Multiple sequence alignment - TraesCS5B01G185900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G185900 chr5B 100.000 5419 0 0 1 5419 337463016 337468434 0.000000e+00 10008.0
1 TraesCS5B01G185900 chr5A 96.052 2330 59 8 2555 4855 401760748 401758423 0.000000e+00 3762.0
2 TraesCS5B01G185900 chr5A 91.030 1204 66 18 1309 2494 401762586 401761407 0.000000e+00 1587.0
3 TraesCS5B01G185900 chr5A 91.990 824 29 12 764 1578 401763395 401762600 0.000000e+00 1122.0
4 TraesCS5B01G185900 chr5A 85.277 523 49 18 220 731 401764141 401763636 1.040000e-141 514.0
5 TraesCS5B01G185900 chr5A 86.241 407 48 8 5018 5419 401757983 401757580 8.340000e-118 435.0
6 TraesCS5B01G185900 chr5A 92.933 283 10 4 2292 2564 401761203 401760921 2.350000e-108 403.0
7 TraesCS5B01G185900 chr5A 88.732 213 14 4 2292 2494 401761411 401761199 9.010000e-63 252.0
8 TraesCS5B01G185900 chr5A 80.423 189 33 4 361 546 613739948 613739761 2.030000e-29 141.0
9 TraesCS5B01G185900 chr5D 95.612 2074 70 5 2555 4611 297309718 297311787 0.000000e+00 3306.0
10 TraesCS5B01G185900 chr5D 91.493 1246 61 20 1270 2494 297307838 297309059 0.000000e+00 1672.0
11 TraesCS5B01G185900 chr5D 97.120 764 19 3 816 1578 297307081 297307842 0.000000e+00 1286.0
12 TraesCS5B01G185900 chr5D 95.486 288 12 1 4644 4930 297311786 297312073 4.950000e-125 459.0
13 TraesCS5B01G185900 chr5D 86.104 403 38 8 5019 5419 297312073 297312459 8.390000e-113 418.0
14 TraesCS5B01G185900 chr5D 93.286 283 9 4 2292 2564 297309263 297309545 5.050000e-110 409.0
15 TraesCS5B01G185900 chr5D 90.141 213 11 4 2292 2494 297309055 297309267 8.950000e-68 268.0
16 TraesCS5B01G185900 chr5D 90.217 184 14 3 394 576 297303763 297303943 2.520000e-58 237.0
17 TraesCS5B01G185900 chr5D 83.465 127 17 4 5251 5374 97831721 97831846 1.230000e-21 115.0
18 TraesCS5B01G185900 chr5D 86.667 90 2 7 636 723 297306497 297306578 2.080000e-14 91.6
19 TraesCS5B01G185900 chr6A 80.526 190 27 10 360 541 117436726 117436539 2.630000e-28 137.0
20 TraesCS5B01G185900 chrUn 92.308 91 5 2 4923 5013 378270565 378270653 1.580000e-25 128.0
21 TraesCS5B01G185900 chrUn 92.308 91 5 2 4923 5013 447954349 447954261 1.580000e-25 128.0
22 TraesCS5B01G185900 chrUn 78.981 157 28 4 360 512 332139809 332139964 9.600000e-18 102.0
23 TraesCS5B01G185900 chr7D 93.182 88 5 1 4926 5013 171549089 171549003 1.580000e-25 128.0
24 TraesCS5B01G185900 chr6B 90.000 100 8 2 4927 5026 216509842 216509745 1.580000e-25 128.0
25 TraesCS5B01G185900 chr6B 83.740 123 19 1 5249 5370 240044950 240044828 1.230000e-21 115.0
26 TraesCS5B01G185900 chr6B 100.000 31 0 0 221 251 289698825 289698795 2.110000e-04 58.4
27 TraesCS5B01G185900 chr3D 91.489 94 7 1 4920 5013 545547788 545547880 1.580000e-25 128.0
28 TraesCS5B01G185900 chr3D 93.103 87 4 2 4926 5012 173622446 173622530 5.700000e-25 126.0
29 TraesCS5B01G185900 chr3D 85.841 113 13 2 5260 5370 182423629 182423518 3.430000e-22 117.0
30 TraesCS5B01G185900 chr3B 93.182 88 5 1 4926 5013 104711993 104712079 1.580000e-25 128.0
31 TraesCS5B01G185900 chr1D 89.423 104 7 4 4927 5027 115990007 115989905 1.580000e-25 128.0
32 TraesCS5B01G185900 chr2D 91.398 93 7 1 4921 5013 246544377 246544468 5.700000e-25 126.0
33 TraesCS5B01G185900 chr2D 100.000 31 0 0 5 35 612331943 612331913 2.110000e-04 58.4
34 TraesCS5B01G185900 chr1B 86.842 114 14 1 5260 5372 332136165 332136278 5.700000e-25 126.0
35 TraesCS5B01G185900 chr1B 78.037 214 34 10 336 540 573385484 573385693 7.370000e-24 122.0
36 TraesCS5B01G185900 chr1B 85.366 123 9 6 5254 5371 3239970 3240088 9.540000e-23 119.0
37 TraesCS5B01G185900 chr1B 79.487 156 30 2 359 512 77550576 77550421 5.740000e-20 110.0
38 TraesCS5B01G185900 chr4D 86.207 116 15 1 5254 5368 323605978 323606093 2.050000e-24 124.0
39 TraesCS5B01G185900 chr6D 83.465 127 18 3 5249 5373 90112116 90111991 1.230000e-21 115.0
40 TraesCS5B01G185900 chr6D 96.875 32 1 0 3 34 427470632 427470663 3.000000e-03 54.7
41 TraesCS5B01G185900 chr7A 79.012 162 32 2 353 512 18542017 18542178 5.740000e-20 110.0
42 TraesCS5B01G185900 chr7A 81.013 79 14 1 1 78 723737536 723737614 1.630000e-05 62.1
43 TraesCS5B01G185900 chr2B 78.981 157 28 4 360 512 6884756 6884911 9.600000e-18 102.0
44 TraesCS5B01G185900 chr7B 74.857 175 32 11 105 276 463160366 463160201 9.740000e-08 69.4
45 TraesCS5B01G185900 chr7B 80.000 80 13 3 1 78 729596496 729596574 7.580000e-04 56.5
46 TraesCS5B01G185900 chr4B 87.500 56 7 0 223 278 103888811 103888756 1.260000e-06 65.8
47 TraesCS5B01G185900 chr4B 87.500 56 7 0 223 278 104003365 104003310 1.260000e-06 65.8
48 TraesCS5B01G185900 chr4B 87.500 56 7 0 223 278 104129274 104129219 1.260000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G185900 chr5B 337463016 337468434 5418 False 10008.000000 10008 100.000000 1 5419 1 chr5B.!!$F1 5418
1 TraesCS5B01G185900 chr5A 401757580 401764141 6561 True 1153.571429 3762 90.322143 220 5419 7 chr5A.!!$R2 5199
2 TraesCS5B01G185900 chr5D 297303763 297312459 8696 False 905.177778 3306 91.791778 394 5419 9 chr5D.!!$F2 5025

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
201 202 0.034756 TGAGGTGTGACCGACCATTG 59.965 55.000 0.00 0.0 44.90 2.82 F
202 203 0.034896 GAGGTGTGACCGACCATTGT 59.965 55.000 0.00 0.0 44.90 2.71 F
203 204 0.034896 AGGTGTGACCGACCATTGTC 59.965 55.000 0.00 0.0 44.90 3.18 F
205 206 0.250124 GTGTGACCGACCATTGTCCA 60.250 55.000 0.00 0.0 38.32 4.02 F
261 262 0.675522 CCGGATTTGGTGTAAGCGGT 60.676 55.000 0.00 0.0 36.92 5.68 F
1465 4406 0.889186 GAAATGTGTGACCGCACCCT 60.889 55.000 10.72 0.0 44.51 4.34 F
2387 6054 1.001633 ACATACGGTTGCGAAGGAGTT 59.998 47.619 0.00 0.0 0.00 3.01 F
3611 7471 0.826715 CACTCCGAGGTGTCCATGAT 59.173 55.000 0.00 0.0 33.04 2.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1664 4912 1.292223 GCACTGAGCAGGAACCGTA 59.708 57.895 2.20 0.0 44.79 4.02 R
1665 4913 2.031163 GCACTGAGCAGGAACCGT 59.969 61.111 2.20 0.0 44.79 4.83 R
1918 5166 3.216800 CACTGGTATGCGTAGTACCCTA 58.783 50.000 9.50 0.0 40.72 3.53 R
2167 5417 4.038642 TGAAACACAAAATGGGCTAGGAAC 59.961 41.667 0.00 0.0 0.00 3.62 R
2239 5493 6.380274 ACGAATAACAATGAGACCTAGAAGGA 59.620 38.462 0.00 0.0 37.67 3.36 R
2874 6734 0.179048 GCCATGTCCATGTCCATCGA 60.179 55.000 6.53 0.0 37.11 3.59 R
4124 7984 1.135689 CCTTCGAGTTCGGCCAATTTG 60.136 52.381 2.24 0.0 40.29 2.32 R
5383 9650 0.460284 CTCACCATTTCGTCCTCGGG 60.460 60.000 0.00 0.0 37.69 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.592485 CATGTCCCATGTCCTACTCTAC 57.408 50.000 0.00 0.00 0.00 2.59
22 23 3.028094 TGTCCCATGTCCTACTCTACC 57.972 52.381 0.00 0.00 0.00 3.18
23 24 2.585900 TGTCCCATGTCCTACTCTACCT 59.414 50.000 0.00 0.00 0.00 3.08
24 25 3.224269 GTCCCATGTCCTACTCTACCTC 58.776 54.545 0.00 0.00 0.00 3.85
25 26 2.856864 TCCCATGTCCTACTCTACCTCA 59.143 50.000 0.00 0.00 0.00 3.86
26 27 2.959707 CCCATGTCCTACTCTACCTCAC 59.040 54.545 0.00 0.00 0.00 3.51
27 28 2.959707 CCATGTCCTACTCTACCTCACC 59.040 54.545 0.00 0.00 0.00 4.02
28 29 2.414994 TGTCCTACTCTACCTCACCG 57.585 55.000 0.00 0.00 0.00 4.94
29 30 1.911357 TGTCCTACTCTACCTCACCGA 59.089 52.381 0.00 0.00 0.00 4.69
30 31 2.287769 GTCCTACTCTACCTCACCGAC 58.712 57.143 0.00 0.00 0.00 4.79
31 32 1.134580 TCCTACTCTACCTCACCGACG 60.135 57.143 0.00 0.00 0.00 5.12
32 33 1.134580 CCTACTCTACCTCACCGACGA 60.135 57.143 0.00 0.00 0.00 4.20
33 34 1.932511 CTACTCTACCTCACCGACGAC 59.067 57.143 0.00 0.00 0.00 4.34
34 35 0.676151 ACTCTACCTCACCGACGACC 60.676 60.000 0.00 0.00 0.00 4.79
35 36 0.675837 CTCTACCTCACCGACGACCA 60.676 60.000 0.00 0.00 0.00 4.02
36 37 0.957395 TCTACCTCACCGACGACCAC 60.957 60.000 0.00 0.00 0.00 4.16
