Multiple sequence alignment - TraesCS5B01G187300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G187300 chr5B 100.000 3841 0 0 1 3841 339489392 339493232 0.000000e+00 7094.0
1 TraesCS5B01G187300 chr5D 91.010 901 42 16 2126 2995 298760322 298761214 0.000000e+00 1179.0
2 TraesCS5B01G187300 chr5D 93.861 733 15 4 1002 1711 298759030 298759755 0.000000e+00 1077.0
3 TraesCS5B01G187300 chr5D 88.504 548 46 7 3307 3841 298761678 298762221 0.000000e+00 647.0
4 TraesCS5B01G187300 chr5D 93.023 430 24 3 475 903 298758300 298758724 1.170000e-174 623.0
5 TraesCS5B01G187300 chr5D 95.349 215 8 2 1708 1921 298759808 298760021 1.320000e-89 340.0
6 TraesCS5B01G187300 chr5D 96.970 165 5 0 1960 2124 298760029 298760193 1.050000e-70 278.0
7 TraesCS5B01G187300 chr5D 98.507 67 1 0 3221 3287 356139650 356139584 6.740000e-23 119.0
8 TraesCS5B01G187300 chr5A 94.239 677 24 3 2335 2998 400015103 400014429 0.000000e+00 1020.0
9 TraesCS5B01G187300 chr5A 94.092 677 25 3 2335 2998 400013905 400013231 0.000000e+00 1014.0
10 TraesCS5B01G187300 chr5A 96.475 539 15 3 3307 3841 398939152 398938614 0.000000e+00 887.0
11 TraesCS5B01G187300 chr5A 92.771 83 5 1 3110 3191 400014423 400014341 6.740000e-23 119.0
12 TraesCS5B01G187300 chr5A 91.566 83 5 2 3110 3191 400013225 400013144 3.140000e-21 113.0
13 TraesCS5B01G187300 chr1D 82.479 234 22 10 2494 2723 417578234 417578452 1.820000e-43 187.0
14 TraesCS5B01G187300 chr1D 93.478 46 0 3 3114 3158 300011819 300011862 8.910000e-07 65.8
15 TraesCS5B01G187300 chr4D 94.872 117 6 0 2998 3114 198602525 198602409 2.360000e-42 183.0
16 TraesCS5B01G187300 chr4D 98.507 67 1 0 3221 3287 208443153 208443087 6.740000e-23 119.0
17 TraesCS5B01G187300 chr4D 95.349 43 0 2 3114 3155 382305487 382305528 2.480000e-07 67.6
18 TraesCS5B01G187300 chrUn 90.984 122 11 0 2995 3116 80232313 80232434 8.540000e-37 165.0
19 TraesCS5B01G187300 chrUn 95.652 46 0 2 3110 3154 119058267 119058223 5.320000e-09 73.1
20 TraesCS5B01G187300 chr2D 90.756 119 11 0 2995 3113 461390817 461390935 3.970000e-35 159.0
21 TraesCS5B01G187300 chr2D 88.136 118 14 0 2995 3112 475505505 475505622 1.440000e-29 141.0
22 TraesCS5B01G187300 chr7D 90.517 116 11 0 2995 3110 451300333 451300448 1.850000e-33 154.0
23 TraesCS5B01G187300 chr7D 100.000 64 0 0 3221 3284 10303078 10303141 6.740000e-23 119.0
24 TraesCS5B01G187300 chr2B 89.474 114 11 1 2995 3108 575872203 575872315 4.000000e-30 143.0
25 TraesCS5B01G187300 chr6A 77.075 253 52 4 66 313 499587799 499588050 1.440000e-29 141.0
26 TraesCS5B01G187300 chr6A 98.507 67 1 0 3221 3287 379063662 379063596 6.740000e-23 119.0
27 TraesCS5B01G187300 chr3D 85.950 121 17 0 2995 3115 582131163 582131283 3.110000e-26 130.0
28 TraesCS5B01G187300 chr4B 87.387 111 14 0 2998 3108 612030440 612030330 1.120000e-25 128.0
29 TraesCS5B01G187300 chr4B 94.595 74 2 2 3222 3293 16080290 16080363 3.140000e-21 113.0
30 TraesCS5B01G187300 chr4A 85.714 119 15 2 2999 3115 681670109 681669991 1.450000e-24 124.0
31 TraesCS5B01G187300 chr7B 100.000 64 0 0 3221 3284 36104928 36104991 6.740000e-23 119.0
32 TraesCS5B01G187300 chr7B 95.455 44 0 2 3112 3154 747593668 747593626 6.890000e-08 69.4
33 TraesCS5B01G187300 chr3B 100.000 64 0 0 3221 3284 641400485 641400548 6.740000e-23 119.0
34 TraesCS5B01G187300 chr3B 100.000 64 0 0 3221 3284 675008569 675008632 6.740000e-23 119.0
35 TraesCS5B01G187300 chr3B 97.059 68 2 0 3217 3284 6964890 6964957 8.720000e-22 115.0
36 TraesCS5B01G187300 chr3B 95.349 43 0 2 3113 3154 802705152 802705111 2.480000e-07 67.6
37 TraesCS5B01G187300 chr3A 87.719 57 3 4 3111 3165 673593588 673593642 3.200000e-06 63.9
38 TraesCS5B01G187300 chr1B 97.059 34 0 1 3114 3146 317366033 317366066 5.360000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G187300 chr5B 339489392 339493232 3840 False 7094.000000 7094 100.0000 1 3841 1 chr5B.!!$F1 3840
1 TraesCS5B01G187300 chr5D 298758300 298762221 3921 False 690.666667 1179 93.1195 475 3841 6 chr5D.!!$F1 3366
2 TraesCS5B01G187300 chr5A 398938614 398939152 538 True 887.000000 887 96.4750 3307 3841 1 chr5A.!!$R1 534
3 TraesCS5B01G187300 chr5A 400013144 400015103 1959 True 566.500000 1020 93.1670 2335 3191 4 chr5A.!!$R2 856

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 110 0.031994 GCATTTGGCCGAACACTTGT 59.968 50.0 7.84 0.00 36.11 3.16 F
406 407 0.031994 CCGCAAACCTCCCAGTTTTG 59.968 55.0 0.00 0.00 37.87 2.44 F
415 416 0.106419 TCCCAGTTTTGCTTCCGGTT 60.106 50.0 0.00 0.00 0.00 4.44 F
468 469 0.170116 ACGTTAATGCATGGCGTTGG 59.830 50.0 14.82 0.00 38.31 3.77 F
2186 2602 0.107557 ATGTGATGTGATGCGCAGGA 60.108 50.0 18.32 0.57 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1746 2034 0.036010 CCGGAACATGAGAGGCAAGT 60.036 55.0 0.00 0.00 0.0 3.16 R
1751 2039 0.107508 ATGCACCGGAACATGAGAGG 60.108 55.0 9.46 0.00 0.0 3.69 R
2066 2355 0.109532 TGTTGCCTGTTTGATCCGGA 59.890 50.0 6.61 6.61 0.0 5.14 R
2218 2634 0.317854 GCCAGGTTTTTCAGCGTGTC 60.318 55.0 0.00 0.00 0.0 3.67 R
3219 4868 0.033796 TCGGACGGAGGGAGTACAAT 60.034 55.0 0.00 0.00 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.600692 TCTTCTTCATTTGACGAGGACA 57.399 40.909 0.00 0.00 0.00 4.02
25 26 5.152623 TCTTCTTCATTTGACGAGGACAT 57.847 39.130 0.00 0.00 0.00 3.06
26 27 6.280855 TCTTCTTCATTTGACGAGGACATA 57.719 37.500 0.00 0.00 0.00 2.29
27 28 6.878317 TCTTCTTCATTTGACGAGGACATAT 58.122 36.000 0.00 0.00 0.00 1.78
28 29 8.007405 TCTTCTTCATTTGACGAGGACATATA 57.993 34.615 0.00 0.00 0.00 0.86
29 30 8.474831 TCTTCTTCATTTGACGAGGACATATAA 58.525 33.333 0.00 0.00 0.00 0.98
30 31 9.098355 CTTCTTCATTTGACGAGGACATATAAA 57.902 33.333 0.00 0.00 0.00 1.40
31 32 9.613428 TTCTTCATTTGACGAGGACATATAAAT 57.387 29.630 0.00 0.00 0.00 1.40
32 33 9.045223 TCTTCATTTGACGAGGACATATAAATG 57.955 33.333 0.00 0.00 39.17 2.32
33 34 8.956533 TTCATTTGACGAGGACATATAAATGA 57.043 30.769 0.00 0.00 39.72 2.57
34 35 8.956533 TCATTTGACGAGGACATATAAATGAA 57.043 30.769 0.00 0.00 39.00 2.57
35 36 8.826710 TCATTTGACGAGGACATATAAATGAAC 58.173 33.333 0.00 0.00 39.00 3.18
36 37 8.830580 CATTTGACGAGGACATATAAATGAACT 58.169 33.333 0.00 0.00 36.61 3.01
37 38 8.420374 TTTGACGAGGACATATAAATGAACTC 57.580 34.615 0.00 0.00 36.54 3.01
40 41 4.386049 CGAGGACATATAAATGAACTCGGC 59.614 45.833 18.98 0.00 46.50 5.54
41 42 4.307432 AGGACATATAAATGAACTCGGCG 58.693 43.478 0.00 0.00 36.54 6.46
42 43 4.056050 GGACATATAAATGAACTCGGCGT 58.944 43.478 6.85 0.00 36.54 5.68
43 44 5.010314 AGGACATATAAATGAACTCGGCGTA 59.990 40.000 6.85 0.00 36.54 4.42
44 45 5.345202 GGACATATAAATGAACTCGGCGTAG 59.655 44.000 6.85 5.77 36.54 3.51
45 46 6.080648 ACATATAAATGAACTCGGCGTAGA 57.919 37.500 6.85 0.00 36.54 2.59
46 47 6.509656 ACATATAAATGAACTCGGCGTAGAA 58.490 36.000 6.85 0.00 36.54 2.10
47 48 6.641314 ACATATAAATGAACTCGGCGTAGAAG 59.359 38.462 6.85 0.00 36.54 2.85
48 49 3.314541 AAATGAACTCGGCGTAGAAGT 57.685 42.857 6.85 0.00 0.00 3.01
49 50 4.445452 AAATGAACTCGGCGTAGAAGTA 57.555 40.909 6.85 0.00 0.00 2.24
50 51 2.907910 TGAACTCGGCGTAGAAGTAC 57.092 50.000 6.85 0.00 0.00 2.73
51 52 2.430465 TGAACTCGGCGTAGAAGTACT 58.570 47.619 6.85 0.00 0.00 2.73
52 53 2.417933 TGAACTCGGCGTAGAAGTACTC 59.582 50.000 6.85 0.00 0.00 2.59
53 54 2.399916 ACTCGGCGTAGAAGTACTCT 57.600 50.000 6.85 0.00 38.28 3.24
54 55 2.008329 ACTCGGCGTAGAAGTACTCTG 58.992 52.381 6.85 0.00 35.41 3.35
55 56 0.731417 TCGGCGTAGAAGTACTCTGC 59.269 55.000 6.85 0.00 35.41 4.26
56 57 0.450583 CGGCGTAGAAGTACTCTGCA 59.549 55.000 0.00 0.00 36.62 4.41
57 58 1.135489 CGGCGTAGAAGTACTCTGCAA 60.135 52.381 0.00 0.00 36.62 4.08
58 59 2.260481 GGCGTAGAAGTACTCTGCAAC 58.740 52.381 0.00 0.00 36.62 4.17
59 60 2.094649 GGCGTAGAAGTACTCTGCAACT 60.095 50.000 0.00 0.00 36.62 3.16
60 61 2.917971 GCGTAGAAGTACTCTGCAACTG 59.082 50.000 0.00 0.00 36.62 3.16
61 62 3.366070 GCGTAGAAGTACTCTGCAACTGA 60.366 47.826 0.00 0.00 36.62 3.41
62 63 4.795268 CGTAGAAGTACTCTGCAACTGAA 58.205 43.478 0.00 0.00 36.62 3.02
63 64 5.403246 CGTAGAAGTACTCTGCAACTGAAT 58.597 41.667 0.00 0.00 36.62 2.57
64 65 6.552629 CGTAGAAGTACTCTGCAACTGAATA 58.447 40.000 0.00 0.00 36.62 1.75
65 66 7.027760 CGTAGAAGTACTCTGCAACTGAATAA 58.972 38.462 0.00 0.00 36.62 1.40
66 67 7.541091 CGTAGAAGTACTCTGCAACTGAATAAA 59.459 37.037 0.00 0.00 36.62 1.40
67 68 9.204570 GTAGAAGTACTCTGCAACTGAATAAAA 57.795 33.333 0.00 0.00 36.80 1.52
68 69 8.677148 AGAAGTACTCTGCAACTGAATAAAAA 57.323 30.769 0.00 0.00 31.12 1.94
90 91 6.864360 AAATGTCAACAAATTTGGATGTGG 57.136 33.333 21.74 0.00 0.00 4.17
91 92 3.726607 TGTCAACAAATTTGGATGTGGC 58.273 40.909 21.74 14.83 0.00 5.01
92 93 3.133542 TGTCAACAAATTTGGATGTGGCA 59.866 39.130 21.74 16.91 0.00 4.92
93 94 4.202336 TGTCAACAAATTTGGATGTGGCAT 60.202 37.500 21.74 0.00 0.00 4.40
94 95 4.756135 GTCAACAAATTTGGATGTGGCATT 59.244 37.500 21.74 1.45 0.00 3.56
95 96 5.239087 GTCAACAAATTTGGATGTGGCATTT 59.761 36.000 21.74 0.75 0.00 2.32
96 97 5.238868 TCAACAAATTTGGATGTGGCATTTG 59.761 36.000 21.74 12.39 39.64 2.32
97 98 4.073549 ACAAATTTGGATGTGGCATTTGG 58.926 39.130 21.74 0.00 38.58 3.28
98 99 2.406596 ATTTGGATGTGGCATTTGGC 57.593 45.000 0.00 0.00 43.74 4.52
108 109 2.813100 GCATTTGGCCGAACACTTG 58.187 52.632 7.84 3.41 36.11 3.16
109 110 0.031994 GCATTTGGCCGAACACTTGT 59.968 50.000 7.84 0.00 36.11 3.16
110 111 1.930371 GCATTTGGCCGAACACTTGTC 60.930 52.381 7.84 0.00 36.11 3.18
111 112 1.336440 CATTTGGCCGAACACTTGTCA 59.664 47.619 7.84 0.00 0.00 3.58
112 113 1.021202 TTTGGCCGAACACTTGTCAG 58.979 50.000 0.00 0.00 0.00 3.51
113 114 0.817634 TTGGCCGAACACTTGTCAGG 60.818 55.000 0.00 0.16 0.00 3.86
114 115 1.227853 GGCCGAACACTTGTCAGGT 60.228 57.895 0.00 0.00 0.00 4.00
115 116 1.507141 GGCCGAACACTTGTCAGGTG 61.507 60.000 13.19 13.19 40.19 4.00
117 118 0.937304 CCGAACACTTGTCAGGTGTG 59.063 55.000 20.21 9.55 45.64 3.82
118 119 0.937304 CGAACACTTGTCAGGTGTGG 59.063 55.000 20.21 12.14 45.64 4.17
119 120 1.742411 CGAACACTTGTCAGGTGTGGT 60.742 52.381 20.21 6.80 45.64 4.16
120 121 1.670811 GAACACTTGTCAGGTGTGGTG 59.329 52.381 20.21 4.55 45.64 4.17
121 122 0.618458 ACACTTGTCAGGTGTGGTGT 59.382 50.000 18.99 4.45 44.82 4.16
122 123 1.299541 CACTTGTCAGGTGTGGTGTC 58.700 55.000 6.92 0.00 0.00 3.67
123 124 0.180406 ACTTGTCAGGTGTGGTGTCC 59.820 55.000 0.00 0.00 0.00 4.02
124 125 0.180171 CTTGTCAGGTGTGGTGTCCA 59.820 55.000 0.00 0.00 0.00 4.02
135 136 3.987404 GTGTCCACCATGGCTGAC 58.013 61.111 21.63 21.63 37.47 3.51
136 137 1.073025 GTGTCCACCATGGCTGACA 59.927 57.895 25.35 25.35 37.47 3.58
137 138 0.537143 GTGTCCACCATGGCTGACAA 60.537 55.000 28.81 15.97 39.26 3.18
138 139 0.405198 TGTCCACCATGGCTGACAAT 59.595 50.000 26.38 0.00 37.47 2.71
139 140 0.813184 GTCCACCATGGCTGACAATG 59.187 55.000 22.87 8.88 37.47 2.82
140 141 0.405198 TCCACCATGGCTGACAATGT 59.595 50.000 13.04 0.00 37.47 2.71
