Multiple sequence alignment - TraesCS5B01G177700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G177700 chr5B 100.000 2744 0 0 1 2744 324391145 324388402 0.000000e+00 5068.0
1 TraesCS5B01G177700 chr5B 91.919 792 64 0 841 1632 57024632 57025423 0.000000e+00 1109.0
2 TraesCS5B01G177700 chr5B 95.910 489 20 0 1957 2445 706893110 706892622 0.000000e+00 793.0
3 TraesCS5B01G177700 chr5B 96.321 299 11 0 2446 2744 324381347 324381049 2.460000e-135 492.0
4 TraesCS5B01G177700 chr5B 92.793 333 23 1 1625 1956 57081636 57081968 5.310000e-132 481.0
5 TraesCS5B01G177700 chr5B 90.977 133 9 3 1 130 244053914 244054046 2.810000e-40 176.0
6 TraesCS5B01G177700 chr7A 87.319 1246 137 14 722 1956 324960041 324958806 0.000000e+00 1406.0
7 TraesCS5B01G177700 chr7A 100.000 29 0 0 409 437 4998242 4998270 1.000000e-03 54.7
8 TraesCS5B01G177700 chr5D 83.562 1241 187 14 724 1954 531969315 531968082 0.000000e+00 1146.0
9 TraesCS5B01G177700 chr5D 81.271 598 63 24 103 681 286166418 286165851 3.240000e-119 438.0
10 TraesCS5B01G177700 chr5D 94.017 117 5 2 1 116 32581221 32581106 2.810000e-40 176.0
11 TraesCS5B01G177700 chr5D 86.364 66 9 0 1111 1176 362207568 362207633 3.790000e-09 73.1
12 TraesCS5B01G177700 chr1B 95.943 493 20 0 1953 2445 139975110 139975602 0.000000e+00 800.0
13 TraesCS5B01G177700 chr1B 92.871 533 35 3 1949 2478 406959538 406960070 0.000000e+00 771.0
14 TraesCS5B01G177700 chr1B 94.408 304 12 2 2446 2744 620291345 620291042 1.930000e-126 462.0
15 TraesCS5B01G177700 chr1B 94.408 304 12 2 2446 2744 620299264 620298961 1.930000e-126 462.0
16 TraesCS5B01G177700 chr1B 98.165 109 2 0 1 109 171525324 171525216 1.000000e-44 191.0
17 TraesCS5B01G177700 chr1B 91.489 141 6 5 1 138 69082217 69082354 3.610000e-44 189.0
18 TraesCS5B01G177700 chr1B 94.262 122 6 1 1 122 168099694 168099814 4.670000e-43 185.0
19 TraesCS5B01G177700 chr1B 94.958 119 5 1 1 118 368180001 368180119 4.670000e-43 185.0
20 TraesCS5B01G177700 chr1B 94.958 119 3 2 1 119 278284302 278284187 1.680000e-42 183.0
21 TraesCS5B01G177700 chr1B 92.188 128 6 4 1 127 98306929 98306805 7.810000e-41 178.0
22 TraesCS5B01G177700 chr2B 95.918 490 19 1 1957 2445 458796602 458796113 0.000000e+00 793.0
23 TraesCS5B01G177700 chr2B 94.667 300 16 0 2445 2744 296170858 296170559 1.490000e-127 466.0
24 TraesCS5B01G177700 chr2B 94.333 300 17 0 2445 2744 340135755 340136054 6.920000e-126 460.0
25 TraesCS5B01G177700 chr3B 95.382 498 22 1 1949 2445 108972438 108972935 0.000000e+00 791.0
26 TraesCS5B01G177700 chr3B 93.321 524 33 2 1957 2478 594721488 594722011 0.000000e+00 773.0
27 TraesCS5B01G177700 chr3B 94.649 299 16 0 2446 2744 636162600 636162302 5.350000e-127 464.0
28 TraesCS5B01G177700 chr3B 74.444 720 169 13 916 1629 591461448 591462158 2.070000e-76 296.0
29 TraesCS5B01G177700 chr3B 97.297 111 3 0 1 111 778523789 778523899 3.610000e-44 189.0
30 TraesCS5B01G177700 chr7B 92.683 533 36 3 1949 2478 32425523 32424991 0.000000e+00 765.0
31 TraesCS5B01G177700 chr7B 94.371 302 15 2 2444 2744 478489410 478489710 1.930000e-126 462.0
32 TraesCS5B01G177700 chr7B 74.588 728 174 9 999 1721 242666972 242667693 2.650000e-80 309.0
33 TraesCS5B01G177700 chr7B 93.651 126 5 3 1 124 25562562 25562686 4.670000e-43 185.0
34 TraesCS5B01G177700 chr4B 92.683 533 36 3 1949 2478 595775451 595774919 0.000000e+00 765.0
35 TraesCS5B01G177700 chr4B 92.365 537 38 3 1944 2478 641984009 641983474 0.000000e+00 761.0
36 TraesCS5B01G177700 chr4B 94.649 299 16 0 2446 2744 585232470 585232172 5.350000e-127 464.0
37 TraesCS5B01G177700 chr4B 99.057 106 1 0 1 106 12392830 12392725 1.000000e-44 191.0
38 TraesCS5B01G177700 chr4B 99.048 105 1 0 1 105 390004535 390004431 3.610000e-44 189.0
39 TraesCS5B01G177700 chr4B 96.460 113 4 0 1 113 277887880 277887768 1.300000e-43 187.0
40 TraesCS5B01G177700 chr4B 97.273 110 3 0 1 110 371638175 371638284 1.300000e-43 187.0
41 TraesCS5B01G177700 chr4B 94.167 120 6 1 1 120 214657896 214657778 6.040000e-42 182.0
42 TraesCS5B01G177700 chr4B 92.188 128 7 3 1 126 366411822 366411696 7.810000e-41 178.0
43 TraesCS5B01G177700 chr5A 91.182 499 40 3 1461 1956 567213002 567212505 0.000000e+00 675.0
44 TraesCS5B01G177700 chr6B 94.649 299 16 0 2446 2744 511035174 511034876 5.350000e-127 464.0
45 TraesCS5B01G177700 chrUn 99.065 107 1 0 1 107 295896379 295896273 2.790000e-45 193.0
46 TraesCS5B01G177700 chrUn 99.038 104 1 0 1 104 8319309 8319206 1.300000e-43 187.0
47 TraesCS5B01G177700 chrUn 99.038 104 1 0 1 104 413067814 413067711 1.300000e-43 187.0
48 TraesCS5B01G177700 chrUn 98.095 105 2 0 1 105 28534597 28534701 1.680000e-42 183.0
49 TraesCS5B01G177700 chrUn 98.077 104 2 0 1 104 7760262 7760159 6.040000e-42 182.0
50 TraesCS5B01G177700 chrUn 98.077 104 2 0 1 104 21340689 21340792 6.040000e-42 182.0
51 TraesCS5B01G177700 chrUn 98.077 104 2 0 1 104 30511212 30511315 6.040000e-42 182.0
52 TraesCS5B01G177700 chrUn 98.077 104 2 0 1 104 65025203 65025100 6.040000e-42 182.0
53 TraesCS5B01G177700 chrUn 98.077 104 2 0 1 104 66247214 66247111 6.040000e-42 182.0
54 TraesCS5B01G177700 chrUn 96.364 110 4 0 1 110 471090342 471090233 6.040000e-42 182.0
55 TraesCS5B01G177700 chrUn 93.548 124 3 5 1 120 299666145 299666023 2.170000e-41 180.0
56 TraesCS5B01G177700 chrUn 97.170 106 3 0 1 106 315634314 315634419 2.170000e-41 180.0
57 TraesCS5B01G177700 chr4A 96.522 115 2 2 1 114 692281697 692281584 3.610000e-44 189.0
58 TraesCS5B01G177700 chr4A 95.763 118 2 3 1 117 657231167 657231052 1.300000e-43 187.0
59 TraesCS5B01G177700 chr1A 97.273 110 2 1 1 109 372818612 372818721 4.670000e-43 185.0
60 TraesCS5B01G177700 chr1A 93.388 121 4 4 1 120 18808875 18808992 2.810000e-40 176.0
61 TraesCS5B01G177700 chr1A 93.388 121 4 4 1 120 18984576 18984693 2.810000e-40 176.0
62 TraesCS5B01G177700 chr6D 95.536 112 5 0 1 112 112198198 112198087 2.170000e-41 180.0
63 TraesCS5B01G177700 chr6D 96.330 109 4 0 1 109 256551520 256551628 2.170000e-41 180.0
64 TraesCS5B01G177700 chr3D 98.058 103 2 0 1 103 41528189 41528291 2.170000e-41 180.0
65 TraesCS5B01G177700 chr3D 90.769 130 9 3 1 130 308353301 308353175 1.310000e-38 171.0
66 TraesCS5B01G177700 chr4D 91.473 129 9 2 1 129 105949688 105949562 2.810000e-40 176.0
67 TraesCS5B01G177700 chr7D 92.126 127 4 4 1 125 632289383 632289261 1.010000e-39 174.0
68 TraesCS5B01G177700 chr3A 79.545 176 36 0 1503 1678 505608299 505608474 2.870000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G177700 chr5B 324388402 324391145 2743 True 5068 5068 100.000 1 2744 1 chr5B.!!$R2 2743
1 TraesCS5B01G177700 chr5B 57024632 57025423 791 False 1109 1109 91.919 841 1632 1 chr5B.!!$F1 791
2 TraesCS5B01G177700 chr7A 324958806 324960041 1235 True 1406 1406 87.319 722 1956 1 chr7A.!!$R1 1234
3 TraesCS5B01G177700 chr5D 531968082 531969315 1233 True 1146 1146 83.562 724 1954 1 chr5D.!!$R3 1230
4 TraesCS5B01G177700 chr5D 286165851 286166418 567 True 438 438 81.271 103 681 1 chr5D.!!$R2 578
5 TraesCS5B01G177700 chr1B 406959538 406960070 532 False 771 771 92.871 1949 2478 1 chr1B.!!$F5 529
6 TraesCS5B01G177700 chr3B 594721488 594722011 523 False 773 773 93.321 1957 2478 1 chr3B.!!$F3 521
7 TraesCS5B01G177700 chr3B 591461448 591462158 710 False 296 296 74.444 916 1629 1 chr3B.!!$F2 713
8 TraesCS5B01G177700 chr7B 32424991 32425523 532 True 765 765 92.683 1949 2478 1 chr7B.!!$R1 529
9 TraesCS5B01G177700 chr7B 242666972 242667693 721 False 309 309 74.588 999 1721 1 chr7B.!!$F2 722