37 38 1.228215 TACCTCACCGACGACCACA 60.228 57.895 0.00 0.00 0.00 4.17
38 39 0.822944 TACCTCACCGACGACCACAA 60.823 55.000 0.00 0.00 0.00 3.33
39 40 1.663702 CCTCACCGACGACCACAAC 60.664 63.158 0.00 0.00 0.00 3.32
40 41 1.362717 CTCACCGACGACCACAACT 59.637 57.895 0.00 0.00 0.00 3.16
41 42 0.249322 CTCACCGACGACCACAACTT 60.249 55.000 0.00 0.00 0.00 2.66
42 43 0.249155 TCACCGACGACCACAACTTC 60.249 55.000 0.00 0.00 0.00 3.01
43 44 1.068585 ACCGACGACCACAACTTCC 59.931 57.895 0.00 0.00 0.00 3.46
44 45 1.366366 CCGACGACCACAACTTCCT 59.634 57.895 0.00 0.00 0.00 3.36
45 46 0.249741 CCGACGACCACAACTTCCTT 60.250 55.000 0.00 0.00 0.00 3.36
46 47 1.137513 CGACGACCACAACTTCCTTC 58.862 55.000 0.00 0.00 0.00 3.46
47 48 1.137513 GACGACCACAACTTCCTTCG 58.862 55.000 0.00 0.00 0.00 3.79
48 49 0.748450 ACGACCACAACTTCCTTCGA 59.252 50.000 0.00 0.00 0.00 3.71
49 50 1.269621 ACGACCACAACTTCCTTCGAG 60.270 52.381 0.00 0.00 0.00 4.04
50 51 1.797025 GACCACAACTTCCTTCGAGG 58.203 55.000 0.00 0.00 36.46 4.63
51 52 1.070289 GACCACAACTTCCTTCGAGGT 59.930 52.381 0.00 0.00 36.53 3.85
52 53 1.202651 ACCACAACTTCCTTCGAGGTG 60.203 52.381 0.00 0.00 37.83 4.00
53 54 0.868406 CACAACTTCCTTCGAGGTGC 59.132 55.000 0.00 0.00 35.21 5.01
54 55 0.759346 ACAACTTCCTTCGAGGTGCT 59.241 50.000 0.00 0.00 35.21 4.40
55 56 1.141053 ACAACTTCCTTCGAGGTGCTT 59.859 47.619 0.00 0.00 35.21 3.91
56 57 2.367567 ACAACTTCCTTCGAGGTGCTTA 59.632 45.455 0.00 0.00 35.21 3.09
57 58 2.996621 CAACTTCCTTCGAGGTGCTTAG 59.003 50.000 0.00 0.00 36.53 2.18
58 59 1.066787 ACTTCCTTCGAGGTGCTTAGC 60.067 52.381 0.00 0.00 36.53 3.09
59 60 0.249398 TTCCTTCGAGGTGCTTAGCC 59.751 55.000 0.29 0.00 36.53 3.93
60 61 1.519455 CCTTCGAGGTGCTTAGCCG 60.519 63.158 0.29 0.00 0.00 5.52
61 62 1.519455 CTTCGAGGTGCTTAGCCGG 60.519 63.158 0.29 0.00 0.00 6.13
62 63 3.659089 TTCGAGGTGCTTAGCCGGC 62.659 63.158 21.89 21.89 0.00 6.13
77 78 4.077184 GGCCGACGGACATGGACA 62.077 66.667 20.50 0.00 0.00 4.02
78 79 2.813908 GCCGACGGACATGGACAC 60.814 66.667 20.50 0.00 0.00 3.67
79 80 2.506217 CCGACGGACATGGACACG 60.506 66.667 8.64 0.00 0.00 4.49
80 81 2.564458 CGACGGACATGGACACGA 59.436 61.111 0.00 0.00 0.00 4.35
81 82 1.800315 CGACGGACATGGACACGAC 60.800 63.158 0.00 0.00 0.00 4.34
82 83 1.445582 GACGGACATGGACACGACC 60.446 63.158 0.00 0.00 0.00 4.79
83 84 2.149803 GACGGACATGGACACGACCA 62.150 60.000 0.00 0.00 44.41 4.02
97 98 2.840974 GACCATGGTGTCGGTGAAG 58.159 57.895 25.52 0.00 34.99 3.02
98 99 0.320374 GACCATGGTGTCGGTGAAGA 59.680 55.000 25.52 0.00 34.99 2.87
99 100 0.984230 ACCATGGTGTCGGTGAAGAT 59.016 50.000 18.99 0.00 33.05 2.40
100 101 1.351017 ACCATGGTGTCGGTGAAGATT 59.649 47.619 18.99 0.00 33.05 2.40
101 102 2.224769 ACCATGGTGTCGGTGAAGATTT 60.225 45.455 18.99 0.00 33.05 2.17
102 103 3.008594 ACCATGGTGTCGGTGAAGATTTA 59.991 43.478 18.99 0.00 33.05 1.40
103 104 3.374058 CCATGGTGTCGGTGAAGATTTAC 59.626 47.826 2.57 0.00 0.00 2.01
104 105 3.755112 TGGTGTCGGTGAAGATTTACA 57.245 42.857 0.00 0.00 0.00 2.41
105 106 4.280436 TGGTGTCGGTGAAGATTTACAT 57.720 40.909 0.00 0.00 0.00 2.29
106 107 4.647611 TGGTGTCGGTGAAGATTTACATT 58.352 39.130 0.00 0.00 0.00 2.71
107 108 5.795972 TGGTGTCGGTGAAGATTTACATTA 58.204 37.500 0.00 0.00 0.00 1.90
108 109 5.872617 TGGTGTCGGTGAAGATTTACATTAG 59.127 40.000 0.00 0.00 0.00 1.73
109 110 5.293569 GGTGTCGGTGAAGATTTACATTAGG 59.706 44.000 0.00 0.00 0.00 2.69
110 111 5.873164 GTGTCGGTGAAGATTTACATTAGGT 59.127 40.000 0.00 0.00 0.00 3.08
111 112 6.370718 GTGTCGGTGAAGATTTACATTAGGTT 59.629 38.462 0.00 0.00 0.00 3.50
112 113 6.938030 TGTCGGTGAAGATTTACATTAGGTTT 59.062 34.615 0.00 0.00 0.00 3.27
113 114 7.446013 TGTCGGTGAAGATTTACATTAGGTTTT 59.554 33.333 0.00 0.00 0.00 2.43
114 115 7.961283 GTCGGTGAAGATTTACATTAGGTTTTC 59.039 37.037 0.00 0.00 0.00 2.29
115 116 7.662258 TCGGTGAAGATTTACATTAGGTTTTCA 59.338 33.333 0.00 0.00 0.00 2.69
116 117 7.749126 CGGTGAAGATTTACATTAGGTTTTCAC 59.251 37.037 5.27 5.27 40.46 3.18
117 118 7.749126 GGTGAAGATTTACATTAGGTTTTCACG 59.251 37.037 7.25 0.00 41.48 4.35
118 119 8.287503 GTGAAGATTTACATTAGGTTTTCACGT 58.712 33.333 0.00 0.00 34.59 4.49
119 120 8.842280 TGAAGATTTACATTAGGTTTTCACGTT 58.158 29.630 0.00 0.00 0.00 3.99
120 121 9.113876 GAAGATTTACATTAGGTTTTCACGTTG 57.886 33.333 0.00 0.00 0.00 4.10
121 122 7.081976 AGATTTACATTAGGTTTTCACGTTGC 58.918 34.615 0.00 0.00 0.00 4.17
122 123 5.752892 TTACATTAGGTTTTCACGTTGCA 57.247 34.783 0.00 0.00 0.00 4.08
123 124 4.846779 ACATTAGGTTTTCACGTTGCAT 57.153 36.364 0.00 0.00 0.00 3.96
124 125 4.545610 ACATTAGGTTTTCACGTTGCATG 58.454 39.130 0.00 0.00 0.00 4.06
125 126 4.037446 ACATTAGGTTTTCACGTTGCATGT 59.963 37.500 0.00 0.00 0.00 3.21
126 127 5.239744 ACATTAGGTTTTCACGTTGCATGTA 59.760 36.000 0.00 0.00 0.00 2.29
127 128 5.752892 TTAGGTTTTCACGTTGCATGTAA 57.247 34.783 0.00 0.00 0.00 2.41
128 129 4.846779 AGGTTTTCACGTTGCATGTAAT 57.153 36.364 0.00 0.00 0.00 1.89
146 147 8.859236 CATGTAATGTATGGATCTGAGGATTT 57.141 34.615 0.00 0.00 40.20 2.17
147 148 8.727910 CATGTAATGTATGGATCTGAGGATTTG 58.272 37.037 0.00 0.00 40.20 2.32
148 149 7.805163 TGTAATGTATGGATCTGAGGATTTGT 58.195 34.615 0.00 0.00 31.46 2.83
149 150 8.933653 TGTAATGTATGGATCTGAGGATTTGTA 58.066 33.333 0.00 0.00 31.46 2.41
150 151 9.778741 GTAATGTATGGATCTGAGGATTTGTAA 57.221 33.333 0.00 0.00 31.46 2.41
152 153 8.859236 ATGTATGGATCTGAGGATTTGTAATG 57.141 34.615 0.00 0.00 31.46 1.90
153 154 7.226441 TGTATGGATCTGAGGATTTGTAATGG 58.774 38.462 0.00 0.00 31.46 3.16
154 155 5.974156 TGGATCTGAGGATTTGTAATGGA 57.026 39.130 0.00 0.00 31.46 3.41
155 156 5.933617 TGGATCTGAGGATTTGTAATGGAG 58.066 41.667 0.00 0.00 31.46 3.86
156 157 5.163163 TGGATCTGAGGATTTGTAATGGAGG 60.163 44.000 0.00 0.00 31.46 4.30
157 158 5.163152 GGATCTGAGGATTTGTAATGGAGGT 60.163 44.000 0.00 0.00 31.46 3.85
158 159 6.043243 GGATCTGAGGATTTGTAATGGAGGTA 59.957 42.308 0.00 0.00 31.46 3.08
159 160 7.256835 GGATCTGAGGATTTGTAATGGAGGTAT 60.257 40.741 0.00 0.00 31.46 2.73
160 161 7.067496 TCTGAGGATTTGTAATGGAGGTATC 57.933 40.000 0.00 0.00 0.00 2.24
161 162 6.043243 TCTGAGGATTTGTAATGGAGGTATCC 59.957 42.308 0.00 0.00 46.87 2.59
173 174 4.611310 GGAGGTATCCGCTTGTTAAAAC 57.389 45.455 0.00 0.00 35.37 2.43
174 175 3.063045 GGAGGTATCCGCTTGTTAAAACG 59.937 47.826 0.00 0.00 35.37 3.60
175 176 3.928375 GAGGTATCCGCTTGTTAAAACGA 59.072 43.478 0.00 0.00 0.00 3.85
176 177 4.317488 AGGTATCCGCTTGTTAAAACGAA 58.683 39.130 0.00 0.00 0.00 3.85
177 178 4.756135 AGGTATCCGCTTGTTAAAACGAAA 59.244 37.500 0.00 0.00 0.00 3.46
178 179 5.239087 AGGTATCCGCTTGTTAAAACGAAAA 59.761 36.000 0.00 0.00 0.00 2.29
179 180 6.072342 AGGTATCCGCTTGTTAAAACGAAAAT 60.072 34.615 0.00 0.00 0.00 1.82
180 181 7.119553 AGGTATCCGCTTGTTAAAACGAAAATA 59.880 33.333 0.00 0.00 0.00 1.40
181 182 7.911727 GGTATCCGCTTGTTAAAACGAAAATAT 59.088 33.333 0.00 0.00 0.00 1.28
182 183 9.281075 GTATCCGCTTGTTAAAACGAAAATATT 57.719 29.630 0.00 0.00 0.00 1.28
183 184 7.555639 TCCGCTTGTTAAAACGAAAATATTG 57.444 32.000 0.00 0.00 0.00 1.90
184 185 7.361127 TCCGCTTGTTAAAACGAAAATATTGA 58.639 30.769 0.00 0.00 0.00 2.57
185 186 7.535940 TCCGCTTGTTAAAACGAAAATATTGAG 59.464 33.333 0.00 0.00 0.00 3.02
186 187 7.201316 CCGCTTGTTAAAACGAAAATATTGAGG 60.201 37.037 0.00 0.00 0.00 3.86
187 188 7.325097 CGCTTGTTAAAACGAAAATATTGAGGT 59.675 33.333 0.00 0.00 0.00 3.85
188 189 8.424731 GCTTGTTAAAACGAAAATATTGAGGTG 58.575 33.333 0.00 0.00 0.00 4.00
189 190 9.458374 CTTGTTAAAACGAAAATATTGAGGTGT 57.542 29.630 0.00 0.00 0.00 4.16
190 191 8.789881 TGTTAAAACGAAAATATTGAGGTGTG 57.210 30.769 0.00 0.00 0.00 3.82
191 192 8.622157 TGTTAAAACGAAAATATTGAGGTGTGA 58.378 29.630 0.00 0.00 0.00 3.58
192 193 8.898792 GTTAAAACGAAAATATTGAGGTGTGAC 58.101 33.333 0.00 0.00 0.00 3.67