141 142 0.528924 CCACCATGGCTGACAATGTG 59.471 55.000 13.04 8.37 35.56 3.21
142 143 0.108992 CACCATGGCTGACAATGTGC 60.109 55.000 13.04 0.00 31.01 4.57
143 144 0.540133 ACCATGGCTGACAATGTGCA 60.540 50.000 13.04 0.00 0.00 4.57
144 145 0.172578 CCATGGCTGACAATGTGCAG 59.827 55.000 0.00 0.00 35.28 4.41
145 146 0.172578 CATGGCTGACAATGTGCAGG 59.827 55.000 12.34 0.00 32.83 4.85
146 147 0.968901 ATGGCTGACAATGTGCAGGG 60.969 55.000 12.34 0.00 32.83 4.45
147 148 2.345760 GGCTGACAATGTGCAGGGG 61.346 63.158 12.34 0.00 32.83 4.79
148 149 2.998279 GCTGACAATGTGCAGGGGC 61.998 63.158 12.34 0.00 41.68 5.80
149 150 2.672651 TGACAATGTGCAGGGGCG 60.673 61.111 0.00 0.00 45.35 6.13
150 151 3.443045 GACAATGTGCAGGGGCGG 61.443 66.667 0.00 0.00 45.35 6.13
151 152 3.918253 GACAATGTGCAGGGGCGGA 62.918 63.158 0.00 0.00 45.35 5.54
152 153 3.136123 CAATGTGCAGGGGCGGAG 61.136 66.667 0.00 0.00 45.35 4.63
153 154 4.431131 AATGTGCAGGGGCGGAGG 62.431 66.667 0.00 0.00 45.35 4.30
171 172 3.564455 GGTACCTAAGCATCGTCGG 57.436 57.895 4.06 0.00 0.00 4.79
172 173 1.027357 GGTACCTAAGCATCGTCGGA 58.973 55.000 4.06 0.00 0.00 4.55
173 174 1.268948 GGTACCTAAGCATCGTCGGAC 60.269 57.143 4.06 0.00 0.00 4.79
174 175 1.674962 GTACCTAAGCATCGTCGGACT 59.325 52.381 6.57 0.00 0.00 3.85
175 176 2.048444 ACCTAAGCATCGTCGGACTA 57.952 50.000 6.57 0.00 0.00 2.59
176 177 1.948145 ACCTAAGCATCGTCGGACTAG 59.052 52.381 6.57 0.19 0.00 2.57
177 178 1.267261 CCTAAGCATCGTCGGACTAGG 59.733 57.143 6.57 5.64 0.00 3.02
178 179 1.267261 CTAAGCATCGTCGGACTAGGG 59.733 57.143 6.57 0.00 0.00 3.53
179 180 1.392710 AAGCATCGTCGGACTAGGGG 61.393 60.000 6.57 0.00 0.00 4.79
180 181 2.728817 CATCGTCGGACTAGGGGC 59.271 66.667 6.57 0.00 0.00 5.80
181 182 1.828660 CATCGTCGGACTAGGGGCT 60.829 63.158 6.57 0.00 0.00 5.19
182 183 1.828660 ATCGTCGGACTAGGGGCTG 60.829 63.158 6.57 0.00 0.00 4.85
183 184 2.280404 ATCGTCGGACTAGGGGCTGA 62.280 60.000 6.57 0.00 0.00 4.26
184 185 2.050350 CGTCGGACTAGGGGCTGAA 61.050 63.158 6.57 0.00 0.00 3.02
185 186 1.601419 CGTCGGACTAGGGGCTGAAA 61.601 60.000 6.57 0.00 0.00 2.69
186 187 0.175989 GTCGGACTAGGGGCTGAAAG 59.824 60.000 0.00 0.00 0.00 2.62
187 188 0.976073 TCGGACTAGGGGCTGAAAGG 60.976 60.000 0.00 0.00 0.00 3.11
188 189 0.976073 CGGACTAGGGGCTGAAAGGA 60.976 60.000 0.00 0.00 0.00 3.36
189 190 0.833949 GGACTAGGGGCTGAAAGGAG 59.166 60.000 0.00 0.00 0.00 3.69
190 191 0.833949 GACTAGGGGCTGAAAGGAGG 59.166 60.000 0.00 0.00 0.00 4.30
191 192 1.275421 ACTAGGGGCTGAAAGGAGGC 61.275 60.000 0.00 0.00 37.80 4.70
192 193 2.317149 CTAGGGGCTGAAAGGAGGCG 62.317 65.000 0.00 0.00 39.42 5.52
193 194 4.035102 GGGGCTGAAAGGAGGCGT 62.035 66.667 0.00 0.00 39.42 5.68
194 195 2.666098 GGGGCTGAAAGGAGGCGTA 61.666 63.158 0.00 0.00 39.42 4.42
195 196 1.153349 GGGCTGAAAGGAGGCGTAG 60.153 63.158 0.00 0.00 39.42 3.51
196 197 1.153349 GGCTGAAAGGAGGCGTAGG 60.153 63.158 0.00 0.00 0.00 3.18
232 233 4.162690 GGATGGAGCGGCGAAGGT 62.163 66.667 12.98 0.00 0.00 3.50
233 234 2.586357 GATGGAGCGGCGAAGGTC 60.586 66.667 12.98 0.07 37.86 3.85
240 241 3.423154 CGGCGAAGGTCCAGCAAC 61.423 66.667 0.00 0.00 0.00 4.17
241 242 3.423154 GGCGAAGGTCCAGCAACG 61.423 66.667 6.38 0.00 0.00 4.10
242 243 4.090057 GCGAAGGTCCAGCAACGC 62.090 66.667 0.00 0.00 39.33 4.84
243 244 3.423154 CGAAGGTCCAGCAACGCC 61.423 66.667 0.00 0.00 0.00 5.68
244 245 2.032681 GAAGGTCCAGCAACGCCT 59.967 61.111 0.00 0.00 0.00 5.52
245 246 2.281761 AAGGTCCAGCAACGCCTG 60.282 61.111 0.00 0.00 0.00 4.85
251 252 4.954970 CAGCAACGCCTGGGTGGT 62.955 66.667 5.15 0.00 38.35 4.16
252 253 3.246112 AGCAACGCCTGGGTGGTA 61.246 61.111 5.15 0.00 38.35 3.25
253 254 2.746277 GCAACGCCTGGGTGGTAG 60.746 66.667 5.15 0.00 38.35 3.18
254 255 3.065306 CAACGCCTGGGTGGTAGA 58.935 61.111 5.15 0.00 38.35 2.59
255 256 1.079127 CAACGCCTGGGTGGTAGAG 60.079 63.158 5.15 0.00 38.35 2.43
256 257 1.535687 AACGCCTGGGTGGTAGAGT 60.536 57.895 5.15 0.00 38.35 3.24
257 258 1.827399 AACGCCTGGGTGGTAGAGTG 61.827 60.000 5.15 0.00 38.35 3.51
258 259 2.990479 GCCTGGGTGGTAGAGTGG 59.010 66.667 0.00 0.00 38.35 4.00
259 260 2.670148 GCCTGGGTGGTAGAGTGGG 61.670 68.421 0.00 0.00 38.35 4.61
260 261 1.229529 CCTGGGTGGTAGAGTGGGT 60.230 63.158 0.00 0.00 0.00 4.51
261 262 1.553690 CCTGGGTGGTAGAGTGGGTG 61.554 65.000 0.00 0.00 0.00 4.61
262 263 1.537889 TGGGTGGTAGAGTGGGTGG 60.538 63.158 0.00 0.00 0.00 4.61
263 264 1.538135 GGGTGGTAGAGTGGGTGGT 60.538 63.158 0.00 0.00 0.00 4.16
264 265 0.252375 GGGTGGTAGAGTGGGTGGTA 60.252 60.000 0.00 0.00 0.00 3.25
265 266 0.900421 GGTGGTAGAGTGGGTGGTAC 59.100 60.000 0.00 0.00 0.00 3.34
266 267 1.636148 GTGGTAGAGTGGGTGGTACA 58.364 55.000 0.00 0.00 0.00 2.90
267 268 1.549170 GTGGTAGAGTGGGTGGTACAG 59.451 57.143 0.00 0.00 41.80 2.74
286 287 4.590487 GGCGACGACATTCTTGGA 57.410 55.556 0.00 0.00 0.00 3.53
287 288 2.079049 GGCGACGACATTCTTGGAC 58.921 57.895 0.00 0.00 0.00 4.02
288 289 0.389948 GGCGACGACATTCTTGGACT 60.390 55.000 0.00 0.00 0.00 3.85
289 290 1.135199 GGCGACGACATTCTTGGACTA 60.135 52.381 0.00 0.00 0.00 2.59
290 291 1.918609 GCGACGACATTCTTGGACTAC 59.081 52.381 0.00 0.00 0.00 2.73
291 292 2.670229 GCGACGACATTCTTGGACTACA 60.670 50.000 0.00 0.00 0.00 2.74
292 293 2.915463 CGACGACATTCTTGGACTACAC 59.085 50.000 0.00 0.00 0.00 2.90
293 294 3.610821 CGACGACATTCTTGGACTACACA 60.611 47.826 0.00 0.00 0.00 3.72
294 295 3.914312 ACGACATTCTTGGACTACACAG 58.086 45.455 0.00 0.00 0.00 3.66
295 296 3.572682 ACGACATTCTTGGACTACACAGA 59.427 43.478 0.00 0.00 0.00 3.41
296 297 4.220821 ACGACATTCTTGGACTACACAGAT 59.779 41.667 0.00 0.00 0.00 2.90
297 298 5.417894 ACGACATTCTTGGACTACACAGATA 59.582 40.000 0.00 0.00 0.00 1.98
298 299 5.744345 CGACATTCTTGGACTACACAGATAC 59.256 44.000 0.00 0.00 0.00 2.24
299 300 6.605471 ACATTCTTGGACTACACAGATACA 57.395 37.500 0.00 0.00 0.00 2.29
300 301 6.634805 ACATTCTTGGACTACACAGATACAG 58.365 40.000 0.00 0.00 0.00 2.74
301 302 6.437477 ACATTCTTGGACTACACAGATACAGA 59.563 38.462 0.00 0.00 0.00 3.41
302 303 6.516739 TTCTTGGACTACACAGATACAGAG 57.483 41.667 0.00 0.00 0.00 3.35
303 304 4.950475 TCTTGGACTACACAGATACAGAGG 59.050 45.833 0.00 0.00 0.00 3.69
304 305 4.586306 TGGACTACACAGATACAGAGGA 57.414 45.455 0.00 0.00 0.00 3.71
305 306 4.527944 TGGACTACACAGATACAGAGGAG 58.472 47.826 0.00 0.00 0.00 3.69
306 307 3.886505 GGACTACACAGATACAGAGGAGG 59.113 52.174 0.00 0.00 0.00 4.30
307 308 3.886505 GACTACACAGATACAGAGGAGGG 59.113 52.174 0.00 0.00 0.00 4.30
308 309 2.166907 ACACAGATACAGAGGAGGGG 57.833 55.000 0.00 0.00 0.00 4.79
309 310 1.343478 ACACAGATACAGAGGAGGGGG 60.343 57.143 0.00 0.00 0.00 5.40
337 338 1.863267 CGAAGCAAGGCTCTAGATGG 58.137 55.000 0.00 0.00 38.25 3.51
338 339 1.539929 CGAAGCAAGGCTCTAGATGGG 60.540 57.143 0.00 0.00 38.25 4.00
339 340 1.488393 GAAGCAAGGCTCTAGATGGGT 59.512 52.381 0.00 0.00 38.25 4.51
340 341 1.589414 AGCAAGGCTCTAGATGGGTT 58.411 50.000 0.00 0.00 30.62 4.11
341 342 1.918957 AGCAAGGCTCTAGATGGGTTT 59.081 47.619 0.00 0.00 30.62 3.27
342 343 2.310052 AGCAAGGCTCTAGATGGGTTTT 59.690 45.455 0.00 0.00 30.62 2.43
343 344 3.092301 GCAAGGCTCTAGATGGGTTTTT 58.908 45.455 0.00 0.00 0.00 1.94
362 363 2.830651 TTTTGTGGGTACTTGTGGGT 57.169 45.000 0.00 0.00 0.00 4.51
363 364 2.060050 TTTGTGGGTACTTGTGGGTG 57.940 50.000 0.00 0.00 0.00 4.61
364 365 0.920438 TTGTGGGTACTTGTGGGTGT 59.080 50.000 0.00 0.00 0.00 4.16
365 366 0.470766 TGTGGGTACTTGTGGGTGTC 59.529 55.000 0.00 0.00 0.00 3.67
366 367 0.601841 GTGGGTACTTGTGGGTGTCG 60.602 60.000 0.00 0.00 0.00 4.35
367 368 1.004200 GGGTACTTGTGGGTGTCGG 60.004 63.158 0.00 0.00 0.00 4.79
368 369 1.474332 GGGTACTTGTGGGTGTCGGA 61.474 60.000 0.00 0.00 0.00 4.55
369 370 0.320160 GGTACTTGTGGGTGTCGGAC 60.320 60.000 0.00 0.00 0.00 4.79
370 371 0.677842 GTACTTGTGGGTGTCGGACT 59.322 55.000 9.88 0.00 0.00 3.85
371 372 0.963962 TACTTGTGGGTGTCGGACTC 59.036 55.000 9.88 5.65 0.00 3.36
372 373 1.004918 CTTGTGGGTGTCGGACTCC 60.005 63.158 18.58 18.58 0.00 3.85
373 374 1.458777 TTGTGGGTGTCGGACTCCT 60.459 57.895 23.94 0.00 32.60 3.69
374 375 0.178955 TTGTGGGTGTCGGACTCCTA 60.179 55.000 23.94 17.85 32.60 2.94
375 376 0.040646 TGTGGGTGTCGGACTCCTAT 59.959 55.000 23.94 0.00 32.60 2.57
376 377 0.460311 GTGGGTGTCGGACTCCTATG 59.540 60.000 23.94 0.00 32.60 2.23
377 378 0.040646 TGGGTGTCGGACTCCTATGT 59.959 55.000 23.94 0.00 32.60 2.29
378 379 0.460311 GGGTGTCGGACTCCTATGTG 59.540 60.000 23.94 0.00 32.60 3.21
379 380 0.460311 GGTGTCGGACTCCTATGTGG 59.540 60.000 19.31 0.00 37.10 4.17
380 381 0.179108 GTGTCGGACTCCTATGTGGC 60.179 60.000 9.88 0.00 35.26 5.01
381 382 1.065928 GTCGGACTCCTATGTGGCG 59.934 63.158 0.00 0.00 35.26 5.69
382 383 2.125326 TCGGACTCCTATGTGGCGG 61.125 63.158 0.00 0.00 35.26 6.13
383 384 2.423898 CGGACTCCTATGTGGCGGT 61.424 63.158 0.00 0.00 35.26 5.68
384 385 1.905512 GGACTCCTATGTGGCGGTT 59.094 57.895 0.00 0.00 35.26 4.44
385 386 0.462047 GGACTCCTATGTGGCGGTTG 60.462 60.000 0.00 0.00 35.26 3.77
386 387 0.249398 GACTCCTATGTGGCGGTTGT 59.751 55.000 0.00 0.00 35.26 3.32
387 388 0.249398 ACTCCTATGTGGCGGTTGTC 59.751 55.000 0.00 0.00 35.26 3.18
388 389 0.462047 CTCCTATGTGGCGGTTGTCC 60.462 60.000 0.00 0.00 35.26 4.02
398 399 3.351450 GGTTGTCCGCAAACCTCC 58.649 61.111 5.22 0.00 36.34 4.30
399 400 2.265904 GGTTGTCCGCAAACCTCCC 61.266 63.158 5.22 0.00 36.34 4.30
400 401 1.527380 GTTGTCCGCAAACCTCCCA 60.527 57.895 0.00 0.00 36.22 4.37
401 402 1.228124 TTGTCCGCAAACCTCCCAG 60.228 57.895 0.00 0.00 0.00 4.45
402 403 1.990160 TTGTCCGCAAACCTCCCAGT 61.990 55.000 0.00 0.00 0.00 4.00
403 404 1.228154 GTCCGCAAACCTCCCAGTT 60.228 57.895 0.00 0.00 0.00 3.16
404 405 0.822121 GTCCGCAAACCTCCCAGTTT 60.822 55.000 0.00 0.00 40.57 2.66
405 406 0.106419 TCCGCAAACCTCCCAGTTTT 60.106 50.000 0.00 0.00 37.87 2.43
406 407 0.031994 CCGCAAACCTCCCAGTTTTG 59.968 55.000 0.00 0.00 37.87 2.44
407 408 0.597377 CGCAAACCTCCCAGTTTTGC 60.597 55.000 8.12 8.12 37.87 3.68
408 409 0.752658 GCAAACCTCCCAGTTTTGCT 59.247 50.000 10.34 0.00 37.87 3.91
409 410 1.138859 GCAAACCTCCCAGTTTTGCTT 59.861 47.619 10.34 0.00 37.87 3.91
410 411 2.803133 GCAAACCTCCCAGTTTTGCTTC 60.803 50.000 10.34 0.00 37.87 3.86
411 412 1.704641 AACCTCCCAGTTTTGCTTCC 58.295 50.000 0.00 0.00 0.00 3.46
412 413 0.537371 ACCTCCCAGTTTTGCTTCCG 60.537 55.000 0.00 0.00 0.00 4.30
413 414 1.244019 CCTCCCAGTTTTGCTTCCGG 61.244 60.000 0.00 0.00 0.00 5.14
414 415 0.537371 CTCCCAGTTTTGCTTCCGGT 60.537 55.000 0.00 0.00 0.00 5.28
415 416 0.106419 TCCCAGTTTTGCTTCCGGTT 60.106 50.000 0.00 0.00 0.00 4.44
416 417 0.750249 CCCAGTTTTGCTTCCGGTTT 59.250 50.000 0.00 0.00 0.00 3.27
417 418 1.537990 CCCAGTTTTGCTTCCGGTTTG 60.538 52.381 0.00 0.00 0.00 2.93
418 419 1.136110 CCAGTTTTGCTTCCGGTTTGT 59.864 47.619 0.00 0.00 0.00 2.83
419 420 2.359531 CCAGTTTTGCTTCCGGTTTGTA 59.640 45.455 0.00 0.00 0.00 2.41