10 TraesCS5B01G177700 chr4B 595774919 595775451 532 True 765 765 92.683 1949 2478 1 chr4B.!!$R7 529
11 TraesCS5B01G177700 chr4B 641983474 641984009 535 True 761 761 92.365 1944 2478 1 chr4B.!!$R8 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 0.037975 CTTGCAGGCCCAACAATGTC 60.038 55.0 0.0 0.0 0.00 3.06 F
132 133 0.248702 GATCACCTCGTTCTCCGCTC 60.249 60.0 0.0 0.0 36.19 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1309 1335 0.179067 TGAACCGTCGAAGGCTTTGT 60.179 50.0 17.91 0.0 33.69 2.83 R
1852 1881 0.612744 AAGAGAGCTTCTGGTCAGGC 59.387 55.0 0.00 0.0 42.66 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.840651 ACCTTAGGTCATCCACTTGAGG 59.159 50.000 0.00 0.00 35.89 3.86
22 23 2.171448 CCTTAGGTCATCCACTTGAGGG 59.829 54.545 0.00 0.00 35.89 4.30
23 24 2.940514 TAGGTCATCCACTTGAGGGA 57.059 50.000 0.00 0.00 39.14 4.20
24 25 2.044793 AGGTCATCCACTTGAGGGAA 57.955 50.000 0.00 0.00 38.09 3.97
25 26 2.348472 AGGTCATCCACTTGAGGGAAA 58.652 47.619 0.00 0.00 38.09 3.13
26 27 2.922283 AGGTCATCCACTTGAGGGAAAT 59.078 45.455 0.00 0.00 38.09 2.17
27 28 3.334881 AGGTCATCCACTTGAGGGAAATT 59.665 43.478 0.00 0.00 38.09 1.82
28 29 4.089361 GGTCATCCACTTGAGGGAAATTT 58.911 43.478 0.00 0.00 38.09 1.82
29 30 4.082026 GGTCATCCACTTGAGGGAAATTTG 60.082 45.833 0.00 0.00 38.09 2.32
30 31 3.511146 TCATCCACTTGAGGGAAATTTGC 59.489 43.478 0.22 0.22 38.09 3.68
31 32 3.243359 TCCACTTGAGGGAAATTTGCT 57.757 42.857 9.70 0.00 0.00 3.91
32 33 4.380843 TCCACTTGAGGGAAATTTGCTA 57.619 40.909 9.70 0.00 0.00 3.49
33 34 4.079253 TCCACTTGAGGGAAATTTGCTAC 58.921 43.478 9.70 4.95 0.00 3.58
34 35 4.082125 CCACTTGAGGGAAATTTGCTACT 58.918 43.478 9.70 0.00 0.00 2.57
35 36 4.082571 CCACTTGAGGGAAATTTGCTACTG 60.083 45.833 9.70 0.26 0.00 2.74
36 37 4.520492 CACTTGAGGGAAATTTGCTACTGT 59.480 41.667 9.70 0.82 0.00 3.55
37 38 4.762251 ACTTGAGGGAAATTTGCTACTGTC 59.238 41.667 9.70 0.77 0.00 3.51
38 39 3.686016 TGAGGGAAATTTGCTACTGTCC 58.314 45.455 9.70 0.00 0.00 4.02
39 40 3.073798 TGAGGGAAATTTGCTACTGTCCA 59.926 43.478 9.70 0.00 0.00 4.02
40 41 4.079253 GAGGGAAATTTGCTACTGTCCAA 58.921 43.478 9.70 0.00 0.00 3.53
41 42 3.826729 AGGGAAATTTGCTACTGTCCAAC 59.173 43.478 9.70 0.00 0.00 3.77
42 43 3.572255 GGGAAATTTGCTACTGTCCAACA 59.428 43.478 9.70 0.00 0.00 3.33
43 44 4.038642 GGGAAATTTGCTACTGTCCAACAA 59.961 41.667 9.70 0.00 0.00 2.83
44 45 5.452636 GGGAAATTTGCTACTGTCCAACAAA 60.453 40.000 9.70 0.00 34.97 2.83
45 46 5.462068 GGAAATTTGCTACTGTCCAACAAAC 59.538 40.000 1.93 0.00 33.46 2.93
46 47 4.584327 ATTTGCTACTGTCCAACAAACC 57.416 40.909 0.00 0.00 33.46 3.27
47 48 3.290948 TTGCTACTGTCCAACAAACCT 57.709 42.857 0.00 0.00 0.00 3.50
48 49 2.571212 TGCTACTGTCCAACAAACCTG 58.429 47.619 0.00 0.00 0.00 4.00
49 50 2.092646 TGCTACTGTCCAACAAACCTGT 60.093 45.455 0.00 0.00 37.39 4.00
50 51 2.290641 GCTACTGTCCAACAAACCTGTG 59.709 50.000 0.00 0.00 35.37 3.66
51 52 1.102978 ACTGTCCAACAAACCTGTGC 58.897 50.000 0.00 0.00 35.37 4.57
52 53 1.102154 CTGTCCAACAAACCTGTGCA 58.898 50.000 0.00 0.00 35.37 4.57
53 54 0.814457 TGTCCAACAAACCTGTGCAC 59.186 50.000 10.75 10.75 35.37 4.57
54 55 1.102978 GTCCAACAAACCTGTGCACT 58.897 50.000 19.41 0.00 35.37 4.40
55 56 1.476488 GTCCAACAAACCTGTGCACTT 59.524 47.619 19.41 0.48 35.37 3.16
56 57 1.476085 TCCAACAAACCTGTGCACTTG 59.524 47.619 19.41 15.92 35.37 3.16
57 58 1.280066 CAACAAACCTGTGCACTTGC 58.720 50.000 19.41 0.00 42.50 4.01
67 68 3.225798 GCACTTGCAGGCCCAACA 61.226 61.111 0.00 0.00 41.59 3.33
68 69 2.795110 GCACTTGCAGGCCCAACAA 61.795 57.895 0.00 0.00 41.59 2.83
69 70 2.051941 CACTTGCAGGCCCAACAAT 58.948 52.632 0.00 0.00 0.00 2.71
70 71 0.320073 CACTTGCAGGCCCAACAATG 60.320 55.000 0.00 0.00 0.00 2.82
71 72 0.760189 ACTTGCAGGCCCAACAATGT 60.760 50.000 0.00 0.00 0.00 2.71
72 73 0.037975 CTTGCAGGCCCAACAATGTC 60.038 55.000 0.00 0.00 0.00 3.06
73 74 0.469705 TTGCAGGCCCAACAATGTCT 60.470 50.000 0.00 0.00 0.00 3.41
74 75 0.403655 TGCAGGCCCAACAATGTCTA 59.596 50.000 0.00 0.00 0.00 2.59
75 76 0.811281 GCAGGCCCAACAATGTCTAC 59.189 55.000 0.00 0.00 0.00 2.59
76 77 1.886222 GCAGGCCCAACAATGTCTACA 60.886 52.381 0.00 0.00 0.00 2.74
77 78 2.513753 CAGGCCCAACAATGTCTACAA 58.486 47.619 0.00 0.00 0.00 2.41
78 79 2.489329 CAGGCCCAACAATGTCTACAAG 59.511 50.000 0.00 0.00 0.00 3.16
79 80 2.375174 AGGCCCAACAATGTCTACAAGA 59.625 45.455 0.00 0.00 0.00 3.02
80 81 3.153919 GGCCCAACAATGTCTACAAGAA 58.846 45.455 0.00 0.00 0.00 2.52
81 82 3.191371 GGCCCAACAATGTCTACAAGAAG 59.809 47.826 0.00 0.00 0.00 2.85
82 83 4.072131 GCCCAACAATGTCTACAAGAAGA 58.928 43.478 0.00 0.00 0.00 2.87
83 84 4.518970 GCCCAACAATGTCTACAAGAAGAA 59.481 41.667 0.00 0.00 0.00 2.52
84 85 5.335191 GCCCAACAATGTCTACAAGAAGAAG 60.335 44.000 0.00 0.00 0.00 2.85
85 86 5.182001 CCCAACAATGTCTACAAGAAGAAGG 59.818 44.000 0.00 0.00 0.00 3.46
86 87 5.765182 CCAACAATGTCTACAAGAAGAAGGT 59.235 40.000 0.00 0.00 0.00 3.50
87 88 6.263168 CCAACAATGTCTACAAGAAGAAGGTT 59.737 38.462 0.00 0.00 0.00 3.50
88 89 6.867662 ACAATGTCTACAAGAAGAAGGTTG 57.132 37.500 0.00 0.00 0.00 3.77
89 90 6.357367 ACAATGTCTACAAGAAGAAGGTTGT 58.643 36.000 0.00 0.00 40.08 3.32
90 91 6.260936 ACAATGTCTACAAGAAGAAGGTTGTG 59.739 38.462 0.00 0.00 37.46 3.33
91 92 5.353394 TGTCTACAAGAAGAAGGTTGTGT 57.647 39.130 0.00 0.00 37.46 3.72
92 93 6.474140 TGTCTACAAGAAGAAGGTTGTGTA 57.526 37.500 0.00 0.00 37.46 2.90
93 94 6.513180 TGTCTACAAGAAGAAGGTTGTGTAG 58.487 40.000 0.00 0.00 39.72 2.74
94 95 6.097839 TGTCTACAAGAAGAAGGTTGTGTAGT 59.902 38.462 8.12 0.00 39.49 2.73
95 96 7.286087 TGTCTACAAGAAGAAGGTTGTGTAGTA 59.714 37.037 8.12 0.00 39.49 1.82
96 97 7.808856 GTCTACAAGAAGAAGGTTGTGTAGTAG 59.191 40.741 8.12 0.00 39.49 2.57
97 98 6.726490 ACAAGAAGAAGGTTGTGTAGTAGA 57.274 37.500 0.00 0.00 35.55 2.59
98 99 6.514063 ACAAGAAGAAGGTTGTGTAGTAGAC 58.486 40.000 0.00 0.00 35.55 2.59
99 100 6.097839 ACAAGAAGAAGGTTGTGTAGTAGACA 59.902 38.462 0.00 0.00 35.55 3.41
100 101 6.919775 AGAAGAAGGTTGTGTAGTAGACAT 57.080 37.500 0.29 0.00 41.14 3.06
101 102 6.926313 AGAAGAAGGTTGTGTAGTAGACATC 58.074 40.000 0.29 0.61 41.14 3.06
109 110 6.691818 GGTTGTGTAGTAGACATCAATACTCG 59.308 42.308 0.29 0.00 41.14 4.18
112 113 7.862648 TGTGTAGTAGACATCAATACTCGATC 58.137 38.462 0.00 0.00 41.14 3.69
117 118 5.948992 AGACATCAATACTCGATCGATCA 57.051 39.130 24.40 9.78 0.00 2.92
118 119 5.694816 AGACATCAATACTCGATCGATCAC 58.305 41.667 24.40 0.00 0.00 3.06
119 120 4.799678 ACATCAATACTCGATCGATCACC 58.200 43.478 24.40 0.00 0.00 4.02
129 130 4.692129 CGATCACCTCGTTCTCCG 57.308 61.111 0.00 0.00 42.56 4.63
132 133 0.248702 GATCACCTCGTTCTCCGCTC 60.249 60.000 0.00 0.00 36.19 5.03
133 134 1.994507 ATCACCTCGTTCTCCGCTCG 61.995 60.000 0.00 0.00 36.19 5.03
134 135 4.117661 ACCTCGTTCTCCGCTCGC 62.118 66.667 0.00 0.00 36.19 5.03
135 136 4.116328 CCTCGTTCTCCGCTCGCA 62.116 66.667 0.00 0.00 36.19 5.10
166 167 2.125753 CTCCTTTGCTCGCTCGCT 60.126 61.111 0.00 0.00 0.00 4.93
167 168 2.433145 TCCTTTGCTCGCTCGCTG 60.433 61.111 0.00 0.00 0.00 5.18
169 170 1.812922 CCTTTGCTCGCTCGCTGAT 60.813 57.895 0.00 0.00 0.00 2.90
192 193 2.100605 TTTTTGCCGTGCTGGTTTTT 57.899 40.000 0.00 0.00 41.21 1.94
348 360 9.793259 AAAGTACATGGATCTGAAAAAGTTCTA 57.207 29.630 0.00 0.00 34.60 2.10
349 361 9.442047 AAGTACATGGATCTGAAAAAGTTCTAG 57.558 33.333 0.00 0.00 34.60 2.43
384 396 9.710900 AAAAAGTTCATGTCTTTGAAAGAAAGT 57.289 25.926 9.51 0.66 39.67 2.66
