Multiple sequence alignment - TraesCS5B01G179800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G179800 chr5B 100.000 7625 0 0 1 7625 327610668 327603044 0.000000e+00 14081.0
1 TraesCS5B01G179800 chr5B 96.809 188 6 0 7185 7372 327603287 327603100 1.600000e-81 315.0
2 TraesCS5B01G179800 chr5B 96.809 188 6 0 7382 7569 327603484 327603297 1.600000e-81 315.0
3 TraesCS5B01G179800 chr5B 92.000 125 8 1 6859 6981 665965672 665965548 2.830000e-39 174.0
4 TraesCS5B01G179800 chr5B 91.339 127 11 0 6856 6982 680766986 680766860 2.830000e-39 174.0
5 TraesCS5B01G179800 chr5B 100.000 34 0 0 7153 7186 327603290 327603257 6.390000e-06 63.9
6 TraesCS5B01G179800 chr5B 100.000 34 0 0 7379 7412 327603516 327603483 6.390000e-06 63.9
7 TraesCS5B01G179800 chr5B 91.489 47 2 1 318 362 327610257 327610211 6.390000e-06 63.9
8 TraesCS5B01G179800 chr5B 91.489 47 2 1 412 458 327610351 327610307 6.390000e-06 63.9
9 TraesCS5B01G179800 chr5D 93.900 6508 255 66 1 6469 288186427 288180023 0.000000e+00 9688.0
10 TraesCS5B01G179800 chr5D 85.797 521 30 7 6852 7372 288179619 288179143 5.280000e-141 512.0
11 TraesCS5B01G179800 chr5D 89.069 247 13 8 7379 7625 288179319 288179087 2.080000e-75 294.0
12 TraesCS5B01G179800 chr5D 92.308 169 11 2 6586 6753 288179994 288179827 9.890000e-59 239.0
13 TraesCS5B01G179800 chr5D 90.196 51 3 1 311 359 288186041 288185991 1.780000e-06 65.8
14 TraesCS5B01G179800 chr5A 95.048 4342 158 30 2159 6468 381370342 381366026 0.000000e+00 6774.0
15 TraesCS5B01G179800 chr5A 89.084 1933 104 49 274 2158 381372246 381370373 0.000000e+00 2302.0
16 TraesCS5B01G179800 chr5A 93.656 331 18 3 1 329 381372556 381372227 6.870000e-135 492.0
17 TraesCS5B01G179800 chr5A 92.000 50 2 1 412 461 381372202 381372155 1.370000e-07 69.4
18 TraesCS5B01G179800 chr6A 78.715 996 200 12 4107 5096 282130452 282129463 0.000000e+00 654.0
19 TraesCS5B01G179800 chr6A 92.969 128 9 0 6854 6981 135052542 135052669 3.630000e-43 187.0
20 TraesCS5B01G179800 chr6A 100.000 42 0 0 6521 6562 214801921 214801880 2.280000e-10 78.7
21 TraesCS5B01G179800 chr6D 78.472 1008 205 12 4095 5096 219792953 219793954 0.000000e+00 649.0
22 TraesCS5B01G179800 chr6D 86.538 104 11 2 6463 6563 59753266 59753369 2.250000e-20 111.0
23 TraesCS5B01G179800 chr6D 94.118 51 3 0 6518 6568 254552538 254552588 2.280000e-10 78.7
24 TraesCS5B01G179800 chr3B 82.379 227 40 0 2994 3220 532934175 532933949 1.680000e-46 198.0
25 TraesCS5B01G179800 chr3B 95.000 60 3 0 6463 6522 52425389 52425330 2.270000e-15 95.3
26 TraesCS5B01G179800 chr3B 95.745 47 1 1 6521 6566 7236842 7236796 2.950000e-09 75.0
27 TraesCS5B01G179800 chr7A 92.913 127 9 0 6854 6980 393486896 393486770 1.310000e-42 185.0
28 TraesCS5B01G179800 chr7A 96.491 57 2 0 6466 6522 700332473 700332417 2.270000e-15 95.3
29 TraesCS5B01G179800 chr7A 96.491 57 2 0 6466 6522 726506910 726506854 2.270000e-15 95.3
30 TraesCS5B01G179800 chr7A 80.531 113 12 2 6465 6567 164643820 164643708 2.280000e-10 78.7
31 TraesCS5B01G179800 chr3A 91.473 129 11 0 6853 6981 732473097 732472969 2.190000e-40 178.0
32 TraesCS5B01G179800 chr1A 90.840 131 11 1 6855 6985 100688893 100688764 2.830000e-39 174.0
33 TraesCS5B01G179800 chr1A 93.939 66 3 1 6457 6522 558186815 558186879 1.750000e-16 99.0
34 TraesCS5B01G179800 chr1A 96.491 57 2 0 6466 6522 497187120 497187176 2.270000e-15 95.3
35 TraesCS5B01G179800 chr2A 91.270 126 11 0 6856 6981 682545627 682545502 1.020000e-38 172.0
36 TraesCS5B01G179800 chr7B 90.625 128 12 0 6854 6981 658317879 658317752 3.660000e-38 171.0
37 TraesCS5B01G179800 chr7B 84.112 107 7 3 6466 6562 89972079 89971973 2.270000e-15 95.3
38 TraesCS5B01G179800 chr2D 85.849 106 10 2 6463 6564 537526617 537526721 2.910000e-19 108.0
39 TraesCS5B01G179800 chr7D 93.846 65 3 1 6458 6522 547407839 547407776 6.300000e-16 97.1
40 TraesCS5B01G179800 chr3D 83.333 108 14 2 571 678 419589514 419589411 6.300000e-16 97.1
41 TraesCS5B01G179800 chr3D 84.946 93 12 2 6449 6540 568002247 568002338 8.150000e-15 93.5
42 TraesCS5B01G179800 chr1D 84.706 85 12 1 563 647 420651164 420651247 4.900000e-12 84.2
43 TraesCS5B01G179800 chr2B 88.060 67 7 1 561 627 669198292 669198357 2.280000e-10 78.7
44 TraesCS5B01G179800 chr4A 83.333 90 3 8 6484 6562 429228492 429228580 1.060000e-08 73.1
45 TraesCS5B01G179800 chr6B 81.053 95 12 4 592 685 720960012 720960101 3.820000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G179800 chr5B 327603044 327610668 7624 True 14081.00 14081 100.000 1 7625 1 chr5B.!!$R1 7624
1 TraesCS5B01G179800 chr5D 288179087 288186427 7340 True 2159.76 9688 90.254 1 7625 5 chr5D.!!$R1 7624
2 TraesCS5B01G179800 chr5A 381366026 381372556 6530 True 2409.35 6774 92.447 1 6468 4 chr5A.!!$R1 6467
3 TraesCS5B01G179800 chr6A 282129463 282130452 989 True 654.00 654 78.715 4107 5096 1 chr6A.!!$R2 989
4 TraesCS5B01G179800 chr6D 219792953 219793954 1001 False 649.00 649 78.472 4095 5096 1 chr6D.!!$F2 1001

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
513 556 1.276989 GGTGACCTTCGTATCCAACCA 59.723 52.381 0.00 0.0 0.00 3.67 F
1378 1438 0.683973 GATCCGAGCTGTCCCATCAT 59.316 55.000 0.00 0.0 0.00 2.45 F
1478 1539 0.532862 CTCAGTGTTTGCGGAGTGGT 60.533 55.000 0.00 0.0 0.00 4.16 F
3216 3342 0.105039 GGATGGGTGGAGATCGTGAC 59.895 60.000 0.00 0.0 0.00 3.67 F
3607 3743 0.973632 TCCAGTTGTCTATGTGGCGT 59.026 50.000 0.00 0.0 0.00 5.68 F
4429 4575 1.022451 TGGGCGCGTTTCAGGTTATC 61.022 55.000 8.43 0.0 0.00 1.75 F
5017 5163 0.246086 CAGAGTGGCGAGCTCTTCTT 59.754 55.000 12.85 0.0 40.97 2.52 F
6080 6241 0.243095 GTGACCCAGACTACCACGTC 59.757 60.000 0.00 0.0 0.00 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1458 1519 0.249868 CCACTCCGCAAACACTGAGA 60.250 55.000 0.00 0.00 0.00 3.27 R
3216 3342 1.134965 GGACAGAGATTCCACTCACCG 60.135 57.143 0.00 0.00 39.14 4.94 R
3292 3418 4.835615 AGCATCTAATAGACACCACCTAGG 59.164 45.833 7.41 7.41 45.67 3.02 R
4544 4690 0.107831 TCAAACAGGGGGACAACTCG 59.892 55.000 0.00 0.00 0.00 4.18 R
5017 5163 0.253894 CCACCACAGCCATCTCATCA 59.746 55.000 0.00 0.00 0.00 3.07 R
5936 6097 1.363807 GTGCCCAGCAACCTGAAAC 59.636 57.895 0.00 0.00 41.47 2.78 R
6473 6636 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79 R
7540 7854 1.351076 CCAATTGGAGGCTGGGTTTT 58.649 50.000 20.50 0.00 37.39 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 5.920193 ACCATGTCCATGAAGTTAAATGG 57.080 39.130 8.82 9.80 44.06 3.16
188 189 8.627208 AATTATATTCTCCATGTTTCGCTCAT 57.373 30.769 0.00 0.00 0.00 2.90
364 403 8.507524 AAATAGTACTCCCTCTGTAAAAATGC 57.492 34.615 0.00 0.00 0.00 3.56
385 424 6.844696 TGCGAAGAGACCATATACAAAATC 57.155 37.500 0.00 0.00 0.00 2.17
508 551 3.934068 TCTTTTGGTGACCTTCGTATCC 58.066 45.455 2.11 0.00 0.00 2.59
511 554 2.754946 TGGTGACCTTCGTATCCAAC 57.245 50.000 2.11 0.00 0.00 3.77
513 556 1.276989 GGTGACCTTCGTATCCAACCA 59.723 52.381 0.00 0.00 0.00 3.67
524 567 3.374058 CGTATCCAACCATTCAACTGGAC 59.626 47.826 0.00 0.00 40.69 4.02
549 592 6.045318 CAGATCGAACAAATGTACTCCATCT 58.955 40.000 0.00 0.00 31.75 2.90
604 647 6.464222 TCAGTCGACCAAGATTTAATCAAGT 58.536 36.000 13.01 1.39 0.00 3.16
605 648 6.590292 TCAGTCGACCAAGATTTAATCAAGTC 59.410 38.462 13.01 9.19 0.00 3.01
606 649 6.591834 CAGTCGACCAAGATTTAATCAAGTCT 59.408 38.462 13.01 0.00 32.49 3.24
607 650 6.814146 AGTCGACCAAGATTTAATCAAGTCTC 59.186 38.462 13.01 6.77 30.05 3.36
626 669 9.538508 CAAGTCTCAATCAAGTGACATATCATA 57.461 33.333 0.00 0.00 37.14 2.15
631 674 9.322773 CTCAATCAAGTGACATATCATACAAGT 57.677 33.333 0.00 0.00 37.14 3.16
685 729 4.343814 TGCACGGATCTTAATGTAGGATCA 59.656 41.667 8.95 0.00 41.52 2.92
703 747 7.546250 AGGATCAACTGAGACTTAGAAAGAA 57.454 36.000 0.47 0.00 0.00 2.52
1006 1050 0.806241 GAGTCACGACCTCCTCAGTC 59.194 60.000 0.00 0.00 0.00 3.51
1170 1223 2.501610 GGGAAGATCGAGCGGCTT 59.498 61.111 2.97 0.00 0.00 4.35
1320 1373 5.671463 ATCTCAGGGAGATGGTAACTCTA 57.329 43.478 7.88 0.00 46.21 2.43
1355 1415 2.839438 CGCACTGTTCGATCTCGCG 61.839 63.158 0.00 0.00 39.60 5.87
1378 1438 0.683973 GATCCGAGCTGTCCCATCAT 59.316 55.000 0.00 0.00 0.00 2.45
1458 1519 2.552373 GGGGTTCGAGTGGAGTTTTCAT 60.552 50.000 0.00 0.00 0.00 2.57
1469 1530 5.297776 AGTGGAGTTTTCATCTCAGTGTTTG 59.702 40.000 0.00 0.00 34.04 2.93
1478 1539 0.532862 CTCAGTGTTTGCGGAGTGGT 60.533 55.000 0.00 0.00 0.00 4.16
1526 1587 4.565564 GTCGGTAGATTTGTGCGTAATCTT 59.434 41.667 11.47 0.42 41.36 2.40
1543 1604 5.767816 AATCTTGTGTTGTTAAGTGGGAC 57.232 39.130 0.00 0.00 0.00 4.46
1556 1617 1.420138 AGTGGGACTTTGGACGATTGT 59.580 47.619 0.00 0.00 0.00 2.71
1566 1627 2.846371 GACGATTGTCCAGCTGCTT 58.154 52.632 8.66 0.00 39.30 3.91
1870 1960 7.946381 TGACAGTGTTCATCTCTTAGTCTAT 57.054 36.000 0.00 0.00 0.00 1.98
1899 1990 3.088789 AGTTGGGATAGACTGTCGAGT 57.911 47.619 1.52 0.00 33.98 4.18
1900 1991 2.755655 AGTTGGGATAGACTGTCGAGTG 59.244 50.000 1.52 0.00 30.16 3.51
1901 1992 2.492484 GTTGGGATAGACTGTCGAGTGT 59.508 50.000 1.52 0.00 30.16 3.55
1902 1993 2.366533 TGGGATAGACTGTCGAGTGTC 58.633 52.381 9.06 9.06 30.16 3.67
1903 1994 1.331138 GGGATAGACTGTCGAGTGTCG 59.669 57.143 10.77 0.00 42.10 4.35
