00 0.00 1.40
8233 8615 4.019858 TCCCATGCAAACGGATGAAATAA 58.980 39.130 0.00 0.00 0.00 1.40
8234 8616 4.097741 TCCCATGCAAACGGATGAAATAAG 59.902 41.667 0.00 0.00 0.00 1.73
8235 8617 3.798337 CCATGCAAACGGATGAAATAAGC 59.202 43.478 0.00 0.00 0.00 3.09
8236 8618 3.129852 TGCAAACGGATGAAATAAGCG 57.870 42.857 0.00 0.00 0.00 4.68
8237 8619 1.846175 GCAAACGGATGAAATAAGCGC 59.154 47.619 0.00 0.00 0.00 5.92
8238 8620 2.730715 GCAAACGGATGAAATAAGCGCA 60.731 45.455 11.47 0.00 0.00 6.09
8239 8621 3.100817 CAAACGGATGAAATAAGCGCAG 58.899 45.455 11.47 0.00 0.00 5.18
8240 8622 2.309528 ACGGATGAAATAAGCGCAGA 57.690 45.000 11.47 0.00 0.00 4.26
8241 8623 1.933853 ACGGATGAAATAAGCGCAGAC 59.066 47.619 11.47 0.00 0.00 3.51
8242 8624 1.071239 CGGATGAAATAAGCGCAGACG 60.071 52.381 11.47 0.00 44.07 4.18
8243 8625 2.201732 GGATGAAATAAGCGCAGACGA 58.798 47.619 11.47 0.00 43.93 4.20
8244 8626 2.219674 GGATGAAATAAGCGCAGACGAG 59.780 50.000 11.47 0.00 43.93 4.18
8245 8627 0.999406 TGAAATAAGCGCAGACGAGC 59.001 50.000 11.47 0.00 43.93 5.03
8246 8628 0.999406 GAAATAAGCGCAGACGAGCA 59.001 50.000 11.47 0.00 43.93 4.26
8247 8629 1.002366 AAATAAGCGCAGACGAGCAG 58.998 50.000 11.47 0.00 43.93 4.24
8248 8630 0.807667 AATAAGCGCAGACGAGCAGG 60.808 55.000 11.47 0.00 43.93 4.85
8249 8631 3.989698 TAAGCGCAGACGAGCAGGC 62.990 63.158 11.47 0.00 43.93 4.85
8271 8653 2.442084 CGCACACGGAGAGTTAACC 58.558 57.895 0.88 0.00 34.97 2.85
8278 8660 3.437746 GGAGAGTTAACCGACAGGC 57.562 57.895 0.88 0.00 42.76 4.85
8279 8661 0.458025 GGAGAGTTAACCGACAGGCG 60.458 60.000 0.88 0.00 42.76 5.52
8280 8662 0.524862 GAGAGTTAACCGACAGGCGA 59.475 55.000 0.00 0.00 44.57 5.54
8281 8663 0.243095 AGAGTTAACCGACAGGCGAC 59.757 55.000 0.00 0.00 44.57 5.19
8282 8664 0.038892 GAGTTAACCGACAGGCGACA 60.039 55.000 0.00 0.00 44.57 4.35
8283 8665 0.038526 AGTTAACCGACAGGCGACAG 60.039 55.000 0.00 0.00 44.57 3.51
8284 8666 0.038892 GTTAACCGACAGGCGACAGA 60.039 55.000 0.00 0.00 44.57 3.41
8285 8667 0.892755 TTAACCGACAGGCGACAGAT 59.107 50.000 0.00 0.00 44.57 2.90
8286 8668 1.753930 TAACCGACAGGCGACAGATA 58.246 50.000 0.00 0.00 44.57 1.98
8287 8669 0.892755 AACCGACAGGCGACAGATAA 59.107 50.000 0.00 0.00 44.57 1.75
8288 8670 0.892755 ACCGACAGGCGACAGATAAA 59.107 50.000 0.00 0.00 44.57 1.40
8289 8671 1.274167 ACCGACAGGCGACAGATAAAA 59.726 47.619 0.00 0.00 44.57 1.52
8290 8672 1.659098 CCGACAGGCGACAGATAAAAC 59.341 52.381 0.00 0.00 44.57 2.43
8291 8673 2.607187 CGACAGGCGACAGATAAAACT 58.393 47.619 0.00 0.00 44.57 2.66
8292 8674 3.428452 CCGACAGGCGACAGATAAAACTA 60.428 47.826 0.00 0.00 44.57 2.24
8293 8675 4.360563 CGACAGGCGACAGATAAAACTAT 58.639 43.478 0.00 0.00 44.57 2.12
8294 8676 4.207224 CGACAGGCGACAGATAAAACTATG 59.793 45.833 0.00 0.00 44.57 2.23
8295 8677 5.339008 ACAGGCGACAGATAAAACTATGA 57.661 39.130 0.00 0.00 0.00 2.15
8296 8678 5.918608 ACAGGCGACAGATAAAACTATGAT 58.081 37.500 0.00 0.00 0.00 2.45
8297 8679 7.050970 ACAGGCGACAGATAAAACTATGATA 57.949 36.000 0.00 0.00 0.00 2.15
8298 8680 7.497595 ACAGGCGACAGATAAAACTATGATAA 58.502 34.615 0.00 0.00 0.00 1.75
8299 8681 7.653713 ACAGGCGACAGATAAAACTATGATAAG 59.346 37.037 0.00 0.00 0.00 1.73
8300 8682 7.653713 CAGGCGACAGATAAAACTATGATAAGT 59.346 37.037 0.00 0.00 0.00 2.24
8301 8683 8.204836 AGGCGACAGATAAAACTATGATAAGTT 58.795 33.333 0.00 0.00 41.46 2.66
8302 8684 8.276325 GGCGACAGATAAAACTATGATAAGTTG 58.724 37.037 0.00 0.00 39.62 3.16
8303 8685 9.031360 GCGACAGATAAAACTATGATAAGTTGA 57.969 33.333 0.00 0.00 39.62 3.18
8313 8695 8.425577 AACTATGATAAGTTGATCAAAGACCG 57.574 34.615 10.35 0.00 39.25 4.79
8314 8696 7.556844 ACTATGATAAGTTGATCAAAGACCGT 58.443 34.615 10.35 0.00 39.25 4.83
8315 8697 6.668541 ATGATAAGTTGATCAAAGACCGTG 57.331 37.500 10.35 0.00 39.25 4.94
8316 8698 5.789521 TGATAAGTTGATCAAAGACCGTGA 58.210 37.500 10.35 0.00 32.84 4.35
8317 8699 6.406370 TGATAAGTTGATCAAAGACCGTGAT 58.594 36.000 10.35 0.00 38.44 3.06
8318 8700 6.878923 TGATAAGTTGATCAAAGACCGTGATT 59.121 34.615 10.35 0.00 35.84 2.57
8319 8701 7.390440 TGATAAGTTGATCAAAGACCGTGATTT 59.610 33.333 10.35 0.00 35.84 2.17
8320 8702 8.786826 ATAAGTTGATCAAAGACCGTGATTTA 57.213 30.769 10.35 0.00 35.84 1.40
8321 8703 6.481954 AGTTGATCAAAGACCGTGATTTAC 57.518 37.500 10.35 0.00 35.84 2.01
8346 8728 2.628106 GCATAGGCGACATGTGCG 59.372 61.111 1.15 8.23 0.00 5.34
8347 8729 1.882625 GCATAGGCGACATGTGCGA 60.883 57.895 17.91 8.28 0.00 5.10
8348 8730 1.927210 CATAGGCGACATGTGCGAC 59.073 57.895 17.91 15.80 36.94 5.19
8350 8732 2.484558 TAGGCGACATGTGCGACTA 58.515 52.632 21.68 21.68 46.97 2.59
8351 8733 0.812549 TAGGCGACATGTGCGACTAA 59.187 50.000 22.67 11.81 46.97 2.24
8352 8734 0.736325 AGGCGACATGTGCGACTAAC 60.736 55.000 20.01 4.71 46.97 2.34