193 194 5.622770 AACGAAAATATTGAGGTGTGACC 57.377 39.130 0.00 0.00 38.99 4.02
194 195 3.682858 ACGAAAATATTGAGGTGTGACCG 59.317 43.478 0.00 0.00 44.90 4.79
195 196 3.930229 CGAAAATATTGAGGTGTGACCGA 59.070 43.478 0.00 0.00 44.90 4.69
196 197 4.201685 CGAAAATATTGAGGTGTGACCGAC 60.202 45.833 0.00 0.00 44.90 4.79
197 198 2.981859 ATATTGAGGTGTGACCGACC 57.018 50.000 0.00 0.00 44.90 4.79
198 199 1.634960 TATTGAGGTGTGACCGACCA 58.365 50.000 0.00 0.00 44.90 4.02
199 200 0.984230 ATTGAGGTGTGACCGACCAT 59.016 50.000 0.00 0.00 44.90 3.55
200 201 0.762418 TTGAGGTGTGACCGACCATT 59.238 50.000 0.00 0.00 44.90 3.16
201 202 0.034756 TGAGGTGTGACCGACCATTG 59.965 55.000 0.00 0.00 44.90 2.82
202 203 0.034896 GAGGTGTGACCGACCATTGT 59.965 55.000 0.00 0.00 44.90 2.71
203 204 0.034896 AGGTGTGACCGACCATTGTC 59.965 55.000 0.00 0.00 44.90 3.18
204 205 0.953960 GGTGTGACCGACCATTGTCC 60.954 60.000 0.00 0.00 38.32 4.02
205 206 0.250124 GTGTGACCGACCATTGTCCA 60.250 55.000 0.00 0.00 38.32 4.02
206 207 0.250124 TGTGACCGACCATTGTCCAC 60.250 55.000 0.00 0.00 38.32 4.02
207 208 1.005512 TGACCGACCATTGTCCACG 60.006 57.895 0.00 0.00 38.32 4.94
209 210 2.162338 GACCGACCATTGTCCACGGA 62.162 60.000 0.00 0.00 45.31 4.69
210 211 1.740296 CCGACCATTGTCCACGGAC 60.740 63.158 9.38 9.38 45.31 4.79
228 229 3.490759 GCGTCTGGTGCGTCCATG 61.491 66.667 0.94 0.00 46.12 3.66
229 230 2.815211 CGTCTGGTGCGTCCATGG 60.815 66.667 4.97 4.97 46.12 3.66
230 231 2.662596 GTCTGGTGCGTCCATGGA 59.337 61.111 11.44 11.44 46.12 3.41
231 232 1.741770 GTCTGGTGCGTCCATGGAC 60.742 63.158 31.59 31.59 46.12 4.02
251 252 0.687427 ATTTGAGGGGCCGGATTTGG 60.687 55.000 5.05 0.00 0.00 3.28
256 257 1.000646 GGGGCCGGATTTGGTGTAA 60.001 57.895 5.05 0.00 0.00 2.41
261 262 0.675522 CCGGATTTGGTGTAAGCGGT 60.676 55.000 0.00 0.00 36.92 5.68
273 274 2.232696 TGTAAGCGGTTGTAGATGCTCA 59.767 45.455 10.73 0.00 36.49 4.26
276 277 3.377346 AGCGGTTGTAGATGCTCATAG 57.623 47.619 0.00 0.00 30.37 2.23
285 286 3.623906 AGATGCTCATAGTGTGTGCTT 57.376 42.857 13.90 8.42 45.25 3.91
286 287 3.529533 AGATGCTCATAGTGTGTGCTTC 58.470 45.455 16.80 16.80 45.25 3.86
287 288 2.837532 TGCTCATAGTGTGTGCTTCA 57.162 45.000 13.90 0.00 45.25 3.02
292 293 4.449131 CTCATAGTGTGTGCTTCATCCAT 58.551 43.478 0.00 0.00 0.00 3.41
295 296 5.711506 TCATAGTGTGTGCTTCATCCATTTT 59.288 36.000 0.00 0.00 0.00 1.82
344 351 9.575783 TTTGTCCACTTATTTACAAAGTTTGAC 57.424 29.630 22.23 5.76 37.02 3.18
345 352 8.514330 TGTCCACTTATTTACAAAGTTTGACT 57.486 30.769 22.23 3.29 37.21 3.41
395 402 6.355405 GCATTCACAAGACGAAATCAATATCG 59.645 38.462 0.00 0.00 44.33 2.92
599 607 5.187772 AGCTACTCCATCATGTAGTGAACAA 59.812 40.000 0.00 0.00 42.70 2.83
643 3165 4.519906 TCAGAATAGGGCCCCTAAAAAG 57.480 45.455 21.43 5.01 39.77 2.27
645 3167 4.542525 TCAGAATAGGGCCCCTAAAAAGAA 59.457 41.667 21.43 0.00 39.77 2.52
646 3168 4.889995 CAGAATAGGGCCCCTAAAAAGAAG 59.110 45.833 21.43 0.00 39.77 2.85
647 3169 3.973472 ATAGGGCCCCTAAAAAGAAGG 57.027 47.619 21.43 0.00 39.77 3.46
648 3170 1.768265 AGGGCCCCTAAAAAGAAGGA 58.232 50.000 21.43 0.00 36.08 3.36
649 3171 2.078611 AGGGCCCCTAAAAAGAAGGAA 58.921 47.619 21.43 0.00 36.08 3.36
650 3172 2.660038 AGGGCCCCTAAAAAGAAGGAAT 59.340 45.455 21.43 0.00 36.08 3.01
651 3173 3.079072 AGGGCCCCTAAAAAGAAGGAATT 59.921 43.478 21.43 0.00 36.08 2.17
652 3174 3.451178 GGGCCCCTAAAAAGAAGGAATTC 59.549 47.826 12.23 0.00 36.08 2.17
660 3182 7.839200 CCCTAAAAAGAAGGAATTCAATAGGGA 59.161 37.037 17.34 0.00 40.15 4.20
661 3183 8.907885 CCTAAAAAGAAGGAATTCAATAGGGAG 58.092 37.037 7.93 0.00 36.08 4.30
662 3184 9.467796 CTAAAAAGAAGGAATTCAATAGGGAGT 57.532 33.333 7.93 0.00 0.00 3.85
664 3186 9.997172 AAAAAGAAGGAATTCAATAGGGAGTAT 57.003 29.630 7.93 0.00 0.00 2.12
731 3253 1.376037 GAGGGAGGGACACGCAAAG 60.376 63.158 0.00 0.00 33.82 2.77
732 3254 2.113243 GAGGGAGGGACACGCAAAGT 62.113 60.000 0.00 0.00 33.82 2.66
733 3255 1.228154 GGGAGGGACACGCAAAGTT 60.228 57.895 0.00 0.00 0.00 2.66
736 3258 1.594331 GAGGGACACGCAAAGTTTCT 58.406 50.000 0.00 0.00 30.59 2.52
737 3259 2.549349 GGAGGGACACGCAAAGTTTCTA 60.549 50.000 0.00 0.00 30.59 2.10
738 3260 3.335579 GAGGGACACGCAAAGTTTCTAT 58.664 45.455 0.00 0.00 30.59 1.98
739 3261 3.751518 AGGGACACGCAAAGTTTCTATT 58.248 40.909 0.00 0.00 30.59 1.73
740 3262 3.751698 AGGGACACGCAAAGTTTCTATTC 59.248 43.478 0.00 0.00 30.59 1.75
741 3263 3.119955 GGGACACGCAAAGTTTCTATTCC 60.120 47.826 0.00 0.00 30.59 3.01
742 3264 3.751698 GGACACGCAAAGTTTCTATTCCT 59.248 43.478 0.00 0.00 30.59 3.36
743 3265 4.933400 GGACACGCAAAGTTTCTATTCCTA 59.067 41.667 0.00 0.00 30.59 2.94
745 3267 6.072893 GGACACGCAAAGTTTCTATTCCTAAA 60.073 38.462 0.00 0.00 30.59 1.85
746 3268 7.266922 ACACGCAAAGTTTCTATTCCTAAAA 57.733 32.000 0.00 0.00 0.00 1.52
747 3269 7.882179 ACACGCAAAGTTTCTATTCCTAAAAT 58.118 30.769 0.00 0.00 0.00 1.82
748 3270 9.005777 ACACGCAAAGTTTCTATTCCTAAAATA 57.994 29.630 0.00 0.00 0.00 1.40
749 3271 9.274065 CACGCAAAGTTTCTATTCCTAAAATAC 57.726 33.333 0.00 0.00 0.00 1.89
750 3272 8.456471 ACGCAAAGTTTCTATTCCTAAAATACC 58.544 33.333 0.00 0.00 0.00 2.73
751 3273 7.913821 CGCAAAGTTTCTATTCCTAAAATACCC 59.086 37.037 0.00 0.00 0.00 3.69
752 3274 8.195436 GCAAAGTTTCTATTCCTAAAATACCCC 58.805 37.037 0.00 0.00 0.00 4.95
753 3275 8.692710 CAAAGTTTCTATTCCTAAAATACCCCC 58.307 37.037 0.00 0.00 0.00 5.40
754 3276 7.533923 AGTTTCTATTCCTAAAATACCCCCA 57.466 36.000 0.00 0.00 0.00 4.96
755 3277 7.946381 AGTTTCTATTCCTAAAATACCCCCAA 58.054 34.615 0.00 0.00 0.00 4.12
756 3278 7.837689 AGTTTCTATTCCTAAAATACCCCCAAC 59.162 37.037 0.00 0.00 0.00 3.77
757 3279 6.270219 TCTATTCCTAAAATACCCCCAACC 57.730 41.667 0.00 0.00 0.00 3.77
758 3280 4.976870 ATTCCTAAAATACCCCCAACCA 57.023 40.909 0.00 0.00 0.00 3.67
759 3281 4.761591 TTCCTAAAATACCCCCAACCAA 57.238 40.909 0.00 0.00 0.00 3.67
760 3282 4.761591 TCCTAAAATACCCCCAACCAAA 57.238 40.909 0.00 0.00 0.00 3.28
761 3283 5.292550 TCCTAAAATACCCCCAACCAAAT 57.707 39.130 0.00 0.00 0.00 2.32
762 3284 5.274015 TCCTAAAATACCCCCAACCAAATC 58.726 41.667 0.00 0.00 0.00 2.17
768 3498 2.043980 CCCCAACCAAATCCGTCGG 61.044 63.158 4.39 4.39 0.00 4.79
769 3499 2.043980 CCCAACCAAATCCGTCGGG 61.044 63.158 12.29 0.00 0.00 5.14
810 3540 1.814169 GGGGAAATCCGTCGAGCAC 60.814 63.158 0.00 0.00 36.71 4.40
1193 4125 1.203050 CCTTTTCTTGGCTTCTCCCCA 60.203 52.381 0.00 0.00 0.00 4.96
1206 4138 1.460689 TCCCCACCTCGGTTCTTGT 60.461 57.895 0.00 0.00 0.00 3.16
1358 4298 2.262637 ACCCCGTATTCCAGTTCTTGA 58.737 47.619 0.00 0.00 0.00 3.02
1387 4327 3.412386 GTGGTTCTTGATGTTGCTAGGT 58.588 45.455 0.00 0.00 0.00 3.08
1389 4329 3.327757 TGGTTCTTGATGTTGCTAGGTCT 59.672 43.478 0.00 0.00 0.00 3.85
1402 4342 4.250464 TGCTAGGTCTAACGGTTTGATTG 58.750 43.478 8.19 1.80 0.00 2.67
1403 4343 3.063588 GCTAGGTCTAACGGTTTGATTGC 59.936 47.826 8.19 7.03 0.00 3.56
1439 4380 8.408601 CAGGCTGTCTTGCTTTAATAATATTGT 58.591 33.333 6.28 0.00 0.00 2.71
1440 4381 8.971073 AGGCTGTCTTGCTTTAATAATATTGTT 58.029 29.630 2.82 2.82 0.00 2.83
1457 4398 8.816640 AATATTGTTTTCAGGAAATGTGTGAC 57.183 30.769 0.00 0.00 0.00 3.67
1465 4406 0.889186 GAAATGTGTGACCGCACCCT 60.889 55.000 10.72 0.00 44.51 4.34
1592 4840 7.062605 GGAAATTGTGCTAACTGAATGAACATG 59.937 37.037 0.00 0.00 0.00 3.21
1634 4882 5.320549 TCTGTAAGAAGTATGGTTCGTCC 57.679 43.478 0.00 0.00 42.31 4.79
1659 4907 2.171659 TGAGCCAAACTACCTGTGTTCA 59.828 45.455 0.00 0.00 0.00 3.18
1664 4912 4.700213 GCCAAACTACCTGTGTTCATACAT 59.300 41.667 0.00 0.00 36.50 2.29
1665 4913 5.878116 GCCAAACTACCTGTGTTCATACATA 59.122 40.000 0.00 0.00 36.50 2.29
1666 4914 6.183360 GCCAAACTACCTGTGTTCATACATAC 60.183 42.308 0.00 0.00 36.50 2.39