1912 2003 2.314256 TCGAGTGTCGAGACAACGT 58.686 52.632 22.99 2.63 44.82 3.99
1955 2046 1.022735 GGCATGGAAGTGCTGATCAG 58.977 55.000 18.84 18.84 44.45 2.90
1961 2052 5.241064 GCATGGAAGTGCTGATCAGATTTAT 59.759 40.000 27.04 7.49 41.82 1.40
1966 2057 7.994911 TGGAAGTGCTGATCAGATTTATATGTT 59.005 33.333 27.04 5.47 0.00 2.71
1975 2066 8.623903 TGATCAGATTTATATGTTTGGAAGTGC 58.376 33.333 0.00 0.00 0.00 4.40
2009 2100 2.493278 ACATTGTCCATTGCTTGTAGGC 59.507 45.455 0.00 0.00 0.00 3.93
2010 2101 2.584835 TTGTCCATTGCTTGTAGGCT 57.415 45.000 0.00 0.00 0.00 4.58
2025 2116 3.451178 TGTAGGCTACTGTTCTTCCATCC 59.549 47.826 24.07 0.00 0.00 3.51
2050 2141 5.535783 TGTTTACCTTACCTAAACAAAGCCC 59.464 40.000 2.07 0.00 39.84 5.19
2063 2154 0.818040 AAAGCCCGAGTCCACACAAC 60.818 55.000 0.00 0.00 0.00 3.32
2140 2232 2.860136 GCCTTGACTTTTGTTGACTTGC 59.140 45.455 0.00 0.00 0.00 4.01
2193 2315 4.733542 TTAGGTTGCTGGCCGGCC 62.734 66.667 39.40 39.40 0.00 6.13
2198 2320 3.407083 TTGCTGGCCGGCCTGATA 61.407 61.111 45.58 32.77 37.23 2.15
2220 2344 2.861462 TTTTGTTCCCTTGCTTGTCG 57.139 45.000 0.00 0.00 0.00 4.35
2243 2367 9.134734 GTCGATTGATTAAGAAGACATCCTATC 57.865 37.037 0.00 0.00 0.00 2.08
2265 2389 9.722184 CTATCTCTTATGTTGATTGATGGACAT 57.278 33.333 0.00 0.00 36.72 3.06
2272 2396 5.893687 TGTTGATTGATGGACATGCATAAC 58.106 37.500 0.00 0.00 0.00 1.89
2467 2591 1.078143 GGCCGAGGAAGTGCAGATT 60.078 57.895 0.00 0.00 0.00 2.40
2629 2753 6.171921 CCTCAAGAATCAGACTGTTGATCTT 58.828 40.000 1.59 5.82 36.81 2.40
2708 2832 4.671766 CGAGGTTAGTTAGCCAAACATTGC 60.672 45.833 2.71 0.00 40.83 3.56
2712 2836 3.764885 AGTTAGCCAAACATTGCGATC 57.235 42.857 2.71 0.00 40.83 3.69
2952 3076 4.528596 AGTAGCCTTACAACATCAGACAGT 59.471 41.667 0.00 0.00 31.96 3.55
2959 3083 6.312426 CCTTACAACATCAGACAGTTGAGATC 59.688 42.308 19.45 0.00 46.01 2.75
3165 3291 1.017387 GGATCAATGAGCGTGTTCCC 58.983 55.000 0.00 0.00 31.31 3.97
3216 3342 0.105039 GGATGGGTGGAGATCGTGAC 59.895 60.000 0.00 0.00 0.00 3.67
3293 3419 6.803154 ATTTACAGTCACTGAGCTTTTACC 57.197 37.500 13.14 0.00 35.18 2.85
3295 3421 6.659745 TTACAGTCACTGAGCTTTTACCTA 57.340 37.500 13.14 0.00 35.18 3.08
3350 3481 7.947890 TGTATCTGGTCATATCATGGTACTACA 59.052 37.037 0.00 0.00 0.00 2.74
3455 3591 1.004440 AAGGGACGTCTGCTTGCTC 60.004 57.895 16.46 0.00 0.00 4.26
3607 3743 0.973632 TCCAGTTGTCTATGTGGCGT 59.026 50.000 0.00 0.00 0.00 5.68
3649 3785 3.991999 GCTGATGAGCTGCACCAA 58.008 55.556 1.02 0.00 42.52 3.67
3686 3822 5.287226 ACGCTAAGCATTACATAGGTACAC 58.713 41.667 0.00 0.00 0.00 2.90
3694 3830 7.434492 AGCATTACATAGGTACACATCAGTAC 58.566 38.462 0.00 0.00 42.78 2.73
3954 4094 5.013079 TGAGTTGTTATCCAGTGGACATTCT 59.987 40.000 15.86 10.12 32.98 2.40
4009 4149 5.939764 TGAGCAGGTTGAGTAATGTCTAT 57.060 39.130 0.00 0.00 0.00 1.98
4068 4214 9.975218 AATGGTACTATGTTTGGTAGAGAAATT 57.025 29.630 0.00 0.00 0.00 1.82
4429 4575 1.022451 TGGGCGCGTTTCAGGTTATC 61.022 55.000 8.43 0.00 0.00 1.75
4468 4614 7.037438 GTGACAATTTTGGAGCATATGTCATT 58.963 34.615 4.29 0.00 44.94 2.57
4544 4690 3.375299 GTGCCATATCAAGACACCACTTC 59.625 47.826 0.00 0.00 0.00 3.01
4810 4956 2.035783 GGGACTGTTGGAAGGGGC 59.964 66.667 0.00 0.00 0.00 5.80
4897 5043 5.063880 GTCACTGTTCAGGGTGAAGTTATT 58.936 41.667 1.92 0.00 42.88 1.40
5017 5163 0.246086 CAGAGTGGCGAGCTCTTCTT 59.754 55.000 12.85 0.00 40.97 2.52
5059 5205 5.277538 GGCAACTGAAGAATATCGGTCAATC 60.278 44.000 0.00 0.00 37.96 2.67
5111 5260 1.071699 TCCGCCTTGTAAGTTGCTCTT 59.928 47.619 0.00 0.00 39.89 2.85
5118 5267 5.412904 GCCTTGTAAGTTGCTCTTATTGACT 59.587 40.000 5.53 0.00 40.23 3.41
5133 5282 8.319057 TCTTATTGACTATCAGGCTAGGAAAA 57.681 34.615 0.00 0.00 0.00 2.29
5177 5326 8.776376 AACTTTTCAATATATTGCAAACCTGG 57.224 30.769 18.89 11.59 37.68 4.45
5183 5332 2.969821 TATTGCAAACCTGGACCTGT 57.030 45.000 1.71 0.00 0.00 4.00
5184 5333 2.086610 ATTGCAAACCTGGACCTGTT 57.913 45.000 1.71 0.00 0.00 3.16
5191 5340 0.977395 ACCTGGACCTGTTAGTGAGC 59.023 55.000 0.00 0.00 0.00 4.26
5193 5342 1.625818 CCTGGACCTGTTAGTGAGCTT 59.374 52.381 0.00 0.00 0.00 3.74
5194 5343 2.832129 CCTGGACCTGTTAGTGAGCTTA 59.168 50.000 0.00 0.00 0.00 3.09
5196 5345 4.499183 CTGGACCTGTTAGTGAGCTTAAG 58.501 47.826 0.00 0.00 0.00 1.85
5295 5447 7.228590 AGGTACCTTCTTTTGCAACTGTAATA 58.771 34.615 9.21 0.00 0.00 0.98
5296 5448 7.390718 AGGTACCTTCTTTTGCAACTGTAATAG 59.609 37.037 9.21 0.00 0.00 1.73
5297 5449 7.174426 GGTACCTTCTTTTGCAACTGTAATAGT 59.826 37.037 4.06 0.00 42.89 2.12
5298 5450 9.211485 GTACCTTCTTTTGCAACTGTAATAGTA 57.789 33.333 0.00 0.00 39.18 1.82
5299 5451 8.863872 ACCTTCTTTTGCAACTGTAATAGTAT 57.136 30.769 0.00 0.00 39.18 2.12
5300 5452 8.730680 ACCTTCTTTTGCAACTGTAATAGTATG 58.269 33.333 0.00 0.00 39.18 2.39
5301 5453 8.946085 CCTTCTTTTGCAACTGTAATAGTATGA 58.054 33.333 0.00 0.00 39.18 2.15
5302 5454 9.760660 CTTCTTTTGCAACTGTAATAGTATGAC 57.239 33.333 0.00 0.00 39.18 3.06
5303 5455 8.840833 TCTTTTGCAACTGTAATAGTATGACA 57.159 30.769 0.00 0.21 39.18 3.58
5304 5456 8.935844 TCTTTTGCAACTGTAATAGTATGACAG 58.064 33.333 21.79 21.79 44.98 3.51
5305 5457 8.840833 TTTTGCAACTGTAATAGTATGACAGA 57.159 30.769 27.90 8.29 42.65 3.41
5306 5458 7.827819 TTGCAACTGTAATAGTATGACAGAC 57.172 36.000 27.90 18.35 42.65 3.51
5307 5459 7.170393 TGCAACTGTAATAGTATGACAGACT 57.830 36.000 27.90 14.91 42.65 3.24
5309 5461 7.122799 TGCAACTGTAATAGTATGACAGACTCT 59.877 37.037 27.90 8.29 42.65 3.24
5310 5462 7.433719 GCAACTGTAATAGTATGACAGACTCTG 59.566 40.741 27.90 19.63 42.65 3.35
5312 5464 8.809468 ACTGTAATAGTATGACAGACTCTGAA 57.191 34.615 27.90 1.16 42.65 3.02
5347 5503 3.869623 CCACTCAGGCTATTGCAGT 57.130 52.632 0.66 0.00 41.91 4.40
5386 5542 2.837591 AGAAAAACAAACCTTGGTGCCT 59.162 40.909 0.00 0.00 34.12 4.75
5446 5604 0.814457 GTGTTTGACAGGCAACACCA 59.186 50.000 9.54 0.00 43.14 4.17
5485 5643 2.839486 TGAATATAGGAAGCAGGCCG 57.161 50.000 0.00 0.00 0.00 6.13
5500 5658 2.041115 GCCGTCCAAGAGAAAGCCC 61.041 63.158 0.00 0.00 0.00 5.19
5611 5769 1.270839 GGCGCCTTCAAGCATATCCTA 60.271 52.381 22.15 0.00 34.54 2.94
5831 5989 1.133976 AGCTGCTTCTTCAGGTGTGTT 60.134 47.619 0.00 0.00 42.52 3.32
5854 6012 6.425577 TTTACTAAAACGCAGAACACTTGT 57.574 33.333 0.00 0.00 0.00 3.16
5855 6013 7.536895 TTTACTAAAACGCAGAACACTTGTA 57.463 32.000 0.00 0.00 0.00 2.41
5856 6014 5.399604 ACTAAAACGCAGAACACTTGTAC 57.600 39.130 0.00 0.00 0.00 2.90
5869 6027 7.169308 CAGAACACTTGTACTACTTCGTTCAAT 59.831 37.037 0.00 0.00 35.19 2.57
5871 6029 9.136952 GAACACTTGTACTACTTCGTTCAATAT 57.863 33.333 0.00 0.00 33.44 1.28
5874 6032 9.135843 CACTTGTACTACTTCGTTCAATATCAA 57.864 33.333 0.00 0.00 0.00 2.57
5883 6041 3.313249 TCGTTCAATATCAATGCCAGCAG 59.687 43.478 0.00 0.00 0.00 4.24
5891 6052 3.701205 TCAATGCCAGCAGTCTTCTAA 57.299 42.857 0.00 0.00 0.00 2.10
5936 6097 9.981114 ACTAACAATAAAACTGGATTTTCTTGG 57.019 29.630 12.17 1.88 43.53 3.61
6077 6238 0.896940 TCCGTGACCCAGACTACCAC 60.897 60.000 0.00 0.00 0.00 4.16
6080 6241 0.243095 GTGACCCAGACTACCACGTC 59.757 60.000 0.00 0.00 0.00 4.34
6083 6244 2.632544 CCCAGACTACCACGTCGCA 61.633 63.158 0.00 0.00 38.90 5.10
6084 6245 1.511305 CCAGACTACCACGTCGCAT 59.489 57.895 0.00 0.00 38.90 4.73
6310 6473 3.713826 TTCCTTTTATCGAGGGCTGTT 57.286 42.857 0.00 0.00 34.93 3.16
6312 6475 2.569853 TCCTTTTATCGAGGGCTGTTGA 59.430 45.455 0.00 0.00 34.93 3.18
6470 6633 6.485648 ACTTGGAACACTTAACAATGTACTCC 59.514 38.462 0.00 0.00 39.29 3.85
6471 6634 5.931294 TGGAACACTTAACAATGTACTCCA 58.069 37.500 0.00 0.00 0.00 3.86
6472 6635 6.539173 TGGAACACTTAACAATGTACTCCAT 58.461 36.000 0.00 0.00 34.36 3.41
6473 6636 6.653320 TGGAACACTTAACAATGTACTCCATC 59.347 38.462 0.00 0.00 31.75 3.51
6474 6637 6.093633 GGAACACTTAACAATGTACTCCATCC 59.906 42.308 0.00 0.00 31.75 3.51
6475 6638 5.175859 ACACTTAACAATGTACTCCATCCG 58.824 41.667 0.00 0.00 31.75 4.18
6476 6639 5.175859 CACTTAACAATGTACTCCATCCGT 58.824 41.667 0.00 0.00 31.75 4.69
6477 6640 5.291128 CACTTAACAATGTACTCCATCCGTC 59.709 44.000 0.00 0.00 31.75 4.79
6478 6641 2.981859 ACAATGTACTCCATCCGTCC 57.018 50.000 0.00 0.00 31.75 4.79
6479 6642 1.136305 ACAATGTACTCCATCCGTCCG 59.864 52.381 0.00 0.00 31.75 4.79
6480 6643 1.407618 CAATGTACTCCATCCGTCCGA 59.592 52.381 0.00 0.00 31.75 4.55
6481 6644 1.771565 ATGTACTCCATCCGTCCGAA 58.228 50.000 0.00 0.00 0.00 4.30
6482 6645 1.548081 TGTACTCCATCCGTCCGAAA 58.452 50.000 0.00 0.00 0.00 3.46
6483 6646 1.894466 TGTACTCCATCCGTCCGAAAA 59.106 47.619 0.00 0.00 0.00 2.29
6484 6647 2.299582 TGTACTCCATCCGTCCGAAAAA 59.700 45.455 0.00 0.00 0.00 1.94
6485 6648 2.094762 ACTCCATCCGTCCGAAAAAG 57.905 50.000 0.00 0.00 0.00 2.27
6486 6649 0.727398 CTCCATCCGTCCGAAAAAGC 59.273 55.000 0.00 0.00 0.00 3.51
6487 6650 0.323629 TCCATCCGTCCGAAAAAGCT 59.676 50.000 0.00 0.00 0.00 3.74
6488 6651 1.165270 CCATCCGTCCGAAAAAGCTT 58.835 50.000 0.00 0.00 0.00 3.74
6489 6652 1.135689 CCATCCGTCCGAAAAAGCTTG 60.136 52.381 0.00 0.00 0.00 4.01
6490 6653 1.535462 CATCCGTCCGAAAAAGCTTGT 59.465 47.619 0.00 0.00 0.00 3.16
6491 6654 1.223187 TCCGTCCGAAAAAGCTTGTC 58.777 50.000 0.00 0.00 0.00 3.18