8353 8735 1.011968 GGCGACATGTGCGACTAACA 61.012 55.000 17.91 0.00 33.04 2.41
8354 8736 0.366871 GCGACATGTGCGACTAACAG 59.633 55.000 17.91 0.00 0.00 3.16
8355 8737 1.698165 CGACATGTGCGACTAACAGT 58.302 50.000 1.15 0.00 0.00 3.55
8356 8738 1.386748 CGACATGTGCGACTAACAGTG 59.613 52.381 1.15 0.00 0.00 3.66
8357 8739 2.404215 GACATGTGCGACTAACAGTGT 58.596 47.619 1.15 0.00 0.00 3.55
8358 8740 3.571571 GACATGTGCGACTAACAGTGTA 58.428 45.455 1.15 0.00 0.00 2.90
8359 8741 3.314553 ACATGTGCGACTAACAGTGTAC 58.685 45.455 0.00 0.00 0.00 2.90
8360 8742 3.005472 ACATGTGCGACTAACAGTGTACT 59.995 43.478 0.00 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.379339 TGCACGTGTATGATTACTAGCA 57.621 40.909 18.38 0.31 0.00 3.49
5 6 5.670097 CATTGCACGTGTATGATTACTAGC 58.330 41.667 18.38 0.00 0.00 3.42
15 16 4.335037 TCATAACATGCATTGCACGTGTAT 59.665 37.500 18.38 9.53 43.04 2.29
17 18 2.487372 TCATAACATGCATTGCACGTGT 59.513 40.909 18.38 12.66 43.04 4.49
18 19 3.134021 TCATAACATGCATTGCACGTG 57.866 42.857 14.66 12.28 43.04 4.49
23 24 7.933728 TTTGTGATATCATAACATGCATTGC 57.066 32.000 13.81 0.46 0.00 3.56
46 47 9.669353 CTAATGCGCAATGAAGTTAATATCTTT 57.331 29.630 17.11 0.00 0.00 2.52
51 52 8.657074 ACTACTAATGCGCAATGAAGTTAATA 57.343 30.769 17.11 0.28 0.00 0.98
53 54 6.978343 ACTACTAATGCGCAATGAAGTTAA 57.022 33.333 17.11 0.89 0.00 2.01
57 58 7.148573 CCCTAATACTACTAATGCGCAATGAAG 60.149 40.741 17.11 12.10 0.00 3.02
59 60 6.014925 TCCCTAATACTACTAATGCGCAATGA 60.015 38.462 17.11 0.78 0.00 2.57
65 66 8.926710 CATCTTTTCCCTAATACTACTAATGCG 58.073 37.037 0.00 0.00 0.00 4.73
66 67 9.780186 ACATCTTTTCCCTAATACTACTAATGC 57.220 33.333 0.00 0.00 0.00 3.56
86 87 8.635765 ACCTAATATCAACACACAAACATCTT 57.364 30.769 0.00 0.00 0.00 2.40
88 89 9.378551 TCTACCTAATATCAACACACAAACATC 57.621 33.333 0.00 0.00 0.00 3.06
164 167 2.483876 ACATCCTGCCGAATATCAACG 58.516 47.619 0.00 0.00 0.00 4.10
167 170 4.955811 AACTACATCCTGCCGAATATCA 57.044 40.909 0.00 0.00 0.00 2.15
174 177 1.556564 CACGTAACTACATCCTGCCG 58.443 55.000 0.00 0.00 0.00 5.69
177 180 5.898174 TGATAACCACGTAACTACATCCTG 58.102 41.667 0.00 0.00 0.00 3.86
182 185 5.816449 TCGATGATAACCACGTAACTACA 57.184 39.130 0.00 0.00 0.00 2.74
558 561 9.302345 CGTATGTAGTAGTCATTTGAAATGTCT 57.698 33.333 18.62 18.62 0.00 3.41
559 562 8.540492 CCGTATGTAGTAGTCATTTGAAATGTC 58.460 37.037 16.62 11.74 0.00 3.06
560 563 8.255206 TCCGTATGTAGTAGTCATTTGAAATGT 58.745 33.333 16.62 2.38 0.00 2.71
561 564 8.642908 TCCGTATGTAGTAGTCATTTGAAATG 57.357 34.615 11.54 11.54 0.00 2.32
562 565 9.261180 CATCCGTATGTAGTAGTCATTTGAAAT 57.739 33.333 0.00 0.00 0.00 2.17
563 566 8.255206 ACATCCGTATGTAGTAGTCATTTGAAA 58.745 33.333 0.00 0.00 44.66 2.69
564 567 7.778083 ACATCCGTATGTAGTAGTCATTTGAA 58.222 34.615 0.00 0.00 44.66 2.69
565 568 7.342769 ACATCCGTATGTAGTAGTCATTTGA 57.657 36.000 0.00 0.00 44.66 2.69
608 611 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
609 612 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
610 613 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
611 614 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
612 615 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
613 616 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
614 617 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
615 618 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
616 619 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
617 620 4.260375 GCTACATACGGAGCAAAATGAGTG 60.260 45.833 0.00 0.00 38.62 3.51
618 621 3.871594 GCTACATACGGAGCAAAATGAGT 59.128 43.478 0.00 0.00 38.62 3.41
619 622 3.248602 GGCTACATACGGAGCAAAATGAG 59.751 47.826 0.00 0.00 40.64 2.90
620 623 3.202906 GGCTACATACGGAGCAAAATGA 58.797 45.455 0.00 0.00 40.64 2.57
621 624 2.942376 TGGCTACATACGGAGCAAAATG 59.058 45.455 0.00 0.00 40.64 2.32
622 625 2.943033 GTGGCTACATACGGAGCAAAAT 59.057 45.455 0.00 0.00 40.64 1.82
623 626 2.027561 AGTGGCTACATACGGAGCAAAA 60.028 45.455 2.02 0.00 40.64 2.44
624 627 1.553248 AGTGGCTACATACGGAGCAAA 59.447 47.619 2.02 0.00 40.64 3.68
625 628 1.191535 AGTGGCTACATACGGAGCAA 58.808 50.000 2.02 0.00 40.64 3.91
626 629 1.191535 AAGTGGCTACATACGGAGCA 58.808 50.000 2.02 0.00 40.64 4.26
627 630 3.662247 ATAAGTGGCTACATACGGAGC 57.338 47.619 2.02 0.00 38.00 4.70
628 631 5.196341 TCAATAAGTGGCTACATACGGAG 57.804 43.478 2.02 0.00 0.00 4.63
629 632 5.601583 TTCAATAAGTGGCTACATACGGA 57.398 39.130 2.02 0.00 0.00 4.69
630 633 6.481976 TCATTTCAATAAGTGGCTACATACGG 59.518 38.462 2.02 0.00 0.00 4.02
631 634 7.224753 AGTCATTTCAATAAGTGGCTACATACG 59.775 37.037 2.02 0.00 35.71 3.06
632 635 8.438676 AGTCATTTCAATAAGTGGCTACATAC 57.561 34.615 2.02 0.00 35.71 2.39