420 421 3.550030 CCAGTTTTGCTTCCGGTTTGTAG 60.550 47.826 0.00 0.00 0.00 2.74
421 422 2.621526 AGTTTTGCTTCCGGTTTGTAGG 59.378 45.455 0.00 0.00 0.00 3.18
422 423 2.619646 GTTTTGCTTCCGGTTTGTAGGA 59.380 45.455 0.00 0.00 34.19 2.94
423 424 2.642154 TTGCTTCCGGTTTGTAGGAA 57.358 45.000 0.00 0.00 43.57 3.36
424 425 2.871096 TGCTTCCGGTTTGTAGGAAT 57.129 45.000 0.00 0.00 44.55 3.01
425 426 3.149005 TGCTTCCGGTTTGTAGGAATT 57.851 42.857 0.00 0.00 44.55 2.17
426 427 3.492337 TGCTTCCGGTTTGTAGGAATTT 58.508 40.909 0.00 0.00 44.55 1.82
427 428 4.653868 TGCTTCCGGTTTGTAGGAATTTA 58.346 39.130 0.00 0.00 44.55 1.40
428 429 4.698304 TGCTTCCGGTTTGTAGGAATTTAG 59.302 41.667 0.00 0.00 44.55 1.85
429 430 4.939439 GCTTCCGGTTTGTAGGAATTTAGA 59.061 41.667 0.00 0.00 44.55 2.10
430 431 5.163784 GCTTCCGGTTTGTAGGAATTTAGAC 60.164 44.000 0.00 0.00 44.55 2.59
431 432 4.497300 TCCGGTTTGTAGGAATTTAGACG 58.503 43.478 0.00 0.00 32.86 4.18
432 433 4.021192 TCCGGTTTGTAGGAATTTAGACGT 60.021 41.667 0.00 0.00 32.86 4.34
433 434 5.184864 TCCGGTTTGTAGGAATTTAGACGTA 59.815 40.000 0.00 0.00 32.86 3.57
434 435 6.044682 CCGGTTTGTAGGAATTTAGACGTAT 58.955 40.000 0.00 0.00 0.00 3.06
435 436 6.536224 CCGGTTTGTAGGAATTTAGACGTATT 59.464 38.462 0.00 0.00 0.00 1.89
436 437 7.396419 CGGTTTGTAGGAATTTAGACGTATTG 58.604 38.462 0.00 0.00 0.00 1.90
437 438 7.276218 CGGTTTGTAGGAATTTAGACGTATTGA 59.724 37.037 0.00 0.00 0.00 2.57
438 439 8.385858 GGTTTGTAGGAATTTAGACGTATTGAC 58.614 37.037 0.00 0.00 0.00 3.18
439 440 8.385858 GTTTGTAGGAATTTAGACGTATTGACC 58.614 37.037 0.00 0.00 0.00 4.02
440 441 6.267817 TGTAGGAATTTAGACGTATTGACCG 58.732 40.000 0.00 0.00 0.00 4.79
441 442 4.690122 AGGAATTTAGACGTATTGACCGG 58.310 43.478 0.00 0.00 0.00 5.28
442 443 4.161001 AGGAATTTAGACGTATTGACCGGT 59.839 41.667 6.92 6.92 0.00 5.28
443 444 4.505556 GGAATTTAGACGTATTGACCGGTC 59.494 45.833 28.17 28.17 0.00 4.79
444 445 3.508744 TTTAGACGTATTGACCGGTCC 57.491 47.619 31.19 14.94 0.00 4.46
445 446 1.016627 TAGACGTATTGACCGGTCCG 58.983 55.000 31.19 27.00 0.00 4.79
446 447 1.875364 GACGTATTGACCGGTCCGC 60.875 63.158 31.19 17.82 0.00 5.54
447 448 2.952783 CGTATTGACCGGTCCGCG 60.953 66.667 31.19 23.43 0.00 6.46
448 449 2.584143 GTATTGACCGGTCCGCGG 60.584 66.667 31.19 22.12 0.00 6.46
449 450 2.755064 TATTGACCGGTCCGCGGA 60.755 61.111 31.19 27.28 0.00 5.54
450 451 3.067480 TATTGACCGGTCCGCGGAC 62.067 63.158 43.30 43.30 43.87 4.79
455 456 4.418401 CCGGTCCGCGGACGTTAA 62.418 66.667 42.69 15.29 45.41 2.01
456 457 2.202650 CGGTCCGCGGACGTTAAT 60.203 61.111 42.69 0.00 45.41 1.40
457 458 2.510594 CGGTCCGCGGACGTTAATG 61.511 63.158 42.69 26.74 45.41 1.90
458 459 2.699212 GTCCGCGGACGTTAATGC 59.301 61.111 39.77 17.32 37.70 3.56
459 460 2.095847 GTCCGCGGACGTTAATGCA 61.096 57.895 39.77 7.21 37.70 3.96
460 461 1.153529 TCCGCGGACGTTAATGCAT 60.154 52.632 27.28 0.00 37.70 3.96
461 462 1.011242 CCGCGGACGTTAATGCATG 60.011 57.895 24.07 0.00 37.70 4.06
462 463 1.011242 CGCGGACGTTAATGCATGG 60.011 57.895 0.00 0.00 33.53 3.66
463 464 1.298339 GCGGACGTTAATGCATGGC 60.298 57.895 0.00 0.00 0.00 4.40
464 465 1.011242 CGGACGTTAATGCATGGCG 60.011 57.895 0.00 8.11 0.00 5.69
465 466 1.701545 CGGACGTTAATGCATGGCGT 61.702 55.000 18.82 18.82 38.55 5.68
466 467 0.450184 GGACGTTAATGCATGGCGTT 59.550 50.000 19.45 0.98 41.00 4.84
467 468 1.534028 GACGTTAATGCATGGCGTTG 58.466 50.000 19.45 4.24 38.31 4.10
468 469 0.170116 ACGTTAATGCATGGCGTTGG 59.830 50.000 14.82 0.00 38.31 3.77
469 470 0.449786 CGTTAATGCATGGCGTTGGA 59.550 50.000 0.00 0.00 38.31 3.53
470 471 1.065401 CGTTAATGCATGGCGTTGGAT 59.935 47.619 0.00 0.00 38.31 3.41
471 472 2.462889 GTTAATGCATGGCGTTGGATG 58.537 47.619 0.00 0.00 38.31 3.51
472 473 2.049888 TAATGCATGGCGTTGGATGA 57.950 45.000 0.00 0.00 38.31 2.92
473 474 0.457035 AATGCATGGCGTTGGATGAC 59.543 50.000 0.00 0.00 36.34 3.06
497 498 1.095228 AGTGTTTGGACCGCACTGTG 61.095 55.000 13.25 2.76 41.33 3.66
510 511 1.737236 GCACTGTGCGGACATTTATCA 59.263 47.619 17.93 0.00 31.71 2.15
512 513 3.181497 GCACTGTGCGGACATTTATCAAT 60.181 43.478 17.93 0.00 31.71 2.57
662 664 1.387084 GTTTCAGACTAACTGCGAGCG 59.613 52.381 0.00 0.00 45.38 5.03
666 668 1.651138 CAGACTAACTGCGAGCGAAAG 59.349 52.381 0.00 0.00 39.86 2.62
669 671 2.729882 GACTAACTGCGAGCGAAAGAAA 59.270 45.455 0.00 0.00 0.00 2.52
675 677 2.923655 CTGCGAGCGAAAGAAACATAGA 59.076 45.455 0.00 0.00 0.00 1.98
678 680 3.241804 GCGAGCGAAAGAAACATAGACTG 60.242 47.826 0.00 0.00 0.00 3.51
814 816 3.138518 AGATATCCCCCAAACCATTCCA 58.861 45.455 0.00 0.00 0.00 3.53
852 854 0.976073 TCCTGACCTCGTCCATTCCC 60.976 60.000 0.00 0.00 0.00 3.97
853 855 0.978146 CCTGACCTCGTCCATTCCCT 60.978 60.000 0.00 0.00 0.00 4.20
854 856 0.905357 CTGACCTCGTCCATTCCCTT 59.095 55.000 0.00 0.00 0.00 3.95
855 857 0.902531 TGACCTCGTCCATTCCCTTC 59.097 55.000 0.00 0.00 0.00 3.46
903 905 1.466856 TACCACTGATTCGCCGTACT 58.533 50.000 0.00 0.00 0.00 2.73
904 906 1.466856 ACCACTGATTCGCCGTACTA 58.533 50.000 0.00 0.00 0.00 1.82
905 907 1.820519 ACCACTGATTCGCCGTACTAA 59.179 47.619 0.00 0.00 0.00 2.24
906 908 2.190981 CCACTGATTCGCCGTACTAAC 58.809 52.381 0.00 0.00 0.00 2.34
907 909 2.159282 CCACTGATTCGCCGTACTAACT 60.159 50.000 0.00 0.00 0.00 2.24
908 910 2.852413 CACTGATTCGCCGTACTAACTG 59.148 50.000 0.00 0.00 0.00 3.16
909 911 2.751259 ACTGATTCGCCGTACTAACTGA 59.249 45.455 0.00 0.00 0.00 3.41
910 912 3.106672 CTGATTCGCCGTACTAACTGAC 58.893 50.000 0.00 0.00 0.00 3.51
911 913 2.159338 TGATTCGCCGTACTAACTGACC 60.159 50.000 0.00 0.00 0.00 4.02
912 914 1.246649 TTCGCCGTACTAACTGACCA 58.753 50.000 0.00 0.00 0.00 4.02
913 915 0.523072 TCGCCGTACTAACTGACCAC 59.477 55.000 0.00 0.00 0.00 4.16
914 916 0.457337 CGCCGTACTAACTGACCACC 60.457 60.000 0.00 0.00 0.00 4.61
915 917 0.457337 GCCGTACTAACTGACCACCG 60.457 60.000 0.00 0.00 0.00 4.94
916 918 0.457337 CCGTACTAACTGACCACCGC 60.457 60.000 0.00 0.00 0.00 5.68
917 919 0.457337 CGTACTAACTGACCACCGCC 60.457 60.000 0.00 0.00 0.00 6.13
918 920 0.457337 GTACTAACTGACCACCGCCG 60.457 60.000 0.00 0.00 0.00 6.46
919 921 0.895100 TACTAACTGACCACCGCCGT 60.895 55.000 0.00 0.00 0.00 5.68
920 922 0.895100 ACTAACTGACCACCGCCGTA 60.895 55.000 0.00 0.00 0.00 4.02
921 923 0.179145 CTAACTGACCACCGCCGTAG 60.179 60.000 0.00 0.00 0.00 3.51
922 924 2.216750 TAACTGACCACCGCCGTAGC 62.217 60.000 0.00 0.00 0.00 3.58
968 970 4.569180 CCCTCCGGATGCGGCATT 62.569 66.667 22.35 0.42 0.00 3.56
969 971 3.282157 CCTCCGGATGCGGCATTG 61.282 66.667 22.35 12.49 0.00 2.82
970 972 3.957535 CTCCGGATGCGGCATTGC 61.958 66.667 22.35 4.97 0.00 3.56
993 995 4.222847 GGCGATCACGGGGAGGAC 62.223 72.222 0.00 0.00 40.15 3.85
994 996 4.570663 GCGATCACGGGGAGGACG 62.571 72.222 0.00 0.00 40.15 4.79
995 997 3.900892 CGATCACGGGGAGGACGG 61.901 72.222 0.00 0.00 35.72 4.79
996 998 4.222847 GATCACGGGGAGGACGGC 62.223 72.222 0.00 0.00 35.23 5.68
999 1001 4.760047 CACGGGGAGGACGGCAAG 62.760 72.222 0.00 0.00 35.23 4.01
1217 1437 2.199208 TGATCCTTGATCCTGCCTGAA 58.801 47.619 1.88 0.00 38.20 3.02
1221 1441 1.407979 CCTTGATCCTGCCTGAAATGC 59.592 52.381 0.00 0.00 0.00 3.56
1408 1628 7.630242 AGGTGACAAAAATAATCGATCACAT 57.370 32.000 0.00 0.00 37.34 3.21
1409 1629 8.055279 AGGTGACAAAAATAATCGATCACATT 57.945 30.769 0.00 0.00 37.34 2.71
1410 1630 8.522830 AGGTGACAAAAATAATCGATCACATTT 58.477 29.630 0.00 2.71 37.34 2.32
1411 1631 9.781834 GGTGACAAAAATAATCGATCACATTTA 57.218 29.630 0.00 0.00 37.34 1.40
1423 1643 3.822594 TCACATTTACACGCCATCAAC 57.177 42.857 0.00 0.00 0.00 3.18
1462 1694 7.063544 CGTCTCCATAGTTTTCTTCTCGAAATT 59.936 37.037 0.00 0.00 41.04 1.82
1463 1695 8.171840 GTCTCCATAGTTTTCTTCTCGAAATTG 58.828 37.037 0.00 0.00 41.04 2.32
1493 1725 2.761767 TCCCGATGAGTTTCCGATACAA 59.238 45.455 0.00 0.00 0.00 2.41
1494 1726 3.123804 CCCGATGAGTTTCCGATACAAG 58.876 50.000 0.00 0.00 0.00 3.16
1503 1735 5.717119 AGTTTCCGATACAAGTACGAATGT 58.283 37.500 7.09 7.09 0.00 2.71
1504 1736 5.803967 AGTTTCCGATACAAGTACGAATGTC 59.196 40.000 5.46 0.00 0.00 3.06
1511 1743 4.233123 ACAAGTACGAATGTCTGAACGA 57.767 40.909 0.00 0.00 0.00 3.85
1589 1821 0.182061 ATCTGGTCTCGGCATTGCAT 59.818 50.000 11.39 0.00 0.00 3.96
1673 1905 1.313091 GGCCGGGGATCAAGTTTGAC 61.313 60.000 2.18 0.00 40.49 3.18
1687 1919 3.821748 AGTTTGACTCTTCAGGTTTCCC 58.178 45.455 0.00 0.00 31.71 3.97
1688 1920 3.459969 AGTTTGACTCTTCAGGTTTCCCT 59.540 43.478 0.00 0.00 44.02 4.20
1742 2030 6.233434 TCATCTCAGCTACTGAAATTGTGTT 58.767 36.000 0.00 0.00 40.18 3.32
1757 2045 1.762370 TGTGTTCAGACTTGCCTCTCA 59.238 47.619 0.00 0.00 0.00 3.27
1761 2049 3.181451 TGTTCAGACTTGCCTCTCATGTT 60.181 43.478 0.00 0.00 33.75 2.71
1923 2212 6.911756 GCATATCGCATGTAAAGAAAAACAC 58.088 36.000 0.00 0.00 41.79 3.32
1926 2215 6.991485 ATCGCATGTAAAGAAAAACACAAG 57.009 33.333 0.00 0.00 0.00 3.16
1928 2217 5.066634 TCGCATGTAAAGAAAAACACAAGGA 59.933 36.000 0.00 0.00 0.00 3.36
1929 2218 5.920273 CGCATGTAAAGAAAAACACAAGGAT 59.080 36.000 0.00 0.00 0.00 3.24
1930 2219 6.420604 CGCATGTAAAGAAAAACACAAGGATT 59.579 34.615 0.00 0.00 0.00 3.01
1931 2220 7.042791 CGCATGTAAAGAAAAACACAAGGATTT 60.043 33.333 0.00 0.00 0.00 2.17
1932 2221 8.063630 GCATGTAAAGAAAAACACAAGGATTTG 58.936 33.333 0.00 0.00 40.24 2.32
1933 2222 8.550376 CATGTAAAGAAAAACACAAGGATTTGG 58.450 33.333 0.00 0.00 38.66 3.28
1934 2223 7.616313 TGTAAAGAAAAACACAAGGATTTGGT 58.384 30.769 0.00 0.00 38.66 3.67
1935 2224 8.097662 TGTAAAGAAAAACACAAGGATTTGGTT 58.902 29.630 0.00 0.00 38.66 3.67
1936 2225 7.609760 AAAGAAAAACACAAGGATTTGGTTC 57.390 32.000 0.00 0.00 38.66 3.62
1937 2226 6.544928 AGAAAAACACAAGGATTTGGTTCT 57.455 33.333 0.00 0.00 38.66 3.01
1938 2227 6.573434 AGAAAAACACAAGGATTTGGTTCTC 58.427 36.000 0.00 0.00 38.66 2.87
1939 2228 6.381133 AGAAAAACACAAGGATTTGGTTCTCT 59.619 34.615 0.00 0.00 38.66 3.10
1940 2229 6.544928 AAAACACAAGGATTTGGTTCTCTT 57.455 33.333 0.00 0.00 38.66 2.85
1941 2230 6.544928 AAACACAAGGATTTGGTTCTCTTT 57.455 33.333 0.00 0.00 38.66 2.52
1942 2231 5.774498 ACACAAGGATTTGGTTCTCTTTC 57.226 39.130 0.00 0.00 38.66 2.62
1943 2232 5.200483 ACACAAGGATTTGGTTCTCTTTCA 58.800 37.500 0.00 0.00 38.66 2.69
1944 2233 5.300286 ACACAAGGATTTGGTTCTCTTTCAG 59.700 40.000 0.00 0.00 38.66 3.02
1945 2234 5.532406 CACAAGGATTTGGTTCTCTTTCAGA 59.468 40.000 0.00 0.00 38.66 3.27
1946 2235 5.767168 ACAAGGATTTGGTTCTCTTTCAGAG 59.233 40.000 0.00 0.00 39.88 3.35
1947 2236 5.574970 AGGATTTGGTTCTCTTTCAGAGT 57.425 39.130 0.75 0.00 42.83 3.24
1948 2237 5.946486 AGGATTTGGTTCTCTTTCAGAGTT 58.054 37.500 0.75 0.00 42.83 3.01
1949 2238 5.767168 AGGATTTGGTTCTCTTTCAGAGTTG 59.233 40.000 0.75 0.00 42.83 3.16
1950 2239 5.048434 GGATTTGGTTCTCTTTCAGAGTTGG 60.048 44.000 0.75 0.00 42.83 3.77
1951 2240 4.771114 TTGGTTCTCTTTCAGAGTTGGA 57.229 40.909 0.75 0.00 42.83 3.53