6492 6655 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
6493 6656 1.226746 CGTCCGAAAAAGCTTGTCCT 58.773 50.000 0.00 0.00 0.00 3.85
6494 6657 1.602377 CGTCCGAAAAAGCTTGTCCTT 59.398 47.619 0.00 0.00 0.00 3.36
6495 6658 2.349532 CGTCCGAAAAAGCTTGTCCTTC 60.350 50.000 0.00 0.32 0.00 3.46
6496 6659 2.616842 GTCCGAAAAAGCTTGTCCTTCA 59.383 45.455 0.00 0.00 0.00 3.02
6497 6660 3.066203 GTCCGAAAAAGCTTGTCCTTCAA 59.934 43.478 0.00 0.00 34.61 2.69
6498 6661 3.697045 TCCGAAAAAGCTTGTCCTTCAAA 59.303 39.130 0.00 0.00 35.48 2.69
6499 6662 4.340950 TCCGAAAAAGCTTGTCCTTCAAAT 59.659 37.500 0.00 0.00 35.48 2.32
6500 6663 4.445385 CCGAAAAAGCTTGTCCTTCAAATG 59.555 41.667 0.00 0.00 35.48 2.32
6501 6664 4.445385 CGAAAAAGCTTGTCCTTCAAATGG 59.555 41.667 0.00 0.00 35.48 3.16
6502 6665 5.600696 GAAAAAGCTTGTCCTTCAAATGGA 58.399 37.500 0.00 0.00 35.48 3.41
6503 6666 5.813513 AAAAGCTTGTCCTTCAAATGGAT 57.186 34.783 0.00 0.00 35.87 3.41
6504 6667 4.796038 AAGCTTGTCCTTCAAATGGATG 57.204 40.909 0.00 0.00 35.87 3.51
6505 6668 3.771216 AGCTTGTCCTTCAAATGGATGT 58.229 40.909 0.00 0.00 35.87 3.06
6506 6669 4.922206 AGCTTGTCCTTCAAATGGATGTA 58.078 39.130 0.00 0.00 35.87 2.29
6507 6670 5.513233 AGCTTGTCCTTCAAATGGATGTAT 58.487 37.500 0.00 0.00 35.87 2.29
6508 6671 5.954150 AGCTTGTCCTTCAAATGGATGTATT 59.046 36.000 0.00 0.00 35.87 1.89
6509 6672 6.438425 AGCTTGTCCTTCAAATGGATGTATTT 59.562 34.615 0.00 0.00 35.87 1.40
6510 6673 7.615365 AGCTTGTCCTTCAAATGGATGTATTTA 59.385 33.333 0.00 0.00 35.87 1.40
6511 6674 7.917505 GCTTGTCCTTCAAATGGATGTATTTAG 59.082 37.037 0.00 0.00 35.87 1.85
6512 6675 7.333528 TGTCCTTCAAATGGATGTATTTAGC 57.666 36.000 0.00 0.00 35.87 3.09
6513 6676 6.889177 TGTCCTTCAAATGGATGTATTTAGCA 59.111 34.615 0.00 0.00 35.87 3.49
6514 6677 7.148086 TGTCCTTCAAATGGATGTATTTAGCAC 60.148 37.037 0.00 0.00 35.87 4.40
6515 6678 6.321181 TCCTTCAAATGGATGTATTTAGCACC 59.679 38.462 0.00 0.00 0.00 5.01
6516 6679 6.096705 CCTTCAAATGGATGTATTTAGCACCA 59.903 38.462 0.00 0.00 0.00 4.17
6517 6680 7.363705 CCTTCAAATGGATGTATTTAGCACCAA 60.364 37.037 0.00 0.00 0.00 3.67
6518 6681 7.099266 TCAAATGGATGTATTTAGCACCAAG 57.901 36.000 0.00 0.00 0.00 3.61
6519 6682 6.663093 TCAAATGGATGTATTTAGCACCAAGT 59.337 34.615 0.00 0.00 0.00 3.16
6520 6683 7.178274 TCAAATGGATGTATTTAGCACCAAGTT 59.822 33.333 0.00 0.00 0.00 2.66
6521 6684 8.465999 CAAATGGATGTATTTAGCACCAAGTTA 58.534 33.333 0.00 0.00 0.00 2.24
6522 6685 6.995511 TGGATGTATTTAGCACCAAGTTAC 57.004 37.500 0.00 0.00 0.00 2.50
6523 6686 6.477253 TGGATGTATTTAGCACCAAGTTACA 58.523 36.000 0.00 0.00 0.00 2.41
6524 6687 7.116075 TGGATGTATTTAGCACCAAGTTACAT 58.884 34.615 0.00 0.00 0.00 2.29
6525 6688 7.282224 TGGATGTATTTAGCACCAAGTTACATC 59.718 37.037 10.27 10.27 40.00 3.06
6526 6689 6.995511 TGTATTTAGCACCAAGTTACATCC 57.004 37.500 0.00 0.00 0.00 3.51
6527 6690 6.477253 TGTATTTAGCACCAAGTTACATCCA 58.523 36.000 0.00 0.00 0.00 3.41
6528 6691 7.116075 TGTATTTAGCACCAAGTTACATCCAT 58.884 34.615 0.00 0.00 0.00 3.41
6529 6692 7.613801 TGTATTTAGCACCAAGTTACATCCATT 59.386 33.333 0.00 0.00 0.00 3.16
6530 6693 6.909550 TTTAGCACCAAGTTACATCCATTT 57.090 33.333 0.00 0.00 0.00 2.32
6531 6694 4.789012 AGCACCAAGTTACATCCATTTG 57.211 40.909 0.00 0.00 0.00 2.32
6532 6695 4.406456 AGCACCAAGTTACATCCATTTGA 58.594 39.130 0.00 0.00 0.00 2.69
6533 6696 4.460382 AGCACCAAGTTACATCCATTTGAG 59.540 41.667 0.00 0.00 0.00 3.02
6534 6697 4.380867 GCACCAAGTTACATCCATTTGAGG 60.381 45.833 0.00 0.00 0.00 3.86
6535 6698 4.158394 CACCAAGTTACATCCATTTGAGGG 59.842 45.833 0.00 0.00 0.00 4.30
6536 6699 4.044065 ACCAAGTTACATCCATTTGAGGGA 59.956 41.667 0.00 0.00 39.14 4.20
6537 6700 4.399303 CCAAGTTACATCCATTTGAGGGAC 59.601 45.833 0.00 0.00 37.23 4.46
6538 6701 4.927267 AGTTACATCCATTTGAGGGACA 57.073 40.909 0.00 0.00 37.23 4.02
6539 6702 5.255397 AGTTACATCCATTTGAGGGACAA 57.745 39.130 0.00 0.00 37.23 3.18
6562 6725 2.730550 TTTTCGGACGAAGGGAGTAC 57.269 50.000 7.25 0.00 35.38 2.73
6563 6726 1.915141 TTTCGGACGAAGGGAGTACT 58.085 50.000 7.25 0.00 35.38 2.73
6572 6735 0.919710 AAGGGAGTACTGGATTGGGC 59.080 55.000 0.00 0.00 0.00 5.36
6573 6736 0.253160 AGGGAGTACTGGATTGGGCA 60.253 55.000 0.00 0.00 0.00 5.36
6580 6743 5.129368 AGTACTGGATTGGGCATTTATGT 57.871 39.130 0.00 0.00 0.00 2.29
6581 6744 4.889409 AGTACTGGATTGGGCATTTATGTG 59.111 41.667 0.00 0.00 0.00 3.21
6630 6800 1.032014 TTCTTGCTTGTGGTGCCTTC 58.968 50.000 0.00 0.00 0.00 3.46
6635 6805 1.234615 GCTTGTGGTGCCTTCGCTTA 61.235 55.000 0.00 0.00 35.36 3.09
6647 6817 4.332543 TGCCTTCGCTTAAATCAGTGTATG 59.667 41.667 0.00 0.00 35.36 2.39
6648 6818 4.332819 GCCTTCGCTTAAATCAGTGTATGT 59.667 41.667 0.00 0.00 0.00 2.29
6675 6845 3.552068 GCTTACCTGTTGCGGTTGAAATT 60.552 43.478 0.00 0.00 38.49 1.82
6676 6846 2.507339 ACCTGTTGCGGTTGAAATTG 57.493 45.000 0.00 0.00 31.94 2.32
6682 6852 0.388659 TGCGGTTGAAATTGCAGCTT 59.611 45.000 0.00 0.00 32.73 3.74
6744 6914 8.588290 TTCTATTTAGAAGGCCTGCAATAAAA 57.412 30.769 15.05 8.20 37.40 1.52
6745 6915 8.766994 TCTATTTAGAAGGCCTGCAATAAAAT 57.233 30.769 15.05 14.58 0.00 1.82
6746 6916 8.632679 TCTATTTAGAAGGCCTGCAATAAAATG 58.367 33.333 15.05 7.45 0.00 2.32
6747 6917 6.603940 TTTAGAAGGCCTGCAATAAAATGT 57.396 33.333 15.05 0.00 0.00 2.71
6748 6918 4.460948 AGAAGGCCTGCAATAAAATGTG 57.539 40.909 15.05 0.00 0.00 3.21
6749 6919 2.678471 AGGCCTGCAATAAAATGTGC 57.322 45.000 3.11 0.00 41.29 4.57
6753 6923 3.371898 GGCCTGCAATAAAATGTGCTTTC 59.628 43.478 0.00 0.00 41.48 2.62
6754 6924 4.248058 GCCTGCAATAAAATGTGCTTTCT 58.752 39.130 0.00 0.00 41.48 2.52
6755 6925 5.410067 GCCTGCAATAAAATGTGCTTTCTA 58.590 37.500 0.00 0.00 41.48 2.10
6756 6926 5.517770 GCCTGCAATAAAATGTGCTTTCTAG 59.482 40.000 0.00 0.00 41.48 2.43
6758 6928 6.127647 CCTGCAATAAAATGTGCTTTCTAGGA 60.128 38.462 0.00 0.00 41.48 2.94
6759 6929 7.225784 TGCAATAAAATGTGCTTTCTAGGAA 57.774 32.000 0.00 0.00 41.48 3.36
6761 6931 8.313292 TGCAATAAAATGTGCTTTCTAGGAATT 58.687 29.630 0.00 0.00 41.48 2.17
6762 6932 9.154847 GCAATAAAATGTGCTTTCTAGGAATTT 57.845 29.630 0.00 0.00 37.78 1.82
6764 6934 9.875691 AATAAAATGTGCTTTCTAGGAATTTCC 57.124 29.630 7.39 7.39 36.58 3.13
6786 6956 8.703604 TTCCTGCTTTATATACATCTAATCGC 57.296 34.615 0.00 0.00 0.00 4.58
6787 6957 7.265673 TCCTGCTTTATATACATCTAATCGCC 58.734 38.462 0.00 0.00 0.00 5.54
6788 6958 7.041721 CCTGCTTTATATACATCTAATCGCCA 58.958 38.462 0.00 0.00 0.00 5.69
6789 6959 7.549134 CCTGCTTTATATACATCTAATCGCCAA 59.451 37.037 0.00 0.00 0.00 4.52
6790 6960 9.102757 CTGCTTTATATACATCTAATCGCCAAT 57.897 33.333 0.00 0.00 0.00 3.16
6791 6961 9.098355 TGCTTTATATACATCTAATCGCCAATC 57.902 33.333 0.00 0.00 0.00 2.67
6792 6962 8.269424 GCTTTATATACATCTAATCGCCAATCG 58.731 37.037 0.00 0.00 40.15 3.34
6793 6963 8.642908 TTTATATACATCTAATCGCCAATCGG 57.357 34.615 0.00 0.00 39.05 4.18
6794 6964 2.910688 ACATCTAATCGCCAATCGGT 57.089 45.000 0.00 0.00 39.05 4.69
6795 6965 3.194005 ACATCTAATCGCCAATCGGTT 57.806 42.857 0.00 0.00 44.77 4.44
6796 6966 4.330944 ACATCTAATCGCCAATCGGTTA 57.669 40.909 0.00 0.00 40.20 2.85
6817 6987 2.502142 TGAATGAGCTGGATTGCAGT 57.498 45.000 7.05 0.00 34.99 4.40
6835 7005 1.648568 AGTGGGAAGAGGAGATGGAGA 59.351 52.381 0.00 0.00 0.00 3.71
6836 7006 2.045047 AGTGGGAAGAGGAGATGGAGAA 59.955 50.000 0.00 0.00 0.00 2.87
6837 7007 2.840651 GTGGGAAGAGGAGATGGAGAAA 59.159 50.000 0.00 0.00 0.00 2.52
6838 7008 3.264450 GTGGGAAGAGGAGATGGAGAAAA 59.736 47.826 0.00 0.00 0.00 2.29
6839 7009 3.916349 TGGGAAGAGGAGATGGAGAAAAA 59.084 43.478 0.00 0.00 0.00 1.94
6840 7010 4.263506 TGGGAAGAGGAGATGGAGAAAAAC 60.264 45.833 0.00 0.00 0.00 2.43
6841 7011 4.265893 GGAAGAGGAGATGGAGAAAAACC 58.734 47.826 0.00 0.00 0.00 3.27
6842 7012 4.265893 GAAGAGGAGATGGAGAAAAACCC 58.734 47.826 0.00 0.00 0.00 4.11
6843 7013 3.536287 AGAGGAGATGGAGAAAAACCCT 58.464 45.455 0.00 0.00 0.00 4.34
6844 7014 3.521531 AGAGGAGATGGAGAAAAACCCTC 59.478 47.826 0.00 0.00 39.26 4.30
6845 7015 3.521531 GAGGAGATGGAGAAAAACCCTCT 59.478 47.826 0.00 0.00 36.81 3.69
6848 7018 5.190726 AGGAGATGGAGAAAAACCCTCTAAG 59.809 44.000 0.00 0.00 33.75 2.18
6850 7020 5.101529 AGATGGAGAAAAACCCTCTAAGGA 58.898 41.667 0.00 0.00 37.67 3.36
6883 7197 5.709631 AGAATGAAAAGAGAGGGAAAGAAGC 59.290 40.000 0.00 0.00 0.00 3.86
6916 7230 9.540538 TCTTATTCTTATAGGAGAATGAGGAGG 57.459 37.037 14.39 0.00 44.02 4.30
6918 7232 5.346782 TCTTATAGGAGAATGAGGAGGCT 57.653 43.478 0.00 0.00 0.00 4.58
6926 7240 0.909610 AATGAGGAGGCTCGAACCCA 60.910 55.000 8.69 2.17 0.00 4.51
6957 7271 2.071778 ACAACCTTTGTGCTGTCCAT 57.928 45.000 0.00 0.00 43.48 3.41
6969 7283 2.187946 GTCCATCGCTCCACCCAG 59.812 66.667 0.00 0.00 0.00 4.45
6993 7307 1.554617 AGCTCCTCTGAAAAGCCTCTC 59.445 52.381 7.18 0.00 36.69 3.20
6998 7312 2.355920 CCTCTGAAAAGCCTCTCAGCAT 60.356 50.000 2.43 0.00 39.17 3.79
7017 7331 2.969628 TTTTGTTGCGAAACCCACAT 57.030 40.000 3.18 0.00 0.00 3.21
7031 7345 6.315144 CGAAACCCACATAGTTACATCATTCA 59.685 38.462 0.00 0.00 0.00 2.57
7034 7348 6.721318 ACCCACATAGTTACATCATTCAGTT 58.279 36.000 0.00 0.00 0.00 3.16
7045 7359 6.748333 ACATCATTCAGTTCACATGTAAGG 57.252 37.500 0.00 0.00 0.00 2.69