385 397 9.710900 AAAAGTTCATGTCTTTGAAAGAAAGTT 57.289 25.926 9.51 6.75 39.67 2.66
391 403 8.912988 TCATGTCTTTGAAAGAAAGTTAATGGT 58.087 29.630 9.51 0.00 39.67 3.55
548 562 3.889520 AAACTAGGCTAGGAACCTTCG 57.110 47.619 24.57 0.00 38.81 3.79
574 588 0.249868 CTGCACAAGAGTCCCACGAA 60.250 55.000 0.00 0.00 0.00 3.85
581 596 3.934391 GAGTCCCACGAACCTGGCG 62.934 68.421 0.00 0.00 0.00 5.69
589 604 4.465512 GAACCTGGCGTGCATGCG 62.466 66.667 23.96 13.26 35.06 4.73
602 621 1.524002 CATGCGGAGTGGATGGACT 59.476 57.895 0.00 0.00 42.27 3.85
612 631 0.613572 TGGATGGACTCACGGCTACA 60.614 55.000 0.00 0.00 0.00 2.74
622 641 2.480419 CTCACGGCTACAAACAAGAAGG 59.520 50.000 0.00 0.00 0.00 3.46
627 646 4.583073 ACGGCTACAAACAAGAAGGAAAAT 59.417 37.500 0.00 0.00 0.00 1.82
629 648 6.263617 ACGGCTACAAACAAGAAGGAAAATAA 59.736 34.615 0.00 0.00 0.00 1.40
632 651 9.788960 GGCTACAAACAAGAAGGAAAATAATAG 57.211 33.333 0.00 0.00 0.00 1.73
653 672 2.781403 AAATGGGCCAAGCATAGGAT 57.219 45.000 11.89 0.00 0.00 3.24
665 684 1.436600 CATAGGATGGAGATGCGTGC 58.563 55.000 0.00 0.00 0.00 5.34
666 685 1.051008 ATAGGATGGAGATGCGTGCA 58.949 50.000 0.00 0.00 0.00 4.57
668 687 2.528743 GGATGGAGATGCGTGCACG 61.529 63.158 34.01 34.01 43.27 5.34
678 697 2.660224 CGTGCACGCTGTGGTACA 60.660 61.111 28.16 0.00 33.64 2.90
689 708 2.947852 CTGTGGTACAGTGACAGTAGC 58.052 52.381 9.93 9.93 41.80 3.58
690 709 2.296190 CTGTGGTACAGTGACAGTAGCA 59.704 50.000 14.63 14.63 44.76 3.49
693 712 3.990092 TGGTACAGTGACAGTAGCAAAG 58.010 45.455 15.96 0.00 44.22 2.77
694 713 3.639561 TGGTACAGTGACAGTAGCAAAGA 59.360 43.478 15.96 0.00 44.22 2.52
695 714 4.238514 GGTACAGTGACAGTAGCAAAGAG 58.761 47.826 11.64 0.00 39.19 2.85
696 715 2.760374 ACAGTGACAGTAGCAAAGAGC 58.240 47.619 0.00 0.00 46.19 4.09
712 731 2.568696 GAGCGCATCTCTCTGTTACA 57.431 50.000 11.47 0.00 38.78 2.41
713 732 3.090952 GAGCGCATCTCTCTGTTACAT 57.909 47.619 11.47 0.00 38.78 2.29
714 733 3.049206 GAGCGCATCTCTCTGTTACATC 58.951 50.000 11.47 0.00 38.78 3.06
715 734 2.428530 AGCGCATCTCTCTGTTACATCA 59.571 45.455 11.47 0.00 0.00 3.07
716 735 2.793790 GCGCATCTCTCTGTTACATCAG 59.206 50.000 0.30 0.00 36.85 2.90
717 736 3.489908 GCGCATCTCTCTGTTACATCAGA 60.490 47.826 0.30 0.00 41.40 3.27
718 737 4.676546 CGCATCTCTCTGTTACATCAGAA 58.323 43.478 0.00 0.00 42.73 3.02
719 738 4.739228 CGCATCTCTCTGTTACATCAGAAG 59.261 45.833 0.00 0.00 42.73 2.85
720 739 5.659463 GCATCTCTCTGTTACATCAGAAGT 58.341 41.667 0.00 0.00 42.73 3.01
731 750 2.275318 CATCAGAAGTTTCCCTCTCGC 58.725 52.381 0.00 0.00 0.00 5.03
750 769 2.552373 CGCTAGGGTTTTGTTTCCTCCT 60.552 50.000 0.00 0.00 32.46 3.69
752 771 3.497942 GCTAGGGTTTTGTTTCCTCCTGA 60.498 47.826 0.00 0.00 32.46 3.86
776 795 2.177654 GATTTTTGTCGCCGCCGTCA 62.178 55.000 0.00 0.00 35.54 4.35
784 803 2.263540 GCCGCCGTCAAGAACCTA 59.736 61.111 0.00 0.00 0.00 3.08
785 804 1.375013 GCCGCCGTCAAGAACCTAA 60.375 57.895 0.00 0.00 0.00 2.69
787 806 1.287425 CCGCCGTCAAGAACCTAATC 58.713 55.000 0.00 0.00 0.00 1.75
795 816 4.161754 CGTCAAGAACCTAATCCCCTACTT 59.838 45.833 0.00 0.00 0.00 2.24
805 826 1.153349 CCCCTACTTCTTGCCTCGC 60.153 63.158 0.00 0.00 0.00 5.03
826 847 1.006805 CGCTGCTTCTATCCCTCGG 60.007 63.158 0.00 0.00 0.00 4.63
828 849 1.329256 GCTGCTTCTATCCCTCGGTA 58.671 55.000 0.00 0.00 0.00 4.02
829 850 1.271102 GCTGCTTCTATCCCTCGGTAG 59.729 57.143 0.00 0.00 0.00 3.18
839 860 1.364171 CCTCGGTAGGGAATCTGCG 59.636 63.158 0.00 0.00 39.48 5.18
851 872 0.461548 AATCTGCGCTCCGATCTTGA 59.538 50.000 9.73 0.00 0.00 3.02
857 878 0.958091 CGCTCCGATCTTGAGAGGAT 59.042 55.000 11.98 0.00 31.66 3.24
899 920 1.602237 GTTCATCCGAGAAGGCCCA 59.398 57.895 0.00 0.00 40.77 5.36
903 924 0.462759 CATCCGAGAAGGCCCAGTTC 60.463 60.000 0.00 0.00 40.77 3.01
911 933 0.407139 AAGGCCCAGTTCAGATTGCT 59.593 50.000 0.00 0.00 0.00 3.91
963 985 4.373116 GCTTCGGGGTCGTCTGCA 62.373 66.667 0.00 0.00 37.69 4.41
982 1004 1.211212 CATCAGGCCAACCAGAGATCA 59.789 52.381 5.01 0.00 34.53 2.92
1063 1085 4.202141 TGGTGTTTGATGAAAAGGAAGCAG 60.202 41.667 0.00 0.00 0.00 4.24
1065 1087 3.384146 TGTTTGATGAAAAGGAAGCAGCA 59.616 39.130 0.00 0.00 0.00 4.41
1075 1097 2.282040 AAGCAGCACTGGTGGCTC 60.282 61.111 10.19 0.00 40.23 4.70
1188 1212 3.562176 CCCAAGAGGTACAATTCAAGCCT 60.562 47.826 0.00 0.00 0.00 4.58
1209 1233 5.305644 GCCTTTGGAGGATAATCTCTACTCA 59.694 44.000 0.00 0.00 46.74 3.41
1223 1247 5.510430 TCTCTACTCAGTGCAATTCTCCTA 58.490 41.667 0.00 0.00 0.00 2.94
1250 1274 2.159085 GGGATTGGGAGAGAGTTACACG 60.159 54.545 0.00 0.00 0.00 4.49
1254 1278 3.367646 TGGGAGAGAGTTACACGAGAT 57.632 47.619 0.00 0.00 0.00 2.75
1303 1329 3.713248 AGTGATCCTCAAGCCATATGACA 59.287 43.478 3.65 0.00 0.00 3.58
1309 1335 3.072038 CCTCAAGCCATATGACAGGATGA 59.928 47.826 3.65 0.00 39.69 2.92
1323 1349 0.721718 GGATGACAAAGCCTTCGACG 59.278 55.000 0.00 0.00 0.00 5.12
1342 1368 6.032094 TCGACGGTTCAACTTGATAGTATTC 58.968 40.000 0.00 0.00 33.17 1.75
1344 1370 6.309494 CGACGGTTCAACTTGATAGTATTCAA 59.691 38.462 0.00 0.00 33.17 2.69
1393 1419 6.351371 GCCACCACTATATGCATATCTAGTGT 60.351 42.308 30.26 21.75 40.04 3.55
1403 1429 3.068307 GCATATCTAGTGTCGTCCCTTGT 59.932 47.826 0.00 0.00 0.00 3.16
1423 1449 2.928396 CGAAGGTGGGGGAGGTGT 60.928 66.667 0.00 0.00 0.00 4.16
1444 1470 0.965439 GTCCGCAGAGCCTATCTCAT 59.035 55.000 0.00 0.00 44.35 2.90
1445 1471 0.964700 TCCGCAGAGCCTATCTCATG 59.035 55.000 0.00 0.00 44.35 3.07
1554 1580 1.200519 AGCGCCAAATCTACAGGGTA 58.799 50.000 2.29 0.00 0.00 3.69
1689 1716 0.109319 CAACCTGGGCAATGCGTAAC 60.109 55.000 0.00 0.00 0.00 2.50
1742 1769 2.106938 CGGAAGCTGCGATGGCTA 59.893 61.111 0.15 0.00 39.30 3.93
1751 1780 3.142393 CGATGGCTAGACTGGGGG 58.858 66.667 0.00 0.00 0.00 5.40
1778 1807 0.914417 AGATTCTCAAGCCGGGGGAA 60.914 55.000 2.18 0.00 0.00 3.97
1786 1815 3.327404 GCCGGGGGAACAGAAGGA 61.327 66.667 2.18 0.00 0.00 3.36
1793 1822 1.271982 GGGGAACAGAAGGAAGGGAAC 60.272 57.143 0.00 0.00 0.00 3.62
1795 1824 2.505405 GGAACAGAAGGAAGGGAACAC 58.495 52.381 0.00 0.00 0.00 3.32
1801 1830 0.977395 AAGGAAGGGAACACGAGGAG 59.023 55.000 0.00 0.00 0.00 3.69
1817 1846 1.030488 GGAGACGGACATGGACTCGA 61.030 60.000 0.00 0.00 0.00 4.04
1823 1852 1.135139 CGGACATGGACTCGAAGATGT 59.865 52.381 0.00 0.00 33.89 3.06
1852 1881 1.616374 GAGGGGAATAGGAAGAGAGCG 59.384 57.143 0.00 0.00 0.00 5.03
1891 1920 1.976474 GGAAGCGCCAAACATGGGA 60.976 57.895 2.29 0.00 36.34 4.37
1927 1956 0.179004 AGGGAAACATGTTGGCGTCA 60.179 50.000 12.82 0.00 0.00 4.35
1960 1989 0.394899 CTCCTCCAAGCCCAATGTCC 60.395 60.000 0.00 0.00 0.00 4.02
1983 2012 1.447140 CAAAACCGGCGGATCTCGA 60.447 57.895 35.78 0.00 42.43 4.04
2128 2157 7.914427 TGATGATATGGGTAGTACAAGAGTT 57.086 36.000 2.06 0.00 0.00 3.01
2198 2227 5.172934 GGTATGATTGTTGTTCGTCCTACA 58.827 41.667 0.00 0.00 0.00 2.74
2209 2238 5.526115 TGTTCGTCCTACAGACTAAAACTG 58.474 41.667 0.00 0.00 43.91 3.16
2284 2313 4.388577 TGGGAGGAGATCTTCATATCGA 57.611 45.455 3.21 0.00 0.00 3.59
2319 2348 1.701031 TTCCACGCCAAGGAAGGTCA 61.701 55.000 0.00 0.00 40.11 4.02
2320 2349 1.002134 CCACGCCAAGGAAGGTCAT 60.002 57.895 0.00 0.00 0.00 3.06
2394 2423 0.252197 GCCAAAGGTCATAGTCCGGT 59.748 55.000 0.00 0.00 0.00 5.28
2399 2428 2.757894 AGGTCATAGTCCGGTCATCT 57.242 50.000 0.00 0.00 0.00 2.90
2430 2459 2.350863 AATCCAGGACTCCCTCAGTT 57.649 50.000 0.00 0.00 42.02 3.16
2446 2475 4.278513 TTGCCCCCGAACCAGGTG 62.279 66.667 0.00 0.00 0.00 4.00
2448 2477 3.324108 GCCCCCGAACCAGGTGTA 61.324 66.667 0.00 0.00 0.00 2.90