633 636 9.764363 CTAGTCATTTCAATAAGTGGCTACATA 57.236 33.333 2.02 0.00 38.18 2.29
634 637 8.486210 TCTAGTCATTTCAATAAGTGGCTACAT 58.514 33.333 2.02 0.00 38.18 2.29
635 638 7.847096 TCTAGTCATTTCAATAAGTGGCTACA 58.153 34.615 2.02 0.00 38.18 2.74
636 639 8.718102 TTCTAGTCATTTCAATAAGTGGCTAC 57.282 34.615 0.00 0.00 38.18 3.58
637 640 9.383519 CTTTCTAGTCATTTCAATAAGTGGCTA 57.616 33.333 0.00 0.00 38.18 3.93
638 641 8.103305 TCTTTCTAGTCATTTCAATAAGTGGCT 58.897 33.333 0.00 0.00 40.09 4.75
639 642 8.178313 GTCTTTCTAGTCATTTCAATAAGTGGC 58.822 37.037 0.00 0.00 0.00 5.01
640 643 9.219603 TGTCTTTCTAGTCATTTCAATAAGTGG 57.780 33.333 0.00 0.00 0.00 4.00
653 656 9.924650 GTTCCTAAATACTTGTCTTTCTAGTCA 57.075 33.333 0.00 0.00 34.37 3.41
654 657 9.074443 CGTTCCTAAATACTTGTCTTTCTAGTC 57.926 37.037 0.00 0.00 34.37 2.59
655 658 8.033626 CCGTTCCTAAATACTTGTCTTTCTAGT 58.966 37.037 0.00 0.00 36.28 2.57
656 659 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
657 660 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
658 661 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
659 662 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
660 663 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
661 664 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
662 665 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
663 666 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
664 667 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
665 668 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
666 669 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
667 670 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
668 671 5.537674 TCATACTCCCTCCGTTCCTAAATAC 59.462 44.000 0.00 0.00 0.00 1.89
669 672 5.708544 TCATACTCCCTCCGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
670 673 4.553678 TCATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
671 674 3.985127 TCATACTCCCTCCGTTCCTAAA 58.015 45.455 0.00 0.00 0.00 1.85
672 675 3.675348 TCATACTCCCTCCGTTCCTAA 57.325 47.619 0.00 0.00 0.00 2.69
673 676 3.897657 ATCATACTCCCTCCGTTCCTA 57.102 47.619 0.00 0.00 0.00 2.94
674 677 2.777459 ATCATACTCCCTCCGTTCCT 57.223 50.000 0.00 0.00 0.00 3.36
675 678 3.840124 AAATCATACTCCCTCCGTTCC 57.160 47.619 0.00 0.00 0.00 3.62
676 679 5.532664 ACTAAATCATACTCCCTCCGTTC 57.467 43.478 0.00 0.00 0.00 3.95
677 680 5.671493 CAACTAAATCATACTCCCTCCGTT 58.329 41.667 0.00 0.00 0.00 4.44
678 681 4.443034 GCAACTAAATCATACTCCCTCCGT 60.443 45.833 0.00 0.00 0.00 4.69
679 682 4.058817 GCAACTAAATCATACTCCCTCCG 58.941 47.826 0.00 0.00 0.00 4.63
680 683 4.816925 GTGCAACTAAATCATACTCCCTCC 59.183 45.833 0.00 0.00 0.00 4.30
681 684 4.508124 CGTGCAACTAAATCATACTCCCTC 59.492 45.833 0.00 0.00 31.75 4.30
682 685 4.442706 CGTGCAACTAAATCATACTCCCT 58.557 43.478 0.00 0.00 31.75 4.20
683 686 3.002348 GCGTGCAACTAAATCATACTCCC 59.998 47.826 0.00 0.00 31.75 4.30
684 687 3.871594 AGCGTGCAACTAAATCATACTCC 59.128 43.478 0.00 0.00 31.75 3.85
685 688 6.583912 TTAGCGTGCAACTAAATCATACTC 57.416 37.500 7.76 0.00 31.75 2.59
686 689 6.978343 TTTAGCGTGCAACTAAATCATACT 57.022 33.333 15.66 0.00 35.28 2.12
690 693 5.683743 GTGTTTTTAGCGTGCAACTAAATCA 59.316 36.000 18.75 17.25 38.89 2.57
721 724 4.082949 CGCGTCTATCCAATGGTCTATGTA 60.083 45.833 0.00 0.00 0.00 2.29
745 748 1.450312 CCCATCTCACCCGCTCAAC 60.450 63.158 0.00 0.00 0.00 3.18
750 753 1.476007 ATCTAGCCCATCTCACCCGC 61.476 60.000 0.00 0.00 0.00 6.13
762 765 1.482278 CGAGTTGCGAAGATCTAGCC 58.518 55.000 17.23 6.11 44.57 3.93
820 860 9.995003 ACACATTGTATAATCCAAAACAAATGT 57.005 25.926 0.00 0.00 35.63 2.71
883 950 7.138054 ACCCTTCCGTCTTGAATTATAAGAT 57.862 36.000 7.62 0.00 36.63 2.40
884 951 6.555463 ACCCTTCCGTCTTGAATTATAAGA 57.445 37.500 1.56 1.56 32.08 2.10
885 952 7.270047 TGTACCCTTCCGTCTTGAATTATAAG 58.730 38.462 0.00 0.00 0.00 1.73
886 953 7.185318 TGTACCCTTCCGTCTTGAATTATAA 57.815 36.000 0.00 0.00 0.00 0.98
891 958 4.261801 CATTGTACCCTTCCGTCTTGAAT 58.738 43.478 0.00 0.00 0.00 2.57
894 961 2.356135 CCATTGTACCCTTCCGTCTTG 58.644 52.381 0.00 0.00 0.00 3.02
896 963 0.909623 CCCATTGTACCCTTCCGTCT 59.090 55.000 0.00 0.00 0.00 4.18
897 964 0.746923 GCCCATTGTACCCTTCCGTC 60.747 60.000 0.00 0.00 0.00 4.79
911 1010 1.422531 TTTGGAAGCTTTGTGCCCAT 58.577 45.000 0.00 0.00 44.23 4.00
913 1012 1.138859 ACTTTTGGAAGCTTTGTGCCC 59.861 47.619 0.00 0.00 44.23 5.36
941 1040 2.093658 GTGTAGGTATGTGGACTGTGGG 60.094 54.545 0.00 0.00 0.00 4.61
954 1053 0.325296 CCCCTGGAGCTGTGTAGGTA 60.325 60.000 0.00 0.00 34.13 3.08
958 1059 1.918293 CCACCCCTGGAGCTGTGTA 60.918 63.158 0.00 0.00 40.55 2.90
975 1079 0.673985 GACCAAGCTGTTTTCCACCC 59.326 55.000 0.00 0.00 0.00 4.61