1952 2241 4.771114 TGGTTCTCTTTCAGAGTTGGAA 57.229 40.909 0.75 0.00 42.83 3.53
1953 2242 4.451900 TGGTTCTCTTTCAGAGTTGGAAC 58.548 43.478 0.75 0.00 42.83 3.62
1954 2243 3.815962 GGTTCTCTTTCAGAGTTGGAACC 59.184 47.826 0.00 0.00 42.83 3.62
1955 2244 4.451900 GTTCTCTTTCAGAGTTGGAACCA 58.548 43.478 0.75 0.00 42.83 3.67
1956 2245 4.771114 TCTCTTTCAGAGTTGGAACCAA 57.229 40.909 1.83 1.83 42.83 3.67
2049 2338 0.902531 AGGAATCGGAGGCTTTTCGA 59.097 50.000 10.07 10.07 37.33 3.71
2085 2374 0.109532 TCCGGATCAAACAGGCAACA 59.890 50.000 0.00 0.00 41.41 3.33
2111 2400 1.388547 GCCTCGTGCCCATTAAATCA 58.611 50.000 0.00 0.00 0.00 2.57
2124 2413 8.592809 TGCCCATTAAATCAATTTCTGTAAACT 58.407 29.630 0.00 0.00 0.00 2.66
2142 2558 1.263776 CTGCTAGCAGTCGACTTTCG 58.736 55.000 32.46 6.14 39.10 3.46
2186 2602 0.107557 ATGTGATGTGATGCGCAGGA 60.108 50.000 18.32 0.57 0.00 3.86
2218 2634 1.005215 ACCTCATTTCTGAAGGCCTGG 59.995 52.381 5.69 0.39 0.00 4.45
2306 2722 6.518493 CATGCATAATAACCCAAGCTGAATT 58.482 36.000 0.00 0.00 0.00 2.17
2307 2723 5.904941 TGCATAATAACCCAAGCTGAATTG 58.095 37.500 0.00 0.00 0.00 2.32
2309 2725 5.979517 GCATAATAACCCAAGCTGAATTGAC 59.020 40.000 0.00 0.00 31.55 3.18
2313 2741 3.515602 ACCCAAGCTGAATTGACTCTT 57.484 42.857 0.00 0.00 31.55 2.85
2337 2765 5.871524 TGAGCTACAATTGACTCTTGATGAC 59.128 40.000 13.59 0.00 0.00 3.06
2448 2876 3.463048 AATGCTTTCTGGTCCATCCTT 57.537 42.857 0.00 0.00 37.07 3.36
2474 2902 7.391554 TCTGTCTTTTCCATAGATGAAAACTGG 59.608 37.037 0.00 0.00 0.00 4.00
2575 3003 1.480137 TCAACCAGGTTGGCTTTGTTG 59.520 47.619 28.83 4.19 42.67 3.33
2751 3183 0.517316 CAAGTAAGCACTCGCCAACC 59.483 55.000 0.00 0.00 39.83 3.77
2778 3210 3.887110 TGATTATGCTCCAAGCCAATCTG 59.113 43.478 17.23 0.00 41.51 2.90
2809 3244 6.860023 CAGTTTTCATCTCACAATCTCAAACC 59.140 38.462 0.00 0.00 0.00 3.27
2998 3447 8.276060 TCATTATTACTTTTGCAAACGACAAC 57.724 30.769 21.18 0.00 0.00 3.32
3000 3449 7.901874 TTATTACTTTTGCAAACGACAACTC 57.098 32.000 21.18 0.00 0.00 3.01
3002 3451 2.108700 CTTTTGCAAACGACAACTCCG 58.891 47.619 12.39 0.00 0.00 4.63
3003 3452 0.248296 TTTGCAAACGACAACTCCGC 60.248 50.000 8.05 0.00 0.00 5.54
3004 3453 1.092921 TTGCAAACGACAACTCCGCT 61.093 50.000 0.00 0.00 0.00 5.52
3006 3455 1.860078 CAAACGACAACTCCGCTCC 59.140 57.895 0.00 0.00 0.00 4.70
3007 3456 0.878523 CAAACGACAACTCCGCTCCA 60.879 55.000 0.00 0.00 0.00 3.86
3009 3458 2.023414 AACGACAACTCCGCTCCACA 62.023 55.000 0.00 0.00 0.00 4.17
3010 3459 1.300620 CGACAACTCCGCTCCACAA 60.301 57.895 0.00 0.00 0.00 3.33
3011 3460 1.557443 CGACAACTCCGCTCCACAAC 61.557 60.000 0.00 0.00 0.00 3.32
3013 3462 0.249911 ACAACTCCGCTCCACAACTC 60.250 55.000 0.00 0.00 0.00 3.01
3014 3463 0.951040 CAACTCCGCTCCACAACTCC 60.951 60.000 0.00 0.00 0.00 3.85
3015 3464 2.125912 CTCCGCTCCACAACTCCG 60.126 66.667 0.00 0.00 0.00 4.63
3016 3465 3.649277 CTCCGCTCCACAACTCCGG 62.649 68.421 0.00 0.00 40.25 5.14
3018 3467 3.691342 CGCTCCACAACTCCGGGA 61.691 66.667 0.00 0.00 0.00 5.14
3020 3469 2.266055 CTCCACAACTCCGGGAGC 59.734 66.667 23.84 0.00 41.53 4.70
3021 3470 3.649277 CTCCACAACTCCGGGAGCG 62.649 68.421 23.84 17.06 41.53 5.03
3022 3471 4.760047 CCACAACTCCGGGAGCGG 62.760 72.222 23.84 17.56 32.04 5.52
3023 3472 3.691342 CACAACTCCGGGAGCGGA 61.691 66.667 23.84 4.03 36.51 5.54
3050 3499 4.448363 CGGAGCTATAGTTTAAAACGGC 57.552 45.455 0.84 0.00 36.23 5.68
3051 3500 3.060740 CGGAGCTATAGTTTAAAACGGCG 60.061 47.826 4.80 4.80 36.23 6.46
3053 3502 4.114794 GAGCTATAGTTTAAAACGGCGGA 58.885 43.478 13.24 0.00 36.23 5.54
3068 3517 4.785453 GGAGCTGCACTTCCCCCG 62.785 72.222 0.00 0.00 0.00 5.73
3072 3521 3.710722 CTGCACTTCCCCCGCTCT 61.711 66.667 0.00 0.00 0.00 4.09
3073 3522 3.965539 CTGCACTTCCCCCGCTCTG 62.966 68.421 0.00 0.00 0.00 3.35
3075 3524 4.020617 CACTTCCCCCGCTCTGCA 62.021 66.667 0.00 0.00 0.00 4.41
3077 3526 3.393970 CTTCCCCCGCTCTGCAGA 61.394 66.667 17.19 17.19 0.00 4.26
3078 3527 2.688666 TTCCCCCGCTCTGCAGAT 60.689 61.111 18.63 0.00 0.00 2.90
3079 3528 2.262774 CTTCCCCCGCTCTGCAGATT 62.263 60.000 18.63 0.00 0.00 2.40
3080 3529 2.203126 CCCCCGCTCTGCAGATTC 60.203 66.667 18.63 11.27 0.00 2.52
3081 3530 2.203126 CCCCGCTCTGCAGATTCC 60.203 66.667 18.63 7.93 0.00 3.01
3082 3531 2.586245 CCCGCTCTGCAGATTCCA 59.414 61.111 18.63 0.00 0.00 3.53
3083 3532 1.523258 CCCGCTCTGCAGATTCCAG 60.523 63.158 18.63 6.18 0.00 3.86
3084 3533 1.523258 CCGCTCTGCAGATTCCAGG 60.523 63.158 18.63 12.15 0.00 4.45
3085 3534 1.519246 CGCTCTGCAGATTCCAGGA 59.481 57.895 18.63 0.00 0.00 3.86
3087 3536 0.814812 GCTCTGCAGATTCCAGGAGC 60.815 60.000 18.63 10.76 0.00 4.70
3088 3537 0.530211 CTCTGCAGATTCCAGGAGCG 60.530 60.000 18.63 0.00 0.00 5.03
3089 3538 1.523258 CTGCAGATTCCAGGAGCGG 60.523 63.158 8.42 0.00 0.00 5.52
3090 3539 2.203126 GCAGATTCCAGGAGCGGG 60.203 66.667 0.00 0.00 0.00 6.13
3091 3540 2.203126 CAGATTCCAGGAGCGGGC 60.203 66.667 0.00 0.00 0.00 6.13
3092 3541 3.854669 AGATTCCAGGAGCGGGCG 61.855 66.667 0.00 0.00 0.00 6.13
3093 3542 3.849951 GATTCCAGGAGCGGGCGA 61.850 66.667 0.00 0.00 0.00 5.54
3094 3543 4.162690 ATTCCAGGAGCGGGCGAC 62.163 66.667 0.00 0.00 0.00 5.19
3096 3545 3.949885 TTCCAGGAGCGGGCGACTA 62.950 63.158 0.00 0.00 0.00 2.59
3097 3546 4.208686 CCAGGAGCGGGCGACTAC 62.209 72.222 0.00 0.00 0.00 2.73
3098 3547 4.208686 CAGGAGCGGGCGACTACC 62.209 72.222 0.00 0.00 0.00 3.18
3105 3554 4.180496 GGGCGACTACCGAACAAG 57.820 61.111 0.00 0.00 41.76 3.16
3106 3555 1.447314 GGGCGACTACCGAACAAGG 60.447 63.158 0.00 0.00 41.76 3.61
3107 3556 2.098831 GGCGACTACCGAACAAGGC 61.099 63.158 0.00 0.00 41.76 4.35
3108 3557 2.098831 GCGACTACCGAACAAGGCC 61.099 63.158 0.00 0.00 41.76 5.19
3109 3558 1.590147 CGACTACCGAACAAGGCCT 59.410 57.895 0.00 0.00 41.76 5.19
3110 3559 0.813184 CGACTACCGAACAAGGCCTA 59.187 55.000 5.16 0.00 41.76 3.93
3111 3560 1.203052 CGACTACCGAACAAGGCCTAA 59.797 52.381 5.16 0.00 41.76 2.69
3112 3561 2.734492 CGACTACCGAACAAGGCCTAAG 60.734 54.545 5.16 4.24 41.76 2.18
3113 3562 2.233186 GACTACCGAACAAGGCCTAAGT 59.767 50.000 5.16 5.05 33.69 2.24
3114 3563 3.434309 ACTACCGAACAAGGCCTAAGTA 58.566 45.455 5.16 0.94 33.69 2.24
3115 3564 2.756840 ACCGAACAAGGCCTAAGTAC 57.243 50.000 5.16 0.00 33.69 2.73
3116 3565 2.254508 ACCGAACAAGGCCTAAGTACT 58.745 47.619 5.16 0.00 33.69 2.73
3117 3566 2.233186 ACCGAACAAGGCCTAAGTACTC 59.767 50.000 5.16 2.75 33.69 2.59
3121 3570 2.468915 ACAAGGCCTAAGTACTCCTCC 58.531 52.381 5.16 0.00 0.00 4.30
3208 4857 4.697828 TCTTATTATCCTGTTTTGCACGCA 59.302 37.500 0.00 0.00 0.00 5.24
3210 4859 3.717400 TTATCCTGTTTTGCACGCAAA 57.283 38.095 12.98 12.98 43.23 3.68
3218 4867 1.769733 TTTGCACGCAAAAGATCTGC 58.230 45.000 14.50 0.00 42.16 4.26
3219 4868 0.667453 TTGCACGCAAAAGATCTGCA 59.333 45.000 1.07 0.00 39.91 4.41
3220 4869 0.883153 TGCACGCAAAAGATCTGCAT 59.117 45.000 0.00 0.00 39.91 3.96
3221 4870 1.270274 TGCACGCAAAAGATCTGCATT 59.730 42.857 0.00 0.00 39.91 3.56
3227 4876 4.142816 ACGCAAAAGATCTGCATTGTACTC 60.143 41.667 14.21 1.97 39.91 2.59
3228 4877 4.666237 GCAAAAGATCTGCATTGTACTCC 58.334 43.478 14.21 0.00 39.69 3.85
3232 4881 2.703007 AGATCTGCATTGTACTCCCTCC 59.297 50.000 0.00 0.00 0.00 4.30
3237 4886 0.102481 CATTGTACTCCCTCCGTCCG 59.898 60.000 0.00 0.00 0.00 4.79
3239 4888 0.251297 TTGTACTCCCTCCGTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
3244 4893 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
3245 4894 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
3246 4895 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
3248 4897 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3253 4902 4.390603 TCCGTCCGAAAATACTTGTCATTG 59.609 41.667 0.00 0.00 0.00 2.82
3254 4903 4.390603 CCGTCCGAAAATACTTGTCATTGA 59.609 41.667 0.00 0.00 0.00 2.57
3255 4904 5.106869 CCGTCCGAAAATACTTGTCATTGAA 60.107 40.000 0.00 0.00 0.00 2.69
3256 4905 6.367421 CGTCCGAAAATACTTGTCATTGAAA 58.633 36.000 0.00 0.00 0.00 2.69
3257 4906 7.021196 CGTCCGAAAATACTTGTCATTGAAAT 58.979 34.615 0.00 0.00 0.00 2.17
3258 4907 7.007367 CGTCCGAAAATACTTGTCATTGAAATG 59.993 37.037 0.00 0.00 37.75 2.32
3259 4908 7.273381 GTCCGAAAATACTTGTCATTGAAATGG 59.727 37.037 3.31 0.00 37.03 3.16
3260 4909 7.175816 TCCGAAAATACTTGTCATTGAAATGGA 59.824 33.333 3.31 0.00 37.03 3.41
3261 4910 7.975616 CCGAAAATACTTGTCATTGAAATGGAT 59.024 33.333 3.31 0.00 37.03 3.41
3262 4911 8.800972 CGAAAATACTTGTCATTGAAATGGATG 58.199 33.333 3.31 0.00 37.03 3.51
3263 4912 9.643693 GAAAATACTTGTCATTGAAATGGATGT 57.356 29.630 3.31 2.77 37.03 3.06
3267 4916 7.707624 ACTTGTCATTGAAATGGATGTATGT 57.292 32.000 3.31 0.00 37.03 2.29
3268 4917 8.806429 ACTTGTCATTGAAATGGATGTATGTA 57.194 30.769 3.31 0.00 37.03 2.29
3269 4918 8.896744 ACTTGTCATTGAAATGGATGTATGTAG 58.103 33.333 3.31 0.00 37.03 2.74
3270 4919 9.112725 CTTGTCATTGAAATGGATGTATGTAGA 57.887 33.333 3.31 0.00 37.03 2.59
3271 4920 9.631257 TTGTCATTGAAATGGATGTATGTAGAT 57.369 29.630 3.31 0.00 37.03 1.98
3272 4921 9.059260 TGTCATTGAAATGGATGTATGTAGATG 57.941 33.333 3.31 0.00 37.03 2.90
3273 4922 9.060347 GTCATTGAAATGGATGTATGTAGATGT 57.940 33.333 3.31 0.00 37.03 3.06
3297 4946 8.662141 TGTATTTTAGTTCAAGTAATTCCGAGC 58.338 33.333 0.00 0.00 0.00 5.03
3298 4947 5.773239 TTTAGTTCAAGTAATTCCGAGCG 57.227 39.130 0.00 0.00 0.00 5.03
3299 4948 2.618053 AGTTCAAGTAATTCCGAGCGG 58.382 47.619 1.74 1.74 0.00 5.52
3300 4949 2.232941 AGTTCAAGTAATTCCGAGCGGA 59.767 45.455 7.66 7.66 43.52 5.54
3301 4950 3.118738 AGTTCAAGTAATTCCGAGCGGAT 60.119 43.478 12.93 1.17 44.74 4.18
3302 4951 2.821546 TCAAGTAATTCCGAGCGGATG 58.178 47.619 12.93 7.00 44.74 3.51
3303 4952 1.867233 CAAGTAATTCCGAGCGGATGG 59.133 52.381 12.93 0.00 44.74 3.51
3304 4953 1.410004 AGTAATTCCGAGCGGATGGA 58.590 50.000 12.93 0.00 44.74 3.41
3305 4954 1.341531 AGTAATTCCGAGCGGATGGAG 59.658 52.381 12.93 0.00 44.74 3.86
3348 4998 4.887071 TCAGGCAGTAAAAATAATGGCGAT 59.113 37.500 4.59 0.00 43.80 4.58
3432 5085 6.467677 CGAGGGTTGTGATCTATTATGGATT 58.532 40.000 0.00 0.00 0.00 3.01
3507 5163 7.037438 GGACACAACATAGATTTGCAATGAAT 58.963 34.615 0.00 0.00 0.00 2.57
3592 5248 4.457603 AGCGCATGTTAAAATACAAGACCA 59.542 37.500 11.47 0.00 0.00 4.02
3615 5271 3.120580 GGGAACAAGCATCAAATTTTGCG 60.121 43.478 8.76 0.00 43.61 4.85
3756 5419 2.605818 GGCGTATTTCAGCGTAATGTCA 59.394 45.455 0.00 0.00 0.00 3.58
3819 5482 0.034960 CCGACAGAGTCTCTCCCTCA 60.035 60.000 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.697395 TGTCCTCGTCAAATGAAGAAGAATA 58.303 36.000 0.95 0.00 32.49 1.75
1 2 5.551233 TGTCCTCGTCAAATGAAGAAGAAT 58.449 37.500 0.95 0.00 32.49 2.40
2 3 4.956085 TGTCCTCGTCAAATGAAGAAGAA 58.044 39.130 0.95 0.00 32.49 2.52
3 4 4.600692 TGTCCTCGTCAAATGAAGAAGA 57.399 40.909 0.95 0.00 32.49 2.87
4 5 8.648557 TTATATGTCCTCGTCAAATGAAGAAG 57.351 34.615 0.95 0.00 32.49 2.85