2450 2479 1.996086 CCCCCGAACCAGGTGTAAT 59.004 57.895 0.00 0.00 0.00 1.89
2451 2480 0.393808 CCCCCGAACCAGGTGTAATG 60.394 60.000 0.00 0.00 0.00 1.90
2452 2481 1.029947 CCCCGAACCAGGTGTAATGC 61.030 60.000 0.00 0.00 0.00 3.56
2453 2482 1.029947 CCCGAACCAGGTGTAATGCC 61.030 60.000 0.00 0.00 0.00 4.40
2455 2484 1.029947 CGAACCAGGTGTAATGCCCC 61.030 60.000 0.00 0.00 0.00 5.80
2456 2485 1.001393 AACCAGGTGTAATGCCCCG 60.001 57.895 0.00 0.00 0.00 5.73
2458 2487 2.675242 CCAGGTGTAATGCCCCGGA 61.675 63.158 0.73 0.00 0.00 5.14
2478 2509 3.190849 CGATGCGCCAGGTGTCTG 61.191 66.667 4.18 0.00 40.59 3.51
2479 2510 3.503363 GATGCGCCAGGTGTCTGC 61.503 66.667 4.18 0.00 39.61 4.26
2483 2514 4.320456 CGCCAGGTGTCTGCCAGT 62.320 66.667 0.00 0.00 39.61 4.00
2484 2515 2.113986 GCCAGGTGTCTGCCAGTT 59.886 61.111 0.00 0.00 39.61 3.16
2485 2516 1.374947 GCCAGGTGTCTGCCAGTTA 59.625 57.895 0.00 0.00 39.61 2.24
2486 2517 0.035056 GCCAGGTGTCTGCCAGTTAT 60.035 55.000 0.00 0.00 39.61 1.89
2487 2518 1.614317 GCCAGGTGTCTGCCAGTTATT 60.614 52.381 0.00 0.00 39.61 1.40
2488 2519 2.359900 CCAGGTGTCTGCCAGTTATTC 58.640 52.381 0.00 0.00 39.61 1.75
2489 2520 2.002586 CAGGTGTCTGCCAGTTATTCG 58.997 52.381 0.00 0.00 33.86 3.34
2490 2521 0.727398 GGTGTCTGCCAGTTATTCGC 59.273 55.000 0.00 0.00 0.00 4.70
2491 2522 1.676014 GGTGTCTGCCAGTTATTCGCT 60.676 52.381 0.00 0.00 0.00 4.93
2492 2523 1.394917 GTGTCTGCCAGTTATTCGCTG 59.605 52.381 0.00 0.00 0.00 5.18
2493 2524 1.001974 TGTCTGCCAGTTATTCGCTGT 59.998 47.619 0.00 0.00 32.41 4.40
2494 2525 1.661112 GTCTGCCAGTTATTCGCTGTC 59.339 52.381 0.00 0.00 32.41 3.51
2495 2526 0.647410 CTGCCAGTTATTCGCTGTCG 59.353 55.000 0.00 0.00 32.41 4.35
2496 2527 0.037697 TGCCAGTTATTCGCTGTCGT 60.038 50.000 0.00 0.00 36.96 4.34
2497 2528 1.076332 GCCAGTTATTCGCTGTCGTT 58.924 50.000 0.00 0.00 36.96 3.85
2498 2529 1.201921 GCCAGTTATTCGCTGTCGTTG 60.202 52.381 0.00 0.00 36.96 4.10
2499 2530 1.201921 CCAGTTATTCGCTGTCGTTGC 60.202 52.381 0.00 0.00 36.96 4.17
2500 2531 1.076332 AGTTATTCGCTGTCGTTGCC 58.924 50.000 0.00 0.00 36.96 4.52
2501 2532 0.793861 GTTATTCGCTGTCGTTGCCA 59.206 50.000 0.00 0.00 36.96 4.92
2502 2533 1.396996 GTTATTCGCTGTCGTTGCCAT 59.603 47.619 0.00 0.00 36.96 4.40
2503 2534 1.006086 TATTCGCTGTCGTTGCCATG 58.994 50.000 0.00 0.00 36.96 3.66
2504 2535 0.955428 ATTCGCTGTCGTTGCCATGT 60.955 50.000 0.00 0.00 36.96 3.21
2505 2536 1.565156 TTCGCTGTCGTTGCCATGTC 61.565 55.000 0.00 0.00 36.96 3.06
2506 2537 2.316867 CGCTGTCGTTGCCATGTCA 61.317 57.895 0.00 0.00 0.00 3.58
2507 2538 1.638388 CGCTGTCGTTGCCATGTCAT 61.638 55.000 0.00 0.00 0.00 3.06
2508 2539 0.523072 GCTGTCGTTGCCATGTCATT 59.477 50.000 0.00 0.00 0.00 2.57
2509 2540 1.068333 GCTGTCGTTGCCATGTCATTT 60.068 47.619 0.00 0.00 0.00 2.32
2510 2541 2.587956 CTGTCGTTGCCATGTCATTTG 58.412 47.619 0.00 0.00 0.00 2.32
2511 2542 1.335780 TGTCGTTGCCATGTCATTTGC 60.336 47.619 0.00 0.00 0.00 3.68
2512 2543 1.068333 GTCGTTGCCATGTCATTTGCT 60.068 47.619 5.85 0.00 0.00 3.91
2513 2544 1.612950 TCGTTGCCATGTCATTTGCTT 59.387 42.857 5.85 0.00 0.00 3.91
2514 2545 1.722464 CGTTGCCATGTCATTTGCTTG 59.278 47.619 5.85 0.00 0.00 4.01
2515 2546 1.461897 GTTGCCATGTCATTTGCTTGC 59.538 47.619 5.85 0.00 0.00 4.01
2516 2547 0.388778 TGCCATGTCATTTGCTTGCG 60.389 50.000 5.85 0.00 0.00 4.85
2517 2548 0.388907 GCCATGTCATTTGCTTGCGT 60.389 50.000 0.00 0.00 0.00 5.24
2518 2549 1.342555 CCATGTCATTTGCTTGCGTG 58.657 50.000 0.00 0.00 0.00 5.34
2519 2550 1.336148 CCATGTCATTTGCTTGCGTGT 60.336 47.619 0.00 0.00 0.00 4.49
2520 2551 2.396601 CATGTCATTTGCTTGCGTGTT 58.603 42.857 0.00 0.00 0.00 3.32
2521 2552 1.837648 TGTCATTTGCTTGCGTGTTG 58.162 45.000 0.00 0.00 0.00 3.33
2522 2553 0.503961 GTCATTTGCTTGCGTGTTGC 59.496 50.000 0.00 0.00 46.70 4.17
2535 2566 4.743507 GCGTGTTGCATTTTATCATGTC 57.256 40.909 0.00 0.00 45.45 3.06
2536 2567 4.165036 GCGTGTTGCATTTTATCATGTCA 58.835 39.130 0.00 0.00 45.45 3.58
2537 2568 4.799949 GCGTGTTGCATTTTATCATGTCAT 59.200 37.500 0.00 0.00 45.45 3.06
2538 2569 5.052172 GCGTGTTGCATTTTATCATGTCATC 60.052 40.000 0.00 0.00 45.45 2.92
2539 2570 6.028987 CGTGTTGCATTTTATCATGTCATCA 58.971 36.000 0.00 0.00 0.00 3.07
2540 2571 6.693978 CGTGTTGCATTTTATCATGTCATCAT 59.306 34.615 0.00 0.00 34.21 2.45
2549 2580 1.128513 CATGTCATCATGCGCATTGC 58.871 50.000 22.81 13.70 43.66 3.56
2559 2590 1.841372 GCGCATTGCATTGCATACG 59.159 52.632 27.63 16.42 45.45 3.06
2560 2591 0.866906 GCGCATTGCATTGCATACGT 60.867 50.000 27.63 0.00 45.45 3.57
2561 2592 0.841356 CGCATTGCATTGCATACGTG 59.159 50.000 27.63 10.20 42.91 4.49
2562 2593 1.794800 CGCATTGCATTGCATACGTGT 60.795 47.619 27.63 0.00 42.91 4.49
2563 2594 2.261345 GCATTGCATTGCATACGTGTT 58.739 42.857 24.71 0.00 42.31 3.32
2564 2595 2.279659 GCATTGCATTGCATACGTGTTC 59.720 45.455 24.71 0.00 42.31 3.18
2565 2596 2.239751 TTGCATTGCATACGTGTTCG 57.760 45.000 12.95 0.00 38.76 3.95
2566 2597 1.152510 TGCATTGCATACGTGTTCGT 58.847 45.000 7.38 0.00 42.94 3.85
2567 2598 1.127766 TGCATTGCATACGTGTTCGTC 59.872 47.619 7.38 0.00 40.89 4.20
2568 2599 3.184786 TGCATTGCATACGTGTTCGTCT 61.185 45.455 7.38 0.00 40.89 4.18
2569 2600 5.000031 TGCATTGCATACGTGTTCGTCTC 62.000 47.826 7.38 0.00 40.89 3.36
2577 2608 0.647410 CGTGTTCGTCTCATGCATCC 59.353 55.000 0.00 0.00 0.00 3.51
2578 2609 0.647410 GTGTTCGTCTCATGCATCCG 59.353 55.000 0.00 0.00 0.00 4.18
2579 2610 0.530288 TGTTCGTCTCATGCATCCGA 59.470 50.000 0.00 0.00 0.00 4.55
2580 2611 1.203928 GTTCGTCTCATGCATCCGAG 58.796 55.000 7.55 7.55 0.00 4.63
2581 2612 0.528466 TTCGTCTCATGCATCCGAGC 60.528 55.000 8.78 4.49 0.00 5.03
2582 2613 1.953138 CGTCTCATGCATCCGAGCC 60.953 63.158 8.78 0.00 0.00 4.70
2583 2614 1.445095 GTCTCATGCATCCGAGCCT 59.555 57.895 8.78 0.00 0.00 4.58
2584 2615 0.179062 GTCTCATGCATCCGAGCCTT 60.179 55.000 8.78 0.00 0.00 4.35
2585 2616 0.543277 TCTCATGCATCCGAGCCTTT 59.457 50.000 8.78 0.00 0.00 3.11
2586 2617 1.065199 TCTCATGCATCCGAGCCTTTT 60.065 47.619 8.78 0.00 0.00 2.27
2587 2618 1.332997 CTCATGCATCCGAGCCTTTTC 59.667 52.381 0.00 0.00 0.00 2.29
2588 2619 0.383231 CATGCATCCGAGCCTTTTCC 59.617 55.000 0.00 0.00 0.00 3.13
2589 2620 0.753111 ATGCATCCGAGCCTTTTCCC 60.753 55.000 0.00 0.00 0.00 3.97
2590 2621 2.121538 GCATCCGAGCCTTTTCCCC 61.122 63.158 0.00 0.00 0.00 4.81
2591 2622 1.819632 CATCCGAGCCTTTTCCCCG 60.820 63.158 0.00 0.00 0.00 5.73
2592 2623 2.298661 ATCCGAGCCTTTTCCCCGT 61.299 57.895 0.00 0.00 0.00 5.28
2593 2624 1.848886 ATCCGAGCCTTTTCCCCGTT 61.849 55.000 0.00 0.00 0.00 4.44
2594 2625 2.332654 CCGAGCCTTTTCCCCGTTG 61.333 63.158 0.00 0.00 0.00 4.10
2595 2626 1.599797 CGAGCCTTTTCCCCGTTGT 60.600 57.895 0.00 0.00 0.00 3.32
2596 2627 1.574702 CGAGCCTTTTCCCCGTTGTC 61.575 60.000 0.00 0.00 0.00 3.18
2597 2628 1.228459 AGCCTTTTCCCCGTTGTCC 60.228 57.895 0.00 0.00 0.00 4.02
2598 2629 2.622962 GCCTTTTCCCCGTTGTCCG 61.623 63.158 0.00 0.00 0.00 4.79
2599 2630 1.228033 CCTTTTCCCCGTTGTCCGT 60.228 57.895 0.00 0.00 33.66 4.69
2600 2631 0.820482 CCTTTTCCCCGTTGTCCGTT 60.820 55.000 0.00 0.00 33.66 4.44
2601 2632 1.026584 CTTTTCCCCGTTGTCCGTTT 58.973 50.000 0.00 0.00 33.66 3.60
2602 2633 1.406180 CTTTTCCCCGTTGTCCGTTTT 59.594 47.619 0.00 0.00 33.66 2.43
2603 2634 0.739561 TTTCCCCGTTGTCCGTTTTG 59.260 50.000 0.00 0.00 33.66 2.44
2604 2635 1.726533 TTCCCCGTTGTCCGTTTTGC 61.727 55.000 0.00 0.00 33.66 3.68
2605 2636 2.482333 CCCCGTTGTCCGTTTTGCA 61.482 57.895 0.00 0.00 33.66 4.08
2606 2637 1.433879 CCCGTTGTCCGTTTTGCAA 59.566 52.632 0.00 0.00 33.66 4.08