1027 1131 2.425592 CGGACTTCTGTGTGGGCA 59.574 61.111 0.00 0.00 0.00 5.36
1127 1232 2.564947 AGGCGTTCAGAATCAGAAGAGT 59.435 45.455 0.00 0.00 0.00 3.24
1181 1289 2.520741 GAGGAGGAGGAGGAGGCG 60.521 72.222 0.00 0.00 0.00 5.52
1182 1290 2.123033 GGAGGAGGAGGAGGAGGC 60.123 72.222 0.00 0.00 0.00 4.70
1183 1291 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
1188 1296 1.585651 GGTCTGGAGGAGGAGGAGGA 61.586 65.000 0.00 0.00 0.00 3.71
1304 1412 1.294138 CGAACGGGCAAGGTAGGAA 59.706 57.895 0.00 0.00 0.00 3.36
1309 1417 0.535553 TAAAAGCGAACGGGCAAGGT 60.536 50.000 0.00 0.00 34.64 3.50
1317 1425 4.546456 CGCAGAAGTAGATAAAAGCGAACG 60.546 45.833 0.00 0.00 46.01 3.95
1335 1443 1.351430 GCGTATCAACACAGCGCAGA 61.351 55.000 11.47 0.00 46.23 4.26
1336 1444 1.059369 GCGTATCAACACAGCGCAG 59.941 57.895 11.47 3.33 46.23 5.18
1337 1445 3.164576 GCGTATCAACACAGCGCA 58.835 55.556 11.47 0.00 46.23 6.09
1338 1446 2.399611 GGCGTATCAACACAGCGC 59.600 61.111 0.00 0.00 46.24 5.92
1339 1447 2.695055 CGGCGTATCAACACAGCG 59.305 61.111 0.00 0.00 0.00 5.18
1340 1448 2.025359 GAGCGGCGTATCAACACAGC 62.025 60.000 9.37 0.00 0.00 4.40
1341 1449 0.458543 AGAGCGGCGTATCAACACAG 60.459 55.000 9.37 0.00 0.00 3.66
1342 1450 0.735978 CAGAGCGGCGTATCAACACA 60.736 55.000 9.37 0.00 0.00 3.72
1343 1451 0.736325 ACAGAGCGGCGTATCAACAC 60.736 55.000 9.37 0.00 0.00 3.32
1344 1452 0.735978 CACAGAGCGGCGTATCAACA 60.736 55.000 9.37 0.00 0.00 3.33
1443 1564 0.527600 TCTCGAAACATGCCGGATCG 60.528 55.000 5.05 4.70 34.98 3.69
1449 1570 3.191371 ACTGGAAATTCTCGAAACATGCC 59.809 43.478 0.00 0.00 0.00 4.40
1452 1573 3.191371 GCCACTGGAAATTCTCGAAACAT 59.809 43.478 0.00 0.00 0.00 2.71
1506 1627 2.029020 GCTGGACCGACAGATATATGCA 60.029 50.000 0.00 0.00 40.97 3.96
1512 1633 2.832129 AGAAAAGCTGGACCGACAGATA 59.168 45.455 6.01 0.00 40.97 1.98
1519 1640 2.990066 ATCCTAGAAAAGCTGGACCG 57.010 50.000 0.00 0.00 30.20 4.79
1616 1750 9.624373 AAGAATGTGCATGTCTATAAGAAATCT 57.376 29.630 0.00 0.00 0.00 2.40
1671 1805 3.549467 TGCATCGCAGTCACGAAC 58.451 55.556 0.00 0.00 46.59 3.95
1847 1985 3.764466 CGCCGCACTCCCTCTTCT 61.764 66.667 0.00 0.00 0.00 2.85
1860 1998 2.099831 GTCGAGTACTGGACGCCG 59.900 66.667 20.31 7.59 0.00 6.46
1869 2007 0.171455 CCTGCTCCAGTGTCGAGTAC 59.829 60.000 0.00 0.00 0.00 2.73
1878 2016 2.289532 GCTCCAGACCTGCTCCAGT 61.290 63.158 0.00 0.00 0.00 4.00
1971 2109 1.634973 TCATCAAATGGCTGGGAGACA 59.365 47.619 0.00 0.00 37.84 3.41
2004 2142 1.728971 GACAAAGAGTCACGGCATGAG 59.271 52.381 0.00 0.00 46.77 2.90
2036 2174 2.568956 TCCTTTCCAGTGATGAGGACAG 59.431 50.000 0.00 0.00 31.71 3.51
2097 2235 8.836268 AATTTTGAACAGTTGATATGCATTGT 57.164 26.923 3.54 0.00 0.00 2.71
2175 2313 1.707427 AGGAAACAGACCTCCTGCAAT 59.293 47.619 0.00 0.00 46.81 3.56
2274 2412 9.974980 CAACTTACAAGGGAAAAAGCTTAATTA 57.025 29.630 0.00 0.00 0.00 1.40
2373 2513 5.510690 CGGGCTCTATCAATTGTGTATACCA 60.511 44.000 5.13 0.00 0.00 3.25
2388 2528 3.567478 AGAAGAAAATGCGGGCTCTAT 57.433 42.857 0.00 0.00 0.00 1.98
2396 2536 5.470845 AAGTATCCGAAGAAGAAAATGCG 57.529 39.130 0.00 0.00 0.00 4.73
2450 2590 6.456315 CGTTATATGAAATGGTCTGCGACAAA 60.456 38.462 10.14 0.06 33.68 2.83
2489 2629 7.436430 AAGTTTTAACTTACTTAGCTGGAGC 57.564 36.000 6.09 0.00 46.75 4.70
2639 2781 9.261180 CTATTGAAAGTCCGCATCTAAATAGAA 57.739 33.333 0.00 0.00 35.69 2.10
2652 2794 6.423905 TCAAAGACTGAACTATTGAAAGTCCG 59.576 38.462 0.00 0.00 38.40 4.79
2720 2868 8.210946 TCATTCTGTGGTCTTCTTCTTTCTAAA 58.789 33.333 0.00 0.00 0.00 1.85
2890 3038 1.300931 GAAGGCACTCGCAGTCACA 60.301 57.895 0.00 0.00 38.49 3.58
2908 3056 2.611751 TGAATATTCCAACGCCGATGTG 59.388 45.455 12.90 0.00 0.00 3.21
2913 3061 5.694910 ACTAGTTATGAATATTCCAACGCCG 59.305 40.000 12.90 11.52 0.00 6.46
2915 3063 8.138365 TCAACTAGTTATGAATATTCCAACGC 57.862 34.615 8.04 0.41 0.00 4.84
2994 3149 7.710896 AGGAAAATCTTTATACAGAAGCATGC 58.289 34.615 10.51 10.51 0.00 4.06
3015 3170 9.205513 GGACGGAGGGTATAATATAATTAGGAA 57.794 37.037 0.00 0.00 0.00 3.36
3028 3183 4.345837 CACTTATTTGGGACGGAGGGTATA 59.654 45.833 0.00 0.00 0.00 1.47
3029 3184 3.135895 CACTTATTTGGGACGGAGGGTAT 59.864 47.826 0.00 0.00 0.00 2.73
3030 3185 2.502538 CACTTATTTGGGACGGAGGGTA 59.497 50.000 0.00 0.00 0.00 3.69
3031 3186 1.280998 CACTTATTTGGGACGGAGGGT 59.719 52.381 0.00 0.00 0.00 4.34
3032 3187 1.280998 ACACTTATTTGGGACGGAGGG 59.719 52.381 0.00 0.00 0.00 4.30
3033 3188 2.781681 ACACTTATTTGGGACGGAGG 57.218 50.000 0.00 0.00 0.00 4.30
3034 3189 4.069304 TGAAACACTTATTTGGGACGGAG 58.931 43.478 0.00 0.00 0.00 4.63
3035 3190 4.088056 TGAAACACTTATTTGGGACGGA 57.912 40.909 0.00 0.00 0.00 4.69
3036 3191 4.277423 AGTTGAAACACTTATTTGGGACGG 59.723 41.667 0.00 0.00 0.00 4.79