1667 4915 6.035650 CCAAACTACCTGTGTTCATACATACG 59.964 42.308 0.00 0.00 36.50 3.06
1686 4934 1.322442 GGTTCCTGCTCAGTGCTTTT 58.678 50.000 0.00 0.00 43.37 2.27
1773 5021 8.124823 CGTAATCACTTCATTTGTTGCATAGAT 58.875 33.333 0.00 0.00 0.00 1.98
1785 5033 4.159506 TGTTGCATAGATTTTGTTAGCCCC 59.840 41.667 0.00 0.00 0.00 5.80
1786 5034 3.974719 TGCATAGATTTTGTTAGCCCCA 58.025 40.909 0.00 0.00 0.00 4.96
1789 5037 5.068987 TGCATAGATTTTGTTAGCCCCATTC 59.931 40.000 0.00 0.00 0.00 2.67
1790 5038 5.068987 GCATAGATTTTGTTAGCCCCATTCA 59.931 40.000 0.00 0.00 0.00 2.57
1791 5039 6.736794 GCATAGATTTTGTTAGCCCCATTCAG 60.737 42.308 0.00 0.00 0.00 3.02
1792 5040 4.677182 AGATTTTGTTAGCCCCATTCAGT 58.323 39.130 0.00 0.00 0.00 3.41
1793 5041 4.463891 AGATTTTGTTAGCCCCATTCAGTG 59.536 41.667 0.00 0.00 0.00 3.66
1794 5042 2.969821 TTGTTAGCCCCATTCAGTGT 57.030 45.000 0.00 0.00 0.00 3.55
1795 5043 2.969821 TGTTAGCCCCATTCAGTGTT 57.030 45.000 0.00 0.00 0.00 3.32
1796 5044 2.790433 TGTTAGCCCCATTCAGTGTTC 58.210 47.619 0.00 0.00 0.00 3.18
1803 5051 2.742053 CCCCATTCAGTGTTCTGTAACG 59.258 50.000 0.00 0.00 41.91 3.18
1935 5183 4.703575 TGATCATAGGGTACTACGCATACC 59.296 45.833 6.08 2.47 41.32 2.73
1949 5197 6.821665 ACTACGCATACCAGTGTTTATTTGAT 59.178 34.615 0.00 0.00 33.64 2.57
1994 5242 6.716898 AGCTAGTTCGGTACATTTGTTTAC 57.283 37.500 0.00 0.00 0.00 2.01
2028 5276 2.857186 TCATGTCCTGCAAGTTGCTA 57.143 45.000 27.17 13.47 45.31 3.49
2040 5288 8.313292 TCCTGCAAGTTGCTATTCATAAATTTT 58.687 29.630 27.17 0.00 45.31 1.82
2076 5326 7.167468 CACAAAAAGGTAGAGCATACAAACAAC 59.833 37.037 2.07 0.00 0.00 3.32
2090 5340 7.009357 GCATACAAACAACTGAAACGGTAAAAA 59.991 33.333 0.00 0.00 0.00 1.94
2132 5382 3.928005 AGCATCTCAGGACATTGTGAT 57.072 42.857 0.00 0.00 33.01 3.06
2137 5387 6.832384 AGCATCTCAGGACATTGTGATTTTAT 59.168 34.615 0.00 0.00 31.04 1.40
2232 5486 6.719370 TCCACACTTCTATGGCTTTAAAATGT 59.281 34.615 0.00 0.00 35.81 2.71
2262 5516 9.620259 ATTTCCTTCTAGGTCTCATTGTTATTC 57.380 33.333 0.00 0.00 36.53 1.75
2275 5529 9.541143 TCTCATTGTTATTCGTATTATCAGCAA 57.459 29.630 0.00 0.00 0.00 3.91
2315 5982 4.652421 TGGAAAGGTTATCCTACATAGCGT 59.348 41.667 0.00 0.00 44.35 5.07
2349 6016 3.487574 GCACTTGATCCGTCGAATAAGAG 59.512 47.826 0.00 0.00 0.00 2.85
2387 6054 1.001633 ACATACGGTTGCGAAGGAGTT 59.998 47.619 0.00 0.00 0.00 3.01
2427 6103 6.832520 TTGGTAGCTCAGAAAATTGCATTA 57.167 33.333 0.00 0.00 0.00 1.90
2498 6175 5.585844 CCCTTCATTTTAAACATGGATTGGC 59.414 40.000 0.00 0.00 0.00 4.52
2537 6214 6.253298 CGCACTGGTGGTATTTTTATTTGATG 59.747 38.462 2.84 0.00 0.00 3.07
2564 6241 7.395190 TTTTCTGCATACATTGATAGTTGCT 57.605 32.000 0.00 0.00 0.00 3.91
2565 6242 5.996669 TCTGCATACATTGATAGTTGCTG 57.003 39.130 0.00 0.00 0.00 4.41
2571 6431 7.283807 TGCATACATTGATAGTTGCTGATTCTT 59.716 33.333 0.00 0.00 0.00 2.52
2586 6446 6.992715 TGCTGATTCTTCTTAGTAAATAGCCC 59.007 38.462 0.00 0.00 0.00 5.19
2638 6498 5.466819 TGATGTTCTGTGTAAACTCCTACG 58.533 41.667 0.00 0.00 0.00 3.51
2644 6504 5.255687 TCTGTGTAAACTCCTACGGTATCA 58.744 41.667 0.00 0.00 0.00 2.15
2695 6555 8.694540 CCTTGGATCATAAATTAAACCATGACA 58.305 33.333 0.00 0.00 30.64 3.58
2760 6620 6.732896 ACTAGATGGTGTAATGGTCCTTAG 57.267 41.667 0.00 0.00 0.00 2.18
2780 6640 4.301072 AGCTTTGTGCATAACTTCCCTA 57.699 40.909 0.00 0.00 45.94 3.53
2785 6645 6.531594 GCTTTGTGCATAACTTCCCTAAATTC 59.468 38.462 0.00 0.00 42.31 2.17
2790 6650 7.029563 GTGCATAACTTCCCTAAATTCACAAG 58.970 38.462 0.00 0.00 0.00 3.16
2939 6799 4.745351 AGAAGGGAAAGGAAAATGAAGCT 58.255 39.130 0.00 0.00 0.00 3.74
3076 6936 7.288810 TGCCACAGATTTTATTTGAAACTCT 57.711 32.000 0.00 0.00 0.00 3.24
3215 7075 2.429610 ACATCATGCTTGGATTGCTTCC 59.570 45.455 0.00 0.00 45.69 3.46
3550 7410 6.067263 TGTAGTGTAAACAAATTGGCTCAC 57.933 37.500 0.00 1.92 0.00 3.51
3611 7471 0.826715 CACTCCGAGGTGTCCATGAT 59.173 55.000 0.00 0.00 33.04 2.45
3791 7651 2.993471 GCAATTGGCGAGTGGTGGG 61.993 63.158 7.72 0.00 0.00 4.61
3829 7689 3.830178 CACATATGGGATGCATCAATGGT 59.170 43.478 27.25 17.75 0.00 3.55
4064 7924 6.825721 TCTGGAATAAGAATGAAAAGGAGCTC 59.174 38.462 4.71 4.71 0.00 4.09
4065 7925 5.888161 TGGAATAAGAATGAAAAGGAGCTCC 59.112 40.000 26.22 26.22 0.00 4.70
4090 7950 1.298859 GCCTGCGGGTTTGTACAGAG 61.299 60.000 14.55 0.00 34.45 3.35
4124 7984 0.101939 GGAAGTACCCGTCGATGGTC 59.898 60.000 22.05 12.19 37.31 4.02
4244 8104 7.600960 TGATTGCTTGTTTATGCTGTTGATAA 58.399 30.769 0.00 0.00 0.00 1.75
4245 8105 7.541783 TGATTGCTTGTTTATGCTGTTGATAAC 59.458 33.333 0.00 0.00 0.00 1.89
4246 8106 5.389778 TGCTTGTTTATGCTGTTGATAACG 58.610 37.500 0.00 0.00 0.00 3.18
4331 8193 4.622695 GCAGCAGATGAGACTCTAAGGTTT 60.623 45.833 3.68 0.00 0.00 3.27
4373 8235 2.965716 AAGCACCGAAACCTGCAGCT 62.966 55.000 8.66 0.00 35.73 4.24
4475 8337 7.201626 CGCCGTATATACTAGTATGAAGAAGCT 60.202 40.741 23.09 0.00 0.00 3.74
4614 8491 1.132453 GCGATTTAGACAAAGCCACCC 59.868 52.381 0.00 0.00 0.00 4.61
4636 8513 1.474478 GAGAATCACTCTCCTGACGCA 59.526 52.381 0.00 0.00 44.39 5.24
4653 8530 4.094294 TGACGCAAGATTACCTGCAAATAC 59.906 41.667 0.00 0.00 43.62 1.89
4742 8630 7.159372 GTCCTAGTGTTATTTTCTCACCTTCA 58.841 38.462 0.00 0.00 33.21 3.02
4743 8631 7.117956 GTCCTAGTGTTATTTTCTCACCTTCAC 59.882 40.741 0.00 0.00 33.21 3.18
4801 8689 4.793071 TGTGATAGCATTCCGTTGTTTTG 58.207 39.130 0.00 0.00 0.00 2.44
4868 9131 9.048446 TGTGTTATAACTCTTTGTTTCTGTACC 57.952 33.333 16.33 0.00 39.89 3.34
4929 9192 8.182881 CACTGCTTAACTTAACTAGATCGTACT 58.817 37.037 0.00 0.00 0.00 2.73
4930 9193 8.397148 ACTGCTTAACTTAACTAGATCGTACTC 58.603 37.037 0.00 0.00 0.00 2.59
4931 9194 7.701445 TGCTTAACTTAACTAGATCGTACTCC 58.299 38.462 0.00 0.00 0.00 3.85
4932 9195 7.138081 GCTTAACTTAACTAGATCGTACTCCC 58.862 42.308 0.00 0.00 0.00 4.30
4933 9196 7.013178 GCTTAACTTAACTAGATCGTACTCCCT 59.987 40.741 0.00 0.00 0.00 4.20
4934 9197 8.814038 TTAACTTAACTAGATCGTACTCCCTT 57.186 34.615 0.00 0.00 0.00 3.95
4935 9198 6.940831 ACTTAACTAGATCGTACTCCCTTC 57.059 41.667 0.00 0.00 0.00 3.46
4936 9199 5.526846 ACTTAACTAGATCGTACTCCCTTCG 59.473 44.000 0.00 0.00 0.00 3.79
4937 9200 3.557228 ACTAGATCGTACTCCCTTCGT 57.443 47.619 0.00 0.00 0.00 3.85
4938 9201 3.465871 ACTAGATCGTACTCCCTTCGTC 58.534 50.000 0.00 0.00 0.00 4.20
4939 9202 1.677942 AGATCGTACTCCCTTCGTCC 58.322 55.000 0.00 0.00 0.00 4.79
4940 9203 1.212441 AGATCGTACTCCCTTCGTCCT 59.788 52.381 0.00 0.00 0.00 3.85
4941 9204 2.437281 AGATCGTACTCCCTTCGTCCTA 59.563 50.000 0.00 0.00 0.00 2.94
4942 9205 3.072768 AGATCGTACTCCCTTCGTCCTAT 59.927 47.826 0.00 0.00 0.00 2.57
4943 9206 4.285517 AGATCGTACTCCCTTCGTCCTATA 59.714 45.833 0.00 0.00 0.00 1.31
4944 9207 4.422073 TCGTACTCCCTTCGTCCTATAA 57.578 45.455 0.00 0.00 0.00 0.98
4945 9208 4.978099 TCGTACTCCCTTCGTCCTATAAT 58.022 43.478 0.00 0.00 0.00 1.28
4946 9209 6.114187 TCGTACTCCCTTCGTCCTATAATA 57.886 41.667 0.00 0.00 0.00 0.98
4947 9210 6.715280 TCGTACTCCCTTCGTCCTATAATAT 58.285 40.000 0.00 0.00 0.00 1.28
4948 9211 7.851228 TCGTACTCCCTTCGTCCTATAATATA 58.149 38.462 0.00 0.00 0.00 0.86
4949 9212 8.321353 TCGTACTCCCTTCGTCCTATAATATAA 58.679 37.037 0.00 0.00 0.00 0.98
4950 9213 8.610896 CGTACTCCCTTCGTCCTATAATATAAG 58.389 40.741 0.00 0.00 0.00 1.73
4951 9214 9.678260 GTACTCCCTTCGTCCTATAATATAAGA 57.322 37.037 0.00 0.00 0.00 2.10
4953 9216 9.022884 ACTCCCTTCGTCCTATAATATAAGAAC 57.977 37.037 0.00 0.00 0.00 3.01
4954 9217 8.048534 TCCCTTCGTCCTATAATATAAGAACG 57.951 38.462 0.00 0.00 0.00 3.95
4955 9218 7.667219 TCCCTTCGTCCTATAATATAAGAACGT 59.333 37.037 7.91 0.00 0.00 3.99
4956 9219 8.302438 CCCTTCGTCCTATAATATAAGAACGTT 58.698 37.037 0.00 0.00 0.00 3.99
4957 9220 9.688592 CCTTCGTCCTATAATATAAGAACGTTT 57.311 33.333 0.46 0.00 0.00 3.60