2607 2638 0.031449 CCCGTTGTCCGTTTTGCAAT 59.969 50.000 0.00 0.00 33.66 3.56
2608 2639 1.404477 CCGTTGTCCGTTTTGCAATC 58.596 50.000 0.00 0.00 33.66 2.67
2609 2640 1.404477 CGTTGTCCGTTTTGCAATCC 58.596 50.000 0.00 0.00 0.00 3.01
2610 2641 1.404477 GTTGTCCGTTTTGCAATCCG 58.596 50.000 0.00 5.58 0.00 4.18
2611 2642 0.312416 TTGTCCGTTTTGCAATCCGG 59.688 50.000 23.97 23.97 41.75 5.14
2612 2643 1.443702 GTCCGTTTTGCAATCCGGC 60.444 57.895 24.72 18.11 40.23 6.13
2613 2644 1.899054 TCCGTTTTGCAATCCGGCA 60.899 52.632 24.72 14.85 43.19 5.69
2614 2645 1.215117 CCGTTTTGCAATCCGGCAT 59.785 52.632 20.15 0.00 44.48 4.40
2615 2646 0.389687 CCGTTTTGCAATCCGGCATT 60.390 50.000 20.15 0.00 44.48 3.56
2616 2647 0.991344 CGTTTTGCAATCCGGCATTC 59.009 50.000 0.00 0.00 44.48 2.67
2617 2648 1.358877 GTTTTGCAATCCGGCATTCC 58.641 50.000 0.00 0.00 44.48 3.01
2618 2649 1.066929 GTTTTGCAATCCGGCATTCCT 60.067 47.619 0.00 0.00 44.48 3.36
2619 2650 2.136298 TTTGCAATCCGGCATTCCTA 57.864 45.000 0.00 0.00 44.48 2.94
2620 2651 2.363306 TTGCAATCCGGCATTCCTAT 57.637 45.000 0.00 0.00 44.48 2.57
2621 2652 1.608055 TGCAATCCGGCATTCCTATG 58.392 50.000 0.00 0.00 39.25 2.23
2622 2653 1.133823 TGCAATCCGGCATTCCTATGT 60.134 47.619 0.00 0.00 39.25 2.29
2623 2654 1.537202 GCAATCCGGCATTCCTATGTC 59.463 52.381 0.00 0.00 34.12 3.06
2624 2655 2.849942 CAATCCGGCATTCCTATGTCA 58.150 47.619 0.00 0.00 36.11 3.58
2625 2656 3.415212 CAATCCGGCATTCCTATGTCAT 58.585 45.455 0.00 0.00 36.11 3.06
2626 2657 2.839486 TCCGGCATTCCTATGTCATC 57.161 50.000 0.00 0.00 36.11 2.92
2627 2658 1.347707 TCCGGCATTCCTATGTCATCC 59.652 52.381 0.00 0.00 36.11 3.51
2628 2659 1.432514 CGGCATTCCTATGTCATCCG 58.567 55.000 0.00 0.00 36.11 4.18
2629 2660 1.813513 GGCATTCCTATGTCATCCGG 58.186 55.000 0.00 0.00 36.37 5.14
2630 2661 1.160137 GCATTCCTATGTCATCCGGC 58.840 55.000 0.00 0.00 34.12 6.13
2631 2662 1.432514 CATTCCTATGTCATCCGGCG 58.567 55.000 0.00 0.00 0.00 6.46
2632 2663 1.048601 ATTCCTATGTCATCCGGCGT 58.951 50.000 6.01 0.00 0.00 5.68
2633 2664 0.387929 TTCCTATGTCATCCGGCGTC 59.612 55.000 6.01 0.00 0.00 5.19
2634 2665 1.006102 CCTATGTCATCCGGCGTCC 60.006 63.158 6.01 0.00 0.00 4.79
2635 2666 1.006102 CTATGTCATCCGGCGTCCC 60.006 63.158 6.01 0.00 0.00 4.46
2636 2667 2.436087 CTATGTCATCCGGCGTCCCC 62.436 65.000 6.01 0.00 0.00 4.81
2637 2668 2.939760 TATGTCATCCGGCGTCCCCT 62.940 60.000 6.01 0.00 0.00 4.79
2638 2669 3.782443 GTCATCCGGCGTCCCCTT 61.782 66.667 6.01 0.00 0.00 3.95
2639 2670 3.467226 TCATCCGGCGTCCCCTTC 61.467 66.667 6.01 0.00 0.00 3.46
2640 2671 3.470888 CATCCGGCGTCCCCTTCT 61.471 66.667 6.01 0.00 0.00 2.85
2641 2672 2.687566 ATCCGGCGTCCCCTTCTT 60.688 61.111 6.01 0.00 0.00 2.52
2642 2673 3.031417 ATCCGGCGTCCCCTTCTTG 62.031 63.158 6.01 0.00 0.00 3.02
2645 2676 4.035102 GGCGTCCCCTTCTTGCCT 62.035 66.667 0.00 0.00 42.44 4.75
2646 2677 2.436824 GCGTCCCCTTCTTGCCTC 60.437 66.667 0.00 0.00 0.00 4.70
2647 2678 2.960688 GCGTCCCCTTCTTGCCTCT 61.961 63.158 0.00 0.00 0.00 3.69
2648 2679 1.219393 CGTCCCCTTCTTGCCTCTC 59.781 63.158 0.00 0.00 0.00 3.20
2649 2680 1.261238 CGTCCCCTTCTTGCCTCTCT 61.261 60.000 0.00 0.00 0.00 3.10
2650 2681 0.988063 GTCCCCTTCTTGCCTCTCTT 59.012 55.000 0.00 0.00 0.00 2.85
2651 2682 1.065782 GTCCCCTTCTTGCCTCTCTTC 60.066 57.143 0.00 0.00 0.00 2.87
2652 2683 0.107945 CCCCTTCTTGCCTCTCTTCG 60.108 60.000 0.00 0.00 0.00 3.79
2653 2684 0.610687 CCCTTCTTGCCTCTCTTCGT 59.389 55.000 0.00 0.00 0.00 3.85
2654 2685 1.674221 CCCTTCTTGCCTCTCTTCGTG 60.674 57.143 0.00 0.00 0.00 4.35
2655 2686 1.001406 CCTTCTTGCCTCTCTTCGTGT 59.999 52.381 0.00 0.00 0.00 4.49
2656 2687 2.064762 CTTCTTGCCTCTCTTCGTGTG 58.935 52.381 0.00 0.00 0.00 3.82
2657 2688 0.319900 TCTTGCCTCTCTTCGTGTGC 60.320 55.000 0.00 0.00 0.00 4.57
2658 2689 1.621301 CTTGCCTCTCTTCGTGTGCG 61.621 60.000 0.00 0.00 39.92 5.34
2659 2690 2.811317 GCCTCTCTTCGTGTGCGG 60.811 66.667 0.00 0.00 38.89 5.69
2660 2691 2.125912 CCTCTCTTCGTGTGCGGG 60.126 66.667 0.00 0.00 38.89 6.13
2661 2692 2.651361 CTCTCTTCGTGTGCGGGT 59.349 61.111 0.00 0.00 38.89 5.28
2662 2693 1.592400 CCTCTCTTCGTGTGCGGGTA 61.592 60.000 0.00 0.00 38.89 3.69
2663 2694 0.456221 CTCTCTTCGTGTGCGGGTAT 59.544 55.000 0.00 0.00 38.89 2.73
2664 2695 0.892755 TCTCTTCGTGTGCGGGTATT 59.107 50.000 0.00 0.00 38.89 1.89
2665 2696 2.093890 TCTCTTCGTGTGCGGGTATTA 58.906 47.619 0.00 0.00 38.89 0.98
2666 2697 2.492881 TCTCTTCGTGTGCGGGTATTAA 59.507 45.455 0.00 0.00 38.89 1.40
2667 2698 3.056678 TCTCTTCGTGTGCGGGTATTAAA 60.057 43.478 0.00 0.00 38.89 1.52
2668 2699 2.995258 TCTTCGTGTGCGGGTATTAAAC 59.005 45.455 0.00 0.00 38.89 2.01
2669 2700 2.747396 TCGTGTGCGGGTATTAAACT 57.253 45.000 0.00 0.00 38.89 2.66
2670 2701 3.042871 TCGTGTGCGGGTATTAAACTT 57.957 42.857 0.00 0.00 38.89 2.66
2671 2702 3.401182 TCGTGTGCGGGTATTAAACTTT 58.599 40.909 0.00 0.00 38.89 2.66
2672 2703 3.432933 TCGTGTGCGGGTATTAAACTTTC 59.567 43.478 0.00 0.00 38.89 2.62
2673 2704 3.434299 CGTGTGCGGGTATTAAACTTTCT 59.566 43.478 0.00 0.00 0.00 2.52
2674 2705 4.435121 CGTGTGCGGGTATTAAACTTTCTC 60.435 45.833 0.00 0.00 0.00 2.87
2675 2706 3.680937 TGTGCGGGTATTAAACTTTCTCG 59.319 43.478 0.00 0.00 0.00 4.04
2676 2707 3.063045 GTGCGGGTATTAAACTTTCTCGG 59.937 47.826 0.00 0.00 0.00 4.63
2677 2708 3.055963 TGCGGGTATTAAACTTTCTCGGA 60.056 43.478 0.00 0.00 0.00 4.55
2678 2709 3.934579 GCGGGTATTAAACTTTCTCGGAA 59.065 43.478 0.00 0.00 0.00 4.30
2679 2710 4.573607 GCGGGTATTAAACTTTCTCGGAAT 59.426 41.667 0.00 0.00 0.00 3.01
2680 2711 5.503520 GCGGGTATTAAACTTTCTCGGAATG 60.504 44.000 0.00 0.00 0.00 2.67
2681 2712 5.007332 CGGGTATTAAACTTTCTCGGAATGG 59.993 44.000 0.00 0.00 0.00 3.16
2682 2713 5.220989 GGGTATTAAACTTTCTCGGAATGGC 60.221 44.000 0.00 0.00 0.00 4.40
2683 2714 4.983671 ATTAAACTTTCTCGGAATGGCC 57.016 40.909 0.00 0.00 0.00 5.36
2684 2715 1.545841 AAACTTTCTCGGAATGGCCC 58.454 50.000 0.00 0.00 0.00 5.80
2692 2723 4.434483 GGAATGGCCCGAGGTTTT 57.566 55.556 0.00 0.00 0.00 2.43
2693 2724 2.189833 GGAATGGCCCGAGGTTTTC 58.810 57.895 0.00 0.00 0.00 2.29
2694 2725 1.320344 GGAATGGCCCGAGGTTTTCC 61.320 60.000 0.00 0.00 41.05 3.13
2695 2726 0.610785 GAATGGCCCGAGGTTTTCCA 60.611 55.000 0.00 0.00 43.73 3.53
2696 2727 0.178947 AATGGCCCGAGGTTTTCCAA 60.179 50.000 0.00 0.00 43.73 3.53
2697 2728 0.611896 ATGGCCCGAGGTTTTCCAAG 60.612 55.000 0.00 0.00 43.73 3.61
2698 2729 2.636412 GGCCCGAGGTTTTCCAAGC 61.636 63.158 0.00 0.00 43.73 4.01
2699 2730 2.978018 GCCCGAGGTTTTCCAAGCG 61.978 63.158 0.00 0.00 43.73 4.68
2700 2731 2.332654 CCCGAGGTTTTCCAAGCGG 61.333 63.158 0.00 0.00 44.76 5.52
2701 2732 2.561373 CGAGGTTTTCCAAGCGGC 59.439 61.111 0.00 0.00 43.73 6.53
2702 2733 2.962569 GAGGTTTTCCAAGCGGCC 59.037 61.111 0.00 0.00 43.73 6.13
2703 2734 1.603739 GAGGTTTTCCAAGCGGCCT 60.604 57.895 0.00 0.00 43.73 5.19
2704 2735 1.152546 AGGTTTTCCAAGCGGCCTT 60.153 52.632 0.00 0.00 43.73 4.35
2705 2736 1.006220 GGTTTTCCAAGCGGCCTTG 60.006 57.895 0.00 0.00 46.38 3.61
2713 2744 1.745232 CAAGCGGCCTTGGTATAACA 58.255 50.000 0.00 0.00 43.75 2.41
2714 2745 1.400494 CAAGCGGCCTTGGTATAACAC 59.600 52.381 0.00 0.00 43.75 3.32
2739 2770 1.849097 GACCGTCTGTCAAGTTTCGT 58.151 50.000 0.00 0.00 43.85 3.85
2740 2771 1.521423 GACCGTCTGTCAAGTTTCGTG 59.479 52.381 0.00 0.00 43.85 4.35
2741 2772 0.232303 CCGTCTGTCAAGTTTCGTGC 59.768 55.000 0.00 0.00 0.00 5.34
2742 2773 0.232303 CGTCTGTCAAGTTTCGTGCC 59.768 55.000 0.00 0.00 0.00 5.01