3037 3192 5.432885 AGTTGAAACACTTATTTGGGACG 57.567 39.130 0.00 0.00 0.00 4.79
3038 3193 7.039270 ACAAAGTTGAAACACTTATTTGGGAC 58.961 34.615 0.00 0.00 35.87 4.46
3039 3194 7.176589 ACAAAGTTGAAACACTTATTTGGGA 57.823 32.000 0.00 0.00 35.87 4.37
3040 3195 8.194769 AGTACAAAGTTGAAACACTTATTTGGG 58.805 33.333 0.00 0.00 35.87 4.12
3075 3230 7.437267 GTGTCTCAAGCTTAGTACAACTTTGTA 59.563 37.037 0.00 0.00 42.35 2.41
3076 3231 6.258068 GTGTCTCAAGCTTAGTACAACTTTGT 59.742 38.462 0.00 0.00 44.86 2.83
3077 3232 6.480320 AGTGTCTCAAGCTTAGTACAACTTTG 59.520 38.462 0.00 0.00 0.00 2.77
3078 3233 6.583562 AGTGTCTCAAGCTTAGTACAACTTT 58.416 36.000 0.00 0.00 0.00 2.66
3079 3234 6.163135 AGTGTCTCAAGCTTAGTACAACTT 57.837 37.500 0.00 0.00 0.00 2.66
3080 3235 5.793030 AGTGTCTCAAGCTTAGTACAACT 57.207 39.130 0.00 0.00 0.00 3.16
3081 3236 8.535690 AATAAGTGTCTCAAGCTTAGTACAAC 57.464 34.615 0.00 0.00 0.00 3.32
3082 3237 9.555727 AAAATAAGTGTCTCAAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
3083 3238 8.988934 CAAAATAAGTGTCTCAAGCTTAGTACA 58.011 33.333 0.00 0.36 0.00 2.90
3084 3239 8.443937 CCAAAATAAGTGTCTCAAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
3085 3240 7.606456 CCCAAAATAAGTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
3086 3241 6.431234 CCCAAAATAAGTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
3087 3242 6.655003 TCCCAAAATAAGTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
3088 3243 6.539173 TCCCAAAATAAGTGTCTCAAGCTTA 58.461 36.000 0.00 0.00 0.00 3.09
3089 3244 5.385198 TCCCAAAATAAGTGTCTCAAGCTT 58.615 37.500 0.00 0.00 0.00 3.74
3090 3245 4.985538 TCCCAAAATAAGTGTCTCAAGCT 58.014 39.130 0.00 0.00 0.00 3.74
3091 3246 5.393461 CCATCCCAAAATAAGTGTCTCAAGC 60.393 44.000 0.00 0.00 0.00 4.01
3092 3247 5.945784 TCCATCCCAAAATAAGTGTCTCAAG 59.054 40.000 0.00 0.00 0.00 3.02
3093 3248 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
3094 3249 5.500234 CTCCATCCCAAAATAAGTGTCTCA 58.500 41.667 0.00 0.00 0.00 3.27
3095 3250 4.884164 CCTCCATCCCAAAATAAGTGTCTC 59.116 45.833 0.00 0.00 0.00 3.36
3096 3251 4.292306 ACCTCCATCCCAAAATAAGTGTCT 59.708 41.667 0.00 0.00 0.00 3.41
3097 3252 4.600062 ACCTCCATCCCAAAATAAGTGTC 58.400 43.478 0.00 0.00 0.00 3.67
3098 3253 4.675063 ACCTCCATCCCAAAATAAGTGT 57.325 40.909 0.00 0.00 0.00 3.55
3099 3254 5.755849 ACTACCTCCATCCCAAAATAAGTG 58.244 41.667 0.00 0.00 0.00 3.16
3100 3255 6.677076 AGTACTACCTCCATCCCAAAATAAGT 59.323 38.462 0.00 0.00 0.00 2.24
3101 3256 7.138054 AGTACTACCTCCATCCCAAAATAAG 57.862 40.000 0.00 0.00 0.00 1.73
3102 3257 7.183112 TCAAGTACTACCTCCATCCCAAAATAA 59.817 37.037 0.00 0.00 0.00 1.40
3103 3258 6.674861 TCAAGTACTACCTCCATCCCAAAATA 59.325 38.462 0.00 0.00 0.00 1.40
3104 3259 5.491078 TCAAGTACTACCTCCATCCCAAAAT 59.509 40.000 0.00 0.00 0.00 1.82
3105 3260 4.847512 TCAAGTACTACCTCCATCCCAAAA 59.152 41.667 0.00 0.00 0.00 2.44
3106 3261 4.224370 GTCAAGTACTACCTCCATCCCAAA 59.776 45.833 0.00 0.00 0.00 3.28
3107 3262 3.773119 GTCAAGTACTACCTCCATCCCAA 59.227 47.826 0.00 0.00 0.00 4.12
3108 3263 3.245839 TGTCAAGTACTACCTCCATCCCA 60.246 47.826 0.00 0.00 0.00 4.37
3109 3264 3.371965 TGTCAAGTACTACCTCCATCCC 58.628 50.000 0.00 0.00 0.00 3.85
3110 3265 5.615925 ATTGTCAAGTACTACCTCCATCC 57.384 43.478 0.00 0.00 0.00 3.51
3111 3266 5.817816 CCAATTGTCAAGTACTACCTCCATC 59.182 44.000 4.43 0.00 0.00 3.51
3112 3267 5.250774 ACCAATTGTCAAGTACTACCTCCAT 59.749 40.000 4.43 0.00 0.00 3.41
3113 3268 4.595781 ACCAATTGTCAAGTACTACCTCCA 59.404 41.667 4.43 0.00 0.00 3.86
3114 3269 4.935808 CACCAATTGTCAAGTACTACCTCC 59.064 45.833 4.43 0.00 0.00 4.30
3115 3270 5.548406 ACACCAATTGTCAAGTACTACCTC 58.452 41.667 4.43 0.00 29.79 3.85
3116 3271 5.562298 ACACCAATTGTCAAGTACTACCT 57.438 39.130 4.43 0.00 29.79 3.08
3117 3272 5.350640 GCTACACCAATTGTCAAGTACTACC 59.649 44.000 4.43 0.00 39.91 3.18
3118 3273 6.164176 AGCTACACCAATTGTCAAGTACTAC 58.836 40.000 4.43 0.00 39.91 2.73
3119 3274 6.354794 AGCTACACCAATTGTCAAGTACTA 57.645 37.500 4.43 0.00 39.91 1.82
3120 3275 5.228945 AGCTACACCAATTGTCAAGTACT 57.771 39.130 4.43 0.00 39.91 2.73
3121 3276 5.701290 AGAAGCTACACCAATTGTCAAGTAC 59.299 40.000 4.43 0.00 39.91 2.73
3131 3286 3.684788 CGCTAAACAGAAGCTACACCAAT 59.315 43.478 0.00 0.00 37.85 3.16
3185 3341 4.304939 ACGCTTGTTTTACTCTAGACCAC 58.695 43.478 0.00 0.00 0.00 4.16
3207 3363 1.938657 GCTCTCTCGGCTGTGCAGTA 61.939 60.000 0.00 0.00 0.00 2.74
3208 3364 2.969016 CTCTCTCGGCTGTGCAGT 59.031 61.111 0.00 0.00 0.00 4.40
3209 3365 2.508887 GCTCTCTCGGCTGTGCAG 60.509 66.667 0.00 0.00 0.00 4.41
3211 3367 1.449246 ATTGCTCTCTCGGCTGTGC 60.449 57.895 0.00 0.00 0.00 4.57
3212 3368 1.088340 CCATTGCTCTCTCGGCTGTG 61.088 60.000 0.00 0.00 0.00 3.66