7052 7366 6.055231 TCAGTTCACATGTAAGGAAAAACG 57.945 37.500 0.00 0.00 0.00 3.60
7081 7395 3.576078 TCACCATCCCACCAATACATC 57.424 47.619 0.00 0.00 0.00 3.06
7087 7401 4.505566 CCATCCCACCAATACATCGAAGAT 60.506 45.833 0.00 0.00 45.12 2.40
7088 7402 4.071961 TCCCACCAATACATCGAAGATG 57.928 45.455 8.33 8.33 45.12 2.90
7188 7502 3.750130 GCCTATGTCATGCCACTAAGATG 59.250 47.826 0.00 0.00 0.00 2.90
7189 7503 4.744867 GCCTATGTCATGCCACTAAGATGT 60.745 45.833 0.00 0.00 0.00 3.06
7191 7505 5.237996 CCTATGTCATGCCACTAAGATGTTG 59.762 44.000 0.00 0.00 0.00 3.33
7193 7507 2.749076 GTCATGCCACTAAGATGTTGCA 59.251 45.455 0.00 0.00 41.63 4.08
7194 7508 3.379372 GTCATGCCACTAAGATGTTGCAT 59.621 43.478 0.00 0.00 45.95 3.96
7196 7510 1.473677 TGCCACTAAGATGTTGCATGC 59.526 47.619 11.82 11.82 34.38 4.06
7197 7511 1.202336 GCCACTAAGATGTTGCATGCC 60.202 52.381 16.68 0.28 0.00 4.40
7198 7512 2.372264 CCACTAAGATGTTGCATGCCT 58.628 47.619 16.68 0.68 0.00 4.75
7199 7513 3.544684 CCACTAAGATGTTGCATGCCTA 58.455 45.455 16.68 0.00 0.00 3.93
7200 7514 4.139786 CCACTAAGATGTTGCATGCCTAT 58.860 43.478 16.68 6.68 0.00 2.57
7201 7515 4.023450 CCACTAAGATGTTGCATGCCTATG 60.023 45.833 16.68 4.36 37.36 2.23
7202 7516 4.577693 CACTAAGATGTTGCATGCCTATGT 59.422 41.667 16.68 2.47 36.65 2.29
7203 7517 4.818546 ACTAAGATGTTGCATGCCTATGTC 59.181 41.667 16.68 7.13 36.65 3.06
7204 7518 3.286329 AGATGTTGCATGCCTATGTCA 57.714 42.857 16.68 5.70 36.65 3.58
7205 7519 3.828921 AGATGTTGCATGCCTATGTCAT 58.171 40.909 16.68 10.15 36.65 3.06
7206 7520 3.568430 AGATGTTGCATGCCTATGTCATG 59.432 43.478 16.68 0.00 43.02 3.07
7211 7525 1.977056 CATGCCTATGTCATGCCACT 58.023 50.000 0.00 0.00 35.48 4.00
7212 7526 3.130280 CATGCCTATGTCATGCCACTA 57.870 47.619 0.00 0.00 35.48 2.74
7213 7527 3.479489 CATGCCTATGTCATGCCACTAA 58.521 45.455 0.00 0.00 35.48 2.24
7214 7528 3.198409 TGCCTATGTCATGCCACTAAG 57.802 47.619 0.00 0.00 0.00 2.18
7215 7529 2.505407 TGCCTATGTCATGCCACTAAGT 59.495 45.455 0.00 0.00 0.00 2.24
7216 7530 3.054434 TGCCTATGTCATGCCACTAAGTT 60.054 43.478 0.00 0.00 0.00 2.66
7217 7531 3.313526 GCCTATGTCATGCCACTAAGTTG 59.686 47.826 0.00 0.00 0.00 3.16
7218 7532 4.769688 CCTATGTCATGCCACTAAGTTGA 58.230 43.478 0.00 0.00 0.00 3.18
7219 7533 5.371526 CCTATGTCATGCCACTAAGTTGAT 58.628 41.667 0.00 0.00 0.00 2.57
7220 7534 5.824624 CCTATGTCATGCCACTAAGTTGATT 59.175 40.000 0.00 0.00 0.00 2.57
7221 7535 5.571784 ATGTCATGCCACTAAGTTGATTG 57.428 39.130 0.00 0.00 0.00 2.67
7222 7536 4.650734 TGTCATGCCACTAAGTTGATTGA 58.349 39.130 0.00 0.00 0.00 2.57
7223 7537 5.255687 TGTCATGCCACTAAGTTGATTGAT 58.744 37.500 0.00 0.00 0.00 2.57
7224 7538 5.711506 TGTCATGCCACTAAGTTGATTGATT 59.288 36.000 0.00 0.00 0.00 2.57
7225 7539 6.883756 TGTCATGCCACTAAGTTGATTGATTA 59.116 34.615 0.00 0.00 0.00 1.75
7226 7540 7.066163 TGTCATGCCACTAAGTTGATTGATTAG 59.934 37.037 0.00 0.00 33.63 1.73
7227 7541 7.280876 GTCATGCCACTAAGTTGATTGATTAGA 59.719 37.037 0.00 0.00 32.16 2.10
7228 7542 7.994911 TCATGCCACTAAGTTGATTGATTAGAT 59.005 33.333 0.00 0.00 32.16 1.98
7229 7543 7.558161 TGCCACTAAGTTGATTGATTAGATG 57.442 36.000 0.00 0.00 32.16 2.90
7230 7544 7.112122 TGCCACTAAGTTGATTGATTAGATGT 58.888 34.615 0.00 0.00 32.16 3.06
7231 7545 7.611467 TGCCACTAAGTTGATTGATTAGATGTT 59.389 33.333 0.00 0.00 32.16 2.71
7232 7546 7.912250 GCCACTAAGTTGATTGATTAGATGTTG 59.088 37.037 0.00 0.00 32.16 3.33
7233 7547 7.912250 CCACTAAGTTGATTGATTAGATGTTGC 59.088 37.037 0.00 0.00 32.16 4.17
7234 7548 8.453320 CACTAAGTTGATTGATTAGATGTTGCA 58.547 33.333 0.00 0.00 32.16 4.08
7251 7565 8.513774 AGATGTTGCATTTTGTTTTTGTTCTTT 58.486 25.926 0.00 0.00 0.00 2.52
7287 7601 1.173043 CAATATGCCCACACGTTGGT 58.827 50.000 13.41 0.00 45.25 3.67
7288 7602 1.543802 CAATATGCCCACACGTTGGTT 59.456 47.619 13.41 1.67 45.25 3.67
7352 7666 6.775594 AATCCATTAGAGTAAAAACCCAGC 57.224 37.500 0.00 0.00 0.00 4.85
7354 7668 4.291249 TCCATTAGAGTAAAAACCCAGCCT 59.709 41.667 0.00 0.00 0.00 4.58
7356 7670 2.881111 AGAGTAAAAACCCAGCCTCC 57.119 50.000 0.00 0.00 0.00 4.30
7357 7671 2.062636 AGAGTAAAAACCCAGCCTCCA 58.937 47.619 0.00 0.00 0.00 3.86
7358 7672 2.445525 AGAGTAAAAACCCAGCCTCCAA 59.554 45.455 0.00 0.00 0.00 3.53
7359 7673 3.076032 AGAGTAAAAACCCAGCCTCCAAT 59.924 43.478 0.00 0.00 0.00 3.16
7360 7674 3.832490 GAGTAAAAACCCAGCCTCCAATT 59.168 43.478 0.00 0.00 0.00 2.32
7361 7675 3.578282 AGTAAAAACCCAGCCTCCAATTG 59.422 43.478 0.00 0.00 0.00 2.32
7362 7676 1.351076 AAAACCCAGCCTCCAATTGG 58.649 50.000 19.08 19.08 0.00 3.16
7369 7683 3.882131 GCCTCCAATTGGCTCTACA 57.118 52.632 20.33 0.00 46.38 2.74
7370 7684 2.355010 GCCTCCAATTGGCTCTACAT 57.645 50.000 20.33 0.00 46.38 2.29
7371 7685 1.952296 GCCTCCAATTGGCTCTACATG 59.048 52.381 20.33 0.00 46.38 3.21
7372 7686 1.952296 CCTCCAATTGGCTCTACATGC 59.048 52.381 20.33 0.00 34.44 4.06
7373 7687 2.422519 CCTCCAATTGGCTCTACATGCT 60.423 50.000 20.33 0.00 34.44 3.79
7374 7688 3.181451 CCTCCAATTGGCTCTACATGCTA 60.181 47.826 20.33 0.00 34.44 3.49
7375 7689 4.454678 CTCCAATTGGCTCTACATGCTAA 58.545 43.478 20.33 0.00 35.51 3.09
7376 7690 4.854173 TCCAATTGGCTCTACATGCTAAA 58.146 39.130 20.33 0.00 34.76 1.85
7377 7691 5.448654 TCCAATTGGCTCTACATGCTAAAT 58.551 37.500 20.33 0.00 34.76 1.40
7378 7692 6.600388 TCCAATTGGCTCTACATGCTAAATA 58.400 36.000 20.33 0.00 34.76 1.40
7379 7693 7.233632 TCCAATTGGCTCTACATGCTAAATAT 58.766 34.615 20.33 0.00 34.76 1.28
7380 7694 7.725397 TCCAATTGGCTCTACATGCTAAATATT 59.275 33.333 20.33 0.00 34.76 1.28
7381 7695 9.013229 CCAATTGGCTCTACATGCTAAATATTA 57.987 33.333 12.53 0.00 34.76 0.98
7385 7699 9.440773 TTGGCTCTACATGCTAAATATTAGATG 57.559 33.333 0.00 5.17 0.00 2.90
7386 7700 8.597167 TGGCTCTACATGCTAAATATTAGATGT 58.403 33.333 14.06 14.06 0.00 3.06
7387 7701 9.442047 GGCTCTACATGCTAAATATTAGATGTT 57.558 33.333 14.48 5.85 0.00 2.71
7390 7704 9.777297 TCTACATGCTAAATATTAGATGTTGCA 57.223 29.630 14.48 0.00 0.00 4.08
7393 7707 8.169839 CATGCTAAATATTAGATGTTGCATGC 57.830 34.615 11.82 11.82 45.09 4.06
7394 7708 6.680810 TGCTAAATATTAGATGTTGCATGCC 58.319 36.000 16.68 0.28 0.00 4.40
7395 7709 6.491062 TGCTAAATATTAGATGTTGCATGCCT 59.509 34.615 16.68 6.95 0.00 4.75
7396 7710 7.665145 TGCTAAATATTAGATGTTGCATGCCTA 59.335 33.333 16.68 5.86 0.00 3.93
7397 7711 8.680903 GCTAAATATTAGATGTTGCATGCCTAT 58.319 33.333 16.68 6.68 0.00 2.57
7398 7712 9.999009 CTAAATATTAGATGTTGCATGCCTATG 57.001 33.333 16.68 0.00 37.36 2.23
7399 7713 8.413309 AAATATTAGATGTTGCATGCCTATGT 57.587 30.769 16.68 7.92 36.65 2.29
7400 7714 5.954296 ATTAGATGTTGCATGCCTATGTC 57.046 39.130 16.68 7.13 36.65 3.06
7401 7715 3.286329 AGATGTTGCATGCCTATGTCA 57.714 42.857 16.68 5.70 36.65 3.58
7402 7716 3.828921 AGATGTTGCATGCCTATGTCAT 58.171 40.909 16.68 10.15 36.65 3.06
7403 7717 3.568430 AGATGTTGCATGCCTATGTCATG 59.432 43.478 16.68 0.00 43.02 3.07
7408 7722 1.977056 CATGCCTATGTCATGCCACT 58.023 50.000 0.00 0.00 35.48 4.00
7409 7723 3.130280 CATGCCTATGTCATGCCACTA 57.870 47.619 0.00 0.00 35.48 2.74
7410 7724 3.479489 CATGCCTATGTCATGCCACTAA 58.521 45.455 0.00 0.00 35.48 2.24
7411 7725 3.198409 TGCCTATGTCATGCCACTAAG 57.802 47.619 0.00 0.00 0.00 2.18
7412 7726 2.505407 TGCCTATGTCATGCCACTAAGT 59.495 45.455 0.00 0.00 0.00 2.24
7413 7727 3.054434 TGCCTATGTCATGCCACTAAGTT 60.054 43.478 0.00 0.00 0.00 2.66
7414 7728 3.313526 GCCTATGTCATGCCACTAAGTTG 59.686 47.826 0.00 0.00 0.00 3.16
7415 7729 4.769688 CCTATGTCATGCCACTAAGTTGA 58.230 43.478 0.00 0.00 0.00 3.18
7416 7730 5.371526 CCTATGTCATGCCACTAAGTTGAT 58.628 41.667 0.00 0.00 0.00 2.57
7417 7731 5.824624 CCTATGTCATGCCACTAAGTTGATT 59.175 40.000 0.00 0.00 0.00 2.57
7418 7732 5.571784 ATGTCATGCCACTAAGTTGATTG 57.428 39.130 0.00 0.00 0.00 2.67
7419 7733 4.650734 TGTCATGCCACTAAGTTGATTGA 58.349 39.130 0.00 0.00 0.00 2.57
7420 7734 5.255687 TGTCATGCCACTAAGTTGATTGAT 58.744 37.500 0.00 0.00 0.00 2.57
7421 7735 5.711506 TGTCATGCCACTAAGTTGATTGATT 59.288 36.000 0.00 0.00 0.00 2.57
7422 7736 6.883756 TGTCATGCCACTAAGTTGATTGATTA 59.116 34.615 0.00 0.00 0.00 1.75
7423 7737 7.066163 TGTCATGCCACTAAGTTGATTGATTAG 59.934 37.037 0.00 0.00 33.63 1.73
7424 7738 7.280876 GTCATGCCACTAAGTTGATTGATTAGA 59.719 37.037 0.00 0.00 32.16 2.10
7425 7739 7.994911 TCATGCCACTAAGTTGATTGATTAGAT 59.005 33.333 0.00 0.00 32.16 1.98
7426 7740 7.558161 TGCCACTAAGTTGATTGATTAGATG 57.442 36.000 0.00 0.00 32.16 2.90
7427 7741 7.112122 TGCCACTAAGTTGATTGATTAGATGT 58.888 34.615 0.00 0.00 32.16 3.06
7428 7742 7.611467 TGCCACTAAGTTGATTGATTAGATGTT 59.389 33.333 0.00 0.00 32.16 2.71
7429 7743 7.912250 GCCACTAAGTTGATTGATTAGATGTTG 59.088 37.037 0.00 0.00 32.16 3.33
7430 7744 7.912250 CCACTAAGTTGATTGATTAGATGTTGC 59.088 37.037 0.00 0.00 32.16 4.17
7431 7745 8.453320 CACTAAGTTGATTGATTAGATGTTGCA 58.547 33.333 0.00 0.00 32.16 4.08
7432 7746 9.182214 ACTAAGTTGATTGATTAGATGTTGCAT 57.818 29.630 0.00 0.00 32.16 3.96
7434 7748 8.922058 AAGTTGATTGATTAGATGTTGCATTC 57.078 30.769 0.00 0.00 0.00 2.67
7435 7749 8.289939 AGTTGATTGATTAGATGTTGCATTCT 57.710 30.769 0.00 0.00 0.00 2.40
7436 7750 8.188799 AGTTGATTGATTAGATGTTGCATTCTG 58.811 33.333 0.00 0.00 0.00 3.02