4970 9233 9.924650 ATATAAGAACGTTTTTGACACTAGAGT 57.075 29.630 13.87 0.00 0.00 3.24
4972 9235 7.695869 AAGAACGTTTTTGACACTAGAGTAG 57.304 36.000 0.46 0.00 0.00 2.57
4973 9236 6.803642 AGAACGTTTTTGACACTAGAGTAGT 58.196 36.000 0.46 0.00 40.28 2.73
5015 9278 2.534042 TGGGACAGAGGGAGTAGAAG 57.466 55.000 0.00 0.00 0.00 2.85
5016 9279 2.000803 TGGGACAGAGGGAGTAGAAGA 58.999 52.381 0.00 0.00 0.00 2.87
5020 9283 4.325187 GGGACAGAGGGAGTAGAAGAGTAA 60.325 50.000 0.00 0.00 0.00 2.24
5070 9333 9.825109 AGTAAGTCCTATTTGAAGATAAGAAGC 57.175 33.333 0.00 0.00 0.00 3.86
5160 9423 7.819415 TGAAAATAGTGACATCTACACCTCAAG 59.181 37.037 0.00 0.00 38.82 3.02
5187 9452 6.403866 AAAACAGCAACATCTAAACCATGA 57.596 33.333 0.00 0.00 0.00 3.07
5190 9455 5.503927 ACAGCAACATCTAAACCATGATCT 58.496 37.500 0.00 0.00 0.00 2.75
5232 9497 2.496679 AGTAGTAGGGCCATGTGGAT 57.503 50.000 6.18 0.00 37.39 3.41
5234 9499 2.047061 GTAGTAGGGCCATGTGGATGA 58.953 52.381 6.18 0.00 37.39 2.92
5239 9504 1.144503 AGGGCCATGTGGATGAATCTC 59.855 52.381 6.18 0.00 37.39 2.75
5242 9507 1.607628 GCCATGTGGATGAATCTCAGC 59.392 52.381 2.55 0.00 37.39 4.26
5263 9528 5.586243 CAGCCCCACAATATATATTTCCTCG 59.414 44.000 5.18 0.00 0.00 4.63
5380 9647 4.884961 ACAGAGGGAGTACATTCCTACAT 58.115 43.478 0.00 0.00 37.40 2.29
5381 9648 4.651503 ACAGAGGGAGTACATTCCTACATG 59.348 45.833 0.00 0.00 37.40 3.21
5383 9650 2.706190 AGGGAGTACATTCCTACATGGC 59.294 50.000 0.00 0.00 37.40 4.40
5404 9671 1.084370 CGAGGACGAAATGGTGAGGC 61.084 60.000 0.00 0.00 42.66 4.70
5405 9672 0.036388 GAGGACGAAATGGTGAGGCA 60.036 55.000 0.00 0.00 0.00 4.75
5406 9673 0.321653 AGGACGAAATGGTGAGGCAC 60.322 55.000 0.00 0.00 0.00 5.01
5409 9676 0.108585 ACGAAATGGTGAGGCACAGT 59.891 50.000 0.00 0.00 35.86 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.619177 CGGTGAGGTAGAGTAGGACATG 59.381 54.545 0.00 0.00 0.00 3.21
8 9 2.508716 TCGGTGAGGTAGAGTAGGACAT 59.491 50.000 0.00 0.00 0.00 3.06
9 10 1.911357 TCGGTGAGGTAGAGTAGGACA 59.089 52.381 0.00 0.00 0.00 4.02
10 11 2.287769 GTCGGTGAGGTAGAGTAGGAC 58.712 57.143 0.00 0.00 0.00 3.85
11 12 1.134580 CGTCGGTGAGGTAGAGTAGGA 60.135 57.143 0.00 0.00 0.00 2.94
12 13 1.134580 TCGTCGGTGAGGTAGAGTAGG 60.135 57.143 0.00 0.00 0.00 3.18
13 14 1.932511 GTCGTCGGTGAGGTAGAGTAG 59.067 57.143 0.00 0.00 0.00 2.57
14 15 1.406069 GGTCGTCGGTGAGGTAGAGTA 60.406 57.143 0.00 0.00 0.00 2.59
15 16 0.676151 GGTCGTCGGTGAGGTAGAGT 60.676 60.000 0.00 0.00 0.00 3.24
16 17 0.675837 TGGTCGTCGGTGAGGTAGAG 60.676 60.000 0.00 0.00 0.00 2.43
17 18 0.957395 GTGGTCGTCGGTGAGGTAGA 60.957 60.000 0.00 0.00 0.00 2.59
18 19 1.239296 TGTGGTCGTCGGTGAGGTAG 61.239 60.000 0.00 0.00 0.00 3.18
19 20 0.822944 TTGTGGTCGTCGGTGAGGTA 60.823 55.000 0.00 0.00 0.00 3.08
20 21 2.129146 TTGTGGTCGTCGGTGAGGT 61.129 57.895 0.00 0.00 0.00 3.85
21 22 1.663702 GTTGTGGTCGTCGGTGAGG 60.664 63.158 0.00 0.00 0.00 3.86
22 23 0.249322 AAGTTGTGGTCGTCGGTGAG 60.249 55.000 0.00 0.00 0.00 3.51
23 24 0.249155 GAAGTTGTGGTCGTCGGTGA 60.249 55.000 0.00 0.00 0.00 4.02
24 25 1.219522 GGAAGTTGTGGTCGTCGGTG 61.220 60.000 0.00 0.00 0.00 4.94
25 26 1.068585 GGAAGTTGTGGTCGTCGGT 59.931 57.895 0.00 0.00 0.00 4.69
26 27 0.249741 AAGGAAGTTGTGGTCGTCGG 60.250 55.000 0.00 0.00 0.00 4.79
27 28 1.137513 GAAGGAAGTTGTGGTCGTCG 58.862 55.000 0.00 0.00 0.00 5.12
28 29 1.137513 CGAAGGAAGTTGTGGTCGTC 58.862 55.000 0.00 0.00 0.00 4.20
29 30 0.748450 TCGAAGGAAGTTGTGGTCGT 59.252 50.000 0.00 0.00 0.00 4.34
30 31 1.419374 CTCGAAGGAAGTTGTGGTCG 58.581 55.000 0.00 0.00 0.00 4.79
31 32 1.070289 ACCTCGAAGGAAGTTGTGGTC 59.930 52.381 7.76 0.00 37.67 4.02
32 33 1.129058 ACCTCGAAGGAAGTTGTGGT 58.871 50.000 7.76 0.00 37.67 4.16
33 34 1.512926 CACCTCGAAGGAAGTTGTGG 58.487 55.000 7.76 0.00 37.67 4.17
34 35 0.868406 GCACCTCGAAGGAAGTTGTG 59.132 55.000 7.76 0.00 37.67 3.33
35 36 0.759346 AGCACCTCGAAGGAAGTTGT 59.241 50.000 7.76 0.00 37.67 3.32
36 37 1.884235 AAGCACCTCGAAGGAAGTTG 58.116 50.000 7.76 0.00 37.67 3.16
37 38 2.613223 GCTAAGCACCTCGAAGGAAGTT 60.613 50.000 7.76 1.60 37.67 2.66
38 39 1.066787 GCTAAGCACCTCGAAGGAAGT 60.067 52.381 7.76 0.00 37.67 3.01
39 40 1.646189 GCTAAGCACCTCGAAGGAAG 58.354 55.000 7.76 2.15 37.67 3.46
40 41 0.249398 GGCTAAGCACCTCGAAGGAA 59.751 55.000 7.76 0.00 37.67 3.36
41 42 1.898154 GGCTAAGCACCTCGAAGGA 59.102 57.895 7.76 0.00 37.67 3.36
42 43 1.519455 CGGCTAAGCACCTCGAAGG 60.519 63.158 0.00 0.00 42.49 3.46
43 44 1.519455 CCGGCTAAGCACCTCGAAG 60.519 63.158 0.00 0.00 0.00 3.79
44 45 2.577059 CCGGCTAAGCACCTCGAA 59.423 61.111 0.00 0.00 0.00 3.71
45 46 4.143333 GCCGGCTAAGCACCTCGA 62.143 66.667 22.15 0.00 0.00 4.04
60 61 4.077184 TGTCCATGTCCGTCGGCC 62.077 66.667 6.34 0.00 0.00 6.13
61 62 2.813908 GTGTCCATGTCCGTCGGC 60.814 66.667 6.34 2.31 0.00 5.54
62 63 2.506217 CGTGTCCATGTCCGTCGG 60.506 66.667 4.39 4.39 0.00 4.79
63 64 1.800315 GTCGTGTCCATGTCCGTCG 60.800 63.158 0.00 0.00 0.00 5.12
64 65 1.445582 GGTCGTGTCCATGTCCGTC 60.446 63.158 0.00 0.00 0.00 4.79
65 66 1.541310 ATGGTCGTGTCCATGTCCGT 61.541 55.000 8.25 0.00 45.26 4.69
66 67 1.218047 ATGGTCGTGTCCATGTCCG 59.782 57.895 8.25 0.00 45.26 4.79
72 73 3.557220 ACACCATGGTCGTGTCCA 58.443 55.556 16.53 0.00 40.40 4.02
79 80 0.320374 TCTTCACCGACACCATGGTC 59.680 55.000 16.53 3.58 35.96 4.02
80 81 0.984230 ATCTTCACCGACACCATGGT 59.016 50.000 13.00 13.00 39.66 3.55
81 82 2.113860 AATCTTCACCGACACCATGG 57.886 50.000 11.19 11.19 0.00 3.66
82 83 4.000325 TGTAAATCTTCACCGACACCATG 59.000 43.478 0.00 0.00 0.00 3.66
83 84 4.280436 TGTAAATCTTCACCGACACCAT 57.720 40.909 0.00 0.00 0.00 3.55
84 85 3.755112 TGTAAATCTTCACCGACACCA 57.245 42.857 0.00 0.00 0.00 4.17
85 86 5.293569 CCTAATGTAAATCTTCACCGACACC 59.706 44.000 0.00 0.00 0.00 4.16
86 87 5.873164 ACCTAATGTAAATCTTCACCGACAC 59.127 40.000 0.00 0.00 0.00 3.67
87 88 6.045072 ACCTAATGTAAATCTTCACCGACA 57.955 37.500 0.00 0.00 0.00 4.35
88 89 6.980051 AACCTAATGTAAATCTTCACCGAC 57.020 37.500 0.00 0.00 0.00 4.79
89 90 7.662258 TGAAAACCTAATGTAAATCTTCACCGA 59.338 33.333 0.00 0.00 0.00 4.69
90 91 7.749126 GTGAAAACCTAATGTAAATCTTCACCG 59.251 37.037 0.00 0.00 35.99 4.94
91 92 7.749126 CGTGAAAACCTAATGTAAATCTTCACC 59.251 37.037 0.00 0.00 37.78 4.02
92 93 8.287503 ACGTGAAAACCTAATGTAAATCTTCAC 58.712 33.333 0.00 0.00 37.72 3.18
93 94 8.385898 ACGTGAAAACCTAATGTAAATCTTCA 57.614 30.769 0.00 0.00 0.00 3.02
94 95 9.113876 CAACGTGAAAACCTAATGTAAATCTTC 57.886 33.333 0.00 0.00 0.00 2.87
95 96 7.593644 GCAACGTGAAAACCTAATGTAAATCTT 59.406 33.333 0.00 0.00 0.00 2.40
96 97 7.081976 GCAACGTGAAAACCTAATGTAAATCT 58.918 34.615 0.00 0.00 0.00 2.40
97 98 6.858993 TGCAACGTGAAAACCTAATGTAAATC 59.141 34.615 0.00 0.00 0.00 2.17
98 99 6.740110 TGCAACGTGAAAACCTAATGTAAAT 58.260 32.000 0.00 0.00 0.00 1.40
99 100 6.132791 TGCAACGTGAAAACCTAATGTAAA 57.867 33.333 0.00 0.00 0.00 2.01
100 101 5.752892 TGCAACGTGAAAACCTAATGTAA 57.247 34.783 0.00 0.00 0.00 2.41
101 102 5.239744 ACATGCAACGTGAAAACCTAATGTA 59.760 36.000 0.00 0.00 0.00 2.29
102 103 4.037446 ACATGCAACGTGAAAACCTAATGT 59.963 37.500 0.00 0.00 0.00 2.71
103 104 4.545610 ACATGCAACGTGAAAACCTAATG 58.454 39.130 0.00 0.00 0.00 1.90
104 105 4.846779 ACATGCAACGTGAAAACCTAAT 57.153 36.364 0.00 0.00 0.00 1.73
105 106 5.752892 TTACATGCAACGTGAAAACCTAA 57.247 34.783 0.00 0.00 0.00 2.69
106 107 5.239744 ACATTACATGCAACGTGAAAACCTA 59.760 36.000 0.00 0.00 0.00 3.08
107 108 4.037446 ACATTACATGCAACGTGAAAACCT 59.963 37.500 0.00 0.00 0.00 3.50
108 109 4.295051 ACATTACATGCAACGTGAAAACC 58.705 39.130 0.00 0.00 0.00 3.27
109 110 6.033407 CCATACATTACATGCAACGTGAAAAC 59.967 38.462 0.00 0.00 0.00 2.43
110 111 6.072452 TCCATACATTACATGCAACGTGAAAA 60.072 34.615 0.00 0.00 0.00 2.29