5 6 9.613428 ATTTATATGTCCTCGTCAAATGAAGAA 57.387 29.630 0.95 0.00 32.49 2.52
6 7 9.045223 CATTTATATGTCCTCGTCAAATGAAGA 57.955 33.333 0.00 0.00 35.10 2.87
7 8 9.045223 TCATTTATATGTCCTCGTCAAATGAAG 57.955 33.333 0.00 0.00 37.74 3.02
8 9 8.956533 TCATTTATATGTCCTCGTCAAATGAA 57.043 30.769 0.00 0.00 37.74 2.57
9 10 8.826710 GTTCATTTATATGTCCTCGTCAAATGA 58.173 33.333 0.00 0.00 38.47 2.57
10 11 8.830580 AGTTCATTTATATGTCCTCGTCAAATG 58.169 33.333 0.00 0.00 34.68 2.32
11 12 8.964476 AGTTCATTTATATGTCCTCGTCAAAT 57.036 30.769 0.00 0.00 33.34 2.32
12 13 7.222031 CGAGTTCATTTATATGTCCTCGTCAAA 59.778 37.037 18.88 0.00 41.94 2.69
13 14 6.695713 CGAGTTCATTTATATGTCCTCGTCAA 59.304 38.462 18.88 0.00 41.94 3.18
14 15 6.206498 CGAGTTCATTTATATGTCCTCGTCA 58.794 40.000 18.88 0.00 41.94 4.35
15 16 5.629849 CCGAGTTCATTTATATGTCCTCGTC 59.370 44.000 22.03 4.79 43.39 4.20
16 17 5.529791 CCGAGTTCATTTATATGTCCTCGT 58.470 41.667 22.03 0.00 43.39 4.18
17 18 4.386049 GCCGAGTTCATTTATATGTCCTCG 59.614 45.833 19.56 19.56 43.87 4.63
18 19 4.386049 CGCCGAGTTCATTTATATGTCCTC 59.614 45.833 0.00 0.56 33.34 3.71
19 20 4.202223 ACGCCGAGTTCATTTATATGTCCT 60.202 41.667 0.00 0.00 33.34 3.85
20 21 4.056050 ACGCCGAGTTCATTTATATGTCC 58.944 43.478 0.00 0.00 33.34 4.02
21 22 6.147581 TCTACGCCGAGTTCATTTATATGTC 58.852 40.000 0.00 0.00 33.34 3.06
22 23 6.080648 TCTACGCCGAGTTCATTTATATGT 57.919 37.500 0.00 0.00 33.34 2.29
23 24 6.641314 ACTTCTACGCCGAGTTCATTTATATG 59.359 38.462 0.00 0.00 0.00 1.78
24 25 6.746120 ACTTCTACGCCGAGTTCATTTATAT 58.254 36.000 0.00 0.00 0.00 0.86
25 26 6.140303 ACTTCTACGCCGAGTTCATTTATA 57.860 37.500 0.00 0.00 0.00 0.98
26 27 5.007385 ACTTCTACGCCGAGTTCATTTAT 57.993 39.130 0.00 0.00 0.00 1.40
27 28 4.445452 ACTTCTACGCCGAGTTCATTTA 57.555 40.909 0.00 0.00 0.00 1.40
28 29 3.314541 ACTTCTACGCCGAGTTCATTT 57.685 42.857 0.00 0.00 0.00 2.32
29 30 3.442977 AGTACTTCTACGCCGAGTTCATT 59.557 43.478 0.00 0.00 0.00 2.57
30 31 3.015327 AGTACTTCTACGCCGAGTTCAT 58.985 45.455 0.00 0.00 0.00 2.57
31 32 2.417933 GAGTACTTCTACGCCGAGTTCA 59.582 50.000 0.00 0.00 0.00 3.18
32 33 2.677337 AGAGTACTTCTACGCCGAGTTC 59.323 50.000 0.00 0.00 33.23 3.01
33 34 2.419324 CAGAGTACTTCTACGCCGAGTT 59.581 50.000 0.00 0.00 33.83 3.01
34 35 2.008329 CAGAGTACTTCTACGCCGAGT 58.992 52.381 0.00 0.00 33.83 4.18
35 36 1.268133 GCAGAGTACTTCTACGCCGAG 60.268 57.143 0.00 0.00 33.83 4.63
36 37 0.731417 GCAGAGTACTTCTACGCCGA 59.269 55.000 0.00 0.00 33.83 5.54
37 38 0.450583 TGCAGAGTACTTCTACGCCG 59.549 55.000 0.00 0.00 33.83 6.46
38 39 2.094649 AGTTGCAGAGTACTTCTACGCC 60.095 50.000 0.00 0.00 33.83 5.68
39 40 2.917971 CAGTTGCAGAGTACTTCTACGC 59.082 50.000 0.00 0.00 33.83 4.42
40 41 4.421033 TCAGTTGCAGAGTACTTCTACG 57.579 45.455 0.00 0.00 33.83 3.51
41 42 8.758633 TTTATTCAGTTGCAGAGTACTTCTAC 57.241 34.615 0.00 0.00 33.83 2.59
42 43 9.772973 TTTTTATTCAGTTGCAGAGTACTTCTA 57.227 29.630 0.00 0.00 33.83 2.10
43 44 8.677148 TTTTTATTCAGTTGCAGAGTACTTCT 57.323 30.769 0.00 0.00 36.25 2.85
65 66 7.681543 GCCACATCCAAATTTGTTGACATTTTT 60.682 33.333 16.73 0.00 0.00 1.94
66 67 6.238703 GCCACATCCAAATTTGTTGACATTTT 60.239 34.615 16.73 0.00 0.00 1.82
67 68 5.239087 GCCACATCCAAATTTGTTGACATTT 59.761 36.000 16.73 0.00 0.00 2.32
68 69 4.756135 GCCACATCCAAATTTGTTGACATT 59.244 37.500 16.73 0.00 0.00 2.71
69 70 4.202336 TGCCACATCCAAATTTGTTGACAT 60.202 37.500 16.73 0.00 0.00 3.06
70 71 3.133542 TGCCACATCCAAATTTGTTGACA 59.866 39.130 16.73 11.38 0.00 3.58
71 72 3.726607 TGCCACATCCAAATTTGTTGAC 58.273 40.909 16.73 9.46 0.00 3.18
72 73 4.620589 ATGCCACATCCAAATTTGTTGA 57.379 36.364 16.73 8.34 0.00 3.18
73 74 5.453648 CAAATGCCACATCCAAATTTGTTG 58.546 37.500 16.73 15.07 34.85 3.33
74 75 4.519730 CCAAATGCCACATCCAAATTTGTT 59.480 37.500 16.73 1.46 36.80 2.83
75 76 4.073549 CCAAATGCCACATCCAAATTTGT 58.926 39.130 16.73 0.00 36.80 2.83
76 77 3.119779 GCCAAATGCCACATCCAAATTTG 60.120 43.478 11.40 11.40 37.76 2.32
77 78 3.083293 GCCAAATGCCACATCCAAATTT 58.917 40.909 0.00 0.00 0.00 1.82
78 79 2.713877 GCCAAATGCCACATCCAAATT 58.286 42.857 0.00 0.00 0.00 1.82
79 80 2.406596 GCCAAATGCCACATCCAAAT 57.593 45.000 0.00 0.00 0.00 2.32
80 81 3.931768 GCCAAATGCCACATCCAAA 57.068 47.368 0.00 0.00 0.00 3.28
90 91 0.031994 ACAAGTGTTCGGCCAAATGC 59.968 50.000 2.24 0.00 40.16 3.56
91 92 1.336440 TGACAAGTGTTCGGCCAAATG 59.664 47.619 2.24 0.00 0.00 2.32
92 93 1.608590 CTGACAAGTGTTCGGCCAAAT 59.391 47.619 2.24 0.00 0.00 2.32
93 94 1.021202 CTGACAAGTGTTCGGCCAAA 58.979 50.000 2.24 0.00 0.00 3.28
94 95 0.817634 CCTGACAAGTGTTCGGCCAA 60.818 55.000 2.24 0.00 0.00 4.52
95 96 1.227823 CCTGACAAGTGTTCGGCCA 60.228 57.895 2.24 0.00 0.00 5.36
96 97 1.227853 ACCTGACAAGTGTTCGGCC 60.228 57.895 0.00 0.00 0.00 6.13
97 98 0.814010 ACACCTGACAAGTGTTCGGC 60.814 55.000 3.91 0.00 46.07 5.54
98 99 0.937304 CACACCTGACAAGTGTTCGG 59.063 55.000 7.11 0.00 46.07 4.30
99 100 0.937304 CCACACCTGACAAGTGTTCG 59.063 55.000 7.11 0.00 46.07 3.95
100 101 1.670811 CACCACACCTGACAAGTGTTC 59.329 52.381 7.11 0.00 46.07 3.18
101 102 1.004277 ACACCACACCTGACAAGTGTT 59.996 47.619 7.11 0.00 46.07 3.32
103 104 1.299541 GACACCACACCTGACAAGTG 58.700 55.000 2.53 2.53 41.15 3.16
104 105 0.180406 GGACACCACACCTGACAAGT 59.820 55.000 0.00 0.00 0.00 3.16
105 106 0.180171 TGGACACCACACCTGACAAG 59.820 55.000 0.00 0.00 0.00 3.16
106 107 2.302019 TGGACACCACACCTGACAA 58.698 52.632 0.00 0.00 0.00 3.18
107 108 4.058434 TGGACACCACACCTGACA 57.942 55.556 0.00 0.00 0.00 3.58
118 119 0.537143 TTGTCAGCCATGGTGGACAC 60.537 55.000 28.89 14.38 40.96 3.67
119 120 0.405198 ATTGTCAGCCATGGTGGACA 59.595 50.000 26.69 26.69 40.96 4.02
120 121 0.813184 CATTGTCAGCCATGGTGGAC 59.187 55.000 23.22 23.22 40.96 4.02
121 122 0.405198 ACATTGTCAGCCATGGTGGA 59.595 50.000 14.67 8.53 40.96 4.02
122 123 0.528924 CACATTGTCAGCCATGGTGG 59.471 55.000 14.67 6.00 41.55 4.61
123 124 0.108992 GCACATTGTCAGCCATGGTG 60.109 55.000 14.67 10.59 33.15 4.17
124 125 0.540133 TGCACATTGTCAGCCATGGT 60.540 50.000 14.67 0.00 0.00 3.55
125 126 0.172578 CTGCACATTGTCAGCCATGG 59.827 55.000 7.63 7.63 0.00 3.66
126 127 0.172578 CCTGCACATTGTCAGCCATG 59.827 55.000 9.44 0.00 0.00 3.66
127 128 0.968901 CCCTGCACATTGTCAGCCAT 60.969 55.000 9.44 0.00 0.00 4.40
128 129 1.604308 CCCTGCACATTGTCAGCCA 60.604 57.895 9.44 0.00 0.00 4.75
129 130 2.345760 CCCCTGCACATTGTCAGCC 61.346 63.158 9.44 0.00 0.00 4.85
130 131 2.998279 GCCCCTGCACATTGTCAGC 61.998 63.158 9.44 2.44 37.47 4.26
131 132 2.693762 CGCCCCTGCACATTGTCAG 61.694 63.158 8.44 8.44 37.32 3.51
132 133 2.672651 CGCCCCTGCACATTGTCA 60.673 61.111 0.00 0.00 37.32 3.58
133 134 3.443045 CCGCCCCTGCACATTGTC 61.443 66.667 0.00 0.00 37.32 3.18
134 135 3.925630 CTCCGCCCCTGCACATTGT 62.926 63.158 0.00 0.00 37.32 2.71
135 136 3.136123 CTCCGCCCCTGCACATTG 61.136 66.667 0.00 0.00 37.32 2.82
136 137 4.431131 CCTCCGCCCCTGCACATT 62.431 66.667 0.00 0.00 37.32 2.71
142 143 2.884179 TTAGGTACCCTCCGCCCCTG 62.884 65.000 8.74 0.00 34.61 4.45
143 144 2.600735 CTTAGGTACCCTCCGCCCCT 62.601 65.000 8.74 0.00 34.61 4.79
144 145 2.041612 TTAGGTACCCTCCGCCCC 60.042 66.667 8.74 0.00 34.61 5.80
145 146 2.804912 GCTTAGGTACCCTCCGCCC 61.805 68.421 8.74 0.00 34.61 6.13
146 147 1.408453 ATGCTTAGGTACCCTCCGCC 61.408 60.000 8.74 0.00 34.61 6.13
147 148 0.033642 GATGCTTAGGTACCCTCCGC 59.966 60.000 8.74 7.19 34.61 5.54
148 149 0.314302 CGATGCTTAGGTACCCTCCG 59.686 60.000 8.74 0.00 34.61 4.63
149 150 1.340568 GACGATGCTTAGGTACCCTCC 59.659 57.143 8.74 0.00 34.61 4.30
150 151 1.001597 CGACGATGCTTAGGTACCCTC 60.002 57.143 8.74 0.00 34.61 4.30
151 152 1.030457 CGACGATGCTTAGGTACCCT 58.970 55.000 8.74 0.00 37.71 4.34
152 153 0.031721 CCGACGATGCTTAGGTACCC 59.968 60.000 8.74 0.00 0.00 3.69
153 154 1.027357 TCCGACGATGCTTAGGTACC 58.973 55.000 2.73 2.73 0.00 3.34
154 155 1.674962 AGTCCGACGATGCTTAGGTAC 59.325 52.381 0.00 0.00 0.00 3.34
155 156 2.048444 AGTCCGACGATGCTTAGGTA 57.952 50.000 0.00 0.00 0.00 3.08
156 157 1.948145 CTAGTCCGACGATGCTTAGGT 59.052 52.381 0.00 0.00 0.00 3.08
157 158 1.267261 CCTAGTCCGACGATGCTTAGG 59.733 57.143 0.00 0.00 0.00 2.69
158 159 1.267261 CCCTAGTCCGACGATGCTTAG 59.733 57.143 0.00 0.00 0.00 2.18
159 160 1.315690 CCCTAGTCCGACGATGCTTA 58.684 55.000 0.00 0.00 0.00 3.09
160 161 1.392710 CCCCTAGTCCGACGATGCTT 61.393 60.000 0.00 0.00 0.00 3.91
161 162 1.828660 CCCCTAGTCCGACGATGCT 60.829 63.158 0.00 0.00 0.00 3.79
162 163 2.728817 CCCCTAGTCCGACGATGC 59.271 66.667 0.00 0.00 0.00 3.91
163 164 1.828660 AGCCCCTAGTCCGACGATG 60.829 63.158 0.00 0.00 0.00 3.84
164 165 1.828660 CAGCCCCTAGTCCGACGAT 60.829 63.158 0.00 0.00 0.00 3.73
165 166 2.439701 CAGCCCCTAGTCCGACGA 60.440 66.667 0.00 0.00 0.00 4.20
166 167 1.601419 TTTCAGCCCCTAGTCCGACG 61.601 60.000 0.00 0.00 0.00 5.12
167 168 0.175989 CTTTCAGCCCCTAGTCCGAC 59.824 60.000 0.00 0.00 0.00 4.79
168 169 0.976073 CCTTTCAGCCCCTAGTCCGA 60.976 60.000 0.00 0.00 0.00 4.55
169 170 0.976073 TCCTTTCAGCCCCTAGTCCG 60.976 60.000 0.00 0.00 0.00 4.79
170 171 0.833949 CTCCTTTCAGCCCCTAGTCC 59.166 60.000 0.00 0.00 0.00 3.85
171 172 0.833949 CCTCCTTTCAGCCCCTAGTC 59.166 60.000 0.00 0.00 0.00 2.59
172 173 1.275421 GCCTCCTTTCAGCCCCTAGT 61.275 60.000 0.00 0.00 0.00 2.57
173 174 1.529309 GCCTCCTTTCAGCCCCTAG 59.471 63.158 0.00 0.00 0.00 3.02
174 175 2.367202 CGCCTCCTTTCAGCCCCTA 61.367 63.158 0.00 0.00 0.00 3.53
175 176 3.721706 CGCCTCCTTTCAGCCCCT 61.722 66.667 0.00 0.00 0.00 4.79
176 177 2.595009 CTACGCCTCCTTTCAGCCCC 62.595 65.000 0.00 0.00 0.00 5.80
177 178 1.153349 CTACGCCTCCTTTCAGCCC 60.153 63.158 0.00 0.00 0.00 5.19
178 179 1.153349 CCTACGCCTCCTTTCAGCC 60.153 63.158 0.00 0.00 0.00 4.85
179 180 1.815840 GCCTACGCCTCCTTTCAGC 60.816 63.158 0.00 0.00 0.00 4.26
180 181 0.036388 TTGCCTACGCCTCCTTTCAG 60.036 55.000 0.00 0.00 0.00 3.02
181 182 0.321298 GTTGCCTACGCCTCCTTTCA 60.321 55.000 0.00 0.00 0.00 2.69
182 183 0.036294 AGTTGCCTACGCCTCCTTTC 60.036 55.000 0.00 0.00 0.00 2.62
183 184 0.036294 GAGTTGCCTACGCCTCCTTT 60.036 55.000 0.00 0.00 0.00 3.11
184 185 1.597461 GAGTTGCCTACGCCTCCTT 59.403 57.895 0.00 0.00 0.00 3.36
185 186 2.359967 GGAGTTGCCTACGCCTCCT 61.360 63.158 0.00 0.00 42.85 3.69
186 187 2.187163 GGAGTTGCCTACGCCTCC 59.813 66.667 2.25 0.00 42.85 4.30
187 188 1.153549 CTGGAGTTGCCTACGCCTC 60.154 63.158 9.60 0.00 46.01 4.70
188 189 2.660064 CCTGGAGTTGCCTACGCCT 61.660 63.158 9.60 0.00 46.01 5.52
189 190 2.125106 CCTGGAGTTGCCTACGCC 60.125 66.667 2.47 2.47 46.03 5.68
190 191 1.003718 AACCTGGAGTTGCCTACGC 60.004 57.895 0.00 0.00 37.29 4.42
215 216 4.162690 ACCTTCGCCGCTCCATCC 62.163 66.667 0.00 0.00 0.00 3.51
216 217 2.586357 GACCTTCGCCGCTCCATC 60.586 66.667 0.00 0.00 0.00 3.51
217 218 4.162690 GGACCTTCGCCGCTCCAT 62.163 66.667 0.00 0.00 0.00 3.41
219 220 4.821589 CTGGACCTTCGCCGCTCC 62.822 72.222 0.00 0.00 0.00 4.70