7437 7751 7.634671 TGATTGATTAGATGTTGCATTCTGT 57.365 32.000 0.00 0.00 0.00 3.41
7438 7752 8.058667 TGATTGATTAGATGTTGCATTCTGTT 57.941 30.769 0.00 0.00 0.00 3.16
7439 7753 8.525316 TGATTGATTAGATGTTGCATTCTGTTT 58.475 29.630 0.00 0.00 0.00 2.83
7440 7754 9.362539 GATTGATTAGATGTTGCATTCTGTTTT 57.637 29.630 0.00 0.00 0.00 2.43
7441 7755 9.715121 ATTGATTAGATGTTGCATTCTGTTTTT 57.285 25.926 0.00 0.00 0.00 1.94
7442 7756 8.523523 TGATTAGATGTTGCATTCTGTTTTTG 57.476 30.769 0.00 0.00 0.00 2.44
7443 7757 8.143193 TGATTAGATGTTGCATTCTGTTTTTGT 58.857 29.630 0.00 0.00 0.00 2.83
7444 7758 8.891671 ATTAGATGTTGCATTCTGTTTTTGTT 57.108 26.923 0.00 0.00 0.00 2.83
7445 7759 6.833342 AGATGTTGCATTCTGTTTTTGTTC 57.167 33.333 0.00 0.00 0.00 3.18
7446 7760 6.576185 AGATGTTGCATTCTGTTTTTGTTCT 58.424 32.000 0.00 0.00 0.00 3.01
7447 7761 7.043565 AGATGTTGCATTCTGTTTTTGTTCTT 58.956 30.769 0.00 0.00 0.00 2.52
7448 7762 7.550196 AGATGTTGCATTCTGTTTTTGTTCTTT 59.450 29.630 0.00 0.00 0.00 2.52
7449 7763 6.829703 TGTTGCATTCTGTTTTTGTTCTTTG 58.170 32.000 0.00 0.00 0.00 2.77
7450 7764 6.426328 TGTTGCATTCTGTTTTTGTTCTTTGT 59.574 30.769 0.00 0.00 0.00 2.83
7451 7765 7.041508 TGTTGCATTCTGTTTTTGTTCTTTGTT 60.042 29.630 0.00 0.00 0.00 2.83
7452 7766 7.432350 TGCATTCTGTTTTTGTTCTTTGTTT 57.568 28.000 0.00 0.00 0.00 2.83
7453 7767 7.869800 TGCATTCTGTTTTTGTTCTTTGTTTT 58.130 26.923 0.00 0.00 0.00 2.43
7454 7768 7.802251 TGCATTCTGTTTTTGTTCTTTGTTTTG 59.198 29.630 0.00 0.00 0.00 2.44
7455 7769 7.802720 GCATTCTGTTTTTGTTCTTTGTTTTGT 59.197 29.630 0.00 0.00 0.00 2.83
7456 7770 9.662545 CATTCTGTTTTTGTTCTTTGTTTTGTT 57.337 25.926 0.00 0.00 0.00 2.83
7474 7788 9.160496 TGTTTTGTTAATGAAATCAATATGCCC 57.840 29.630 0.00 0.00 0.00 5.36
7475 7789 9.160496 GTTTTGTTAATGAAATCAATATGCCCA 57.840 29.630 0.00 0.00 0.00 5.36
7476 7790 8.715191 TTTGTTAATGAAATCAATATGCCCAC 57.285 30.769 0.00 0.00 0.00 4.61
7477 7791 7.415592 TGTTAATGAAATCAATATGCCCACA 57.584 32.000 0.00 0.00 0.00 4.17
7478 7792 7.264221 TGTTAATGAAATCAATATGCCCACAC 58.736 34.615 0.00 0.00 0.00 3.82
7479 7793 5.936187 AATGAAATCAATATGCCCACACA 57.064 34.783 0.00 0.00 0.00 3.72
7480 7794 6.488769 AATGAAATCAATATGCCCACACAT 57.511 33.333 0.00 0.00 0.00 3.21
7481 7795 5.936187 TGAAATCAATATGCCCACACATT 57.064 34.783 0.00 0.00 0.00 2.71
7482 7796 5.662456 TGAAATCAATATGCCCACACATTG 58.338 37.500 0.00 0.00 0.00 2.82
7483 7797 4.675976 AATCAATATGCCCACACATTGG 57.324 40.909 0.00 0.00 46.47 3.16
7497 7811 3.924144 CACATTGGGTGGGTAACATTTG 58.076 45.455 0.00 0.00 44.04 2.32
7498 7812 3.323403 CACATTGGGTGGGTAACATTTGT 59.677 43.478 0.00 0.00 44.04 2.83
7499 7813 3.970640 ACATTGGGTGGGTAACATTTGTT 59.029 39.130 1.08 1.08 41.73 2.83
7500 7814 4.202305 ACATTGGGTGGGTAACATTTGTTG 60.202 41.667 6.21 0.00 38.90 3.33
7501 7815 2.320781 TGGGTGGGTAACATTTGTTGG 58.679 47.619 6.21 0.00 38.90 3.77
7502 7816 2.091278 TGGGTGGGTAACATTTGTTGGA 60.091 45.455 6.21 0.00 38.90 3.53
7503 7817 2.966516 GGGTGGGTAACATTTGTTGGAA 59.033 45.455 6.21 0.00 38.90 3.53
7504 7818 3.580895 GGGTGGGTAACATTTGTTGGAAT 59.419 43.478 6.21 0.00 38.90 3.01
7505 7819 4.562552 GGGTGGGTAACATTTGTTGGAATG 60.563 45.833 6.21 0.00 41.64 2.67
7506 7820 3.993736 GTGGGTAACATTTGTTGGAATGC 59.006 43.478 6.21 0.00 39.97 3.56
7507 7821 3.007398 TGGGTAACATTTGTTGGAATGCC 59.993 43.478 6.21 0.00 39.97 4.40
7508 7822 3.007398 GGGTAACATTTGTTGGAATGCCA 59.993 43.478 6.21 0.00 39.97 4.92
7509 7823 4.503991 GGGTAACATTTGTTGGAATGCCAA 60.504 41.667 0.00 0.00 46.34 4.52
7548 7862 7.761038 AAAATCCAGTAGAGTAAAAACCCAG 57.239 36.000 0.00 0.00 0.00 4.45
7549 7863 4.281898 TCCAGTAGAGTAAAAACCCAGC 57.718 45.455 0.00 0.00 0.00 4.85
7550 7864 3.008704 TCCAGTAGAGTAAAAACCCAGCC 59.991 47.826 0.00 0.00 0.00 4.85
7551 7865 3.009143 CCAGTAGAGTAAAAACCCAGCCT 59.991 47.826 0.00 0.00 0.00 4.58
7552 7866 4.254492 CAGTAGAGTAAAAACCCAGCCTC 58.746 47.826 0.00 0.00 0.00 4.70
7553 7867 2.881111 AGAGTAAAAACCCAGCCTCC 57.119 50.000 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.985538 ACTTCATGGACATGGTTAGTTGT 58.014 39.130 11.98 0.07 39.24 3.32
161 162 7.714813 TGAGCGAAACATGGAGAATATAATTCA 59.285 33.333 0.00 0.00 0.00 2.57
188 189 1.956639 TAATCGAGAGGAGGCCCCCA 61.957 60.000 5.89 0.00 34.66 4.96
330 369 5.898397 AGAGGGAGTACTATTTAGAACCCAC 59.102 44.000 13.02 7.75 38.62 4.61
425 465 6.555360 AGAGGGAGTACTATTTAGAACCCATG 59.445 42.308 13.02 0.00 38.62 3.66
458 498 4.081862 TCTCCCTGTAACAAATGTAGGACG 60.082 45.833 3.00 0.00 0.00 4.79
508 551 2.862541 TCTGGTCCAGTTGAATGGTTG 58.137 47.619 18.65 0.00 41.43 3.77
511 554 2.093500 TCGATCTGGTCCAGTTGAATGG 60.093 50.000 18.65 6.39 42.11 3.16
513 556 3.007940 TGTTCGATCTGGTCCAGTTGAAT 59.992 43.478 18.65 4.62 32.61 2.57
524 567 4.503910 TGGAGTACATTTGTTCGATCTGG 58.496 43.478 0.00 0.00 0.00 3.86
569 612 1.394618 GTCGACTGAGACCTAGCCAT 58.605 55.000 8.70 0.00 35.22 4.40
604 647 9.538508 CTTGTATGATATGTCACTTGATTGAGA 57.461 33.333 0.00 0.00 37.14 3.27
605 648 9.322773 ACTTGTATGATATGTCACTTGATTGAG 57.677 33.333 0.00 0.00 37.14 3.02
606 649 9.101655 CACTTGTATGATATGTCACTTGATTGA 57.898 33.333 0.00 0.00 37.14 2.57
607 650 9.101655 TCACTTGTATGATATGTCACTTGATTG 57.898 33.333 0.00 0.00 37.14 2.67
626 669 7.227049 TCTGTTTTTCCTTTTTCTCACTTGT 57.773 32.000 0.00 0.00 0.00 3.16
631 674 9.771534 TTTCTTTTCTGTTTTTCCTTTTTCTCA 57.228 25.926 0.00 0.00 0.00 3.27
1006 1050 4.676951 ATGTGGTTGTGGCCGGGG 62.677 66.667 2.18 0.00 0.00 5.73
1094 1142 3.600898 CTTTGACCGGACCCGACCC 62.601 68.421 9.46 0.00 42.83 4.46
1095 1143 2.047560 CTTTGACCGGACCCGACC 60.048 66.667 9.46 1.82 42.83 4.79
1355 1415 4.593864 GGACAGCTCGGATCCGGC 62.594 72.222 32.79 30.76 40.25 6.13
1378 1438 1.448365 CGCAGCAGTAGCACATGGA 60.448 57.895 0.00 0.00 45.49 3.41
1458 1519 0.249868 CCACTCCGCAAACACTGAGA 60.250 55.000 0.00 0.00 0.00 3.27
1469 1530 0.307760 CAAAGTCAACACCACTCCGC 59.692 55.000 0.00 0.00 0.00 5.54
1526 1587 3.697045 CCAAAGTCCCACTTAACAACACA 59.303 43.478 0.00 0.00 37.47 3.72
1556 1617 2.554032 GCAGAAAAACTAAGCAGCTGGA 59.446 45.455 17.12 0.00 0.00 3.86
1566 1627 7.913674 AAAATTGTTTGTGGCAGAAAAACTA 57.086 28.000 11.72 8.77 35.35 2.24
1870 1960 7.606839 CGACAGTCTATCCCAACTAGTATATCA 59.393 40.741 0.00 0.00 0.00 2.15
1886 1977 2.931325 GTCTCGACACTCGACAGTCTAT 59.069 50.000 9.92 0.00 44.82 1.98
1889 1980 0.866427 TGTCTCGACACTCGACAGTC 59.134 55.000 0.67 3.06 44.82 3.51
1899 1990 4.874396 AGTCATCTATACGTTGTCTCGACA 59.126 41.667 0.00 0.00 39.98 4.35
1900 1991 5.406767 AGTCATCTATACGTTGTCTCGAC 57.593 43.478 0.00 0.00 34.70 4.20
1901 1992 5.816258 AGAAGTCATCTATACGTTGTCTCGA 59.184 40.000 0.00 0.00 36.32 4.04
1902 1993 6.050454 AGAAGTCATCTATACGTTGTCTCG 57.950 41.667 0.00 0.00 36.32 4.04
1903 1994 8.071368 CCTAAGAAGTCATCTATACGTTGTCTC 58.929 40.741 0.00 0.00 37.42 3.36
1904 1995 7.774157 TCCTAAGAAGTCATCTATACGTTGTCT 59.226 37.037 0.00 0.00 37.42 3.41
1905 1996 7.928103 TCCTAAGAAGTCATCTATACGTTGTC 58.072 38.462 0.00 0.00 37.42 3.18
1912 2003 6.715718 CCGGTTCTCCTAAGAAGTCATCTATA 59.284 42.308 0.00 0.00 42.14 1.31
1955 2046 8.986477 AAACTGCACTTCCAAACATATAAATC 57.014 30.769 0.00 0.00 0.00 2.17
1961 2052 4.846779 GGAAACTGCACTTCCAAACATA 57.153 40.909 15.18 0.00 41.79 2.29
1975 2066 3.631686 TGGACAATGTCACTTGGAAACTG 59.368 43.478 15.86 0.00 33.68 3.16
2009 2100 5.875359 GGTAAACAGGATGGAAGAACAGTAG 59.125 44.000 0.00 0.00 43.62 2.57
2010 2101 5.546499 AGGTAAACAGGATGGAAGAACAGTA 59.454 40.000 0.00 0.00 43.62 2.74
2025 2116 6.294342 GGGCTTTGTTTAGGTAAGGTAAACAG 60.294 42.308 8.08 1.35 46.08 3.16
2050 2141 1.665679 GCCATATGTTGTGTGGACTCG 59.334 52.381 1.24 0.00 41.35 4.18
2140 2232 1.523758 GTAACAGGTTGTGAGGCCAG 58.476 55.000 5.01 0.00 0.00 4.85
2193 2315 6.930722 ACAAGCAAGGGAACAAAAATTATCAG 59.069 34.615 0.00 0.00 0.00 2.90
2198 2320 4.119136 CGACAAGCAAGGGAACAAAAATT 58.881 39.130 0.00 0.00 0.00 1.82
2243 2367 6.038936 TGCATGTCCATCAATCAACATAAGAG 59.961 38.462 0.00 0.00 31.40 2.85
2467 2591 2.532250 TGACTCTCCTCCTGTATGCA 57.468 50.000 0.00 0.00 0.00 3.96
2629 2753 2.757314 TGTTGGATGTGCAGTCAAAACA 59.243 40.909 12.00 12.00 0.00 2.83
2708 2832 9.803130 GAAATTGTATCATGACAACTATGATCG 57.197 33.333 0.00 0.00 42.58 3.69
2846 2970 1.821753 GCAGTAAGCACCTCTCTCTGA 59.178 52.381 0.00 0.00 44.79 3.27
2952 3076 7.974504 AGGTTAAGTGTAAGAAAGGATCTCAA 58.025 34.615 0.00 0.00 37.42 3.02
2983 3109 4.265073 GCAGCTTGGATCTAAAAAGGAGA 58.735 43.478 0.00 0.00 0.00 3.71
3165 3291 9.598517 GAGAATTGGATAAGAGGAGCATTATAG 57.401 37.037 0.00 0.00 0.00 1.31
3216 3342 1.134965 GGACAGAGATTCCACTCACCG 60.135 57.143 0.00 0.00 39.14 4.94
3292 3418 4.835615 AGCATCTAATAGACACCACCTAGG 59.164 45.833 7.41 7.41 45.67 3.02
3293 3419 6.490381 TGTAGCATCTAATAGACACCACCTAG 59.510 42.308 0.00 0.00 0.00 3.02
3295 3421 5.208890 TGTAGCATCTAATAGACACCACCT 58.791 41.667 0.00 0.00 0.00 4.00
3589 3725 1.464608 CAACGCCACATAGACAACTGG 59.535 52.381 0.00 0.00 0.00 4.00
3648 3784 5.105310 TGCTTAGCGTCCTTCTTAGAAGATT 60.105 40.000 22.19 6.30 34.49 2.40
3649 3785 4.402793 TGCTTAGCGTCCTTCTTAGAAGAT 59.597 41.667 22.19 6.28 34.49 2.40
3834 3972 5.607171 AGGAACCTTCTTCCAGAACTCTAAA 59.393 40.000 2.05 0.00 41.00 1.85