3213 3369 1.220206 CCATTGCTCTCTCGGCTGT 59.780 57.895 0.00 0.00 0.00 4.40
3236 3393 1.597445 GCTACCTCACATCGCTACGAC 60.597 57.143 0.00 0.00 39.18 4.34
3238 3395 0.380733 TGCTACCTCACATCGCTACG 59.619 55.000 0.00 0.00 0.00 3.51
3268 3425 3.247563 ACTGCAATTTCAACGTACACG 57.752 42.857 0.00 0.00 46.33 4.49
3274 3431 5.491973 CCAAAGAAAACTGCAATTTCAACG 58.508 37.500 20.58 11.22 38.86 4.10
3292 3516 7.862372 GGACATAATACACACATATTGCCAAAG 59.138 37.037 0.00 0.00 0.00 2.77
3360 3670 8.397575 TGTATATACAGAAAGGTTTGTTGCAA 57.602 30.769 11.62 0.00 0.00 4.08
3361 3671 7.987750 TGTATATACAGAAAGGTTTGTTGCA 57.012 32.000 11.62 0.00 0.00 4.08
3585 3903 4.919754 GTCAATTTGTTCCTGTCTGATTGC 59.080 41.667 0.00 0.00 0.00 3.56
3643 3961 7.886338 ACCAAGATACAAAATCCACTTTCTTC 58.114 34.615 0.00 0.00 0.00 2.87
3672 3990 9.578576 TCCGTAGTCAGTACCAGTAATTATAAT 57.421 33.333 0.00 0.00 0.00 1.28
3699 4017 4.332819 ACAGACTACACAAAAAGTCAGTGC 59.667 41.667 5.38 0.00 43.74 4.40
3796 4114 9.309516 GTATATCTGGTTCATTTCGTAAAGACA 57.690 33.333 0.00 0.00 0.00 3.41
3804 4122 6.535150 ACACACTGTATATCTGGTTCATTTCG 59.465 38.462 0.00 0.00 0.00 3.46
3895 4213 4.798387 CGTTTGTTTTTCCTCCTCTTTGTG 59.202 41.667 0.00 0.00 0.00 3.33
4012 4330 8.934825 TCAAAAGCCAGTTTATTATGAAATTGC 58.065 29.630 0.00 0.00 0.00 3.56
4020 4338 6.536224 GCAGCATTCAAAAGCCAGTTTATTAT 59.464 34.615 0.00 0.00 0.00 1.28
4033 4361 0.749649 AACACGGGCAGCATTCAAAA 59.250 45.000 0.00 0.00 0.00 2.44
4034 4362 1.610363 TAACACGGGCAGCATTCAAA 58.390 45.000 0.00 0.00 0.00 2.69
4053 4381 7.177392 GGTAGATGGGCTCAAGCAATTATTAAT 59.823 37.037 4.13 0.00 44.36 1.40
4132 4460 7.189693 TGCAAAGAAGAACACAACTATACAG 57.810 36.000 0.00 0.00 0.00 2.74
4134 4462 6.204882 ACCTGCAAAGAAGAACACAACTATAC 59.795 38.462 0.00 0.00 0.00 1.47
4201 4529 7.031372 CGCTATAAGTAGAGTTGTACCAAACA 58.969 38.462 0.00 0.00 35.88 2.83
4282 4610 2.093306 TGGGAAACAGAGCACATACG 57.907 50.000 0.00 0.00 0.00 3.06
4356 4684 8.916062 TGGATACCTATAGAAACAAACACGATA 58.084 33.333 0.00 0.00 0.00 2.92
4365 4693 5.601583 TGCGTTGGATACCTATAGAAACA 57.398 39.130 0.00 0.00 0.00 2.83
4415 4744 7.801716 TTACATATTCCAATAGCACTTCCAC 57.198 36.000 0.00 0.00 0.00 4.02
4577 4906 9.809096 CTACTGACTCTGTAATACATTCAACAT 57.191 33.333 0.00 0.00 0.00 2.71
4578 4907 9.020731 TCTACTGACTCTGTAATACATTCAACA 57.979 33.333 0.00 0.00 0.00 3.33
4580 4909 8.191446 GCTCTACTGACTCTGTAATACATTCAA 58.809 37.037 0.00 0.00 0.00 2.69
4672 5001 8.411683 AGACCTTGCATCTTCATCATAATTTTC 58.588 33.333 0.00 0.00 0.00 2.29
4885 5254 7.445402 ACAATCTGTATGCCATAGTTATTGACC 59.555 37.037 14.81 0.00 0.00 4.02
4996 5365 6.708285 AGGTATTACAGGTTTAAGTCACTGG 58.292 40.000 0.00 0.00 35.34 4.00
5068 5437 4.558226 AGATGTAACCAATCACTGCAGA 57.442 40.909 23.35 0.00 0.00 4.26
5215 5584 5.815740 AGTAGGCAATACGAACCTTGTTATG 59.184 40.000 0.00 0.00 39.55 1.90
5216 5585 5.985911 AGTAGGCAATACGAACCTTGTTAT 58.014 37.500 0.00 0.00 39.55 1.89
5549 5918 3.059325 GGCTACTTTATGATTCTGCTGCG 60.059 47.826 0.00 0.00 0.00 5.18
5668 6037 6.156519 TGTCGCTGAATAGATATAAACGCAT 58.843 36.000 0.00 0.00 0.00 4.73
5675 6044 9.063615 TCAACTACTTGTCGCTGAATAGATATA 57.936 33.333 0.00 0.00 0.00 0.86
5688 6057 7.060600 TCAATAATTGCTCAACTACTTGTCG 57.939 36.000 0.00 0.00 0.00 4.35
5719 6088 3.235157 TGATAGCTTGGTTTGCATTGC 57.765 42.857 0.46 0.46 0.00 3.56
5926 6295 5.476599 TGTGGCAATACTTTATGCAACTTCT 59.523 36.000 6.80 0.00 44.96 2.85
6058 6427 6.486248 CACACGCCCATATTTGTATATATGC 58.514 40.000 0.00 0.00 37.23 3.14
6150 6521 6.227298 AGACCAGTTACCATGATAAGACAG 57.773 41.667 0.00 0.00 0.00 3.51
6157 6528 4.532126 TCAGACAAGACCAGTTACCATGAT 59.468 41.667 0.00 0.00 0.00 2.45
6252 6623 2.163010 CCTTCACTAATGCAGCACCTTG 59.837 50.000 0.00 0.00 0.00 3.61
6295 6666 8.014322 TGAAATGCAAGTACTAGACTAAAACG 57.986 34.615 0.00 0.00 37.44 3.60
6301 6672 9.155975 CTTACAATGAAATGCAAGTACTAGACT 57.844 33.333 0.00 0.00 41.56 3.24
6337 6708 5.545588 TGGCTGATGAATGAAGATAGTAGC 58.454 41.667 0.00 0.00 0.00 3.58
6516 6887 0.739462 TTTCATGCCTCCGCTGTACG 60.739 55.000 0.00 0.00 43.15 3.67
6517 6888 1.398390 CTTTTCATGCCTCCGCTGTAC 59.602 52.381 0.00 0.00 35.36 2.90
6590 6961 9.157104 GAAGGGTTGAAACTTGAAACATAAAAA 57.843 29.630 0.00 0.00 0.00 1.94
6870 7241 4.331168 GCTGTCAGATACATTGGAACAGAC 59.669 45.833 3.32 0.00 37.50 3.51
6900 7271 2.839228 AGTACTTCTGCCTCCTCCATT 58.161 47.619 0.00 0.00 0.00 3.16
7108 7481 4.039245 TCAATCTTCGACTCTTGTTCTGGT 59.961 41.667 0.00 0.00 0.00 4.00
7124 7497 4.437239 CGATGGACTAGCTGTTCAATCTT 58.563 43.478 0.00 0.00 37.77 2.40
7150 7523 3.316308 AGATCTTGTTTGCACTTGGTGAC 59.684 43.478 1.57 0.00 35.23 3.67
7207 7580 2.092699 GGCTATTCTCACCTCCTGCTTT 60.093 50.000 0.00 0.00 0.00 3.51