223 224 3.423154 GTTGCTGGACCTTCGCCG 61.423 66.667 0.00 0.00 0.00 6.46
224 225 3.423154 CGTTGCTGGACCTTCGCC 61.423 66.667 0.00 0.00 0.00 5.54
225 226 4.090057 GCGTTGCTGGACCTTCGC 62.090 66.667 0.00 0.00 37.17 4.70
226 227 3.423154 GGCGTTGCTGGACCTTCG 61.423 66.667 0.00 0.00 0.00 3.79
227 228 2.032681 AGGCGTTGCTGGACCTTC 59.967 61.111 0.00 0.00 0.00 3.46
228 229 2.281761 CAGGCGTTGCTGGACCTT 60.282 61.111 0.00 0.00 0.00 3.50
229 230 4.335647 CCAGGCGTTGCTGGACCT 62.336 66.667 0.69 0.00 43.08 3.85
231 232 4.643387 ACCCAGGCGTTGCTGGAC 62.643 66.667 8.19 0.00 43.08 4.02
232 233 4.641645 CACCCAGGCGTTGCTGGA 62.642 66.667 8.19 0.00 43.08 3.86
234 235 3.545124 TACCACCCAGGCGTTGCTG 62.545 63.158 0.00 0.00 43.14 4.41
235 236 3.246112 TACCACCCAGGCGTTGCT 61.246 61.111 0.00 0.00 43.14 3.91
236 237 2.746277 CTACCACCCAGGCGTTGC 60.746 66.667 0.00 0.00 43.14 4.17
237 238 1.079127 CTCTACCACCCAGGCGTTG 60.079 63.158 0.00 0.00 43.14 4.10
238 239 1.535687 ACTCTACCACCCAGGCGTT 60.536 57.895 0.00 0.00 43.14 4.84
239 240 2.119832 ACTCTACCACCCAGGCGT 59.880 61.111 0.00 0.00 43.14 5.68
240 241 2.579201 CACTCTACCACCCAGGCG 59.421 66.667 0.00 0.00 43.14 5.52
241 242 2.670148 CCCACTCTACCACCCAGGC 61.670 68.421 0.00 0.00 43.14 4.85
242 243 1.229529 ACCCACTCTACCACCCAGG 60.230 63.158 0.00 0.00 45.67 4.45
243 244 1.553690 CCACCCACTCTACCACCCAG 61.554 65.000 0.00 0.00 0.00 4.45
244 245 1.537889 CCACCCACTCTACCACCCA 60.538 63.158 0.00 0.00 0.00 4.51
245 246 0.252375 TACCACCCACTCTACCACCC 60.252 60.000 0.00 0.00 0.00 4.61
246 247 0.900421 GTACCACCCACTCTACCACC 59.100 60.000 0.00 0.00 0.00 4.61
247 248 1.549170 CTGTACCACCCACTCTACCAC 59.451 57.143 0.00 0.00 0.00 4.16
248 249 1.933021 CTGTACCACCCACTCTACCA 58.067 55.000 0.00 0.00 0.00 3.25
249 250 0.535797 GCTGTACCACCCACTCTACC 59.464 60.000 0.00 0.00 0.00 3.18
250 251 0.172803 CGCTGTACCACCCACTCTAC 59.827 60.000 0.00 0.00 0.00 2.59
251 252 0.968901 CCGCTGTACCACCCACTCTA 60.969 60.000 0.00 0.00 0.00 2.43
252 253 2.283529 CCGCTGTACCACCCACTCT 61.284 63.158 0.00 0.00 0.00 3.24
253 254 2.264794 CCGCTGTACCACCCACTC 59.735 66.667 0.00 0.00 0.00 3.51
254 255 4.016706 GCCGCTGTACCACCCACT 62.017 66.667 0.00 0.00 0.00 4.00
259 260 4.409218 TCGTCGCCGCTGTACCAC 62.409 66.667 0.00 0.00 0.00 4.16
260 261 4.409218 GTCGTCGCCGCTGTACCA 62.409 66.667 0.00 0.00 0.00 3.25
261 262 3.695022 ATGTCGTCGCCGCTGTACC 62.695 63.158 0.00 0.00 0.00 3.34
262 263 1.740043 GAATGTCGTCGCCGCTGTAC 61.740 60.000 0.00 0.00 0.00 2.90
263 264 1.515519 GAATGTCGTCGCCGCTGTA 60.516 57.895 0.00 0.00 0.00 2.74
264 265 2.765250 AAGAATGTCGTCGCCGCTGT 62.765 55.000 0.00 0.00 0.00 4.40
265 266 2.094659 AAGAATGTCGTCGCCGCTG 61.095 57.895 0.00 0.00 0.00 5.18
266 267 2.094659 CAAGAATGTCGTCGCCGCT 61.095 57.895 0.00 0.00 0.00 5.52
267 268 2.395690 CAAGAATGTCGTCGCCGC 59.604 61.111 0.00 0.00 0.00 6.53
268 269 1.445410 TCCAAGAATGTCGTCGCCG 60.445 57.895 0.00 0.00 0.00 6.46
269 270 0.389948 AGTCCAAGAATGTCGTCGCC 60.390 55.000 0.00 0.00 0.00 5.54
270 271 1.918609 GTAGTCCAAGAATGTCGTCGC 59.081 52.381 0.00 0.00 0.00 5.19
271 272 2.915463 GTGTAGTCCAAGAATGTCGTCG 59.085 50.000 0.00 0.00 0.00 5.12
272 273 3.909430 TGTGTAGTCCAAGAATGTCGTC 58.091 45.455 0.00 0.00 0.00 4.20
273 274 3.572682 TCTGTGTAGTCCAAGAATGTCGT 59.427 43.478 0.00 0.00 0.00 4.34
274 275 4.174411 TCTGTGTAGTCCAAGAATGTCG 57.826 45.455 0.00 0.00 0.00 4.35
275 276 6.631016 TGTATCTGTGTAGTCCAAGAATGTC 58.369 40.000 0.00 0.00 0.00 3.06
276 277 6.437477 TCTGTATCTGTGTAGTCCAAGAATGT 59.563 38.462 0.00 0.00 0.00 2.71
277 278 6.867550 TCTGTATCTGTGTAGTCCAAGAATG 58.132 40.000 0.00 0.00 0.00 2.67
278 279 6.097554 CCTCTGTATCTGTGTAGTCCAAGAAT 59.902 42.308 0.00 0.00 0.00 2.40
279 280 5.419155 CCTCTGTATCTGTGTAGTCCAAGAA 59.581 44.000 0.00 0.00 0.00 2.52
280 281 4.950475 CCTCTGTATCTGTGTAGTCCAAGA 59.050 45.833 0.00 0.00 0.00 3.02
281 282 4.950475 TCCTCTGTATCTGTGTAGTCCAAG 59.050 45.833 0.00 0.00 0.00 3.61
282 283 4.930696 TCCTCTGTATCTGTGTAGTCCAA 58.069 43.478 0.00 0.00 0.00 3.53
283 284 4.527944 CTCCTCTGTATCTGTGTAGTCCA 58.472 47.826 0.00 0.00 0.00 4.02
284 285 3.886505 CCTCCTCTGTATCTGTGTAGTCC 59.113 52.174 0.00 0.00 0.00 3.85
285 286 3.886505 CCCTCCTCTGTATCTGTGTAGTC 59.113 52.174 0.00 0.00 0.00 2.59
286 287 3.373220 CCCCTCCTCTGTATCTGTGTAGT 60.373 52.174 0.00 0.00 0.00 2.73
287 288 3.226777 CCCCTCCTCTGTATCTGTGTAG 58.773 54.545 0.00 0.00 0.00 2.74
288 289 2.091278 CCCCCTCCTCTGTATCTGTGTA 60.091 54.545 0.00 0.00 0.00 2.90
289 290 1.343478 CCCCCTCCTCTGTATCTGTGT 60.343 57.143 0.00 0.00 0.00 3.72
290 291 1.418334 CCCCCTCCTCTGTATCTGTG 58.582 60.000 0.00 0.00 0.00 3.66
291 292 3.957188 CCCCCTCCTCTGTATCTGT 57.043 57.895 0.00 0.00 0.00 3.41
308 309 4.722700 TTGCTTCGCTCTGCCCCC 62.723 66.667 0.00 0.00 0.00 5.40
309 310 3.130160 CTTGCTTCGCTCTGCCCC 61.130 66.667 0.00 0.00 0.00 5.80
310 311 3.130160 CCTTGCTTCGCTCTGCCC 61.130 66.667 0.00 0.00 0.00 5.36
311 312 3.808656 GCCTTGCTTCGCTCTGCC 61.809 66.667 0.00 0.00 0.00 4.85
312 313 2.745492 AGCCTTGCTTCGCTCTGC 60.745 61.111 0.00 0.00 33.89 4.26
313 314 3.483959 GAGCCTTGCTTCGCTCTG 58.516 61.111 10.89 0.00 46.48 3.35
316 317 1.118838 ATCTAGAGCCTTGCTTCGCT 58.881 50.000 0.00 0.00 39.88 4.93
317 318 1.216122 CATCTAGAGCCTTGCTTCGC 58.784 55.000 0.00 0.00 39.88 4.70
318 319 1.539929 CCCATCTAGAGCCTTGCTTCG 60.540 57.143 0.00 0.00 39.88 3.79
319 320 1.488393 ACCCATCTAGAGCCTTGCTTC 59.512 52.381 0.00 0.00 39.88 3.86
320 321 1.589414 ACCCATCTAGAGCCTTGCTT 58.411 50.000 0.00 0.00 39.88 3.91
321 322 1.589414 AACCCATCTAGAGCCTTGCT 58.411 50.000 0.00 0.00 43.88 3.91
322 323 2.426842 AAACCCATCTAGAGCCTTGC 57.573 50.000 0.00 0.00 0.00 4.01
342 343 2.761208 CACCCACAAGTACCCACAAAAA 59.239 45.455 0.00 0.00 0.00 1.94
343 344 2.291670 ACACCCACAAGTACCCACAAAA 60.292 45.455 0.00 0.00 0.00 2.44
344 345 1.285373 ACACCCACAAGTACCCACAAA 59.715 47.619 0.00 0.00 0.00 2.83
345 346 0.920438 ACACCCACAAGTACCCACAA 59.080 50.000 0.00 0.00 0.00 3.33
346 347 0.470766 GACACCCACAAGTACCCACA 59.529 55.000 0.00 0.00 0.00 4.17
347 348 0.601841 CGACACCCACAAGTACCCAC 60.602 60.000 0.00 0.00 0.00 4.61
348 349 1.749665 CGACACCCACAAGTACCCA 59.250 57.895 0.00 0.00 0.00 4.51
349 350 1.004200 CCGACACCCACAAGTACCC 60.004 63.158 0.00 0.00 0.00 3.69
350 351 0.320160 GTCCGACACCCACAAGTACC 60.320 60.000 0.00 0.00 0.00 3.34
351 352 0.677842 AGTCCGACACCCACAAGTAC 59.322 55.000 0.40 0.00 0.00 2.73
352 353 0.963962 GAGTCCGACACCCACAAGTA 59.036 55.000 0.40 0.00 0.00 2.24
353 354 1.746517 GAGTCCGACACCCACAAGT 59.253 57.895 0.40 0.00 0.00 3.16
354 355 1.004918 GGAGTCCGACACCCACAAG 60.005 63.158 3.71 0.00 0.00 3.16
355 356 0.178955 TAGGAGTCCGACACCCACAA 60.179 55.000 11.04 0.00 28.26 3.33
356 357 0.040646 ATAGGAGTCCGACACCCACA 59.959 55.000 11.04 0.00 28.26 4.17
357 358 0.460311 CATAGGAGTCCGACACCCAC 59.540 60.000 11.04 0.00 28.26 4.61
358 359 0.040646 ACATAGGAGTCCGACACCCA 59.959 55.000 11.04 0.00 28.26 4.51
359 360 0.460311 CACATAGGAGTCCGACACCC 59.540 60.000 11.04 6.62 28.26 4.61
360 361 0.460311 CCACATAGGAGTCCGACACC 59.540 60.000 6.89 6.89 41.22 4.16
361 362 0.179108 GCCACATAGGAGTCCGACAC 60.179 60.000 2.76 0.00 41.22 3.67
362 363 1.663379 CGCCACATAGGAGTCCGACA 61.663 60.000 2.76 0.00 41.22 4.35
363 364 1.065928 CGCCACATAGGAGTCCGAC 59.934 63.158 2.76 0.00 41.22 4.79
364 365 2.125326 CCGCCACATAGGAGTCCGA 61.125 63.158 2.76 0.00 41.22 4.55
365 366 1.956629 AACCGCCACATAGGAGTCCG 61.957 60.000 2.76 0.00 41.22 4.79
366 367 0.462047 CAACCGCCACATAGGAGTCC 60.462 60.000 0.00 0.00 41.22 3.85
367 368 0.249398 ACAACCGCCACATAGGAGTC 59.751 55.000 0.00 0.00 41.22 3.36
368 369 0.249398 GACAACCGCCACATAGGAGT 59.751 55.000 0.00 0.00 41.22 3.85
369 370 0.462047 GGACAACCGCCACATAGGAG 60.462 60.000 0.00 0.00 41.22 3.69
370 371 1.600107 GGACAACCGCCACATAGGA 59.400 57.895 0.00 0.00 41.22 2.94
371 372 4.218722 GGACAACCGCCACATAGG 57.781 61.111 0.00 0.00 41.84 2.57
381 382 2.265904 GGGAGGTTTGCGGACAACC 61.266 63.158 11.26 11.26 34.87 3.77
382 383 1.515521 CTGGGAGGTTTGCGGACAAC 61.516 60.000 0.00 0.00 34.87 3.32
383 384 1.228124 CTGGGAGGTTTGCGGACAA 60.228 57.895 0.00 0.00 0.00 3.18
384 385 1.990160 AACTGGGAGGTTTGCGGACA 61.990 55.000 0.00 0.00 0.00 4.02
385 386 0.822121 AAACTGGGAGGTTTGCGGAC 60.822 55.000 0.00 0.00 37.91 4.79
386 387 0.106419 AAAACTGGGAGGTTTGCGGA 60.106 50.000 0.00 0.00 33.11 5.54
387 388 0.031994 CAAAACTGGGAGGTTTGCGG 59.968 55.000 1.34 0.00 44.72 5.69
388 389 3.568093 CAAAACTGGGAGGTTTGCG 57.432 52.632 1.34 0.00 44.72 4.85
391 392 2.039418 GGAAGCAAAACTGGGAGGTTT 58.961 47.619 0.00 0.00 35.04 3.27
392 393 1.704641 GGAAGCAAAACTGGGAGGTT 58.295 50.000 0.00 0.00 0.00 3.50
393 394 0.537371 CGGAAGCAAAACTGGGAGGT 60.537 55.000 0.00 0.00 0.00 3.85
394 395 1.244019 CCGGAAGCAAAACTGGGAGG 61.244 60.000 0.00 0.00 0.00 4.30
395 396 0.537371 ACCGGAAGCAAAACTGGGAG 60.537 55.000 9.46 0.00 36.91 4.30
396 397 0.106419 AACCGGAAGCAAAACTGGGA 60.106 50.000 9.46 0.00 36.91 4.37
397 398 0.750249 AAACCGGAAGCAAAACTGGG 59.250 50.000 9.46 0.00 36.91 4.45
398 399 1.136110 ACAAACCGGAAGCAAAACTGG 59.864 47.619 9.46 0.00 38.40 4.00
399 400 2.577449 ACAAACCGGAAGCAAAACTG 57.423 45.000 9.46 0.00 0.00 3.16
400 401 2.621526 CCTACAAACCGGAAGCAAAACT 59.378 45.455 9.46 0.00 0.00 2.66
401 402 2.619646 TCCTACAAACCGGAAGCAAAAC 59.380 45.455 9.46 0.00 0.00 2.43
402 403 2.933573 TCCTACAAACCGGAAGCAAAA 58.066 42.857 9.46 0.00 0.00 2.44
403 404 2.642154 TCCTACAAACCGGAAGCAAA 57.358 45.000 9.46 0.00 0.00 3.68
404 405 2.642154 TTCCTACAAACCGGAAGCAA 57.358 45.000 9.46 0.00 34.52 3.91
405 406 2.871096 ATTCCTACAAACCGGAAGCA 57.129 45.000 9.46 0.00 42.15 3.91
406 407 4.939439 TCTAAATTCCTACAAACCGGAAGC 59.061 41.667 9.46 0.00 42.15 3.86
407 408 5.063060 CGTCTAAATTCCTACAAACCGGAAG 59.937 44.000 9.46 0.00 42.15 3.46
408 409 4.931002 CGTCTAAATTCCTACAAACCGGAA 59.069 41.667 9.46 0.00 42.96 4.30
409 410 4.021192 ACGTCTAAATTCCTACAAACCGGA 60.021 41.667 9.46 0.00 0.00 5.14
410 411 4.248058 ACGTCTAAATTCCTACAAACCGG 58.752 43.478 0.00 0.00 0.00 5.28
411 412 7.276218 TCAATACGTCTAAATTCCTACAAACCG 59.724 37.037 0.00 0.00 0.00 4.44
412 413 8.385858 GTCAATACGTCTAAATTCCTACAAACC 58.614 37.037 0.00 0.00 0.00 3.27
413 414 8.385858 GGTCAATACGTCTAAATTCCTACAAAC 58.614 37.037 0.00 0.00 0.00 2.93
414 415 7.276218 CGGTCAATACGTCTAAATTCCTACAAA 59.724 37.037 0.00 0.00 0.00 2.83
415 416 6.753279 CGGTCAATACGTCTAAATTCCTACAA 59.247 38.462 0.00 0.00 0.00 2.41
416 417 6.267817 CGGTCAATACGTCTAAATTCCTACA 58.732 40.000 0.00 0.00 0.00 2.74
417 418 5.689068 CCGGTCAATACGTCTAAATTCCTAC 59.311 44.000 0.00 0.00 0.00 3.18
418 419 5.360714 ACCGGTCAATACGTCTAAATTCCTA 59.639 40.000 0.00 0.00 0.00 2.94
419 420 4.161001 ACCGGTCAATACGTCTAAATTCCT 59.839 41.667 0.00 0.00 0.00 3.36