111 112 5.412904 TCCATACATTACATGCAACGTGAAA 59.587 36.000 0.00 0.00 0.00 2.69
112 113 4.938226 TCCATACATTACATGCAACGTGAA 59.062 37.500 0.00 0.00 0.00 3.18
113 114 4.508662 TCCATACATTACATGCAACGTGA 58.491 39.130 0.00 0.00 0.00 4.35
114 115 4.873768 TCCATACATTACATGCAACGTG 57.126 40.909 0.00 0.00 0.00 4.49
115 116 5.237127 CAGATCCATACATTACATGCAACGT 59.763 40.000 0.00 0.00 0.00 3.99
116 117 5.466393 TCAGATCCATACATTACATGCAACG 59.534 40.000 0.00 0.00 0.00 4.10
117 118 6.072838 CCTCAGATCCATACATTACATGCAAC 60.073 42.308 0.00 0.00 0.00 4.17
118 119 5.999600 CCTCAGATCCATACATTACATGCAA 59.000 40.000 0.00 0.00 0.00 4.08
119 120 5.307716 TCCTCAGATCCATACATTACATGCA 59.692 40.000 0.00 0.00 0.00 3.96
120 121 5.798132 TCCTCAGATCCATACATTACATGC 58.202 41.667 0.00 0.00 0.00 4.06
121 122 8.727910 CAAATCCTCAGATCCATACATTACATG 58.272 37.037 0.00 0.00 0.00 3.21
122 123 8.443176 ACAAATCCTCAGATCCATACATTACAT 58.557 33.333 0.00 0.00 0.00 2.29
123 124 7.805163 ACAAATCCTCAGATCCATACATTACA 58.195 34.615 0.00 0.00 0.00 2.41
124 125 9.778741 TTACAAATCCTCAGATCCATACATTAC 57.221 33.333 0.00 0.00 0.00 1.89
126 127 9.293404 CATTACAAATCCTCAGATCCATACATT 57.707 33.333 0.00 0.00 0.00 2.71
127 128 7.886970 CCATTACAAATCCTCAGATCCATACAT 59.113 37.037 0.00 0.00 0.00 2.29
128 129 7.072328 TCCATTACAAATCCTCAGATCCATACA 59.928 37.037 0.00 0.00 0.00 2.29
129 130 7.453393 TCCATTACAAATCCTCAGATCCATAC 58.547 38.462 0.00 0.00 0.00 2.39
130 131 7.256799 CCTCCATTACAAATCCTCAGATCCATA 60.257 40.741 0.00 0.00 0.00 2.74
131 132 6.466904 CCTCCATTACAAATCCTCAGATCCAT 60.467 42.308 0.00 0.00 0.00 3.41
132 133 5.163163 CCTCCATTACAAATCCTCAGATCCA 60.163 44.000 0.00 0.00 0.00 3.41
133 134 5.163152 ACCTCCATTACAAATCCTCAGATCC 60.163 44.000 0.00 0.00 0.00 3.36
134 135 5.934781 ACCTCCATTACAAATCCTCAGATC 58.065 41.667 0.00 0.00 0.00 2.75
135 136 5.983333 ACCTCCATTACAAATCCTCAGAT 57.017 39.130 0.00 0.00 0.00 2.90
136 137 6.043243 GGATACCTCCATTACAAATCCTCAGA 59.957 42.308 0.00 0.00 41.64 3.27
137 138 6.234177 GGATACCTCCATTACAAATCCTCAG 58.766 44.000 0.00 0.00 41.64 3.35
138 139 5.221641 CGGATACCTCCATTACAAATCCTCA 60.222 44.000 0.00 0.00 42.19 3.86
139 140 5.238583 CGGATACCTCCATTACAAATCCTC 58.761 45.833 0.00 0.00 42.19 3.71
140 141 4.505039 GCGGATACCTCCATTACAAATCCT 60.505 45.833 0.00 0.00 42.19 3.24
141 142 3.751698 GCGGATACCTCCATTACAAATCC 59.248 47.826 0.00 0.00 42.19 3.01
142 143 4.642429 AGCGGATACCTCCATTACAAATC 58.358 43.478 0.00 0.00 42.19 2.17
143 144 4.706842 AGCGGATACCTCCATTACAAAT 57.293 40.909 0.00 0.00 42.19 2.32
144 145 4.196193 CAAGCGGATACCTCCATTACAAA 58.804 43.478 0.00 0.00 42.19 2.83
145 146 3.199071 ACAAGCGGATACCTCCATTACAA 59.801 43.478 0.00 0.00 42.19 2.41
146 147 2.769663 ACAAGCGGATACCTCCATTACA 59.230 45.455 0.00 0.00 42.19 2.41
147 148 3.470645 ACAAGCGGATACCTCCATTAC 57.529 47.619 0.00 0.00 42.19 1.89
148 149 5.617528 TTAACAAGCGGATACCTCCATTA 57.382 39.130 0.00 0.00 42.19 1.90
149 150 4.497291 TTAACAAGCGGATACCTCCATT 57.503 40.909 0.00 0.00 42.19 3.16
150 151 4.497291 TTTAACAAGCGGATACCTCCAT 57.503 40.909 0.00 0.00 42.19 3.41
151 152 3.985019 TTTAACAAGCGGATACCTCCA 57.015 42.857 0.00 0.00 42.19 3.86
152 153 3.063045 CGTTTTAACAAGCGGATACCTCC 59.937 47.826 0.00 0.00 38.29 4.30
153 154 3.928375 TCGTTTTAACAAGCGGATACCTC 59.072 43.478 0.00 0.00 37.24 3.85
154 155 3.929094 TCGTTTTAACAAGCGGATACCT 58.071 40.909 0.00 0.00 37.24 3.08
155 156 4.666928 TTCGTTTTAACAAGCGGATACC 57.333 40.909 0.00 0.00 37.24 2.73
156 157 8.831000 ATATTTTCGTTTTAACAAGCGGATAC 57.169 30.769 0.00 0.00 37.24 2.24
157 158 9.279904 CAATATTTTCGTTTTAACAAGCGGATA 57.720 29.630 0.00 0.00 37.24 2.59
158 159 8.024285 TCAATATTTTCGTTTTAACAAGCGGAT 58.976 29.630 0.00 0.00 37.24 4.18
159 160 7.361127 TCAATATTTTCGTTTTAACAAGCGGA 58.639 30.769 0.00 0.00 37.24 5.54
160 161 7.201316 CCTCAATATTTTCGTTTTAACAAGCGG 60.201 37.037 0.00 0.00 37.24 5.52
161 162 7.325097 ACCTCAATATTTTCGTTTTAACAAGCG 59.675 33.333 0.00 0.00 37.92 4.68
162 163 8.424731 CACCTCAATATTTTCGTTTTAACAAGC 58.575 33.333 0.00 0.00 0.00 4.01
163 164 9.458374 ACACCTCAATATTTTCGTTTTAACAAG 57.542 29.630 0.00 0.00 0.00 3.16
164 165 9.239002 CACACCTCAATATTTTCGTTTTAACAA 57.761 29.630 0.00 0.00 0.00 2.83
165 166 8.622157 TCACACCTCAATATTTTCGTTTTAACA 58.378 29.630 0.00 0.00 0.00 2.41
166 167 8.898792 GTCACACCTCAATATTTTCGTTTTAAC 58.101 33.333 0.00 0.00 0.00 2.01
167 168 8.077386 GGTCACACCTCAATATTTTCGTTTTAA 58.923 33.333 0.00 0.00 34.73 1.52
168 169 7.571613 CGGTCACACCTCAATATTTTCGTTTTA 60.572 37.037 0.00 0.00 35.66 1.52
169 170 6.443792 GGTCACACCTCAATATTTTCGTTTT 58.556 36.000 0.00 0.00 34.73 2.43
170 171 5.334569 CGGTCACACCTCAATATTTTCGTTT 60.335 40.000 0.00 0.00 35.66 3.60
171 172 4.153475 CGGTCACACCTCAATATTTTCGTT 59.847 41.667 0.00 0.00 35.66 3.85
172 173 3.682858 CGGTCACACCTCAATATTTTCGT 59.317 43.478 0.00 0.00 35.66 3.85
173 174 3.930229 TCGGTCACACCTCAATATTTTCG 59.070 43.478 0.00 0.00 35.66 3.46
174 175 4.094442 GGTCGGTCACACCTCAATATTTTC 59.906 45.833 0.00 0.00 35.66 2.29
175 176 4.007659 GGTCGGTCACACCTCAATATTTT 58.992 43.478 0.00 0.00 35.66 1.82
176 177 3.008594 TGGTCGGTCACACCTCAATATTT 59.991 43.478 0.00 0.00 35.66 1.40
177 178 2.569853 TGGTCGGTCACACCTCAATATT 59.430 45.455 0.00 0.00 35.66 1.28
178 179 2.184533 TGGTCGGTCACACCTCAATAT 58.815 47.619 0.00 0.00 35.66 1.28
179 180 1.634960 TGGTCGGTCACACCTCAATA 58.365 50.000 0.00 0.00 35.66 1.90
180 181 0.984230 ATGGTCGGTCACACCTCAAT 59.016 50.000 0.00 0.00 35.66 2.57
181 182 0.762418 AATGGTCGGTCACACCTCAA 59.238 50.000 0.00 0.00 35.66 3.02
182 183 0.034756 CAATGGTCGGTCACACCTCA 59.965 55.000 0.00 0.00 35.66 3.86
183 184 0.034896 ACAATGGTCGGTCACACCTC 59.965 55.000 0.00 0.00 35.66 3.85
184 185 0.034896 GACAATGGTCGGTCACACCT 59.965 55.000 0.00 0.00 35.66 4.00
185 186 0.953960 GGACAATGGTCGGTCACACC 60.954 60.000 0.00 0.00 45.28 4.16
186 187 0.250124 TGGACAATGGTCGGTCACAC 60.250 55.000 0.00 0.00 45.28 3.82
187 188 0.250124 GTGGACAATGGTCGGTCACA 60.250 55.000 3.89 0.00 45.28 3.58
188 189 1.289109 CGTGGACAATGGTCGGTCAC 61.289 60.000 0.00 0.00 45.28 3.67
189 190 1.005512 CGTGGACAATGGTCGGTCA 60.006 57.895 0.00 0.00 45.28 4.02
190 191 1.740296 CCGTGGACAATGGTCGGTC 60.740 63.158 0.00 0.00 45.28 4.79
191 192 2.211410 TCCGTGGACAATGGTCGGT 61.211 57.895 0.00 0.00 45.28 4.69
192 193 1.740296 GTCCGTGGACAATGGTCGG 60.740 63.158 14.10 0.00 45.28 4.79
193 194 2.092291 CGTCCGTGGACAATGGTCG 61.092 63.158 18.54 0.00 45.28 4.79
194 195 2.388232 GCGTCCGTGGACAATGGTC 61.388 63.158 18.54 0.00 44.77 4.02
195 196 2.358247 GCGTCCGTGGACAATGGT 60.358 61.111 18.54 0.00 44.77 3.55
196 197 3.487202 CGCGTCCGTGGACAATGG 61.487 66.667 18.54 3.84 44.77 3.16
222 223 1.767759 CCCCTCAAATGTCCATGGAC 58.232 55.000 33.97 33.97 44.77 4.02
223 224 0.033208 GCCCCTCAAATGTCCATGGA 60.033 55.000 11.44 11.44 0.00 3.41
224 225 1.044790 GGCCCCTCAAATGTCCATGG 61.045 60.000 4.97 4.97 0.00 3.66
225 226 1.386525 CGGCCCCTCAAATGTCCATG 61.387 60.000 0.00 0.00 0.00 3.66
226 227 1.076777 CGGCCCCTCAAATGTCCAT 60.077 57.895 0.00 0.00 0.00 3.41
227 228 2.354729 CGGCCCCTCAAATGTCCA 59.645 61.111 0.00 0.00 0.00 4.02
228 229 2.284515 ATCCGGCCCCTCAAATGTCC 62.285 60.000 0.00 0.00 0.00 4.02
229 230 0.395724 AATCCGGCCCCTCAAATGTC 60.396 55.000 0.00 0.00 0.00 3.06
230 231 0.041090 AAATCCGGCCCCTCAAATGT 59.959 50.000 0.00 0.00 0.00 2.71
231 232 0.461135 CAAATCCGGCCCCTCAAATG 59.539 55.000 0.00 0.00 0.00 2.32
251 252 2.603560 GAGCATCTACAACCGCTTACAC 59.396 50.000 0.00 0.00 34.12 2.90
256 257 2.695666 ACTATGAGCATCTACAACCGCT 59.304 45.455 0.00 0.00 37.44 5.52
261 262 4.081476 AGCACACACTATGAGCATCTACAA 60.081 41.667 0.00 0.00 46.44 2.41