2743 2774 1.295792 GTCTGTCAAGTTTCGTGCCA 58.704 50.000 0.00 0.00 0.00 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.107601 TCCCTCAAGTGGATGACCTAAG 58.892 50.000 0.00 0.00 37.04 2.18
6 7 2.879103 TTTCCCTCAAGTGGATGACC 57.121 50.000 0.00 0.00 0.00 4.02
8 9 3.511146 GCAAATTTCCCTCAAGTGGATGA 59.489 43.478 0.00 0.00 0.00 2.92
10 11 3.782992 AGCAAATTTCCCTCAAGTGGAT 58.217 40.909 0.00 0.00 0.00 3.41
11 12 3.243359 AGCAAATTTCCCTCAAGTGGA 57.757 42.857 0.00 0.00 0.00 4.02
12 13 4.082125 AGTAGCAAATTTCCCTCAAGTGG 58.918 43.478 0.00 0.00 0.00 4.00
13 14 4.520492 ACAGTAGCAAATTTCCCTCAAGTG 59.480 41.667 0.00 0.00 0.00 3.16
14 15 4.729868 ACAGTAGCAAATTTCCCTCAAGT 58.270 39.130 0.00 0.00 0.00 3.16
15 16 4.156739 GGACAGTAGCAAATTTCCCTCAAG 59.843 45.833 0.00 0.00 0.00 3.02
16 17 4.079253 GGACAGTAGCAAATTTCCCTCAA 58.921 43.478 0.00 0.00 0.00 3.02
17 18 3.073798 TGGACAGTAGCAAATTTCCCTCA 59.926 43.478 0.00 0.00 0.00 3.86
18 19 3.686016 TGGACAGTAGCAAATTTCCCTC 58.314 45.455 0.00 0.00 0.00 4.30
19 20 3.806949 TGGACAGTAGCAAATTTCCCT 57.193 42.857 0.00 0.00 0.00 4.20
20 21 3.572255 TGTTGGACAGTAGCAAATTTCCC 59.428 43.478 0.00 0.00 0.00 3.97
21 22 4.846779 TGTTGGACAGTAGCAAATTTCC 57.153 40.909 0.00 0.00 0.00 3.13
22 23 5.462068 GGTTTGTTGGACAGTAGCAAATTTC 59.538 40.000 0.00 0.00 32.71 2.17
23 24 5.128663 AGGTTTGTTGGACAGTAGCAAATTT 59.871 36.000 0.00 0.00 32.71 1.82
24 25 4.649218 AGGTTTGTTGGACAGTAGCAAATT 59.351 37.500 0.00 0.00 32.71 1.82
25 26 4.037923 CAGGTTTGTTGGACAGTAGCAAAT 59.962 41.667 0.00 0.00 32.71 2.32
26 27 3.380004 CAGGTTTGTTGGACAGTAGCAAA 59.620 43.478 0.00 0.00 0.00 3.68
27 28 2.948979 CAGGTTTGTTGGACAGTAGCAA 59.051 45.455 0.00 0.00 0.00 3.91
28 29 2.092646 ACAGGTTTGTTGGACAGTAGCA 60.093 45.455 0.00 0.00 32.28 3.49
29 30 2.290641 CACAGGTTTGTTGGACAGTAGC 59.709 50.000 0.00 0.00 34.62 3.58
30 31 2.290641 GCACAGGTTTGTTGGACAGTAG 59.709 50.000 0.00 0.00 34.62 2.57
31 32 2.294074 GCACAGGTTTGTTGGACAGTA 58.706 47.619 0.00 0.00 34.62 2.74
32 33 1.102978 GCACAGGTTTGTTGGACAGT 58.897 50.000 0.00 0.00 34.62 3.55
33 34 1.102154 TGCACAGGTTTGTTGGACAG 58.898 50.000 0.00 0.00 34.62 3.51
34 35 0.814457 GTGCACAGGTTTGTTGGACA 59.186 50.000 13.17 0.00 34.62 4.02
35 36 1.102978 AGTGCACAGGTTTGTTGGAC 58.897 50.000 21.04 0.00 34.62 4.02
36 37 1.476085 CAAGTGCACAGGTTTGTTGGA 59.524 47.619 21.04 0.00 34.62 3.53
37 38 1.925229 CAAGTGCACAGGTTTGTTGG 58.075 50.000 21.04 0.00 34.62 3.77
38 39 1.280066 GCAAGTGCACAGGTTTGTTG 58.720 50.000 21.04 13.52 41.59 3.33
39 40 3.739077 GCAAGTGCACAGGTTTGTT 57.261 47.368 21.04 0.00 41.59 2.83
50 51 2.103339 ATTGTTGGGCCTGCAAGTGC 62.103 55.000 4.53 0.00 42.50 4.40
51 52 0.320073 CATTGTTGGGCCTGCAAGTG 60.320 55.000 4.53 6.83 0.00 3.16
52 53 0.760189 ACATTGTTGGGCCTGCAAGT 60.760 50.000 4.53 7.35 0.00 3.16
53 54 0.037975 GACATTGTTGGGCCTGCAAG 60.038 55.000 4.53 6.78 0.00 4.01
54 55 0.469705 AGACATTGTTGGGCCTGCAA 60.470 50.000 4.53 10.44 0.00 4.08
55 56 0.403655 TAGACATTGTTGGGCCTGCA 59.596 50.000 4.53 0.00 0.00 4.41
56 57 0.811281 GTAGACATTGTTGGGCCTGC 59.189 55.000 4.53 0.00 0.00 4.85
57 58 2.198827 TGTAGACATTGTTGGGCCTG 57.801 50.000 4.53 0.00 0.00 4.85
58 59 2.375174 TCTTGTAGACATTGTTGGGCCT 59.625 45.455 4.53 0.00 0.00 5.19
59 60 2.790433 TCTTGTAGACATTGTTGGGCC 58.210 47.619 0.00 0.00 0.00 5.80
60 61 4.072131 TCTTCTTGTAGACATTGTTGGGC 58.928 43.478 0.00 0.00 0.00 5.36
61 62 5.182001 CCTTCTTCTTGTAGACATTGTTGGG 59.818 44.000 0.00 0.00 0.00 4.12
62 63 5.765182 ACCTTCTTCTTGTAGACATTGTTGG 59.235 40.000 0.00 0.00 0.00 3.77
63 64 6.867662 ACCTTCTTCTTGTAGACATTGTTG 57.132 37.500 0.00 0.00 0.00 3.33
64 65 6.828785 ACAACCTTCTTCTTGTAGACATTGTT 59.171 34.615 0.00 0.00 0.00 2.83
65 66 6.260936 CACAACCTTCTTCTTGTAGACATTGT 59.739 38.462 0.00 0.00 30.08 2.71
66 67 6.260936 ACACAACCTTCTTCTTGTAGACATTG 59.739 38.462 0.00 0.00 0.00 2.82
67 68 6.357367 ACACAACCTTCTTCTTGTAGACATT 58.643 36.000 0.00 0.00 0.00 2.71
68 69 5.930135 ACACAACCTTCTTCTTGTAGACAT 58.070 37.500 0.00 0.00 0.00 3.06
69 70 5.353394 ACACAACCTTCTTCTTGTAGACA 57.647 39.130 0.00 0.00 0.00 3.41
70 71 6.514063 ACTACACAACCTTCTTCTTGTAGAC 58.486 40.000 12.31 0.00 39.06 2.59
71 72 6.726490 ACTACACAACCTTCTTCTTGTAGA 57.274 37.500 12.31 0.00 39.06 2.59
72 73 7.808856 GTCTACTACACAACCTTCTTCTTGTAG 59.191 40.741 5.27 5.27 41.37 2.74
73 74 7.286087 TGTCTACTACACAACCTTCTTCTTGTA 59.714 37.037 0.00 0.00 31.43 2.41
74 75 6.097839 TGTCTACTACACAACCTTCTTCTTGT 59.902 38.462 0.00 0.00 31.43 3.16
75 76 6.513180 TGTCTACTACACAACCTTCTTCTTG 58.487 40.000 0.00 0.00 31.43 3.02
76 77 6.726490 TGTCTACTACACAACCTTCTTCTT 57.274 37.500 0.00 0.00 31.43 2.52
77 78 6.493802 TGATGTCTACTACACAACCTTCTTCT 59.506 38.462 0.00 0.00 42.09 2.85
78 79 6.688578 TGATGTCTACTACACAACCTTCTTC 58.311 40.000 0.00 0.00 42.09 2.87
79 80 6.665992 TGATGTCTACTACACAACCTTCTT 57.334 37.500 0.00 0.00 42.09 2.52
80 81 6.665992 TTGATGTCTACTACACAACCTTCT 57.334 37.500 0.00 0.00 42.09 2.85
81 82 8.251721 AGTATTGATGTCTACTACACAACCTTC 58.748 37.037 0.00 0.00 42.09 3.46
82 83 8.135382 AGTATTGATGTCTACTACACAACCTT 57.865 34.615 0.00 0.00 42.09 3.50
83 84 7.415318 CGAGTATTGATGTCTACTACACAACCT 60.415 40.741 0.00 0.00 42.09 3.50
84 85 6.691818 CGAGTATTGATGTCTACTACACAACC 59.308 42.308 0.00 0.00 42.09 3.77
85 86 7.470079 TCGAGTATTGATGTCTACTACACAAC 58.530 38.462 0.00 0.00 42.09 3.32
86 87 7.619964 TCGAGTATTGATGTCTACTACACAA 57.380 36.000 0.00 0.00 42.09 3.33
87 88 7.307219 CGATCGAGTATTGATGTCTACTACACA 60.307 40.741 10.26 0.00 39.98 3.72
88 89 7.010606 CGATCGAGTATTGATGTCTACTACAC 58.989 42.308 10.26 0.00 39.98 2.90
89 90 6.927381 TCGATCGAGTATTGATGTCTACTACA 59.073 38.462 15.15 0.00 39.98 2.74
90 91 7.348808 TCGATCGAGTATTGATGTCTACTAC 57.651 40.000 15.15 0.00 39.98 2.73
91 92 7.817962 TGATCGATCGAGTATTGATGTCTACTA 59.182 37.037 23.84 0.00 39.98 1.82
92 93 6.651225 TGATCGATCGAGTATTGATGTCTACT 59.349 38.462 23.84 0.00 39.98 2.57
93 94 6.739100 GTGATCGATCGAGTATTGATGTCTAC 59.261 42.308 23.84 9.36 39.98 2.59
94 95 6.128254 GGTGATCGATCGAGTATTGATGTCTA 60.128 42.308 23.84 1.63 39.98 2.59
95 96 5.335269 GGTGATCGATCGAGTATTGATGTCT 60.335 44.000 23.84 1.18 39.98 3.41
96 97 4.854291 GGTGATCGATCGAGTATTGATGTC 59.146 45.833 23.84 12.66 39.98 3.06
97 98 4.520874 AGGTGATCGATCGAGTATTGATGT 59.479 41.667 23.84 2.57 39.98 3.06
98 99 5.053140 AGGTGATCGATCGAGTATTGATG 57.947 43.478 23.84 0.00 39.98 3.07
99 100 5.303747 GAGGTGATCGATCGAGTATTGAT 57.696 43.478 23.84 4.21 43.46 2.57
100 101 4.750952 GAGGTGATCGATCGAGTATTGA 57.249 45.455 23.84 0.00 32.30 2.57
122 123 2.510238 AGCATGCGAGCGGAGAAC 60.510 61.111 13.01 0.00 40.15 3.01
129 130 2.467826 GGTGAAGGAGCATGCGAGC 61.468 63.158 13.01 5.86 0.00 5.03
132 133 2.825836 GGGGTGAAGGAGCATGCG 60.826 66.667 13.01 0.00 0.00 4.73
133 134 1.452833 GAGGGGTGAAGGAGCATGC 60.453 63.158 10.51 10.51 0.00 4.06
134 135 1.225704 GGAGGGGTGAAGGAGCATG 59.774 63.158 0.00 0.00 0.00 4.06
135 136 0.551131 AAGGAGGGGTGAAGGAGCAT 60.551 55.000 0.00 0.00 0.00 3.79
364 376 9.748708 CCATTAACTTTCTTTCAAAGACATGAA 57.251 29.630 0.00 0.00 37.23 2.57
365 377 8.912988 ACCATTAACTTTCTTTCAAAGACATGA 58.087 29.630 0.00 0.00 37.23 3.07
366 378 9.533253 AACCATTAACTTTCTTTCAAAGACATG 57.467 29.630 0.00 0.00 37.23 3.21
368 380 9.936759 AAAACCATTAACTTTCTTTCAAAGACA 57.063 25.926 0.00 0.00 37.23 3.41
425 437 8.187480 TCAACATTTTCTTCAAATTCGAGAACA 58.813 29.630 0.00 0.00 32.24 3.18
532 546 2.376109 CACTCGAAGGTTCCTAGCCTA 58.624 52.381 0.00 0.00 34.81 3.93
538 552 1.536662 AGCCCACTCGAAGGTTCCT 60.537 57.895 3.19 0.00 0.00 3.36