3835 3973 5.155905 AGGAACCTTCTTCCAGAACTCTAA 58.844 41.667 2.05 0.00 41.00 2.10
3954 4094 3.954904 GAGTAGCTTCCTCAGGTATGTCA 59.045 47.826 0.00 0.00 37.80 3.58
4032 4178 9.191995 CCAAACATAGTACCATTGAAGAAAAAC 57.808 33.333 0.00 0.00 0.00 2.43
4068 4214 8.928448 AGAGAAGACTGGCATATATTAAAGACA 58.072 33.333 0.00 0.00 0.00 3.41
4468 4614 3.760151 CTGAAGGAGATGTTGCCATTGAA 59.240 43.478 0.00 0.00 0.00 2.69
4544 4690 0.107831 TCAAACAGGGGGACAACTCG 59.892 55.000 0.00 0.00 0.00 4.18
4819 4965 2.906389 AGACAAGATGGCAAGGTGAGTA 59.094 45.455 0.00 0.00 0.00 2.59
4825 4971 1.093159 GCTGAGACAAGATGGCAAGG 58.907 55.000 0.00 0.00 0.00 3.61
4897 5043 1.681666 CTCCCCAAAGCTCTGCTCA 59.318 57.895 0.00 0.00 38.25 4.26
5017 5163 0.253894 CCACCACAGCCATCTCATCA 59.746 55.000 0.00 0.00 0.00 3.07
5059 5205 0.600255 AGCGTGGTTCTTGGAAGACG 60.600 55.000 0.00 0.00 34.13 4.18
5118 5267 9.284968 GCAGTTAATATTTTTCCTAGCCTGATA 57.715 33.333 0.00 0.00 0.00 2.15
5152 5301 8.592809 TCCAGGTTTGCAATATATTGAAAAGTT 58.407 29.630 25.71 16.50 43.85 2.66
5165 5314 2.086610 AACAGGTCCAGGTTTGCAAT 57.913 45.000 0.00 0.00 0.00 3.56
5177 5326 5.539048 TGAACTTAAGCTCACTAACAGGTC 58.461 41.667 4.43 0.00 0.00 3.85
5183 5332 6.654582 TCATTGCATGAACTTAAGCTCACTAA 59.345 34.615 10.67 7.11 36.11 2.24
5184 5333 6.172630 TCATTGCATGAACTTAAGCTCACTA 58.827 36.000 10.67 0.00 36.11 2.74
5191 5340 7.696872 CACTTCAGATCATTGCATGAACTTAAG 59.303 37.037 18.08 18.08 43.36 1.85
5193 5342 6.094464 CCACTTCAGATCATTGCATGAACTTA 59.906 38.462 0.00 0.00 43.50 2.24
5194 5343 5.105877 CCACTTCAGATCATTGCATGAACTT 60.106 40.000 0.00 0.00 43.50 2.66
5196 5345 4.397103 TCCACTTCAGATCATTGCATGAAC 59.603 41.667 0.00 0.00 43.50 3.18
5262 5413 4.083271 GCAAAAGAAGGTACCTAAGTGCTG 60.083 45.833 16.67 9.83 0.00 4.41
5295 5447 3.435275 TGGCTTCAGAGTCTGTCATACT 58.565 45.455 19.53 0.00 32.61 2.12
5296 5448 3.876274 TGGCTTCAGAGTCTGTCATAC 57.124 47.619 19.53 8.46 32.61 2.39
5297 5449 4.223700 ACATTGGCTTCAGAGTCTGTCATA 59.776 41.667 19.53 0.00 32.61 2.15
5298 5450 3.008813 ACATTGGCTTCAGAGTCTGTCAT 59.991 43.478 19.53 2.14 32.61 3.06
5299 5451 2.369860 ACATTGGCTTCAGAGTCTGTCA 59.630 45.455 19.53 11.05 32.61 3.58
5300 5452 3.051081 ACATTGGCTTCAGAGTCTGTC 57.949 47.619 19.53 10.00 32.61 3.51
5301 5453 3.498774 AACATTGGCTTCAGAGTCTGT 57.501 42.857 19.53 0.00 32.61 3.41
5302 5454 7.255035 CCAATATAACATTGGCTTCAGAGTCTG 60.255 40.741 14.36 14.36 41.62 3.51
5303 5455 6.769822 CCAATATAACATTGGCTTCAGAGTCT 59.230 38.462 3.22 0.00 41.62 3.24
5304 5456 6.963796 CCAATATAACATTGGCTTCAGAGTC 58.036 40.000 3.22 0.00 41.62 3.36
5305 5457 6.949352 CCAATATAACATTGGCTTCAGAGT 57.051 37.500 3.22 0.00 41.62 3.24
5330 5486 3.533606 ACTACTGCAATAGCCTGAGTG 57.466 47.619 1.25 0.00 41.13 3.51
5331 5487 4.956700 TCTTACTACTGCAATAGCCTGAGT 59.043 41.667 1.25 0.00 41.13 3.41
5366 5522 3.260475 AGGCACCAAGGTTTGTTTTTC 57.740 42.857 0.00 0.00 0.00 2.29
5446 5604 2.836636 TCCTGCCATACTCTGTCTCT 57.163 50.000 0.00 0.00 0.00 3.10
5485 5643 1.528129 CACTGGGCTTTCTCTTGGAC 58.472 55.000 0.00 0.00 0.00 4.02
5500 5658 2.163010 GAGTGATTCAATGCCACCACTG 59.837 50.000 0.00 0.00 35.32 3.66
5611 5769 4.104738 TGGAAGTTCCTGATGTCCTTCTTT 59.895 41.667 22.41 0.00 37.46 2.52
5831 5989 6.425577 ACAAGTGTTCTGCGTTTTAGTAAA 57.574 33.333 0.00 0.00 0.00 2.01
5849 6007 9.871238 ATTGATATTGAACGAAGTAGTACAAGT 57.129 29.630 2.52 0.00 45.00 3.16
5851 6009 8.600625 GCATTGATATTGAACGAAGTAGTACAA 58.399 33.333 2.52 0.00 45.00 2.41
5854 6012 7.269316 TGGCATTGATATTGAACGAAGTAGTA 58.731 34.615 0.00 0.00 45.00 1.82
5855 6013 6.112734 TGGCATTGATATTGAACGAAGTAGT 58.887 36.000 0.00 0.00 45.00 2.73
5856 6014 6.603237 TGGCATTGATATTGAACGAAGTAG 57.397 37.500 0.00 0.00 45.00 2.57
5869 6027 3.920231 AGAAGACTGCTGGCATTGATA 57.080 42.857 0.00 0.00 0.00 2.15
5871 6029 3.701205 TTAGAAGACTGCTGGCATTGA 57.299 42.857 0.00 0.00 0.00 2.57
5874 6032 2.040278 TGGTTTAGAAGACTGCTGGCAT 59.960 45.455 0.00 0.00 0.00 4.40
5936 6097 1.363807 GTGCCCAGCAACCTGAAAC 59.636 57.895 0.00 0.00 41.47 2.78
6083 6244 2.124151 GACAGATGGGGGCGCAAT 60.124 61.111 10.83 0.00 0.00 3.56
6084 6245 4.424711 GGACAGATGGGGGCGCAA 62.425 66.667 10.83 0.00 0.00 4.85
6310 6473 2.675032 CGCTGAGATACAAGCAAGGTCA 60.675 50.000 0.00 0.00 0.00 4.02
6312 6475 1.406069 CCGCTGAGATACAAGCAAGGT 60.406 52.381 0.00 0.00 0.00 3.50
6432 6595 5.751990 AGTGTTCCAAGTACGACTAACAAAG 59.248 40.000 7.98 0.00 29.25 2.77
6438 6601 6.389830 TGTTAAGTGTTCCAAGTACGACTA 57.610 37.500 0.00 0.00 0.00 2.59
6470 6633 1.535462 ACAAGCTTTTTCGGACGGATG 59.465 47.619 0.00 0.00 0.00 3.51
6471 6634 1.804748 GACAAGCTTTTTCGGACGGAT 59.195 47.619 0.00 0.00 0.00 4.18
6472 6635 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
6473 6636 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
6474 6637 1.226746 AGGACAAGCTTTTTCGGACG 58.773 50.000 0.00 0.00 0.00 4.79
6475 6638 2.616842 TGAAGGACAAGCTTTTTCGGAC 59.383 45.455 0.00 0.00 0.00 4.79
6476 6639 2.925724 TGAAGGACAAGCTTTTTCGGA 58.074 42.857 0.00 0.00 0.00 4.55
6477 6640 3.708563 TTGAAGGACAAGCTTTTTCGG 57.291 42.857 0.00 0.00 34.20 4.30
6478 6641 4.445385 CCATTTGAAGGACAAGCTTTTTCG 59.555 41.667 0.00 0.00 39.77 3.46
6479 6642 5.600696 TCCATTTGAAGGACAAGCTTTTTC 58.399 37.500 0.00 0.00 39.77 2.29
6480 6643 5.612725 TCCATTTGAAGGACAAGCTTTTT 57.387 34.783 0.00 0.00 39.77 1.94
6481 6644 5.070847 ACATCCATTTGAAGGACAAGCTTTT 59.929 36.000 0.00 0.00 39.77 2.27
6482 6645 4.590222 ACATCCATTTGAAGGACAAGCTTT 59.410 37.500 0.00 0.00 39.77 3.51
6483 6646 4.154942 ACATCCATTTGAAGGACAAGCTT 58.845 39.130 0.00 0.00 39.77 3.74
6484 6647 3.771216 ACATCCATTTGAAGGACAAGCT 58.229 40.909 0.00 0.00 39.77 3.74
6485 6648 5.841957 ATACATCCATTTGAAGGACAAGC 57.158 39.130 0.00 0.00 39.77 4.01
6486 6649 7.917505 GCTAAATACATCCATTTGAAGGACAAG 59.082 37.037 0.00 0.00 39.77 3.16
6487 6650 7.395772 TGCTAAATACATCCATTTGAAGGACAA 59.604 33.333 0.00 0.00 38.13 3.18
6488 6651 6.889177 TGCTAAATACATCCATTTGAAGGACA 59.111 34.615 0.00 0.00 38.13 4.02
6489 6652 7.196331 GTGCTAAATACATCCATTTGAAGGAC 58.804 38.462 0.00 0.00 38.13 3.85
6490 6653 6.321181 GGTGCTAAATACATCCATTTGAAGGA 59.679 38.462 0.00 0.00 39.97 3.36
6491 6654 6.096705 TGGTGCTAAATACATCCATTTGAAGG 59.903 38.462 0.00 0.00 30.84 3.46
6492 6655 7.099266 TGGTGCTAAATACATCCATTTGAAG 57.901 36.000 0.00 0.00 30.84 3.02
6493 6656 7.178274 ACTTGGTGCTAAATACATCCATTTGAA 59.822 33.333 0.00 0.00 30.84 2.69
6494 6657 6.663093 ACTTGGTGCTAAATACATCCATTTGA 59.337 34.615 0.00 0.00 30.84 2.69
6495 6658 6.866480 ACTTGGTGCTAAATACATCCATTTG 58.134 36.000 0.00 0.00 30.84 2.32
6496 6659 7.480760 AACTTGGTGCTAAATACATCCATTT 57.519 32.000 0.00 0.00 32.91 2.32
6497 6660 7.613801 TGTAACTTGGTGCTAAATACATCCATT 59.386 33.333 0.00 0.00 0.00 3.16
6498 6661 7.116075 TGTAACTTGGTGCTAAATACATCCAT 58.884 34.615 0.00 0.00 0.00 3.41
6499 6662 6.477253 TGTAACTTGGTGCTAAATACATCCA 58.523 36.000 0.00 0.00 0.00 3.41
6500 6663 6.995511 TGTAACTTGGTGCTAAATACATCC 57.004 37.500 0.00 0.00 0.00 3.51
6501 6664 7.282224 TGGATGTAACTTGGTGCTAAATACATC 59.718 37.037 16.51 16.51 43.47 3.06
6502 6665 7.116075 TGGATGTAACTTGGTGCTAAATACAT 58.884 34.615 0.00 0.00 35.76 2.29
6503 6666 6.477253 TGGATGTAACTTGGTGCTAAATACA 58.523 36.000 0.00 0.00 0.00 2.29
6504 6667 6.995511 TGGATGTAACTTGGTGCTAAATAC 57.004 37.500 0.00 0.00 0.00 1.89
6505 6668 8.465999 CAAATGGATGTAACTTGGTGCTAAATA 58.534 33.333 0.00 0.00 0.00 1.40
6506 6669 7.178274 TCAAATGGATGTAACTTGGTGCTAAAT 59.822 33.333 0.00 0.00 0.00 1.40
6507 6670 6.491745 TCAAATGGATGTAACTTGGTGCTAAA 59.508 34.615 0.00 0.00 0.00 1.85
6508 6671 6.007076 TCAAATGGATGTAACTTGGTGCTAA 58.993 36.000 0.00 0.00 0.00 3.09
6509 6672 5.565509 TCAAATGGATGTAACTTGGTGCTA 58.434 37.500 0.00 0.00 0.00 3.49
6510 6673 4.406456 TCAAATGGATGTAACTTGGTGCT 58.594 39.130 0.00 0.00 0.00 4.40
6511 6674 4.380867 CCTCAAATGGATGTAACTTGGTGC 60.381 45.833 0.00 0.00 0.00 5.01
6512 6675 4.158394 CCCTCAAATGGATGTAACTTGGTG 59.842 45.833 0.00 0.00 0.00 4.17
6513 6676 4.044065 TCCCTCAAATGGATGTAACTTGGT 59.956 41.667 0.00 0.00 0.00 3.67
6514 6677 4.399303 GTCCCTCAAATGGATGTAACTTGG 59.601 45.833 0.00 0.00 33.65 3.61
6515 6678 5.009631 TGTCCCTCAAATGGATGTAACTTG 58.990 41.667 0.00 0.00 33.65 3.16
6516 6679 5.255397 TGTCCCTCAAATGGATGTAACTT 57.745 39.130 0.00 0.00 33.65 2.66
6517 6680 4.927267 TGTCCCTCAAATGGATGTAACT 57.073 40.909 0.00 0.00 33.65 2.24
6518 6681 5.975693 TTTGTCCCTCAAATGGATGTAAC 57.024 39.130 0.00 0.00 40.56 2.50
6542 6705 2.629617 AGTACTCCCTTCGTCCGAAAAA 59.370 45.455 3.52 0.00 33.34 1.94
6543 6706 2.029649 CAGTACTCCCTTCGTCCGAAAA 60.030 50.000 3.52 0.00 33.34 2.29
6544 6707 1.542915 CAGTACTCCCTTCGTCCGAAA 59.457 52.381 3.52 0.00 33.34 3.46
6545 6708 1.171308 CAGTACTCCCTTCGTCCGAA 58.829 55.000 1.81 1.81 0.00 4.30
6546 6709 0.679002 CCAGTACTCCCTTCGTCCGA 60.679 60.000 0.00 0.00 0.00 4.55
6547 6710 0.679002 TCCAGTACTCCCTTCGTCCG 60.679 60.000 0.00 0.00 0.00 4.79
6548 6711 1.777941 ATCCAGTACTCCCTTCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
6549 6712 2.159085 CCAATCCAGTACTCCCTTCGTC 60.159 54.545 0.00 0.00 0.00 4.20