420 421 4.436332 ACCGGTCAATACGTCTAAATTCC 58.564 43.478 0.00 0.00 0.00 3.01
421 422 4.505556 GGACCGGTCAATACGTCTAAATTC 59.494 45.833 34.40 8.67 0.00 2.17
422 423 4.436332 GGACCGGTCAATACGTCTAAATT 58.564 43.478 34.40 0.00 0.00 1.82
423 424 3.489738 CGGACCGGTCAATACGTCTAAAT 60.490 47.826 34.40 0.00 0.00 1.40
424 425 2.159393 CGGACCGGTCAATACGTCTAAA 60.159 50.000 34.40 0.00 0.00 1.85
425 426 1.401552 CGGACCGGTCAATACGTCTAA 59.598 52.381 34.40 0.00 0.00 2.10
426 427 1.016627 CGGACCGGTCAATACGTCTA 58.983 55.000 34.40 0.00 0.00 2.59
427 428 1.805254 CGGACCGGTCAATACGTCT 59.195 57.895 34.40 0.00 0.00 4.18
428 429 1.875364 GCGGACCGGTCAATACGTC 60.875 63.158 34.40 19.44 0.00 4.34
429 430 2.182537 GCGGACCGGTCAATACGT 59.817 61.111 34.40 0.00 0.00 3.57
430 431 2.952783 CGCGGACCGGTCAATACG 60.953 66.667 34.40 27.60 0.00 3.06
439 440 2.202650 ATTAACGTCCGCGGACCG 60.203 61.111 43.58 37.84 41.76 4.79
440 441 2.805807 GCATTAACGTCCGCGGACC 61.806 63.158 43.58 29.11 41.76 4.46
441 442 1.426041 ATGCATTAACGTCCGCGGAC 61.426 55.000 41.75 41.75 43.45 4.79
442 443 1.153529 ATGCATTAACGTCCGCGGA 60.154 52.632 27.28 27.28 43.45 5.54
443 444 1.011242 CATGCATTAACGTCCGCGG 60.011 57.895 22.12 22.12 43.45 6.46
444 445 1.011242 CCATGCATTAACGTCCGCG 60.011 57.895 0.00 0.00 44.93 6.46
445 446 1.298339 GCCATGCATTAACGTCCGC 60.298 57.895 0.00 0.00 0.00 5.54
446 447 1.011242 CGCCATGCATTAACGTCCG 60.011 57.895 0.00 0.00 0.00 4.79
447 448 0.450184 AACGCCATGCATTAACGTCC 59.550 50.000 16.14 0.00 35.64 4.79
448 449 1.534028 CAACGCCATGCATTAACGTC 58.466 50.000 16.14 0.00 35.64 4.34
449 450 0.170116 CCAACGCCATGCATTAACGT 59.830 50.000 11.48 11.48 38.88 3.99
450 451 0.449786 TCCAACGCCATGCATTAACG 59.550 50.000 0.00 3.61 0.00 3.18
451 452 2.098934 TCATCCAACGCCATGCATTAAC 59.901 45.455 0.00 0.00 0.00 2.01
452 453 2.098934 GTCATCCAACGCCATGCATTAA 59.901 45.455 0.00 0.00 0.00 1.40
453 454 1.675483 GTCATCCAACGCCATGCATTA 59.325 47.619 0.00 0.00 0.00 1.90
454 455 0.457035 GTCATCCAACGCCATGCATT 59.543 50.000 0.00 0.00 0.00 3.56
455 456 0.680601 TGTCATCCAACGCCATGCAT 60.681 50.000 0.00 0.00 0.00 3.96
456 457 1.303155 TGTCATCCAACGCCATGCA 60.303 52.632 0.00 0.00 0.00 3.96
457 458 1.137404 GTGTCATCCAACGCCATGC 59.863 57.895 0.00 0.00 0.00 4.06
458 459 0.880441 TTGTGTCATCCAACGCCATG 59.120 50.000 0.00 0.00 0.00 3.66
459 460 1.541147 CTTTGTGTCATCCAACGCCAT 59.459 47.619 0.00 0.00 0.00 4.40
460 461 0.950836 CTTTGTGTCATCCAACGCCA 59.049 50.000 0.00 0.00 0.00 5.69
461 462 0.951558 ACTTTGTGTCATCCAACGCC 59.048 50.000 0.00 0.00 0.00 5.68
462 463 1.333619 ACACTTTGTGTCATCCAACGC 59.666 47.619 0.00 0.00 43.92 4.84
463 464 3.691049 AACACTTTGTGTCATCCAACG 57.309 42.857 3.73 0.00 46.79 4.10
464 465 4.111916 CCAAACACTTTGTGTCATCCAAC 58.888 43.478 3.73 0.00 46.79 3.77
465 466 4.019858 TCCAAACACTTTGTGTCATCCAA 58.980 39.130 3.73 0.00 46.79 3.53
466 467 3.380004 GTCCAAACACTTTGTGTCATCCA 59.620 43.478 3.73 0.00 46.79 3.41
467 468 3.243401 GGTCCAAACACTTTGTGTCATCC 60.243 47.826 3.73 0.77 46.79 3.51
468 469 3.548014 CGGTCCAAACACTTTGTGTCATC 60.548 47.826 3.73 0.00 46.79 2.92
469 470 2.357637 CGGTCCAAACACTTTGTGTCAT 59.642 45.455 3.73 0.00 46.79 3.06
470 471 1.740585 CGGTCCAAACACTTTGTGTCA 59.259 47.619 3.73 0.00 46.79 3.58
471 472 1.533129 GCGGTCCAAACACTTTGTGTC 60.533 52.381 3.73 0.00 46.79 3.67
473 474 0.453793 TGCGGTCCAAACACTTTGTG 59.546 50.000 0.00 0.00 38.98 3.33
497 498 6.508404 GCATCAAAACATTGATAAATGTCCGC 60.508 38.462 8.97 2.95 42.13 5.54
508 509 9.872721 ATATAAATGTGTGCATCAAAACATTGA 57.127 25.926 12.39 7.90 41.21 2.57
558 560 8.356657 ATCTTCTATAGAAATGTCCTTCGACAG 58.643 37.037 15.85 0.00 43.52 3.51
579 581 7.874016 AGAGATGTATCATGAAAGCTGATCTTC 59.126 37.037 0.00 0.00 35.12 2.87
656 658 2.924290 AGTCTATGTTTCTTTCGCTCGC 59.076 45.455 0.00 0.00 0.00 5.03
658 660 5.164954 ACTCAGTCTATGTTTCTTTCGCTC 58.835 41.667 0.00 0.00 0.00 5.03
662 664 7.439655 ACTGTGAACTCAGTCTATGTTTCTTTC 59.560 37.037 4.08 0.00 44.07 2.62
666 668 8.589335 TTTACTGTGAACTCAGTCTATGTTTC 57.411 34.615 11.80 0.00 45.79 2.78
669 671 6.591834 GCATTTACTGTGAACTCAGTCTATGT 59.408 38.462 11.80 0.00 45.79 2.29
678 680 8.289618 TGTTATTTGAGCATTTACTGTGAACTC 58.710 33.333 0.00 0.00 0.00 3.01
765 767 3.389925 TGTTAGTCTGTTGGTTACCCG 57.610 47.619 0.00 0.00 0.00 5.28
766 768 3.817084 GGTTGTTAGTCTGTTGGTTACCC 59.183 47.826 0.00 0.00 0.00 3.69
773 775 2.476619 CTCGCTGGTTGTTAGTCTGTTG 59.523 50.000 0.00 0.00 0.00 3.33
814 816 1.122019 AGGAGCCTCCGTCTTGTTGT 61.122 55.000 4.80 0.00 42.75 3.32
852 854 4.574892 GGACAGGAGAAAAGGAAGAGAAG 58.425 47.826 0.00 0.00 0.00 2.85
853 855 3.006967 CGGACAGGAGAAAAGGAAGAGAA 59.993 47.826 0.00 0.00 0.00 2.87
854 856 2.563179 CGGACAGGAGAAAAGGAAGAGA 59.437 50.000 0.00 0.00 0.00 3.10
855 857 2.354203 CCGGACAGGAGAAAAGGAAGAG 60.354 54.545 0.00 0.00 45.00 2.85
903 905 1.885157 CTACGGCGGTGGTCAGTTA 59.115 57.895 13.24 0.00 0.00 2.24
904 906 2.654877 CTACGGCGGTGGTCAGTT 59.345 61.111 13.24 0.00 0.00 3.16
905 907 4.065281 GCTACGGCGGTGGTCAGT 62.065 66.667 13.24 0.00 0.00 3.41
976 978 4.222847 GTCCTCCCCGTGATCGCC 62.223 72.222 0.00 0.00 35.54 5.54
977 979 4.570663 CGTCCTCCCCGTGATCGC 62.571 72.222 0.00 0.00 35.54 4.58
978 980 3.900892 CCGTCCTCCCCGTGATCG 61.901 72.222 0.00 0.00 0.00 3.69
979 981 4.222847 GCCGTCCTCCCCGTGATC 62.223 72.222 0.00 0.00 0.00 2.92
982 984 4.760047 CTTGCCGTCCTCCCCGTG 62.760 72.222 0.00 0.00 0.00 4.94
984 986 3.470888 ATCTTGCCGTCCTCCCCG 61.471 66.667 0.00 0.00 0.00 5.73
985 987 2.190578 CATCTTGCCGTCCTCCCC 59.809 66.667 0.00 0.00 0.00 4.81
986 988 1.144936 CTCATCTTGCCGTCCTCCC 59.855 63.158 0.00 0.00 0.00 4.30
987 989 1.522580 GCTCATCTTGCCGTCCTCC 60.523 63.158 0.00 0.00 0.00 4.30
988 990 0.179062 ATGCTCATCTTGCCGTCCTC 60.179 55.000 0.00 0.00 0.00 3.71
989 991 0.463295 CATGCTCATCTTGCCGTCCT 60.463 55.000 0.00 0.00 0.00 3.85
990 992 0.462581 TCATGCTCATCTTGCCGTCC 60.463 55.000 0.00 0.00 0.00 4.79
991 993 1.530293 GATCATGCTCATCTTGCCGTC 59.470 52.381 0.00 0.00 0.00 4.79
992 994 1.590932 GATCATGCTCATCTTGCCGT 58.409 50.000 0.00 0.00 0.00 5.68
993 995 0.511653 CGATCATGCTCATCTTGCCG 59.488 55.000 0.00 0.00 0.00 5.69
994 996 1.530293 GTCGATCATGCTCATCTTGCC 59.470 52.381 0.00 0.00 0.00 4.52
995 997 1.191868 CGTCGATCATGCTCATCTTGC 59.808 52.381 0.00 0.00 0.00 4.01
996 998 2.218075 CACGTCGATCATGCTCATCTTG 59.782 50.000 0.00 0.00 0.00 3.02
997 999 2.467838 CACGTCGATCATGCTCATCTT 58.532 47.619 0.00 0.00 0.00 2.40
998 1000 1.867289 GCACGTCGATCATGCTCATCT 60.867 52.381 0.00 0.00 36.40 2.90
999 1001 0.506080 GCACGTCGATCATGCTCATC 59.494 55.000 0.00 0.00 36.40 2.92
1000 1002 0.103755 AGCACGTCGATCATGCTCAT 59.896 50.000 13.43 0.00 46.68 2.90
1047 1256 1.349973 GGCGTCGTACCTCTCGTAC 59.650 63.158 0.00 0.00 43.45 3.67
1408 1628 2.442212 TCGAGTTGATGGCGTGTAAA 57.558 45.000 0.00 0.00 0.00 2.01
1409 1629 2.536365 GATCGAGTTGATGGCGTGTAA 58.464 47.619 0.00 0.00 37.47 2.41
1410 1630 1.202371 GGATCGAGTTGATGGCGTGTA 60.202 52.381 0.00 0.00 37.47 2.90
1411 1631 0.460284 GGATCGAGTTGATGGCGTGT 60.460 55.000 0.00 0.00 37.47 4.49
1412 1632 1.482621 CGGATCGAGTTGATGGCGTG 61.483 60.000 0.00 0.00 37.47 5.34
1413 1633 1.226974 CGGATCGAGTTGATGGCGT 60.227 57.895 0.00 0.00 37.47 5.68
1462 1694 5.047021 GGAAACTCATCGGGATGATCTATCA 60.047 44.000 11.48 0.00 45.74 2.15
1463 1695 5.415221 GGAAACTCATCGGGATGATCTATC 58.585 45.833 11.48 8.08 45.74 2.08
1486 1718 5.053221 CGTTCAGACATTCGTACTTGTATCG 60.053 44.000 0.00 0.00 0.00 2.92
1493 1725 5.055642 TCAATCGTTCAGACATTCGTACT 57.944 39.130 0.00 0.00 0.00 2.73
1494 1726 5.118050 TGTTCAATCGTTCAGACATTCGTAC 59.882 40.000 0.00 0.00 0.00 3.67
1503 1735 3.426560 GCATGCATGTTCAATCGTTCAGA 60.427 43.478 26.79 0.00 0.00 3.27
1504 1736 2.850060 GCATGCATGTTCAATCGTTCAG 59.150 45.455 26.79 0.00 0.00 3.02
1511 1743 3.445805 TCATCTGTGCATGCATGTTCAAT 59.554 39.130 25.64 16.80 0.00 2.57
1742 2030 2.027745 GGAACATGAGAGGCAAGTCTGA 60.028 50.000 0.00 0.00 0.00 3.27
1746 2034 0.036010 CCGGAACATGAGAGGCAAGT 60.036 55.000 0.00 0.00 0.00 3.16
1748 2036 0.321564 CACCGGAACATGAGAGGCAA 60.322 55.000 9.46 0.00 0.00 4.52
1751 2039 0.107508 ATGCACCGGAACATGAGAGG 60.108 55.000 9.46 0.00 0.00 3.69
1757 2045 2.086869 CTGAAGAATGCACCGGAACAT 58.913 47.619 9.46 8.50 0.00 2.71
1761 2049 2.301870 ACTAACTGAAGAATGCACCGGA 59.698 45.455 9.46 0.00 0.00 5.14
1840 2128 3.790091 TCGTCACGCTAGATACTACAGT 58.210 45.455 0.00 0.00 0.00 3.55
1921 2210 5.532406 TCTGAAAGAGAACCAAATCCTTGTG 59.468 40.000 0.00 0.00 38.67 3.33
1937 2226 3.053991 TGGTTGGTTCCAACTCTGAAAGA 60.054 43.478 26.80 5.20 43.94 2.52
1938 2227 3.287222 TGGTTGGTTCCAACTCTGAAAG 58.713 45.455 26.80 0.00 43.94 2.62
1939 2228 3.374042 TGGTTGGTTCCAACTCTGAAA 57.626 42.857 26.80 9.43 43.94 2.69
1940 2229 3.221771 CATGGTTGGTTCCAACTCTGAA 58.778 45.455 26.80 12.92 43.94 3.02
1941 2230 2.174639 ACATGGTTGGTTCCAACTCTGA 59.825 45.455 26.80 13.60 43.94 3.27
1942 2231 2.586425 ACATGGTTGGTTCCAACTCTG 58.414 47.619 26.80 24.31 43.94 3.35
1943 2232 3.312736 AACATGGTTGGTTCCAACTCT 57.687 42.857 26.80 15.56 43.94 3.24
1944 2233 3.977427 GAAACATGGTTGGTTCCAACTC 58.023 45.455 26.80 19.34 42.66 3.01
1951 2240 2.650322 ACACGAGAAACATGGTTGGTT 58.350 42.857 0.00 0.00 34.75 3.67
1952 2241 2.341846 ACACGAGAAACATGGTTGGT 57.658 45.000 0.00 0.00 0.00 3.67
1953 2242 3.066064 TGAAACACGAGAAACATGGTTGG 59.934 43.478 0.00 0.00 0.00 3.77
1954 2243 4.285807 TGAAACACGAGAAACATGGTTG 57.714 40.909 0.00 0.00 0.00 3.77
1955 2244 4.398044 AGTTGAAACACGAGAAACATGGTT 59.602 37.500 0.00 0.00 0.00 3.67
1956 2245 3.945285 AGTTGAAACACGAGAAACATGGT 59.055 39.130 0.00 0.00 0.00 3.55
1957 2246 4.552166 AGTTGAAACACGAGAAACATGG 57.448 40.909 0.00 0.00 0.00 3.66
1958 2247 6.027131 TGAAAGTTGAAACACGAGAAACATG 58.973 36.000 0.00 0.00 0.00 3.21
2066 2355 0.109532 TGTTGCCTGTTTGATCCGGA 59.890 50.000 6.61 6.61 0.00 5.14
2096 2385 5.410067 ACAGAAATTGATTTAATGGGCACG 58.590 37.500 0.00 0.00 0.00 5.34
2124 2413 0.879090 TCGAAAGTCGACTGCTAGCA 59.121 50.000 20.85 18.22 44.82 3.49
2186 2602 1.302907 AATGAGGTCCAGCCCTTCAT 58.697 50.000 0.00 0.00 38.26 2.57
2218 2634 0.317854 GCCAGGTTTTTCAGCGTGTC 60.318 55.000 0.00 0.00 0.00 3.67
2277 2693 3.311167 TGGGTTATTATGCATGCCACT 57.689 42.857 16.68 2.24 0.00 4.00
2306 2722 5.244851 AGAGTCAATTGTAGCTCAAGAGTCA 59.755 40.000 20.52 0.00 39.55 3.41
2307 2723 5.719173 AGAGTCAATTGTAGCTCAAGAGTC 58.281 41.667 20.52 2.73 39.55 3.36
2309 2725 6.162079 TCAAGAGTCAATTGTAGCTCAAGAG 58.838 40.000 20.52 0.00 39.55 2.85
2313 2741 5.871524 GTCATCAAGAGTCAATTGTAGCTCA 59.128 40.000 20.52 8.29 0.00 4.26
2337 2765 2.673368 GTCCAGTTCCTGCAGAATTACG 59.327 50.000 17.39 0.00 36.69 3.18
2443 2871 7.443302 TCATCTATGGAAAAGACAGAAGGAT 57.557 36.000 0.00 0.00 0.00 3.24