273 274 6.594788 AAAAATGGATGAAGCACACACTAT 57.405 33.333 0.00 0.00 0.00 2.12
318 319 9.575783 GTCAAACTTTGTAAATAAGTGGACAAA 57.424 29.630 0.00 0.00 38.84 2.83
322 323 8.780249 GCTAGTCAAACTTTGTAAATAAGTGGA 58.220 33.333 1.44 0.00 36.06 4.02
323 324 8.784043 AGCTAGTCAAACTTTGTAAATAAGTGG 58.216 33.333 1.44 0.00 36.06 4.00
366 373 4.696877 TGATTTCGTCTTGTGAATGCTGAT 59.303 37.500 0.00 0.00 0.00 2.90
370 377 6.355405 CGATATTGATTTCGTCTTGTGAATGC 59.645 38.462 0.00 0.00 0.00 3.56
373 380 6.961359 ACGATATTGATTTCGTCTTGTGAA 57.039 33.333 4.08 0.00 44.72 3.18
475 482 7.136119 TCTAAGTCAAATTACGCAAAGTTTGG 58.864 34.615 17.11 9.63 33.55 3.28
546 554 5.008217 AGCTCAATTGCACGTACAAACTTAA 59.992 36.000 5.10 0.00 32.27 1.85
599 607 8.830201 TGAATTCAACCATTCGATTTTTCATT 57.170 26.923 5.45 0.00 36.13 2.57
609 617 5.506317 GCCCTATTCTGAATTCAACCATTCG 60.506 44.000 9.88 0.00 36.13 3.34
648 3170 9.824216 TGCTAGTACTATACTCCCTATTGAATT 57.176 33.333 2.33 0.00 40.14 2.17
649 3171 9.245481 GTGCTAGTACTATACTCCCTATTGAAT 57.755 37.037 2.33 0.00 40.14 2.57
650 3172 7.668886 GGTGCTAGTACTATACTCCCTATTGAA 59.331 40.741 10.95 0.00 40.14 2.69
651 3173 7.173722 GGTGCTAGTACTATACTCCCTATTGA 58.826 42.308 10.95 0.00 40.14 2.57
652 3174 6.093771 CGGTGCTAGTACTATACTCCCTATTG 59.906 46.154 10.95 0.00 40.14 1.90
660 3182 3.814283 GCTGACGGTGCTAGTACTATACT 59.186 47.826 10.95 0.00 42.68 2.12
661 3183 3.363772 CGCTGACGGTGCTAGTACTATAC 60.364 52.174 10.95 6.03 34.97 1.47
662 3184 2.804527 CGCTGACGGTGCTAGTACTATA 59.195 50.000 10.95 0.00 34.97 1.31
663 3185 1.602851 CGCTGACGGTGCTAGTACTAT 59.397 52.381 10.95 0.00 34.97 2.12
664 3186 1.012086 CGCTGACGGTGCTAGTACTA 58.988 55.000 10.95 1.89 34.97 1.82
731 3253 7.069085 GGTTGGGGGTATTTTAGGAATAGAAAC 59.931 40.741 0.00 0.00 0.00 2.78
732 3254 7.127405 GGTTGGGGGTATTTTAGGAATAGAAA 58.873 38.462 0.00 0.00 0.00 2.52
733 3255 6.219981 TGGTTGGGGGTATTTTAGGAATAGAA 59.780 38.462 0.00 0.00 0.00 2.10
736 3258 6.418964 TTGGTTGGGGGTATTTTAGGAATA 57.581 37.500 0.00 0.00 0.00 1.75
737 3259 4.976870 TGGTTGGGGGTATTTTAGGAAT 57.023 40.909 0.00 0.00 0.00 3.01
738 3260 4.761591 TTGGTTGGGGGTATTTTAGGAA 57.238 40.909 0.00 0.00 0.00 3.36
739 3261 4.761591 TTTGGTTGGGGGTATTTTAGGA 57.238 40.909 0.00 0.00 0.00 2.94
740 3262 4.407621 GGATTTGGTTGGGGGTATTTTAGG 59.592 45.833 0.00 0.00 0.00 2.69
741 3263 4.098807 CGGATTTGGTTGGGGGTATTTTAG 59.901 45.833 0.00 0.00 0.00 1.85
742 3264 4.024670 CGGATTTGGTTGGGGGTATTTTA 58.975 43.478 0.00 0.00 0.00 1.52
743 3265 2.835156 CGGATTTGGTTGGGGGTATTTT 59.165 45.455 0.00 0.00 0.00 1.82
745 3267 1.359818 ACGGATTTGGTTGGGGGTATT 59.640 47.619 0.00 0.00 0.00 1.89
746 3268 1.004436 ACGGATTTGGTTGGGGGTAT 58.996 50.000 0.00 0.00 0.00 2.73
747 3269 0.328926 GACGGATTTGGTTGGGGGTA 59.671 55.000 0.00 0.00 0.00 3.69
748 3270 1.076014 GACGGATTTGGTTGGGGGT 59.924 57.895 0.00 0.00 0.00 4.95
749 3271 2.043980 CGACGGATTTGGTTGGGGG 61.044 63.158 0.00 0.00 0.00 5.40
750 3272 2.043980 CCGACGGATTTGGTTGGGG 61.044 63.158 8.64 0.00 35.63 4.96
751 3273 3.585856 CCGACGGATTTGGTTGGG 58.414 61.111 8.64 0.00 35.63 4.12
752 3274 2.696759 GCCCGACGGATTTGGTTGG 61.697 63.158 17.49 0.00 38.47 3.77
753 3275 2.874751 GCCCGACGGATTTGGTTG 59.125 61.111 17.49 0.00 0.00 3.77
754 3276 2.744709 CGCCCGACGGATTTGGTT 60.745 61.111 17.49 0.00 38.44 3.67
810 3540 0.679960 GGAGGATTTGGGGTGTTCGG 60.680 60.000 0.00 0.00 0.00 4.30
978 3910 1.208293 GAAGAGGGACAGCGAGGAATT 59.792 52.381 0.00 0.00 0.00 2.17
1089 4021 2.890474 GGCATGTACGGCGTCCTG 60.890 66.667 19.21 13.85 0.00 3.86
1193 4125 1.619332 GAAGGAGACAAGAACCGAGGT 59.381 52.381 0.00 0.00 0.00 3.85
1206 4138 2.615493 GGGATTCAACAAGCGAAGGAGA 60.615 50.000 0.00 0.00 0.00 3.71
1358 4298 6.014327 AGCAACATCAAGAACCACCAAATAAT 60.014 34.615 0.00 0.00 0.00 1.28
1387 4327 1.810151 GCCAGCAATCAAACCGTTAGA 59.190 47.619 0.00 0.00 0.00 2.10
1389 4329 1.904287 AGCCAGCAATCAAACCGTTA 58.096 45.000 0.00 0.00 0.00 3.18
1439 4380 2.034053 GCGGTCACACATTTCCTGAAAA 59.966 45.455 0.00 0.00 33.56 2.29
1440 4381 1.606668 GCGGTCACACATTTCCTGAAA 59.393 47.619 0.00 0.00 34.46 2.69
1457 4398 1.367840 GTCCATAGCTAGGGTGCGG 59.632 63.158 23.08 5.23 38.13 5.69
1465 4406 3.552875 ACTGCTAACTCGTCCATAGCTA 58.447 45.455 0.00 0.00 41.97 3.32
1592 4840 2.631418 TGCAGCACTAGTAAGACGAC 57.369 50.000 0.00 0.00 0.00 4.34
1629 4877 2.341846 AGTTTGGCTCAAAAGGACGA 57.658 45.000 0.00 0.00 35.03 4.20
1634 4882 3.632145 ACACAGGTAGTTTGGCTCAAAAG 59.368 43.478 2.47 0.00 35.03 2.27
1659 4907 3.031736 ACTGAGCAGGAACCGTATGTAT 58.968 45.455 2.20 0.00 0.00 2.29
1664 4912 1.292223 GCACTGAGCAGGAACCGTA 59.708 57.895 2.20 0.00 44.79 4.02
1665 4913 2.031163 GCACTGAGCAGGAACCGT 59.969 61.111 2.20 0.00 44.79 4.83
1686 4934 7.040340 TGTTTCAACAAGTAGTCCTTTCAAACA 60.040 33.333 0.00 0.00 35.67 2.83
1700 4948 5.461737 CACAGTGTTTTGTGTTTCAACAAGT 59.538 36.000 0.00 0.00 42.68 3.16
1773 5021 3.571590 ACACTGAATGGGGCTAACAAAA 58.428 40.909 0.00 0.00 0.00 2.44
1785 5033 7.855409 TGAAAAATCGTTACAGAACACTGAATG 59.145 33.333 0.00 0.00 35.06 2.67
1786 5034 7.925993 TGAAAAATCGTTACAGAACACTGAAT 58.074 30.769 0.00 0.00 35.06 2.57
1789 5037 6.632834 CCTTGAAAAATCGTTACAGAACACTG 59.367 38.462 0.00 0.00 35.06 3.66
1790 5038 6.317893 ACCTTGAAAAATCGTTACAGAACACT 59.682 34.615 0.00 0.00 35.06 3.55
1791 5039 6.492254 ACCTTGAAAAATCGTTACAGAACAC 58.508 36.000 0.00 0.00 35.06 3.32
1792 5040 6.687081 ACCTTGAAAAATCGTTACAGAACA 57.313 33.333 0.00 0.00 35.06 3.18
1793 5041 7.980742 AAACCTTGAAAAATCGTTACAGAAC 57.019 32.000 0.00 0.00 0.00 3.01
1873 5121 7.589958 TTCAATAGGTTGTTGTTGGTAACAT 57.410 32.000 0.00 0.00 40.79 2.71
1910 5158 6.127423 GGTATGCGTAGTACCCTATGATCAAT 60.127 42.308 0.00 0.00 36.43 2.57
1918 5166 3.216800 CACTGGTATGCGTAGTACCCTA 58.783 50.000 9.50 0.00 40.72 3.53
1956 5204 5.934625 CGAACTAGCTATCTATGGCCAATTT 59.065 40.000 10.96 0.00 34.49 1.82
1958 5206 4.081420 CCGAACTAGCTATCTATGGCCAAT 60.081 45.833 10.96 0.29 34.49 3.16
1971 5219 6.225318 TGTAAACAAATGTACCGAACTAGCT 58.775 36.000 0.00 0.00 0.00 3.32
1976 5224 8.617761 TTCTTTTGTAAACAAATGTACCGAAC 57.382 30.769 16.46 0.00 44.30 3.95
1994 5242 7.977293 TGCAGGACATGAATGATTATTCTTTTG 59.023 33.333 11.13 8.60 42.56 2.44
2045 5293 8.177119 TGTATGCTCTACCTTTTTGTGAAAAT 57.823 30.769 0.00 0.00 34.45 1.82
2098 5348 6.265196 TCCTGAGATGCTTGTGTTTACAAAAT 59.735 34.615 0.00 0.00 45.53 1.82
2137 5387 8.420222 TCAAGAAATCATGCTGACCTTTTAAAA 58.580 29.630 0.00 0.00 0.00 1.52
2167 5417 4.038642 TGAAACACAAAATGGGCTAGGAAC 59.961 41.667 0.00 0.00 0.00 3.62
2237 5491 7.764443 CGAATAACAATGAGACCTAGAAGGAAA 59.236 37.037 0.00 0.00 37.67 3.13
2238 5492 7.093465 ACGAATAACAATGAGACCTAGAAGGAA 60.093 37.037 0.00 0.00 37.67 3.36
2239 5493 6.380274 ACGAATAACAATGAGACCTAGAAGGA 59.620 38.462 0.00 0.00 37.67 3.36
2337 6004 1.261619 GGGCAATGCTCTTATTCGACG 59.738 52.381 4.82 0.00 0.00 5.12
2349 6016 0.663153 GTACCGAATGAGGGCAATGC 59.337 55.000 0.00 0.00 35.02 3.56
2387 6054 5.588648 GCTACCAAACATAAACTGCAGGATA 59.411 40.000 19.93 10.87 0.00 2.59
2427 6103 7.707893 GCAGTAAATCCAAACAATTGCATAGAT 59.292 33.333 5.05 0.65 35.10 1.98
2498 6175 4.440758 CACCAGTGCGAAAATAACAAACAG 59.559 41.667 0.00 0.00 0.00 3.16
2537 6214 9.173939 GCAACTATCAATGTATGCAGAAAATAC 57.826 33.333 0.00 0.00 34.10 1.89
2564 6241 5.989777 GCGGGCTATTTACTAAGAAGAATCA 59.010 40.000 0.00 0.00 0.00 2.57
2565 6242 5.118817 CGCGGGCTATTTACTAAGAAGAATC 59.881 44.000 0.00 0.00 0.00 2.52
2571 6431 2.689471 TGTCGCGGGCTATTTACTAAGA 59.311 45.455 6.13 0.00 0.00 2.10
2586 6446 6.706055 AGTTATTTCATGGTATATGTCGCG 57.294 37.500 0.00 0.00 0.00 5.87
2638 6498 4.708177 AGTTCTGTACATGGCATGATACC 58.292 43.478 32.74 16.63 0.00 2.73