6550 6713 1.831736 CCAATCCAGTACTCCCTTCGT 59.168 52.381 0.00 0.00 0.00 3.85
6551 6714 1.139058 CCCAATCCAGTACTCCCTTCG 59.861 57.143 0.00 0.00 0.00 3.79
6552 6715 1.134068 GCCCAATCCAGTACTCCCTTC 60.134 57.143 0.00 0.00 0.00 3.46
6553 6716 0.919710 GCCCAATCCAGTACTCCCTT 59.080 55.000 0.00 0.00 0.00 3.95
6554 6717 0.253160 TGCCCAATCCAGTACTCCCT 60.253 55.000 0.00 0.00 0.00 4.20
6555 6718 0.846693 ATGCCCAATCCAGTACTCCC 59.153 55.000 0.00 0.00 0.00 4.30
6556 6719 2.736670 AATGCCCAATCCAGTACTCC 57.263 50.000 0.00 0.00 0.00 3.85
6557 6720 5.009010 CACATAAATGCCCAATCCAGTACTC 59.991 44.000 0.00 0.00 0.00 2.59
6558 6721 4.889409 CACATAAATGCCCAATCCAGTACT 59.111 41.667 0.00 0.00 0.00 2.73
6559 6722 4.037923 CCACATAAATGCCCAATCCAGTAC 59.962 45.833 0.00 0.00 0.00 2.73
6560 6723 4.214310 CCACATAAATGCCCAATCCAGTA 58.786 43.478 0.00 0.00 0.00 2.74
6561 6724 3.033184 CCACATAAATGCCCAATCCAGT 58.967 45.455 0.00 0.00 0.00 4.00
6562 6725 3.033184 ACCACATAAATGCCCAATCCAG 58.967 45.455 0.00 0.00 0.00 3.86
6563 6726 2.765135 CACCACATAAATGCCCAATCCA 59.235 45.455 0.00 0.00 0.00 3.41
6572 6735 2.159531 CGCACTGGACACCACATAAATG 60.160 50.000 0.00 0.00 0.00 2.32
6573 6736 2.083774 CGCACTGGACACCACATAAAT 58.916 47.619 0.00 0.00 0.00 1.40
6580 6743 2.395988 ATTCAGCGCACTGGACACCA 62.396 55.000 11.47 0.00 44.59 4.17
6581 6744 0.391130 TATTCAGCGCACTGGACACC 60.391 55.000 11.47 0.00 44.59 4.16
6647 6817 0.512952 CGCAACAGGTAAGCAGTGAC 59.487 55.000 0.00 0.00 0.00 3.67
6648 6818 0.602638 CCGCAACAGGTAAGCAGTGA 60.603 55.000 0.00 0.00 0.00 3.41
6659 6829 1.788308 CTGCAATTTCAACCGCAACAG 59.212 47.619 0.00 0.00 33.21 3.16
6734 6904 6.855836 TCCTAGAAAGCACATTTTATTGCAG 58.144 36.000 0.00 0.00 41.48 4.41
6761 6931 7.764443 GGCGATTAGATGTATATAAAGCAGGAA 59.236 37.037 10.15 0.00 0.00 3.36
6762 6932 7.093509 TGGCGATTAGATGTATATAAAGCAGGA 60.094 37.037 10.15 0.00 0.00 3.86
6763 6933 7.041721 TGGCGATTAGATGTATATAAAGCAGG 58.958 38.462 10.15 0.00 0.00 4.85
6764 6934 8.479313 TTGGCGATTAGATGTATATAAAGCAG 57.521 34.615 10.15 0.00 0.00 4.24
6765 6935 9.098355 GATTGGCGATTAGATGTATATAAAGCA 57.902 33.333 10.15 0.00 0.00 3.91
6766 6936 8.269424 CGATTGGCGATTAGATGTATATAAAGC 58.731 37.037 0.00 0.00 44.57 3.51
6767 6937 8.755941 CCGATTGGCGATTAGATGTATATAAAG 58.244 37.037 0.00 0.00 44.57 1.85
6768 6938 8.255206 ACCGATTGGCGATTAGATGTATATAAA 58.745 33.333 0.00 0.00 44.57 1.40
6769 6939 7.778083 ACCGATTGGCGATTAGATGTATATAA 58.222 34.615 0.00 0.00 44.57 0.98
6770 6940 7.342769 ACCGATTGGCGATTAGATGTATATA 57.657 36.000 0.00 0.00 44.57 0.86
6771 6941 6.222038 ACCGATTGGCGATTAGATGTATAT 57.778 37.500 0.00 0.00 44.57 0.86
6772 6942 5.654603 ACCGATTGGCGATTAGATGTATA 57.345 39.130 0.00 0.00 44.57 1.47
6773 6943 4.537135 ACCGATTGGCGATTAGATGTAT 57.463 40.909 0.00 0.00 44.57 2.29
6774 6944 4.330944 AACCGATTGGCGATTAGATGTA 57.669 40.909 0.00 0.00 44.57 2.29
6775 6945 2.910688 ACCGATTGGCGATTAGATGT 57.089 45.000 0.00 0.00 44.57 3.06
6776 6946 5.408299 TCAATAACCGATTGGCGATTAGATG 59.592 40.000 0.00 0.00 44.50 2.90
6777 6947 5.547465 TCAATAACCGATTGGCGATTAGAT 58.453 37.500 0.00 0.00 44.50 1.98
6778 6948 4.951254 TCAATAACCGATTGGCGATTAGA 58.049 39.130 0.00 0.00 44.50 2.10
6779 6949 5.666969 TTCAATAACCGATTGGCGATTAG 57.333 39.130 0.00 0.00 44.50 1.73
6780 6950 5.760743 TCATTCAATAACCGATTGGCGATTA 59.239 36.000 0.00 0.00 44.50 1.75
6781 6951 4.578516 TCATTCAATAACCGATTGGCGATT 59.421 37.500 0.00 0.00 44.50 3.34
6782 6952 4.133820 TCATTCAATAACCGATTGGCGAT 58.866 39.130 0.00 0.00 44.50 4.58
6783 6953 3.536570 TCATTCAATAACCGATTGGCGA 58.463 40.909 0.00 0.00 44.50 5.54
6784 6954 3.849645 GCTCATTCAATAACCGATTGGCG 60.850 47.826 0.00 0.00 44.50 5.69
6785 6955 3.316308 AGCTCATTCAATAACCGATTGGC 59.684 43.478 0.00 0.00 44.50 4.52
6786 6956 4.261322 CCAGCTCATTCAATAACCGATTGG 60.261 45.833 0.00 0.00 44.50 3.16
6787 6957 4.576053 TCCAGCTCATTCAATAACCGATTG 59.424 41.667 0.00 0.00 45.57 2.67
6788 6958 4.780815 TCCAGCTCATTCAATAACCGATT 58.219 39.130 0.00 0.00 0.00 3.34
6789 6959 4.422073 TCCAGCTCATTCAATAACCGAT 57.578 40.909 0.00 0.00 0.00 4.18
6790 6960 3.904800 TCCAGCTCATTCAATAACCGA 57.095 42.857 0.00 0.00 0.00 4.69
6791 6961 4.790766 GCAATCCAGCTCATTCAATAACCG 60.791 45.833 0.00 0.00 0.00 4.44
6792 6962 4.098349 TGCAATCCAGCTCATTCAATAACC 59.902 41.667 0.00 0.00 34.99 2.85
6793 6963 5.163581 ACTGCAATCCAGCTCATTCAATAAC 60.164 40.000 0.00 0.00 45.78 1.89
6794 6964 4.951715 ACTGCAATCCAGCTCATTCAATAA 59.048 37.500 0.00 0.00 45.78 1.40
6795 6965 4.337274 CACTGCAATCCAGCTCATTCAATA 59.663 41.667 0.00 0.00 45.78 1.90
6796 6966 3.130516 CACTGCAATCCAGCTCATTCAAT 59.869 43.478 0.00 0.00 45.78 2.57
6817 6987 2.948889 TTCTCCATCTCCTCTTCCCA 57.051 50.000 0.00 0.00 0.00 4.37
6866 7180 1.356059 GGGGCTTCTTTCCCTCTCTTT 59.644 52.381 0.00 0.00 43.41 2.52
6869 7183 1.610327 GGGGGCTTCTTTCCCTCTC 59.390 63.158 0.00 0.00 41.20 3.20
6883 7197 6.323737 TCTCCTATAAGAATAAGACAGGGGG 58.676 44.000 0.00 0.00 0.00 5.40
6888 7202 9.883293 TCCTCATTCTCCTATAAGAATAAGACA 57.117 33.333 0.48 0.00 42.68 3.41
6938 7252 1.956477 GATGGACAGCACAAAGGTTGT 59.044 47.619 0.00 0.00 46.75 3.32
6957 7271 2.650116 GCTCTTCTGGGTGGAGCGA 61.650 63.158 0.00 0.00 42.03 4.93
6969 7283 2.027285 AGGCTTTTCAGAGGAGCTCTTC 60.027 50.000 17.68 17.68 38.99 2.87
6993 7307 1.526464 GGGTTTCGCAACAAAATGCTG 59.474 47.619 0.00 0.00 44.21 4.41
6998 7312 2.969628 ATGTGGGTTTCGCAACAAAA 57.030 40.000 0.00 0.00 39.55 2.44
7017 7331 9.936759 TTACATGTGAACTGAATGATGTAACTA 57.063 29.630 9.11 0.00 33.49 2.24
7031 7345 6.204108 CCTACGTTTTTCCTTACATGTGAACT 59.796 38.462 9.11 0.00 0.00 3.01
7034 7348 5.467399 CACCTACGTTTTTCCTTACATGTGA 59.533 40.000 9.11 0.00 0.00 3.58
7081 7395 3.957671 CCAACATCATGGTCATCTTCG 57.042 47.619 0.00 0.00 35.65 3.79
7193 7507 3.137176 ACTTAGTGGCATGACATAGGCAT 59.863 43.478 3.50 8.39 42.48 4.40
7194 7508 2.505407 ACTTAGTGGCATGACATAGGCA 59.495 45.455 3.50 9.12 37.96 4.75
7195 7509 3.199880 ACTTAGTGGCATGACATAGGC 57.800 47.619 3.50 0.00 34.76 3.93
7196 7510 4.769688 TCAACTTAGTGGCATGACATAGG 58.230 43.478 3.50 1.57 0.00 2.57
7197 7511 6.539826 TCAATCAACTTAGTGGCATGACATAG 59.460 38.462 3.50 5.60 0.00 2.23
7198 7512 6.413892 TCAATCAACTTAGTGGCATGACATA 58.586 36.000 3.50 0.00 0.00 2.29
7199 7513 5.255687 TCAATCAACTTAGTGGCATGACAT 58.744 37.500 3.50 0.00 0.00 3.06
7200 7514 4.650734 TCAATCAACTTAGTGGCATGACA 58.349 39.130 0.00 0.00 0.00 3.58
7201 7515 5.824904 ATCAATCAACTTAGTGGCATGAC 57.175 39.130 0.00 0.00 0.00 3.06
7202 7516 7.337938 TCTAATCAATCAACTTAGTGGCATGA 58.662 34.615 0.00 0.00 0.00 3.07
7203 7517 7.558161 TCTAATCAATCAACTTAGTGGCATG 57.442 36.000 0.00 0.00 0.00 4.06
7204 7518 7.776969 ACATCTAATCAATCAACTTAGTGGCAT 59.223 33.333 0.00 0.00 0.00 4.40
7205 7519 7.112122 ACATCTAATCAATCAACTTAGTGGCA 58.888 34.615 0.00 0.00 0.00 4.92
7206 7520 7.559590 ACATCTAATCAATCAACTTAGTGGC 57.440 36.000 0.00 0.00 0.00 5.01
7207 7521 7.912250 GCAACATCTAATCAATCAACTTAGTGG 59.088 37.037 0.00 0.00 0.00 4.00
7208 7522 8.453320 TGCAACATCTAATCAATCAACTTAGTG 58.547 33.333 0.00 0.00 0.00 2.74
7209 7523 8.565896 TGCAACATCTAATCAATCAACTTAGT 57.434 30.769 0.00 0.00 0.00 2.24
7212 7526 9.715121 AAAATGCAACATCTAATCAATCAACTT 57.285 25.926 0.00 0.00 0.00 2.66
7213 7527 9.146984 CAAAATGCAACATCTAATCAATCAACT 57.853 29.630 0.00 0.00 0.00 3.16
7214 7528 8.928733 ACAAAATGCAACATCTAATCAATCAAC 58.071 29.630 0.00 0.00 0.00 3.18
7215 7529 9.491675 AACAAAATGCAACATCTAATCAATCAA 57.508 25.926 0.00 0.00 0.00 2.57
7216 7530 9.491675 AAACAAAATGCAACATCTAATCAATCA 57.508 25.926 0.00 0.00 0.00 2.57
7219 7533 9.932699 CAAAAACAAAATGCAACATCTAATCAA 57.067 25.926 0.00 0.00 0.00 2.57
7220 7534 9.107177 ACAAAAACAAAATGCAACATCTAATCA 57.893 25.926 0.00 0.00 0.00 2.57
7221 7535 9.934190 AACAAAAACAAAATGCAACATCTAATC 57.066 25.926 0.00 0.00 0.00 1.75
7222 7536 9.934190 GAACAAAAACAAAATGCAACATCTAAT 57.066 25.926 0.00 0.00 0.00 1.73
7223 7537 9.160496 AGAACAAAAACAAAATGCAACATCTAA 57.840 25.926 0.00 0.00 0.00 2.10
7224 7538 8.715191 AGAACAAAAACAAAATGCAACATCTA 57.285 26.923 0.00 0.00 0.00 1.98
7225 7539 7.614124 AGAACAAAAACAAAATGCAACATCT 57.386 28.000 0.00 0.00 0.00 2.90
7226 7540 8.577110 CAAAGAACAAAAACAAAATGCAACATC 58.423 29.630 0.00 0.00 0.00 3.06
7227 7541 8.081025 ACAAAGAACAAAAACAAAATGCAACAT 58.919 25.926 0.00 0.00 0.00 2.71
7228 7542 7.420800 ACAAAGAACAAAAACAAAATGCAACA 58.579 26.923 0.00 0.00 0.00 3.33
7229 7543 7.850268 ACAAAGAACAAAAACAAAATGCAAC 57.150 28.000 0.00 0.00 0.00 4.17
7230 7544 8.862550 AAACAAAGAACAAAAACAAAATGCAA 57.137 23.077 0.00 0.00 0.00 4.08
7231 7545 8.749499 CAAAACAAAGAACAAAAACAAAATGCA 58.251 25.926 0.00 0.00 0.00 3.96
7232 7546 8.750416 ACAAAACAAAGAACAAAAACAAAATGC 58.250 25.926 0.00 0.00 0.00 3.56
7251 7565 9.160496 GGGCATATTGATTTCATTAACAAAACA 57.840 29.630 0.00 0.00 0.00 2.83
7287 7601 5.053145 GGCATTCCAACAAATGTTACACAA 58.947 37.500 0.00 0.00 38.60 3.33
7288 7602 4.100035 TGGCATTCCAACAAATGTTACACA 59.900 37.500 0.00 0.00 39.99 3.72
7334 7648 4.291249 TGGAGGCTGGGTTTTTACTCTAAT 59.709 41.667 0.00 0.00 0.00 1.73
7335 7649 3.653836 TGGAGGCTGGGTTTTTACTCTAA 59.346 43.478 0.00 0.00 0.00 2.10