2448 2876 7.391554 CCAGTTTTCATCTATGGAAAAGACAGA 59.608 37.037 0.00 0.00 42.87 3.41
2474 2902 5.159209 GCAGAAAATACCATGCATATCAGC 58.841 41.667 0.00 0.00 38.54 4.26
2575 3003 2.614259 TCATCAGGGATCTAAGGGAGC 58.386 52.381 0.00 0.00 0.00 4.70
2699 3131 2.769663 ACCAATGCCAAGAATGATGCAT 59.230 40.909 0.00 0.00 45.79 3.96
2751 3183 3.181451 TGGCTTGGAGCATAATCAGTAGG 60.181 47.826 2.04 0.00 44.75 3.18
2778 3210 2.294233 TGTGAGATGAAAACTGGCAAGC 59.706 45.455 0.00 0.00 0.00 4.01
2809 3244 4.848841 CGAGTACGCTGCATAATAAGAGAG 59.151 45.833 0.00 0.00 0.00 3.20
2834 3269 3.684788 ACCATGTTACGAAGATTCACTGC 59.315 43.478 0.00 0.00 0.00 4.40
2906 3343 7.958025 GCAACTTTAACAATAAGCAGAGTAGTC 59.042 37.037 0.00 0.00 0.00 2.59
2992 3441 1.300620 TTGTGGAGCGGAGTTGTCG 60.301 57.895 0.00 0.00 0.00 4.35
2998 3447 2.125912 CGGAGTTGTGGAGCGGAG 60.126 66.667 0.00 0.00 0.00 4.63
3000 3449 4.760047 CCCGGAGTTGTGGAGCGG 62.760 72.222 0.73 0.00 0.00 5.52
3002 3451 2.266055 CTCCCGGAGTTGTGGAGC 59.734 66.667 0.73 0.00 39.29 4.70
3003 3452 2.266055 GCTCCCGGAGTTGTGGAG 59.734 66.667 16.09 0.00 46.87 3.86
3004 3453 3.691342 CGCTCCCGGAGTTGTGGA 61.691 66.667 16.09 0.00 31.39 4.02
3016 3465 4.821589 CTCCGCCAACTCCGCTCC 62.822 72.222 0.00 0.00 0.00 4.70
3019 3468 2.083835 TATAGCTCCGCCAACTCCGC 62.084 60.000 0.00 0.00 0.00 5.54
3020 3469 0.039074 CTATAGCTCCGCCAACTCCG 60.039 60.000 0.00 0.00 0.00 4.63
3021 3470 1.041437 ACTATAGCTCCGCCAACTCC 58.959 55.000 0.00 0.00 0.00 3.85
3022 3471 2.892784 AACTATAGCTCCGCCAACTC 57.107 50.000 0.00 0.00 0.00 3.01
3023 3472 4.748277 TTAAACTATAGCTCCGCCAACT 57.252 40.909 0.00 0.00 0.00 3.16
3024 3473 5.566623 GTTTTAAACTATAGCTCCGCCAAC 58.433 41.667 0.00 0.00 0.00 3.77
3025 3474 4.330620 CGTTTTAAACTATAGCTCCGCCAA 59.669 41.667 6.27 0.00 0.00 4.52
3026 3475 3.866910 CGTTTTAAACTATAGCTCCGCCA 59.133 43.478 6.27 0.00 0.00 5.69
3027 3476 3.246936 CCGTTTTAAACTATAGCTCCGCC 59.753 47.826 6.27 0.00 0.00 6.13
3028 3477 3.302935 GCCGTTTTAAACTATAGCTCCGC 60.303 47.826 6.27 0.00 0.00 5.54
3029 3478 3.060740 CGCCGTTTTAAACTATAGCTCCG 60.061 47.826 6.27 0.00 0.00 4.63
3030 3479 3.246936 CCGCCGTTTTAAACTATAGCTCC 59.753 47.826 6.27 0.00 0.00 4.70
3031 3480 4.114794 TCCGCCGTTTTAAACTATAGCTC 58.885 43.478 6.27 0.00 0.00 4.09
3032 3481 4.117685 CTCCGCCGTTTTAAACTATAGCT 58.882 43.478 6.27 0.00 0.00 3.32
3035 3484 3.866910 CAGCTCCGCCGTTTTAAACTATA 59.133 43.478 6.27 0.00 0.00 1.31
3037 3486 2.070783 CAGCTCCGCCGTTTTAAACTA 58.929 47.619 6.27 0.00 0.00 2.24
3038 3487 0.872388 CAGCTCCGCCGTTTTAAACT 59.128 50.000 6.27 0.00 0.00 2.66
3039 3488 0.728129 GCAGCTCCGCCGTTTTAAAC 60.728 55.000 0.00 0.00 0.00 2.01
3041 3490 1.598407 TGCAGCTCCGCCGTTTTAA 60.598 52.632 0.00 0.00 0.00 1.52
3043 3492 3.660111 GTGCAGCTCCGCCGTTTT 61.660 61.111 0.00 0.00 0.00 2.43
3044 3493 4.626081 AGTGCAGCTCCGCCGTTT 62.626 61.111 0.00 0.00 0.00 3.60
3045 3494 4.626081 AAGTGCAGCTCCGCCGTT 62.626 61.111 0.00 0.00 0.00 4.44
3050 3499 4.785453 GGGGGAAGTGCAGCTCCG 62.785 72.222 7.71 0.00 0.00 4.63
3051 3500 4.785453 CGGGGGAAGTGCAGCTCC 62.785 72.222 5.56 5.56 0.00 4.70
3055 3504 3.710722 AGAGCGGGGGAAGTGCAG 61.711 66.667 0.00 0.00 0.00 4.41
3058 3507 3.965539 CTGCAGAGCGGGGGAAGTG 62.966 68.421 8.42 0.00 0.00 3.16
3061 3510 2.257409 GAATCTGCAGAGCGGGGGAA 62.257 60.000 22.96 0.00 35.34 3.97
3062 3511 2.688666 AATCTGCAGAGCGGGGGA 60.689 61.111 22.96 0.00 35.34 4.81
3065 3514 1.523258 CTGGAATCTGCAGAGCGGG 60.523 63.158 22.96 7.27 38.14 6.13
3066 3515 1.523258 CCTGGAATCTGCAGAGCGG 60.523 63.158 22.96 12.90 38.14 5.52
3068 3517 0.814812 GCTCCTGGAATCTGCAGAGC 60.815 60.000 22.96 15.89 38.14 4.09
3072 3521 2.586245 CCGCTCCTGGAATCTGCA 59.414 61.111 0.00 0.00 0.00 4.41
3073 3522 2.203126 CCCGCTCCTGGAATCTGC 60.203 66.667 0.00 0.00 0.00 4.26
3074 3523 2.203126 GCCCGCTCCTGGAATCTG 60.203 66.667 0.00 0.00 0.00 2.90
3075 3524 3.854669 CGCCCGCTCCTGGAATCT 61.855 66.667 0.00 0.00 0.00 2.40
3077 3526 4.162690 GTCGCCCGCTCCTGGAAT 62.163 66.667 0.00 0.00 0.00 3.01
3078 3527 3.949885 TAGTCGCCCGCTCCTGGAA 62.950 63.158 0.00 0.00 0.00 3.53
3079 3528 4.435970 TAGTCGCCCGCTCCTGGA 62.436 66.667 0.00 0.00 0.00 3.86
3080 3529 4.208686 GTAGTCGCCCGCTCCTGG 62.209 72.222 0.00 0.00 0.00 4.45
3081 3530 4.208686 GGTAGTCGCCCGCTCCTG 62.209 72.222 0.00 0.00 0.00 3.86
3084 3533 3.818787 TTCGGTAGTCGCCCGCTC 61.819 66.667 0.00 0.00 45.09 5.03
3085 3534 4.125695 GTTCGGTAGTCGCCCGCT 62.126 66.667 0.00 0.00 45.09 5.52
3087 3536 1.804326 CTTGTTCGGTAGTCGCCCG 60.804 63.158 0.00 0.00 46.83 6.13
3088 3537 1.447314 CCTTGTTCGGTAGTCGCCC 60.447 63.158 0.00 0.00 39.05 6.13
3089 3538 2.098831 GCCTTGTTCGGTAGTCGCC 61.099 63.158 0.00 0.00 39.05 5.54
3090 3539 2.098831 GGCCTTGTTCGGTAGTCGC 61.099 63.158 0.00 0.00 39.05 5.19
3091 3540 0.813184 TAGGCCTTGTTCGGTAGTCG 59.187 55.000 12.58 0.00 40.90 4.18
3092 3541 2.233186 ACTTAGGCCTTGTTCGGTAGTC 59.767 50.000 12.58 0.00 0.00 2.59
3093 3542 2.254508 ACTTAGGCCTTGTTCGGTAGT 58.745 47.619 12.58 0.00 0.00 2.73
3094 3543 3.446516 AGTACTTAGGCCTTGTTCGGTAG 59.553 47.826 12.58 0.00 0.00 3.18
3095 3544 3.434309 AGTACTTAGGCCTTGTTCGGTA 58.566 45.455 12.58 2.88 0.00 4.02
3096 3545 2.233186 GAGTACTTAGGCCTTGTTCGGT 59.767 50.000 12.58 3.90 0.00 4.69
3097 3546 2.418334 GGAGTACTTAGGCCTTGTTCGG 60.418 54.545 12.58 0.00 0.00 4.30
3098 3547 2.496470 AGGAGTACTTAGGCCTTGTTCG 59.504 50.000 12.58 0.00 0.00 3.95
3099 3548 3.118702 GGAGGAGTACTTAGGCCTTGTTC 60.119 52.174 12.58 8.85 0.00 3.18
3100 3549 2.838813 GGAGGAGTACTTAGGCCTTGTT 59.161 50.000 12.58 0.00 0.00 2.83
3101 3550 2.468915 GGAGGAGTACTTAGGCCTTGT 58.531 52.381 12.58 13.69 0.00 3.16
3102 3551 1.409427 CGGAGGAGTACTTAGGCCTTG 59.591 57.143 12.58 7.32 0.00 3.61
3103 3552 1.006878 ACGGAGGAGTACTTAGGCCTT 59.993 52.381 12.58 0.00 0.00 4.35
3104 3553 0.630134 ACGGAGGAGTACTTAGGCCT 59.370 55.000 11.78 11.78 0.00 5.19
3105 3554 1.031235 GACGGAGGAGTACTTAGGCC 58.969 60.000 0.00 0.00 0.00 5.19
3106 3555 1.031235 GGACGGAGGAGTACTTAGGC 58.969 60.000 0.00 0.00 0.00 3.93
3107 3556 1.064166 TGGGACGGAGGAGTACTTAGG 60.064 57.143 0.00 0.00 0.00 2.69
3108 3557 2.431954 TGGGACGGAGGAGTACTTAG 57.568 55.000 0.00 0.00 0.00 2.18
3109 3558 4.524802 TTATGGGACGGAGGAGTACTTA 57.475 45.455 0.00 0.00 0.00 2.24
3110 3559 3.393426 TTATGGGACGGAGGAGTACTT 57.607 47.619 0.00 0.00 0.00 2.24
3111 3560 3.614568 ATTATGGGACGGAGGAGTACT 57.385 47.619 0.00 0.00 0.00 2.73
3112 3561 6.888632 TCTTATATTATGGGACGGAGGAGTAC 59.111 42.308 0.00 0.00 0.00 2.73
3113 3562 6.888632 GTCTTATATTATGGGACGGAGGAGTA 59.111 42.308 0.00 0.00 0.00 2.59
3114 3563 5.715753 GTCTTATATTATGGGACGGAGGAGT 59.284 44.000 0.00 0.00 0.00 3.85
3115 3564 5.715279 TGTCTTATATTATGGGACGGAGGAG 59.285 44.000 0.00 0.00 0.00 3.69
3116 3565 5.647230 TGTCTTATATTATGGGACGGAGGA 58.353 41.667 0.00 0.00 0.00 3.71
3117 3566 5.995565 TGTCTTATATTATGGGACGGAGG 57.004 43.478 0.00 0.00 0.00 4.30
3191 3670 3.316588 TCTTTTGCGTGCAAAACAGGATA 59.683 39.130 24.40 6.97 46.80 2.59
3194 4843 1.919918 TCTTTTGCGTGCAAAACAGG 58.080 45.000 24.40 16.71 46.80 4.00
3204 4853 3.753272 AGTACAATGCAGATCTTTTGCGT 59.247 39.130 0.00 0.00 44.40 5.24
3208 4857 5.184892 AGGGAGTACAATGCAGATCTTTT 57.815 39.130 0.00 0.00 0.00 2.27
3210 4859 3.135530 GGAGGGAGTACAATGCAGATCTT 59.864 47.826 0.00 0.00 0.00 2.40
3217 4866 0.179081 GGACGGAGGGAGTACAATGC 60.179 60.000 0.00 0.00 0.00 3.56
3218 4867 0.102481 CGGACGGAGGGAGTACAATG 59.898 60.000 0.00 0.00 0.00 2.82
3219 4868 0.033796 TCGGACGGAGGGAGTACAAT 60.034 55.000 0.00 0.00 0.00 2.71
3220 4869 0.251297 TTCGGACGGAGGGAGTACAA 60.251 55.000 0.00 0.00 0.00 2.41
3221 4870 0.251297 TTTCGGACGGAGGGAGTACA 60.251 55.000 0.00 0.00 0.00 2.90
3227 4876 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3228 4877 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3232 4881 5.524511 TCAATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
3237 4886 9.643693 ACATCCATTTCAATGACAAGTATTTTC 57.356 29.630 0.81 0.00 38.70 2.29
3244 4893 9.112725 TCTACATACATCCATTTCAATGACAAG 57.887 33.333 0.81 0.00 38.70 3.16
3245 4894 9.631257 ATCTACATACATCCATTTCAATGACAA 57.369 29.630 0.81 0.00 38.70 3.18
3246 4895 9.059260 CATCTACATACATCCATTTCAATGACA 57.941 33.333 0.81 0.00 38.70 3.58
3271 4920 8.662141 GCTCGGAATTACTTGAACTAAAATACA 58.338 33.333 0.00 0.00 0.00 2.29
3272 4921 7.844653 CGCTCGGAATTACTTGAACTAAAATAC 59.155 37.037 0.00 0.00 0.00 1.89
3273 4922 7.010738 CCGCTCGGAATTACTTGAACTAAAATA 59.989 37.037 1.35 0.00 37.50 1.40
3274 4923 6.183360 CCGCTCGGAATTACTTGAACTAAAAT 60.183 38.462 1.35 0.00 37.50 1.82
3275 4924 5.121142 CCGCTCGGAATTACTTGAACTAAAA 59.879 40.000 1.35 0.00 37.50 1.52
3276 4925 4.628333 CCGCTCGGAATTACTTGAACTAAA 59.372 41.667 1.35 0.00 37.50 1.85
3277 4926 4.082081 TCCGCTCGGAATTACTTGAACTAA 60.082 41.667 8.76 0.00 42.05 2.24
3278 4927 3.444742 TCCGCTCGGAATTACTTGAACTA 59.555 43.478 8.76 0.00 42.05 2.24
3279 4928 2.232941 TCCGCTCGGAATTACTTGAACT 59.767 45.455 8.76 0.00 42.05 3.01
3280 4929 2.613691 TCCGCTCGGAATTACTTGAAC 58.386 47.619 8.76 0.00 42.05 3.18
3292 4941 1.300233 GCTAACTCCATCCGCTCGG 60.300 63.158 1.14 1.14 0.00 4.63
3293 4942 0.179111 TTGCTAACTCCATCCGCTCG 60.179 55.000 0.00 0.00 0.00 5.03
3294 4943 1.936547 CTTTGCTAACTCCATCCGCTC 59.063 52.381 0.00 0.00 0.00 5.03
3295 4944 1.407437 CCTTTGCTAACTCCATCCGCT 60.407 52.381 0.00 0.00 0.00 5.52
3296 4945 1.017387 CCTTTGCTAACTCCATCCGC 58.983 55.000 0.00 0.00 0.00 5.54
3297 4946 2.691409 TCCTTTGCTAACTCCATCCG 57.309 50.000 0.00 0.00 0.00 4.18
3298 4947 7.148171 GCATATATTCCTTTGCTAACTCCATCC 60.148 40.741 0.00 0.00 32.41 3.51
3299 4948 7.609532 AGCATATATTCCTTTGCTAACTCCATC 59.390 37.037 0.00 0.00 43.28 3.51
3300 4949 7.465116 AGCATATATTCCTTTGCTAACTCCAT 58.535 34.615 0.00 0.00 43.28 3.41
3301 4950 6.841601 AGCATATATTCCTTTGCTAACTCCA 58.158 36.000 0.00 0.00 43.28 3.86
3302 4951 6.936900 TGAGCATATATTCCTTTGCTAACTCC 59.063 38.462 0.00 0.00 44.98 3.85
3303 4952 7.118971 CCTGAGCATATATTCCTTTGCTAACTC 59.881 40.741 0.00 0.00 44.98 3.01
3304 4953 6.939163 CCTGAGCATATATTCCTTTGCTAACT 59.061 38.462 0.00 0.00 44.98 2.24
3305 4954 6.348868 GCCTGAGCATATATTCCTTTGCTAAC 60.349 42.308 0.00 0.00 44.98 2.34
3360 5010 5.336849 GCTACTGTGGTCTTCTGTTATGTCT 60.337 44.000 0.00 0.00 0.00 3.41
3446 5099 2.553086 TGGGAAGTTGTTGTACACGAC 58.447 47.619 0.00 1.44 39.90 4.34
3507 5163 6.000840 TGACTGGCATGTTAATGTAGTTTGA 58.999 36.000 0.00 0.00 35.13 2.69
3592 5248 4.067192 GCAAAATTTGATGCTTGTTCCCT 58.933 39.130 10.26 0.00 39.46 4.20
3615 5271 4.621886 GGTCGACTGAGTATCTTGTGTTTC 59.378 45.833 16.46 0.00 34.92 2.78
3756 5419 2.890945 CAAAAAGAACCCTCGGGACATT 59.109 45.455 9.43 0.00 38.96 2.71
3819 5482 4.920640 CGAGGATGTGGTAACTATCTGT 57.079 45.455 0.00 0.00 33.30 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.