7246 7619 2.103042 CCTGCTTTTCGCCCTCTCG 61.103 63.158 0.00 0.00 38.05 4.04
7407 7784 0.538118 CATGGAATGCTTGGGGTTGG 59.462 55.000 0.00 0.00 37.62 3.77
7531 7908 6.039270 TCTCGAAAAGTTGAACCACATCAAAT 59.961 34.615 0.00 0.00 40.76 2.32
7709 8091 3.378911 AAATGTTAGGTTGTTTGCGGG 57.621 42.857 0.00 0.00 0.00 6.13
7855 8237 3.055963 TCCCTTTTCACTCCGCGTATTAA 60.056 43.478 4.92 0.00 0.00 1.40
7895 8277 2.684001 ATAGTTTTCGCACATCCCGA 57.316 45.000 0.00 0.00 0.00 5.14
8002 8384 7.962918 CGTCTAGACATACCCAAATTCTTTTTG 59.037 37.037 22.37 0.00 0.00 2.44
8008 8390 3.808174 GGCGTCTAGACATACCCAAATTC 59.192 47.826 22.37 0.00 0.00 2.17
8025 8407 5.062183 GCTGATTTTTAAAAGGAATGGCGTC 59.938 40.000 0.14 0.00 0.00 5.19
8029 8411 7.605449 TCTCTGCTGATTTTTAAAAGGAATGG 58.395 34.615 0.14 0.00 0.00 3.16
8040 8422 6.830873 ACTAAATGCTCTCTGCTGATTTTT 57.169 33.333 0.00 0.00 43.37 1.94
8132 8514 8.864024 GGTCGTTAGTTTCTACTACCAAATTAC 58.136 37.037 0.00 0.00 36.61 1.89
8133 8515 8.584157 TGGTCGTTAGTTTCTACTACCAAATTA 58.416 33.333 0.00 0.00 36.70 1.40
8134 8516 7.444299 TGGTCGTTAGTTTCTACTACCAAATT 58.556 34.615 0.00 0.00 36.70 1.82
8135 8517 6.996509 TGGTCGTTAGTTTCTACTACCAAAT 58.003 36.000 0.00 0.00 36.70 2.32
8136 8518 6.403866 TGGTCGTTAGTTTCTACTACCAAA 57.596 37.500 0.00 0.00 36.70 3.28
8137 8519 6.403866 TTGGTCGTTAGTTTCTACTACCAA 57.596 37.500 7.12 7.12 42.67 3.67
8138 8520 6.040842 AGTTTGGTCGTTAGTTTCTACTACCA 59.959 38.462 0.00 0.00 37.46 3.25
8139 8521 6.450545 AGTTTGGTCGTTAGTTTCTACTACC 58.549 40.000 0.00 0.00 36.61 3.18
8143 8525 7.008440 ACAAAGTTTGGTCGTTAGTTTCTAC 57.992 36.000 19.45 0.00 34.12 2.59
8162 8544 8.838452 TGTACACACGGTTTTTAAATACAAAG 57.162 30.769 10.38 4.53 0.00 2.77
8184 8566 7.255569 CCTCATCGTTGTTACTCTACATTGTA 58.744 38.462 0.00 0.00 0.00 2.41
8199 8581 1.442526 GCATGGGAGCCTCATCGTTG 61.443 60.000 0.00 0.00 0.00 4.10
8201 8583 1.913951 TTGCATGGGAGCCTCATCGT 61.914 55.000 0.00 0.00 0.00 3.73
8202 8584 0.749091 TTTGCATGGGAGCCTCATCG 60.749 55.000 0.00 0.00 0.00 3.84
8203 8585 0.743097 GTTTGCATGGGAGCCTCATC 59.257 55.000 0.00 0.00 0.00 2.92
8204 8586 1.033746 CGTTTGCATGGGAGCCTCAT 61.034 55.000 0.00 0.00 0.00 2.90
8205 8587 1.675310 CGTTTGCATGGGAGCCTCA 60.675 57.895 0.00 0.00 0.00 3.86
8206 8588 2.409870 CCGTTTGCATGGGAGCCTC 61.410 63.158 0.00 0.00 0.00 4.70
8207 8589 2.215451 ATCCGTTTGCATGGGAGCCT 62.215 55.000 6.96 0.00 32.43 4.58
8208 8590 1.754234 ATCCGTTTGCATGGGAGCC 60.754 57.895 6.96 0.00 32.43 4.70
8209 8591 1.031571 TCATCCGTTTGCATGGGAGC 61.032 55.000 6.96 0.00 32.43 4.70
8210 8592 1.462616 TTCATCCGTTTGCATGGGAG 58.537 50.000 6.96 1.14 32.43 4.30
8211 8593 1.916506 TTTCATCCGTTTGCATGGGA 58.083 45.000 3.69 3.69 0.00 4.37
8212 8594 2.965572 ATTTCATCCGTTTGCATGGG 57.034 45.000 0.00 0.00 0.00 4.00
8213 8595 3.798337 GCTTATTTCATCCGTTTGCATGG 59.202 43.478 0.00 0.00 0.00 3.66
8214 8596 3.483196 CGCTTATTTCATCCGTTTGCATG 59.517 43.478 0.00 0.00 0.00 4.06
8215 8597 3.694734 CGCTTATTTCATCCGTTTGCAT 58.305 40.909 0.00 0.00 0.00 3.96
8216 8598 2.730715 GCGCTTATTTCATCCGTTTGCA 60.731 45.455 0.00 0.00 0.00 4.08
8217 8599 1.846175 GCGCTTATTTCATCCGTTTGC 59.154 47.619 0.00 0.00 0.00 3.68
8218 8600 3.100817 CTGCGCTTATTTCATCCGTTTG 58.899 45.455 9.73 0.00 0.00 2.93
8219 8601 3.006940 TCTGCGCTTATTTCATCCGTTT 58.993 40.909 9.73 0.00 0.00 3.60
8220 8602 2.351726 GTCTGCGCTTATTTCATCCGTT 59.648 45.455 9.73 0.00 0.00 4.44
8221 8603 1.933853 GTCTGCGCTTATTTCATCCGT 59.066 47.619 9.73 0.00 0.00 4.69
8222 8604 1.071239 CGTCTGCGCTTATTTCATCCG 60.071 52.381 9.73 0.00 0.00 4.18
8223 8605 2.201732 TCGTCTGCGCTTATTTCATCC 58.798 47.619 9.73 0.00 38.14 3.51
8224 8606 2.348032 GCTCGTCTGCGCTTATTTCATC 60.348 50.000 9.73 0.00 38.14 2.92
8225 8607 1.594862 GCTCGTCTGCGCTTATTTCAT 59.405 47.619 9.73 0.00 38.14 2.57
8226 8608 0.999406 GCTCGTCTGCGCTTATTTCA 59.001 50.000 9.73 0.00 38.14 2.69
8227 8609 0.999406 TGCTCGTCTGCGCTTATTTC 59.001 50.000 9.73 0.00 38.14 2.17
8228 8610 1.002366 CTGCTCGTCTGCGCTTATTT 58.998 50.000 9.73 0.00 38.14 1.40
8229 8611 0.807667 CCTGCTCGTCTGCGCTTATT 60.808 55.000 9.73 0.00 38.14 1.40
8230 8612 1.227089 CCTGCTCGTCTGCGCTTAT 60.227 57.895 9.73 0.00 38.14 1.73
8231 8613 2.181777 CCTGCTCGTCTGCGCTTA 59.818 61.111 9.73 0.00 38.14 3.09
8253 8635 1.342082 CGGTTAACTCTCCGTGTGCG 61.342 60.000 5.42 0.00 41.58 5.34
8254 8636 0.038892 TCGGTTAACTCTCCGTGTGC 60.039 55.000 5.42 0.00 45.88 4.57
8255 8637 1.001048 TGTCGGTTAACTCTCCGTGTG 60.001 52.381 5.42 0.00 45.88 3.82
8256 8638 1.268899 CTGTCGGTTAACTCTCCGTGT 59.731 52.381 5.42 0.00 45.88 4.49
8257 8639 1.402456 CCTGTCGGTTAACTCTCCGTG 60.402 57.143 5.42 0.00 45.88 4.94
8258 8640 0.886563 CCTGTCGGTTAACTCTCCGT 59.113 55.000 5.42 0.00 45.88 4.69