7352 7666 1.952296 GCATGTAGAGCCAATTGGAGG 59.048 52.381 29.02 8.75 37.39 4.30
7354 7668 4.502105 TTAGCATGTAGAGCCAATTGGA 57.498 40.909 29.02 6.18 37.39 3.53
7359 7673 9.440773 CATCTAATATTTAGCATGTAGAGCCAA 57.559 33.333 0.00 0.00 0.00 4.52
7360 7674 8.597167 ACATCTAATATTTAGCATGTAGAGCCA 58.403 33.333 0.00 0.00 0.00 4.75
7361 7675 9.442047 AACATCTAATATTTAGCATGTAGAGCC 57.558 33.333 0.00 0.00 0.00 4.70
7364 7678 9.777297 TGCAACATCTAATATTTAGCATGTAGA 57.223 29.630 0.00 0.00 0.00 2.59
7369 7683 7.177921 AGGCATGCAACATCTAATATTTAGCAT 59.822 33.333 21.36 0.00 40.43 3.79
7370 7684 6.491062 AGGCATGCAACATCTAATATTTAGCA 59.509 34.615 21.36 0.00 0.00 3.49
7371 7685 6.917533 AGGCATGCAACATCTAATATTTAGC 58.082 36.000 21.36 0.00 0.00 3.09
7372 7686 9.999009 CATAGGCATGCAACATCTAATATTTAG 57.001 33.333 21.36 0.00 0.00 1.85
7373 7687 9.519191 ACATAGGCATGCAACATCTAATATTTA 57.481 29.630 21.36 0.00 35.39 1.40
7374 7688 8.413309 ACATAGGCATGCAACATCTAATATTT 57.587 30.769 21.36 0.00 35.39 1.40
7375 7689 7.666804 TGACATAGGCATGCAACATCTAATATT 59.333 33.333 21.36 0.00 35.39 1.28
7376 7690 7.170277 TGACATAGGCATGCAACATCTAATAT 58.830 34.615 21.36 1.43 35.39 1.28
7377 7691 6.532826 TGACATAGGCATGCAACATCTAATA 58.467 36.000 21.36 0.00 35.39 0.98
7378 7692 5.379187 TGACATAGGCATGCAACATCTAAT 58.621 37.500 21.36 4.15 35.39 1.73
7379 7693 4.779696 TGACATAGGCATGCAACATCTAA 58.220 39.130 21.36 0.00 35.39 2.10
7380 7694 4.420522 TGACATAGGCATGCAACATCTA 57.579 40.909 21.36 11.41 35.39 1.98
7381 7695 3.286329 TGACATAGGCATGCAACATCT 57.714 42.857 21.36 9.37 35.39 2.90
7382 7696 3.897325 CATGACATAGGCATGCAACATC 58.103 45.455 21.36 10.34 37.00 3.06
7389 7703 1.977056 AGTGGCATGACATAGGCATG 58.023 50.000 3.50 8.45 44.52 4.06
7390 7704 3.137176 ACTTAGTGGCATGACATAGGCAT 59.863 43.478 3.50 8.39 42.48 4.40
7391 7705 2.505407 ACTTAGTGGCATGACATAGGCA 59.495 45.455 3.50 9.12 37.96 4.75
7392 7706 3.199880 ACTTAGTGGCATGACATAGGC 57.800 47.619 3.50 0.00 34.76 3.93
7393 7707 4.769688 TCAACTTAGTGGCATGACATAGG 58.230 43.478 3.50 1.57 0.00 2.57
7394 7708 6.539826 TCAATCAACTTAGTGGCATGACATAG 59.460 38.462 3.50 5.60 0.00 2.23
7395 7709 6.413892 TCAATCAACTTAGTGGCATGACATA 58.586 36.000 3.50 0.00 0.00 2.29
7396 7710 5.255687 TCAATCAACTTAGTGGCATGACAT 58.744 37.500 3.50 0.00 0.00 3.06
7397 7711 4.650734 TCAATCAACTTAGTGGCATGACA 58.349 39.130 0.00 0.00 0.00 3.58
7398 7712 5.824904 ATCAATCAACTTAGTGGCATGAC 57.175 39.130 0.00 0.00 0.00 3.06
7399 7713 7.337938 TCTAATCAATCAACTTAGTGGCATGA 58.662 34.615 0.00 0.00 0.00 3.07
7400 7714 7.558161 TCTAATCAATCAACTTAGTGGCATG 57.442 36.000 0.00 0.00 0.00 4.06
7401 7715 7.776969 ACATCTAATCAATCAACTTAGTGGCAT 59.223 33.333 0.00 0.00 0.00 4.40
7402 7716 7.112122 ACATCTAATCAATCAACTTAGTGGCA 58.888 34.615 0.00 0.00 0.00 4.92
7403 7717 7.559590 ACATCTAATCAATCAACTTAGTGGC 57.440 36.000 0.00 0.00 0.00 5.01
7404 7718 7.912250 GCAACATCTAATCAATCAACTTAGTGG 59.088 37.037 0.00 0.00 0.00 4.00
7405 7719 8.453320 TGCAACATCTAATCAATCAACTTAGTG 58.547 33.333 0.00 0.00 0.00 2.74
7406 7720 8.565896 TGCAACATCTAATCAATCAACTTAGT 57.434 30.769 0.00 0.00 0.00 2.24
7409 7723 8.746530 AGAATGCAACATCTAATCAATCAACTT 58.253 29.630 0.00 0.00 0.00 2.66
7410 7724 8.188799 CAGAATGCAACATCTAATCAATCAACT 58.811 33.333 0.00 0.00 0.00 3.16
7411 7725 7.972277 ACAGAATGCAACATCTAATCAATCAAC 59.028 33.333 0.00 0.00 42.53 3.18
7412 7726 8.058667 ACAGAATGCAACATCTAATCAATCAA 57.941 30.769 0.00 0.00 42.53 2.57
7413 7727 7.634671 ACAGAATGCAACATCTAATCAATCA 57.365 32.000 0.00 0.00 42.53 2.57
7414 7728 8.922058 AAACAGAATGCAACATCTAATCAATC 57.078 30.769 0.00 0.00 42.53 2.67
7415 7729 9.715121 AAAAACAGAATGCAACATCTAATCAAT 57.285 25.926 0.00 0.00 42.53 2.57
7416 7730 8.980610 CAAAAACAGAATGCAACATCTAATCAA 58.019 29.630 0.00 0.00 42.53 2.57
7417 7731 8.143193 ACAAAAACAGAATGCAACATCTAATCA 58.857 29.630 0.00 0.00 42.53 2.57
7418 7732 8.524870 ACAAAAACAGAATGCAACATCTAATC 57.475 30.769 0.00 0.00 42.53 1.75
7419 7733 8.891671 AACAAAAACAGAATGCAACATCTAAT 57.108 26.923 0.00 0.00 42.53 1.73
7420 7734 8.196771 AGAACAAAAACAGAATGCAACATCTAA 58.803 29.630 0.00 0.00 42.53 2.10
7421 7735 7.715657 AGAACAAAAACAGAATGCAACATCTA 58.284 30.769 0.00 0.00 42.53 1.98
7422 7736 6.576185 AGAACAAAAACAGAATGCAACATCT 58.424 32.000 0.00 0.00 42.53 2.90
7423 7737 6.833342 AGAACAAAAACAGAATGCAACATC 57.167 33.333 0.00 0.00 42.53 3.06
7424 7738 7.119553 ACAAAGAACAAAAACAGAATGCAACAT 59.880 29.630 0.00 0.00 42.53 2.71
7425 7739 6.426328 ACAAAGAACAAAAACAGAATGCAACA 59.574 30.769 0.00 0.00 42.53 3.33
7426 7740 6.830736 ACAAAGAACAAAAACAGAATGCAAC 58.169 32.000 0.00 0.00 42.53 4.17
7427 7741 7.432350 AACAAAGAACAAAAACAGAATGCAA 57.568 28.000 0.00 0.00 42.53 4.08
7428 7742 7.432350 AAACAAAGAACAAAAACAGAATGCA 57.568 28.000 0.00 0.00 42.53 3.96
7429 7743 7.802720 ACAAAACAAAGAACAAAAACAGAATGC 59.197 29.630 0.00 0.00 42.53 3.56
7430 7744 9.662545 AACAAAACAAAGAACAAAAACAGAATG 57.337 25.926 0.00 0.00 46.00 2.67
7448 7762 9.160496 GGGCATATTGATTTCATTAACAAAACA 57.840 29.630 0.00 0.00 0.00 2.83
7449 7763 9.160496 TGGGCATATTGATTTCATTAACAAAAC 57.840 29.630 0.00 0.00 0.00 2.43
7450 7764 9.160496 GTGGGCATATTGATTTCATTAACAAAA 57.840 29.630 0.00 0.00 0.00 2.44
7451 7765 8.316946 TGTGGGCATATTGATTTCATTAACAAA 58.683 29.630 0.00 0.00 0.00 2.83
7452 7766 7.763528 GTGTGGGCATATTGATTTCATTAACAA 59.236 33.333 0.00 0.00 0.00 2.83
7453 7767 7.093596 TGTGTGGGCATATTGATTTCATTAACA 60.094 33.333 0.00 0.00 0.00 2.41
7454 7768 7.264221 TGTGTGGGCATATTGATTTCATTAAC 58.736 34.615 0.00 0.00 0.00 2.01
7455 7769 7.415592 TGTGTGGGCATATTGATTTCATTAA 57.584 32.000 0.00 0.00 0.00 1.40
7456 7770 7.600231 ATGTGTGGGCATATTGATTTCATTA 57.400 32.000 0.00 0.00 0.00 1.90
7457 7771 5.936187 TGTGTGGGCATATTGATTTCATT 57.064 34.783 0.00 0.00 0.00 2.57
7458 7772 6.488769 AATGTGTGGGCATATTGATTTCAT 57.511 33.333 0.00 0.00 35.54 2.57
7459 7773 5.936187 AATGTGTGGGCATATTGATTTCA 57.064 34.783 0.00 0.00 35.54 2.69
7474 7788 1.988293 TGTTACCCACCCAATGTGTG 58.012 50.000 0.00 0.00 43.85 3.82
7475 7789 2.990740 ATGTTACCCACCCAATGTGT 57.009 45.000 0.00 0.00 43.85 3.72
7476 7790 3.323403 ACAAATGTTACCCACCCAATGTG 59.677 43.478 0.00 0.00 45.01 3.21
7477 7791 3.582164 ACAAATGTTACCCACCCAATGT 58.418 40.909 0.00 0.00 0.00 2.71
7478 7792 4.314121 CAACAAATGTTACCCACCCAATG 58.686 43.478 0.00 0.00 36.32 2.82
7479 7793 3.326297 CCAACAAATGTTACCCACCCAAT 59.674 43.478 0.00 0.00 36.32 3.16
7480 7794 2.700897 CCAACAAATGTTACCCACCCAA 59.299 45.455 0.00 0.00 36.32 4.12
7481 7795 2.091278 TCCAACAAATGTTACCCACCCA 60.091 45.455 0.00 0.00 36.32 4.51
7482 7796 2.599677 TCCAACAAATGTTACCCACCC 58.400 47.619 0.00 0.00 36.32 4.61
7483 7797 4.565022 CATTCCAACAAATGTTACCCACC 58.435 43.478 0.00 0.00 36.32 4.61
7484 7798 3.993736 GCATTCCAACAAATGTTACCCAC 59.006 43.478 0.00 0.00 38.60 4.61
7485 7799 3.007398 GGCATTCCAACAAATGTTACCCA 59.993 43.478 0.00 0.00 38.60 4.51
7486 7800 3.007398 TGGCATTCCAACAAATGTTACCC 59.993 43.478 0.00 0.00 39.99 3.69
7487 7801 4.264460 TGGCATTCCAACAAATGTTACC 57.736 40.909 0.00 0.00 39.99 2.85
7523 7837 7.255836 GCTGGGTTTTTACTCTACTGGATTTTT 60.256 37.037 0.00 0.00 0.00 1.94
7524 7838 6.208797 GCTGGGTTTTTACTCTACTGGATTTT 59.791 38.462 0.00 0.00 0.00 1.82
7525 7839 5.710567 GCTGGGTTTTTACTCTACTGGATTT 59.289 40.000 0.00 0.00 0.00 2.17
7526 7840 5.254115 GCTGGGTTTTTACTCTACTGGATT 58.746 41.667 0.00 0.00 0.00 3.01
7527 7841 4.324331 GGCTGGGTTTTTACTCTACTGGAT 60.324 45.833 0.00 0.00 0.00 3.41
7528 7842 3.008704 GGCTGGGTTTTTACTCTACTGGA 59.991 47.826 0.00 0.00 0.00 3.86
7529 7843 3.009143 AGGCTGGGTTTTTACTCTACTGG 59.991 47.826 0.00 0.00 0.00 4.00
7530 7844 4.254492 GAGGCTGGGTTTTTACTCTACTG 58.746 47.826 0.00 0.00 0.00 2.74
7531 7845 3.263681 GGAGGCTGGGTTTTTACTCTACT 59.736 47.826 0.00 0.00 0.00 2.57
7532 7846 3.008704 TGGAGGCTGGGTTTTTACTCTAC 59.991 47.826 0.00 0.00 0.00 2.59
7533 7847 3.253220 TGGAGGCTGGGTTTTTACTCTA 58.747 45.455 0.00 0.00 0.00 2.43
7534 7848 2.062636 TGGAGGCTGGGTTTTTACTCT 58.937 47.619 0.00 0.00 0.00 3.24
7535 7849 2.579410 TGGAGGCTGGGTTTTTACTC 57.421 50.000 0.00 0.00 0.00 2.59
7536 7850 3.542969 ATTGGAGGCTGGGTTTTTACT 57.457 42.857 0.00 0.00 0.00 2.24
7537 7851 3.306710 CCAATTGGAGGCTGGGTTTTTAC 60.307 47.826 20.50 0.00 37.39 2.01
7538 7852 2.903135 CCAATTGGAGGCTGGGTTTTTA 59.097 45.455 20.50 0.00 37.39 1.52
7539 7853 1.699083 CCAATTGGAGGCTGGGTTTTT 59.301 47.619 20.50 0.00 37.39 1.94
7540 7854 1.351076 CCAATTGGAGGCTGGGTTTT 58.649 50.000 20.50 0.00 37.39 2.43
7541 7855 3.071671 CCAATTGGAGGCTGGGTTT 57.928 52.632 20.50 0.00 37.39 3.27
7542 7856 4.872293 CCAATTGGAGGCTGGGTT 57.128 55.556 20.50 0.00 37.39 4.11
7549 7863 3.565764 TCATGTAGAGCCAATTGGAGG 57.434 47.619 29.02 7.80 37.39 4.30
7550 7864 6.461110 AAAATCATGTAGAGCCAATTGGAG 57.539 37.500 29.02 2.70 37.39 3.86
7551 7865 6.436847 TGAAAAATCATGTAGAGCCAATTGGA 59.563 34.615 29.02 6.18 37.39 3.53
7552 7866 6.632909 TGAAAAATCATGTAGAGCCAATTGG 58.367 36.000 20.81 20.81 38.53 3.16
7553 7867 6.755141 CCTGAAAAATCATGTAGAGCCAATTG 59.245 38.462 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.