548 562 0.952984 GACTCTTGTGCAGCCCACTC 60.953 60.000 6.66 0.00 44.92 3.51
581 596 2.475466 CCATCCACTCCGCATGCAC 61.475 63.158 19.57 0.00 0.00 4.57
586 601 1.609210 TGAGTCCATCCACTCCGCA 60.609 57.895 0.00 0.00 42.04 5.69
589 604 1.517832 CCGTGAGTCCATCCACTCC 59.482 63.158 0.00 0.00 42.04 3.85
594 609 0.535335 TTGTAGCCGTGAGTCCATCC 59.465 55.000 0.00 0.00 0.00 3.51
595 610 2.000447 GTTTGTAGCCGTGAGTCCATC 59.000 52.381 0.00 0.00 0.00 3.51
602 621 2.103432 TCCTTCTTGTTTGTAGCCGTGA 59.897 45.455 0.00 0.00 0.00 4.35
622 641 7.496747 TGCTTGGCCCATTTACTATTATTTTC 58.503 34.615 0.00 0.00 0.00 2.29
627 646 6.044989 TCCTATGCTTGGCCCATTTACTATTA 59.955 38.462 0.00 0.00 0.00 0.98
629 648 4.353788 TCCTATGCTTGGCCCATTTACTAT 59.646 41.667 0.00 0.00 0.00 2.12
632 651 2.944129 TCCTATGCTTGGCCCATTTAC 58.056 47.619 0.00 0.00 0.00 2.01
636 655 0.113776 CCATCCTATGCTTGGCCCAT 59.886 55.000 0.00 0.00 0.00 4.00
670 689 2.312390 TGCTACTGTCACTGTACCACA 58.688 47.619 0.00 0.00 0.00 4.17
671 690 3.380479 TTGCTACTGTCACTGTACCAC 57.620 47.619 0.00 0.00 0.00 4.16
672 691 3.639561 TCTTTGCTACTGTCACTGTACCA 59.360 43.478 0.00 0.00 0.00 3.25
673 692 4.238514 CTCTTTGCTACTGTCACTGTACC 58.761 47.826 0.00 0.00 0.00 3.34
674 693 3.675698 GCTCTTTGCTACTGTCACTGTAC 59.324 47.826 0.00 0.00 38.95 2.90
675 694 3.611766 CGCTCTTTGCTACTGTCACTGTA 60.612 47.826 0.00 0.00 40.11 2.74
676 695 2.760374 GCTCTTTGCTACTGTCACTGT 58.240 47.619 0.00 0.00 38.95 3.55
677 696 1.723542 CGCTCTTTGCTACTGTCACTG 59.276 52.381 0.00 0.00 40.11 3.66
678 697 1.937108 GCGCTCTTTGCTACTGTCACT 60.937 52.381 0.00 0.00 40.11 3.41
679 698 0.440371 GCGCTCTTTGCTACTGTCAC 59.560 55.000 0.00 0.00 40.11 3.67
680 699 0.033366 TGCGCTCTTTGCTACTGTCA 59.967 50.000 9.73 0.00 40.11 3.58
681 700 1.325943 GATGCGCTCTTTGCTACTGTC 59.674 52.381 9.73 0.00 40.11 3.51
682 701 1.066573 AGATGCGCTCTTTGCTACTGT 60.067 47.619 9.73 0.00 40.11 3.55
683 702 1.592081 GAGATGCGCTCTTTGCTACTG 59.408 52.381 9.73 0.00 40.61 2.74
684 703 1.933247 GAGATGCGCTCTTTGCTACT 58.067 50.000 9.73 0.00 40.61 2.57
693 712 2.568696 TGTAACAGAGAGATGCGCTC 57.431 50.000 9.73 3.60 44.29 5.03
694 713 2.428530 TGATGTAACAGAGAGATGCGCT 59.571 45.455 9.73 0.00 0.00 5.92
695 714 2.793790 CTGATGTAACAGAGAGATGCGC 59.206 50.000 0.00 0.00 39.94 6.09
696 715 4.298744 TCTGATGTAACAGAGAGATGCG 57.701 45.455 0.00 0.00 41.21 4.73
697 716 5.659463 ACTTCTGATGTAACAGAGAGATGC 58.341 41.667 0.00 0.00 45.63 3.91
698 717 7.277539 GGAAACTTCTGATGTAACAGAGAGATG 59.722 40.741 0.00 0.00 45.63 2.90
699 718 7.327214 GGAAACTTCTGATGTAACAGAGAGAT 58.673 38.462 0.00 0.00 45.63 2.75
700 719 6.295349 GGGAAACTTCTGATGTAACAGAGAGA 60.295 42.308 0.00 0.00 45.63 3.10
701 720 5.872070 GGGAAACTTCTGATGTAACAGAGAG 59.128 44.000 0.00 0.00 45.63 3.20
702 721 5.544176 AGGGAAACTTCTGATGTAACAGAGA 59.456 40.000 0.00 0.00 45.63 3.10
703 722 5.799213 AGGGAAACTTCTGATGTAACAGAG 58.201 41.667 0.00 0.00 45.63 3.35
704 723 5.544176 AGAGGGAAACTTCTGATGTAACAGA 59.456 40.000 0.00 0.00 46.34 3.41
705 724 5.799213 AGAGGGAAACTTCTGATGTAACAG 58.201 41.667 0.00 0.00 46.34 3.16
706 725 5.825593 AGAGGGAAACTTCTGATGTAACA 57.174 39.130 0.00 0.00 46.34 2.41
716 735 2.588027 CCTAGCGAGAGGGAAACTTC 57.412 55.000 0.00 0.00 36.53 3.01
731 750 4.327680 CTCAGGAGGAAACAAAACCCTAG 58.672 47.826 0.00 0.00 0.00 3.02
750 769 1.821216 GGCGACAAAAATCTCCCTCA 58.179 50.000 0.00 0.00 0.00 3.86
752 771 1.305930 GCGGCGACAAAAATCTCCCT 61.306 55.000 12.98 0.00 0.00 4.20
756 775 1.908066 GACGGCGGCGACAAAAATCT 61.908 55.000 38.93 12.27 0.00 2.40
776 795 5.339282 GCAAGAAGTAGGGGATTAGGTTCTT 60.339 44.000 0.00 0.00 34.00 2.52
784 803 1.486726 CGAGGCAAGAAGTAGGGGATT 59.513 52.381 0.00 0.00 0.00 3.01
785 804 1.123928 CGAGGCAAGAAGTAGGGGAT 58.876 55.000 0.00 0.00 0.00 3.85
787 806 1.153349 GCGAGGCAAGAAGTAGGGG 60.153 63.158 0.00 0.00 0.00 4.79
805 826 0.316841 GAGGGATAGAAGCAGCGGAG 59.683 60.000 0.00 0.00 0.00 4.63
826 847 1.300233 CGGAGCGCAGATTCCCTAC 60.300 63.158 11.47 0.00 30.50 3.18
828 849 2.093537 GATCGGAGCGCAGATTCCCT 62.094 60.000 11.47 0.00 30.50 4.20
829 850 1.666234 GATCGGAGCGCAGATTCCC 60.666 63.158 11.47 0.00 30.50 3.97
833 854 0.031857 CTCAAGATCGGAGCGCAGAT 59.968 55.000 11.47 11.69 0.00 2.90
839 860 1.000731 CCATCCTCTCAAGATCGGAGC 59.999 57.143 11.31 0.00 32.38 4.70
899 920 3.659183 AGCCCAATAGCAATCTGAACT 57.341 42.857 0.00 0.00 34.23 3.01
903 924 2.107204 ACCCTAGCCCAATAGCAATCTG 59.893 50.000 0.00 0.00 34.23 2.90
911 933 2.189676 TCGTGAAACCCTAGCCCAATA 58.810 47.619 0.00 0.00 0.00 1.90
963 985 1.588239 TGATCTCTGGTTGGCCTGAT 58.412 50.000 3.32 0.00 41.07 2.90
982 1004 0.394762 ATCAGTGCCGCCACATCATT 60.395 50.000 0.00 0.00 44.53 2.57
1075 1097 1.079543 CAAGAGTGACCCAGCGAGG 60.080 63.158 0.00 0.00 37.03 4.63
1087 1109 4.098914 TGGTATGAACCTTTGCAAGAGT 57.901 40.909 0.00 0.00 46.91 3.24
1188 1212 6.183360 GCACTGAGTAGAGATTATCCTCCAAA 60.183 42.308 0.00 0.00 33.76 3.28
1209 1233 3.456277 CCCCTAAGTAGGAGAATTGCACT 59.544 47.826 5.91 0.00 46.63 4.40
1223 1247 2.319438 ACTCTCTCCCAATCCCCTAAGT 59.681 50.000 0.00 0.00 0.00 2.24
1250 1274 3.628646 AAGTGCCACGGCCCATCTC 62.629 63.158 5.42 0.00 41.09 2.75
1254 1278 2.033448 CTAAAGTGCCACGGCCCA 59.967 61.111 5.42 0.00 41.09 5.36
1303 1329 1.673033 CGTCGAAGGCTTTGTCATCCT 60.673 52.381 14.05 0.00 0.00 3.24
1309 1335 0.179067 TGAACCGTCGAAGGCTTTGT 60.179 50.000 17.91 0.00 33.69 2.83
1323 1349 9.994432 CAGATTTGAATACTATCAAGTTGAACC 57.006 33.333 10.14 0.00 40.21 3.62
1342 1368 3.196039 TCATGGATTTGTGCCCAGATTTG 59.804 43.478 0.00 0.00 35.67 2.32
1344 1370 3.104519 TCATGGATTTGTGCCCAGATT 57.895 42.857 0.00 0.00 35.67 2.40
1393 1419 2.342279 CTTCGCCACAAGGGACGA 59.658 61.111 0.00 0.00 41.32 4.20
1423 1449 0.747255 GAGATAGGCTCTGCGGACAA 59.253 55.000 0.00 0.00 40.61 3.18
1444 1470 3.071602 TGAAAATTTCCCGCAAAATCCCA 59.928 39.130 3.00 0.00 0.00 4.37
1445 1471 3.435327 GTGAAAATTTCCCGCAAAATCCC 59.565 43.478 3.00 0.00 0.00 3.85
1554 1580 8.526147 CACCAATCCAGAAGTTTCTCATATTTT 58.474 33.333 0.00 0.00 34.74 1.82
1718 1745 4.241555 CGCAGCTTCCGCCCCTAT 62.242 66.667 0.00 0.00 36.60 2.57
1729 1756 1.440893 CAGTCTAGCCATCGCAGCT 59.559 57.895 0.00 0.00 44.49 4.24
1734 1761 3.142393 CCCCCAGTCTAGCCATCG 58.858 66.667 0.00 0.00 0.00 3.84
1751 1780 0.807496 GCTTGAGAATCTGCACCACC 59.193 55.000 0.00 0.00 35.87 4.61
1778 1807 1.344763 CTCGTGTTCCCTTCCTTCTGT 59.655 52.381 0.00 0.00 0.00 3.41
1786 1815 1.533469 CCGTCTCCTCGTGTTCCCTT 61.533 60.000 0.00 0.00 0.00 3.95
1793 1822 1.139734 CCATGTCCGTCTCCTCGTG 59.860 63.158 0.00 0.00 0.00 4.35
1795 1824 1.032657 AGTCCATGTCCGTCTCCTCG 61.033 60.000 0.00 0.00 0.00 4.63
1801 1830 0.809385 TCTTCGAGTCCATGTCCGTC 59.191 55.000 0.00 0.00 0.00 4.79
1817 1846 5.779241 TTCCCCTCTGTATCAAACATCTT 57.221 39.130 0.00 0.00 37.50 2.40
1823 1852 6.209774 TCTTCCTATTCCCCTCTGTATCAAA 58.790 40.000 0.00 0.00 0.00 2.69
1852 1881 0.612744 AAGAGAGCTTCTGGTCAGGC 59.387 55.000 0.00 0.00 42.66 4.85
1917 1946 3.164977 TGGAGGGTGACGCCAACA 61.165 61.111 7.48 0.00 46.69 3.33
1927 1956 1.462238 AGGAGCAACAGTGGAGGGT 60.462 57.895 0.00 0.00 0.00 4.34
1960 1989 2.235536 GATCCGCCGGTTTTGACACG 62.236 60.000 1.63 0.00 0.00 4.49
1983 2012 1.305887 CAGTTCGGGACCCCCTACT 60.306 63.158 4.46 2.88 42.67 2.57
2030 2059 3.810941 TGGGTAAAAACATCGTGTCTGTC 59.189 43.478 0.00 0.00 0.00 3.51
2032 2061 3.188460 CCTGGGTAAAAACATCGTGTCTG 59.812 47.826 0.00 0.00 0.00 3.51