8259 8641 0.458025 GCCTGTCGGTTAACTCTCCG 60.458 60.000 5.42 0.36 46.93 4.63
8260 8642 0.458025 CGCCTGTCGGTTAACTCTCC 60.458 60.000 5.42 0.00 33.78 3.71
8261 8643 0.524862 TCGCCTGTCGGTTAACTCTC 59.475 55.000 5.42 0.00 39.05 3.20
8262 8644 0.243095 GTCGCCTGTCGGTTAACTCT 59.757 55.000 5.42 0.00 39.05 3.24
8263 8645 0.038892 TGTCGCCTGTCGGTTAACTC 60.039 55.000 5.42 0.00 39.05 3.01
8264 8646 0.038526 CTGTCGCCTGTCGGTTAACT 60.039 55.000 5.42 0.00 39.05 2.24
8265 8647 0.038892 TCTGTCGCCTGTCGGTTAAC 60.039 55.000 0.00 0.00 39.05 2.01
8266 8648 0.892755 ATCTGTCGCCTGTCGGTTAA 59.107 50.000 0.00 0.00 39.05 2.01
8267 8649 1.753930 TATCTGTCGCCTGTCGGTTA 58.246 50.000 0.00 0.00 39.05 2.85
8268 8650 0.892755 TTATCTGTCGCCTGTCGGTT 59.107 50.000 0.00 0.00 39.05 4.44
8269 8651 0.892755 TTTATCTGTCGCCTGTCGGT 59.107 50.000 0.00 0.00 39.05 4.69
8270 8652 1.659098 GTTTTATCTGTCGCCTGTCGG 59.341 52.381 0.00 0.00 39.05 4.79
8271 8653 2.607187 AGTTTTATCTGTCGCCTGTCG 58.393 47.619 0.00 0.00 40.15 4.35
8272 8654 5.348986 TCATAGTTTTATCTGTCGCCTGTC 58.651 41.667 0.00 0.00 0.00 3.51
8273 8655 5.339008 TCATAGTTTTATCTGTCGCCTGT 57.661 39.130 0.00 0.00 0.00 4.00
8274 8656 7.653713 ACTTATCATAGTTTTATCTGTCGCCTG 59.346 37.037 0.00 0.00 0.00 4.85
8275 8657 7.727181 ACTTATCATAGTTTTATCTGTCGCCT 58.273 34.615 0.00 0.00 0.00 5.52
8276 8658 7.948278 ACTTATCATAGTTTTATCTGTCGCC 57.052 36.000 0.00 0.00 0.00 5.54
8277 8659 9.031360 TCAACTTATCATAGTTTTATCTGTCGC 57.969 33.333 0.00 0.00 36.24 5.19
8287 8669 8.883731 CGGTCTTTGATCAACTTATCATAGTTT 58.116 33.333 7.89 0.00 36.24 2.66
8288 8670 8.041323 ACGGTCTTTGATCAACTTATCATAGTT 58.959 33.333 7.89 0.00 38.87 2.24
8289 8671 7.492669 CACGGTCTTTGATCAACTTATCATAGT 59.507 37.037 7.89 0.00 36.72 2.12
8290 8672 7.706607 TCACGGTCTTTGATCAACTTATCATAG 59.293 37.037 7.89 0.19 35.84 2.23
8291 8673 7.552459 TCACGGTCTTTGATCAACTTATCATA 58.448 34.615 7.89 0.00 35.84 2.15
8292 8674 6.406370 TCACGGTCTTTGATCAACTTATCAT 58.594 36.000 7.89 0.00 35.84 2.45
8293 8675 5.789521 TCACGGTCTTTGATCAACTTATCA 58.210 37.500 7.89 0.00 34.07 2.15
8294 8676 6.910536 ATCACGGTCTTTGATCAACTTATC 57.089 37.500 7.89 0.00 0.00 1.75
8295 8677 7.687941 AAATCACGGTCTTTGATCAACTTAT 57.312 32.000 7.89 0.00 32.29 1.73
8296 8678 8.025243 GTAAATCACGGTCTTTGATCAACTTA 57.975 34.615 7.89 0.00 32.29 2.24
8297 8679 6.899114 GTAAATCACGGTCTTTGATCAACTT 58.101 36.000 7.89 0.00 32.29 2.66
8298 8680 6.481954 GTAAATCACGGTCTTTGATCAACT 57.518 37.500 7.89 0.00 32.29 3.16
8313 8695 3.183775 CCTATGCTTACGCCGTAAATCAC 59.816 47.826 11.26 2.14 34.43 3.06
8314 8696 3.386486 CCTATGCTTACGCCGTAAATCA 58.614 45.455 11.26 11.73 34.43 2.57
8315 8697 2.157085 GCCTATGCTTACGCCGTAAATC 59.843 50.000 11.26 6.57 34.43 2.17
8316 8698 2.140717 GCCTATGCTTACGCCGTAAAT 58.859 47.619 11.26 5.38 34.43 1.40
8317 8699 1.574134 GCCTATGCTTACGCCGTAAA 58.426 50.000 11.26 0.00 34.43 2.01
8318 8700 0.595567 CGCCTATGCTTACGCCGTAA 60.596 55.000 9.62 9.62 34.43 3.18
8319 8701 1.008194 CGCCTATGCTTACGCCGTA 60.008 57.895 0.00 0.00 34.43 4.02
8320 8702 2.279252 CGCCTATGCTTACGCCGT 60.279 61.111 0.00 0.00 34.43 5.68
8321 8703 2.027024 TCGCCTATGCTTACGCCG 59.973 61.111 0.00 0.00 34.43 6.46
8322 8704 0.600255 ATGTCGCCTATGCTTACGCC 60.600 55.000 0.00 0.00 34.43 5.68
8323 8705 0.508641 CATGTCGCCTATGCTTACGC 59.491 55.000 0.00 0.00 34.43 4.42
8324 8706 1.522676 CACATGTCGCCTATGCTTACG 59.477 52.381 0.00 0.00 34.43 3.18
8325 8707 1.261619 GCACATGTCGCCTATGCTTAC 59.738 52.381 0.00 0.00 33.44 2.34
8326 8708 1.581934 GCACATGTCGCCTATGCTTA 58.418 50.000 0.00 0.00 33.44 3.09
8327 8709 1.431488 CGCACATGTCGCCTATGCTT 61.431 55.000 12.62 0.00 34.06 3.91
8328 8710 1.884464 CGCACATGTCGCCTATGCT 60.884 57.895 12.62 0.00 34.06 3.79
8329 8711 1.882625 TCGCACATGTCGCCTATGC 60.883 57.895 12.62 3.91 0.00 3.14
8330 8712 0.528466 AGTCGCACATGTCGCCTATG 60.528 55.000 12.62 0.00 0.00 2.23
8331 8713 1.029681 TAGTCGCACATGTCGCCTAT 58.970 50.000 12.62 3.97 0.00 2.57
8332 8714 0.812549 TTAGTCGCACATGTCGCCTA 59.187 50.000 12.62 8.77 0.00 3.93
8333 8715 0.736325 GTTAGTCGCACATGTCGCCT 60.736 55.000 12.62 9.57 0.00 5.52
8334 8716 1.011968 TGTTAGTCGCACATGTCGCC 61.012 55.000 12.62 3.41 0.00 5.54
8335 8717 0.366871 CTGTTAGTCGCACATGTCGC 59.633 55.000 0.00 2.57 0.00 5.19
8336 8718 1.386748 CACTGTTAGTCGCACATGTCG 59.613 52.381 0.00 3.20 0.00 4.35
8337 8719 2.404215 ACACTGTTAGTCGCACATGTC 58.596 47.619 0.00 0.00 0.00 3.06
8338 8720 2.526304 ACACTGTTAGTCGCACATGT 57.474 45.000 0.00 0.00 0.00 3.21
8339 8721 3.575630 AGTACACTGTTAGTCGCACATG 58.424 45.455 0.00 0.00 0.00 3.21
8340 8722 3.936372 AGTACACTGTTAGTCGCACAT 57.064 42.857 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.