2644 6504 3.009473 ACAAGGAGTTCTGTACATGGCAT 59.991 43.478 0.00 0.00 0.00 4.40
2695 6555 3.005791 GCTGGAAGTTGGCACATAAAAGT 59.994 43.478 0.00 0.00 39.30 2.66
2705 6565 1.006922 GTGCTTGCTGGAAGTTGGC 60.007 57.895 10.66 0.00 35.30 4.52
2760 6620 5.385509 TTTAGGGAAGTTATGCACAAAGC 57.614 39.130 0.00 0.00 45.96 3.51
2808 6668 7.702785 AGACCCATAAATATATCAGGCATGTT 58.297 34.615 0.00 0.00 0.00 2.71
2809 6669 7.276088 AGACCCATAAATATATCAGGCATGT 57.724 36.000 0.00 0.00 0.00 3.21
2810 6670 8.051535 AGAAGACCCATAAATATATCAGGCATG 58.948 37.037 0.00 0.00 0.00 4.06
2822 6682 7.177878 CCTGCCATTATAGAAGACCCATAAAT 58.822 38.462 0.00 0.00 0.00 1.40
2874 6734 0.179048 GCCATGTCCATGTCCATCGA 60.179 55.000 6.53 0.00 37.11 3.59
2939 6799 2.181125 TCTTTAGCCGGTGATACCACA 58.819 47.619 1.90 0.00 44.93 4.17
3479 7339 8.968969 AGAGAACTAACCATACGATTAGAACTT 58.031 33.333 0.00 0.00 33.44 2.66
3611 7471 2.026905 GCCAGTGAACCAACCCTTGAA 61.027 52.381 0.00 0.00 0.00 2.69
3791 7651 1.225855 TGTGCACCAGATTGTCGTTC 58.774 50.000 15.69 0.00 0.00 3.95
3829 7689 4.624913 ACCCAGAGATGGATTAGAAGACA 58.375 43.478 0.00 0.00 0.00 3.41
3938 7798 1.496857 TCATTTCCACCACCACCAGAA 59.503 47.619 0.00 0.00 0.00 3.02
4090 7950 5.116882 GGTACTTCCATAATGTGAGTGGTC 58.883 45.833 0.00 0.00 34.61 4.02
4124 7984 1.135689 CCTTCGAGTTCGGCCAATTTG 60.136 52.381 2.24 0.00 40.29 2.32
4244 8104 7.739498 ACATAAAAGTACCAAGAAATCACGT 57.261 32.000 0.00 0.00 0.00 4.49
4245 8105 8.901748 CAAACATAAAAGTACCAAGAAATCACG 58.098 33.333 0.00 0.00 0.00 4.35
4246 8106 9.744468 ACAAACATAAAAGTACCAAGAAATCAC 57.256 29.630 0.00 0.00 0.00 3.06
4295 8157 2.266055 GCTGCAACGGAGGCTACT 59.734 61.111 0.00 0.00 0.00 2.57
4331 8193 4.952957 TCAGAAGTTCCAAACACATTCCAA 59.047 37.500 0.00 0.00 0.00 3.53
4373 8235 3.575256 ACATTCCAGTGTGTACGGTCTTA 59.425 43.478 0.00 0.00 0.00 2.10
4636 8513 5.099042 ACCTCGTATTTGCAGGTAATCTT 57.901 39.130 0.00 0.00 38.86 2.40
4653 8530 6.634805 AGCATATTCATGTATTAGGACCTCG 58.365 40.000 0.00 0.00 34.40 4.63
4716 8604 6.051179 AGGTGAGAAAATAACACTAGGACC 57.949 41.667 0.00 0.00 35.28 4.46
4727 8615 9.020731 GGGAAAATAAGTGAAGGTGAGAAAATA 57.979 33.333 0.00 0.00 0.00 1.40
4742 8630 6.636454 TCCACTATCACAGGGAAAATAAGT 57.364 37.500 0.00 0.00 0.00 2.24
4743 8631 7.775093 TCATTCCACTATCACAGGGAAAATAAG 59.225 37.037 0.00 0.00 42.26 1.73
4801 8689 3.035942 CAGAAAACAGTAAGCAACGTGC 58.964 45.455 0.00 0.00 45.46 5.34
4871 9134 6.687081 AAGTGACTAGAACTTCTATCGGAG 57.313 41.667 0.00 0.00 32.36 4.63
4929 9192 7.667219 ACGTTCTTATATTATAGGACGAAGGGA 59.333 37.037 15.69 0.00 44.28 4.20
4930 9193 7.824672 ACGTTCTTATATTATAGGACGAAGGG 58.175 38.462 15.69 5.28 44.28 3.95
4931 9194 9.688592 AAACGTTCTTATATTATAGGACGAAGG 57.311 33.333 15.69 11.19 44.28 3.46
4944 9207 9.924650 ACTCTAGTGTCAAAAACGTTCTTATAT 57.075 29.630 0.00 0.00 0.00 0.86
4946 9209 9.408069 CTACTCTAGTGTCAAAAACGTTCTTAT 57.592 33.333 0.00 0.00 0.00 1.73
4947 9210 8.408601 ACTACTCTAGTGTCAAAAACGTTCTTA 58.591 33.333 0.00 0.00 37.69 2.10
4948 9211 7.263496 ACTACTCTAGTGTCAAAAACGTTCTT 58.737 34.615 0.00 0.00 37.69 2.52
4949 9212 6.803642 ACTACTCTAGTGTCAAAAACGTTCT 58.196 36.000 0.00 0.00 37.69 3.01
4979 9242 9.838339 CTCTGTCCCATAATATAAGAGTGTTTT 57.162 33.333 0.00 0.00 0.00 2.43
4980 9243 8.432805 CCTCTGTCCCATAATATAAGAGTGTTT 58.567 37.037 0.00 0.00 0.00 2.83
4981 9244 7.016661 CCCTCTGTCCCATAATATAAGAGTGTT 59.983 40.741 0.00 0.00 0.00 3.32
4982 9245 6.498651 CCCTCTGTCCCATAATATAAGAGTGT 59.501 42.308 0.00 0.00 0.00 3.55
4983 9246 6.726299 TCCCTCTGTCCCATAATATAAGAGTG 59.274 42.308 0.00 0.00 0.00 3.51
4984 9247 6.875469 TCCCTCTGTCCCATAATATAAGAGT 58.125 40.000 0.00 0.00 0.00 3.24
4985 9248 6.957020 ACTCCCTCTGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
4986 9249 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
4987 9250 8.116669 TCTACTCCCTCTGTCCCATAATATAAG 58.883 40.741 0.00 0.00 0.00 1.73
4988 9251 8.008104 TCTACTCCCTCTGTCCCATAATATAA 57.992 38.462 0.00 0.00 0.00 0.98
4989 9252 7.599353 TCTACTCCCTCTGTCCCATAATATA 57.401 40.000 0.00 0.00 0.00 0.86
4990 9253 6.485388 TCTACTCCCTCTGTCCCATAATAT 57.515 41.667 0.00 0.00 0.00 1.28
4991 9254 5.942977 TCTACTCCCTCTGTCCCATAATA 57.057 43.478 0.00 0.00 0.00 0.98
4992 9255 4.834406 TCTACTCCCTCTGTCCCATAAT 57.166 45.455 0.00 0.00 0.00 1.28
4993 9256 4.232122 TCTTCTACTCCCTCTGTCCCATAA 59.768 45.833 0.00 0.00 0.00 1.90
4994 9257 3.792114 TCTTCTACTCCCTCTGTCCCATA 59.208 47.826 0.00 0.00 0.00 2.74
4995 9258 2.587777 TCTTCTACTCCCTCTGTCCCAT 59.412 50.000 0.00 0.00 0.00 4.00
4996 9259 2.000803 TCTTCTACTCCCTCTGTCCCA 58.999 52.381 0.00 0.00 0.00 4.37
4997 9260 2.024751 ACTCTTCTACTCCCTCTGTCCC 60.025 54.545 0.00 0.00 0.00 4.46
4998 9261 3.375647 ACTCTTCTACTCCCTCTGTCC 57.624 52.381 0.00 0.00 0.00 4.02
4999 9262 6.660094 TCTTTTACTCTTCTACTCCCTCTGTC 59.340 42.308 0.00 0.00 0.00 3.51
5000 9263 6.553857 TCTTTTACTCTTCTACTCCCTCTGT 58.446 40.000 0.00 0.00 0.00 3.41
5001 9264 7.654022 ATCTTTTACTCTTCTACTCCCTCTG 57.346 40.000 0.00 0.00 0.00 3.35
5002 9265 9.416284 CTTATCTTTTACTCTTCTACTCCCTCT 57.584 37.037 0.00 0.00 0.00 3.69
5003 9266 8.139350 GCTTATCTTTTACTCTTCTACTCCCTC 58.861 40.741 0.00 0.00 0.00 4.30
5004 9267 7.620094 TGCTTATCTTTTACTCTTCTACTCCCT 59.380 37.037 0.00 0.00 0.00 4.20
5005 9268 7.783042 TGCTTATCTTTTACTCTTCTACTCCC 58.217 38.462 0.00 0.00 0.00 4.30
5006 9269 9.308318 CTTGCTTATCTTTTACTCTTCTACTCC 57.692 37.037 0.00 0.00 0.00 3.85
5007 9270 8.813282 GCTTGCTTATCTTTTACTCTTCTACTC 58.187 37.037 0.00 0.00 0.00 2.59
5008 9271 7.766738 GGCTTGCTTATCTTTTACTCTTCTACT 59.233 37.037 0.00 0.00 0.00 2.57
5009 9272 7.254151 CGGCTTGCTTATCTTTTACTCTTCTAC 60.254 40.741 0.00 0.00 0.00 2.59
5010 9273 6.757010 CGGCTTGCTTATCTTTTACTCTTCTA 59.243 38.462 0.00 0.00 0.00 2.10
5011 9274 5.582665 CGGCTTGCTTATCTTTTACTCTTCT 59.417 40.000 0.00 0.00 0.00 2.85
5012 9275 5.220681 CCGGCTTGCTTATCTTTTACTCTTC 60.221 44.000 0.00 0.00 0.00 2.87
5013 9276 4.636206 CCGGCTTGCTTATCTTTTACTCTT 59.364 41.667 0.00 0.00 0.00 2.85
5014 9277 4.192317 CCGGCTTGCTTATCTTTTACTCT 58.808 43.478 0.00 0.00 0.00 3.24
5015 9278 3.939592 ACCGGCTTGCTTATCTTTTACTC 59.060 43.478 0.00 0.00 0.00 2.59
5016 9279 3.951663 ACCGGCTTGCTTATCTTTTACT 58.048 40.909 0.00 0.00 0.00 2.24
5020 9283 1.737793 CGAACCGGCTTGCTTATCTTT 59.262 47.619 0.00 0.00 0.00 2.52
5070 9333 5.591099 ACAGACCTGCAAAAATTAACACAG 58.409 37.500 0.00 0.00 0.00 3.66
5133 9396 7.323420 TGAGGTGTAGATGTCACTATTTTCAG 58.677 38.462 0.00 0.00 36.25 3.02
5168 9433 6.446781 AAGATCATGGTTTAGATGTTGCTG 57.553 37.500 0.00 0.00 0.00 4.41
5202 9467 4.161102 GGCCCTACTACTAATCATCCTGT 58.839 47.826 0.00 0.00 0.00 4.00
5232 9497 5.848286 ATATATTGTGGGGCTGAGATTCA 57.152 39.130 0.00 0.00 0.00 2.57
5234 9499 7.836183 GGAAATATATATTGTGGGGCTGAGATT 59.164 37.037 8.74 0.00 0.00 2.40
5239 9504 5.586243 CGAGGAAATATATATTGTGGGGCTG 59.414 44.000 8.74 0.00 0.00 4.85
5242 9507 6.062258 ACCGAGGAAATATATATTGTGGGG 57.938 41.667 8.74 9.22 0.00 4.96
5243 9508 6.598064 GGAACCGAGGAAATATATATTGTGGG 59.402 42.308 8.74 9.57 0.00 4.61
5263 9528 4.737054 TCTACGACAAGTAATTCGGAACC 58.263 43.478 0.00 0.00 39.63 3.62
5347 9614 3.178865 ACTCCCTCTGTCCGGAATTAAA 58.821 45.455 5.23 0.00 0.00 1.52
5348 9615 2.829023 ACTCCCTCTGTCCGGAATTAA 58.171 47.619 5.23 0.00 0.00 1.40
5356 9623 2.753247 AGGAATGTACTCCCTCTGTCC 58.247 52.381 0.00 0.00 35.95 4.02
5380 9647 2.267642 CATTTCGTCCTCGGGCCA 59.732 61.111 4.39 0.00 37.69 5.36
5381 9648 2.513897 CCATTTCGTCCTCGGGCC 60.514 66.667 0.00 0.00 37.69 5.80
5383 9650 0.460284 CTCACCATTTCGTCCTCGGG 60.460 60.000 0.00 0.00 37.69 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.