2033 2062 3.181448 ACCTGGGTAAAAACATCGTGTCT 60.181 43.478 0.00 0.00 0.00 3.41
2081 2110 8.262601 TCAATATTAATCAAGCAGGAGTAGGA 57.737 34.615 0.00 0.00 0.00 2.94
2198 2227 9.193806 TCTATATAAACCGGACAGTTTTAGTCT 57.806 33.333 9.46 0.00 40.38 3.24
2315 2344 1.410004 TCCTGTGTCCGGATATGACC 58.590 55.000 7.81 0.00 31.60 4.02
2319 2348 3.309296 ACTTCATCCTGTGTCCGGATAT 58.691 45.455 7.81 0.00 39.20 1.63
2320 2349 2.693591 GACTTCATCCTGTGTCCGGATA 59.306 50.000 7.81 0.10 39.20 2.59
2394 2423 2.771943 GGATTAGTGGGTGTCCAGATGA 59.228 50.000 0.00 0.00 45.05 2.92
2399 2428 1.203376 TCCTGGATTAGTGGGTGTCCA 60.203 52.381 0.00 0.00 41.58 4.02
2408 2437 2.316372 ACTGAGGGAGTCCTGGATTAGT 59.684 50.000 9.58 2.88 45.05 2.24
2446 2475 0.673644 CATCGGATCCGGGGCATTAC 60.674 60.000 32.79 0.00 40.25 1.89
2448 2477 2.431683 CATCGGATCCGGGGCATT 59.568 61.111 32.79 9.25 40.25 3.56
2456 2485 4.241555 ACCTGGCGCATCGGATCC 62.242 66.667 10.83 0.00 0.00 3.36
2458 2487 3.740128 GACACCTGGCGCATCGGAT 62.740 63.158 10.83 0.00 0.00 4.18
2469 2500 2.002586 CGAATAACTGGCAGACACCTG 58.997 52.381 23.66 2.78 43.22 4.00
2472 2503 1.394917 CAGCGAATAACTGGCAGACAC 59.605 52.381 23.66 6.68 0.00 3.67
2478 2509 1.076332 AACGACAGCGAATAACTGGC 58.924 50.000 0.00 0.00 39.97 4.85
2479 2510 1.201921 GCAACGACAGCGAATAACTGG 60.202 52.381 0.00 0.00 39.55 4.00
2480 2511 1.201921 GGCAACGACAGCGAATAACTG 60.202 52.381 0.00 0.00 41.64 3.16
2481 2512 1.076332 GGCAACGACAGCGAATAACT 58.924 50.000 0.00 0.00 41.64 2.24
2482 2513 0.793861 TGGCAACGACAGCGAATAAC 59.206 50.000 0.00 0.00 41.64 1.89
2483 2514 1.396648 CATGGCAACGACAGCGAATAA 59.603 47.619 0.00 0.00 41.64 1.40
2484 2515 1.006086 CATGGCAACGACAGCGAATA 58.994 50.000 0.00 0.00 41.64 1.75
2485 2516 0.955428 ACATGGCAACGACAGCGAAT 60.955 50.000 0.00 0.00 41.64 3.34
2486 2517 1.565156 GACATGGCAACGACAGCGAA 61.565 55.000 0.00 0.00 41.64 4.70
2487 2518 2.027073 GACATGGCAACGACAGCGA 61.027 57.895 0.00 0.00 41.64 4.93
2488 2519 1.638388 ATGACATGGCAACGACAGCG 61.638 55.000 4.70 0.00 44.79 5.18
2489 2520 0.523072 AATGACATGGCAACGACAGC 59.477 50.000 4.70 0.00 42.51 4.40
2490 2521 2.587956 CAAATGACATGGCAACGACAG 58.412 47.619 4.70 0.00 42.51 3.51
2491 2522 1.335780 GCAAATGACATGGCAACGACA 60.336 47.619 4.70 0.00 42.51 4.35
2492 2523 1.068333 AGCAAATGACATGGCAACGAC 60.068 47.619 4.70 0.00 42.51 4.34
2493 2524 1.246649 AGCAAATGACATGGCAACGA 58.753 45.000 4.70 0.00 42.51 3.85
2494 2525 1.722464 CAAGCAAATGACATGGCAACG 59.278 47.619 4.70 0.00 42.51 4.10
2495 2526 1.461897 GCAAGCAAATGACATGGCAAC 59.538 47.619 4.70 0.00 0.00 4.17
2496 2527 1.798283 GCAAGCAAATGACATGGCAA 58.202 45.000 4.70 0.00 0.00 4.52
2497 2528 0.388778 CGCAAGCAAATGACATGGCA 60.389 50.000 2.18 2.18 0.00 4.92
2498 2529 0.388907 ACGCAAGCAAATGACATGGC 60.389 50.000 0.00 0.00 45.62 4.40
2499 2530 1.336148 ACACGCAAGCAAATGACATGG 60.336 47.619 0.00 0.00 45.62 3.66
2500 2531 2.054687 ACACGCAAGCAAATGACATG 57.945 45.000 0.00 0.00 45.62 3.21
2501 2532 2.396601 CAACACGCAAGCAAATGACAT 58.603 42.857 0.00 0.00 45.62 3.06
2502 2533 1.837648 CAACACGCAAGCAAATGACA 58.162 45.000 0.00 0.00 45.62 3.58
2503 2534 0.503961 GCAACACGCAAGCAAATGAC 59.496 50.000 0.00 0.00 45.62 3.06
2504 2535 2.884146 GCAACACGCAAGCAAATGA 58.116 47.368 0.00 0.00 45.62 2.57
2514 2545 4.165036 TGACATGATAAAATGCAACACGC 58.835 39.130 0.00 0.00 42.89 5.34
2515 2546 6.028987 TGATGACATGATAAAATGCAACACG 58.971 36.000 0.00 0.00 0.00 4.49
2516 2547 7.997107 ATGATGACATGATAAAATGCAACAC 57.003 32.000 0.00 0.00 35.21 3.32
2531 2562 3.562639 GCAATGCGCATGATGACAT 57.437 47.368 26.09 2.53 41.79 3.06
2543 2574 1.912001 ACACGTATGCAATGCAATGC 58.088 45.000 19.99 19.99 43.62 3.56
2544 2575 2.527087 CGAACACGTATGCAATGCAATG 59.473 45.455 13.45 10.99 43.62 2.82
2545 2576 2.161410 ACGAACACGTATGCAATGCAAT 59.839 40.909 13.45 3.65 38.51 3.56
2546 2577 1.533299 ACGAACACGTATGCAATGCAA 59.467 42.857 13.45 0.00 38.51 4.08
2547 2578 1.127766 GACGAACACGTATGCAATGCA 59.872 47.619 11.44 11.44 40.82 3.96
2548 2579 1.393539 AGACGAACACGTATGCAATGC 59.606 47.619 0.00 0.00 40.41 3.56
2549 2580 2.666022 TGAGACGAACACGTATGCAATG 59.334 45.455 0.00 0.00 40.41 2.82
2550 2581 2.954316 TGAGACGAACACGTATGCAAT 58.046 42.857 0.00 0.00 40.41 3.56
2551 2582 2.425578 TGAGACGAACACGTATGCAA 57.574 45.000 0.00 0.00 40.41 4.08
2552 2583 2.258755 CATGAGACGAACACGTATGCA 58.741 47.619 0.00 0.00 40.41 3.96
2553 2584 1.005975 GCATGAGACGAACACGTATGC 60.006 52.381 11.24 11.24 40.02 3.14
2554 2585 2.258755 TGCATGAGACGAACACGTATG 58.741 47.619 0.00 0.00 40.41 2.39
2555 2586 2.647529 TGCATGAGACGAACACGTAT 57.352 45.000 0.00 0.00 40.41 3.06
2556 2587 2.526077 GATGCATGAGACGAACACGTA 58.474 47.619 2.46 0.00 40.41 3.57
2557 2588 1.350193 GATGCATGAGACGAACACGT 58.650 50.000 2.46 0.00 43.06 4.49
2558 2589 0.647410 GGATGCATGAGACGAACACG 59.353 55.000 2.46 0.00 0.00 4.49
2559 2590 0.647410 CGGATGCATGAGACGAACAC 59.353 55.000 2.46 0.00 0.00 3.32
2560 2591 0.530288 TCGGATGCATGAGACGAACA 59.470 50.000 2.46 0.00 0.00 3.18
2561 2592 1.203928 CTCGGATGCATGAGACGAAC 58.796 55.000 2.46 0.00 34.04 3.95
2562 2593 0.528466 GCTCGGATGCATGAGACGAA 60.528 55.000 16.17 1.71 34.04 3.85
2563 2594 1.066422 GCTCGGATGCATGAGACGA 59.934 57.895 16.17 13.19 34.04 4.20
2564 2595 1.953138 GGCTCGGATGCATGAGACG 60.953 63.158 16.17 10.00 34.04 4.18
2565 2596 0.179062 AAGGCTCGGATGCATGAGAC 60.179 55.000 16.17 13.75 40.72 3.36
2566 2597 0.543277 AAAGGCTCGGATGCATGAGA 59.457 50.000 16.17 8.93 34.04 3.27
2567 2598 1.332997 GAAAAGGCTCGGATGCATGAG 59.667 52.381 2.46 6.82 35.30 2.90
2568 2599 1.382522 GAAAAGGCTCGGATGCATGA 58.617 50.000 2.46 0.00 34.04 3.07
2569 2600 0.383231 GGAAAAGGCTCGGATGCATG 59.617 55.000 2.46 0.00 34.04 4.06
2570 2601 0.753111 GGGAAAAGGCTCGGATGCAT 60.753 55.000 0.00 0.00 34.04 3.96
2571 2602 1.378514 GGGAAAAGGCTCGGATGCA 60.379 57.895 0.00 0.00 34.04 3.96
2572 2603 2.121538 GGGGAAAAGGCTCGGATGC 61.122 63.158 0.00 0.00 0.00 3.91
2573 2604 1.819632 CGGGGAAAAGGCTCGGATG 60.820 63.158 0.00 0.00 0.00 3.51
2574 2605 1.848886 AACGGGGAAAAGGCTCGGAT 61.849 55.000 0.00 0.00 0.00 4.18
2575 2606 2.522367 AACGGGGAAAAGGCTCGGA 61.522 57.895 0.00 0.00 0.00 4.55
2576 2607 2.033602 AACGGGGAAAAGGCTCGG 59.966 61.111 0.00 0.00 0.00 4.63
2577 2608 1.574702 GACAACGGGGAAAAGGCTCG 61.575 60.000 0.00 0.00 0.00 5.03
2578 2609 1.241990 GGACAACGGGGAAAAGGCTC 61.242 60.000 0.00 0.00 0.00 4.70
2579 2610 1.228459 GGACAACGGGGAAAAGGCT 60.228 57.895 0.00 0.00 0.00 4.58
2580 2611 2.622962 CGGACAACGGGGAAAAGGC 61.623 63.158 0.00 0.00 39.42 4.35
2581 2612 3.663202 CGGACAACGGGGAAAAGG 58.337 61.111 0.00 0.00 39.42 3.11
2591 2622 1.404477 CGGATTGCAAAACGGACAAC 58.596 50.000 15.75 0.00 0.00 3.32
2592 2623 3.855630 CGGATTGCAAAACGGACAA 57.144 47.368 15.75 0.00 0.00 3.18
2597 2628 0.991344 GAATGCCGGATTGCAAAACG 59.009 50.000 5.05 16.38 45.84 3.60
2598 2629 1.066929 AGGAATGCCGGATTGCAAAAC 60.067 47.619 5.05 0.26 45.84 2.43
2599 2630 1.265236 AGGAATGCCGGATTGCAAAA 58.735 45.000 5.05 0.00 45.84 2.44
2600 2631 2.136298 TAGGAATGCCGGATTGCAAA 57.864 45.000 5.05 0.00 45.84 3.68
2601 2632 1.955778 CATAGGAATGCCGGATTGCAA 59.044 47.619 5.05 0.00 45.84 4.08
2602 2633 1.133823 ACATAGGAATGCCGGATTGCA 60.134 47.619 5.05 0.00 46.94 4.08
2603 2634 1.537202 GACATAGGAATGCCGGATTGC 59.463 52.381 5.05 7.86 39.96 3.56
2604 2635 2.849942 TGACATAGGAATGCCGGATTG 58.150 47.619 5.05 0.00 39.96 2.67
2605 2636 3.560025 GGATGACATAGGAATGCCGGATT 60.560 47.826 5.05 1.53 39.96 3.01
2606 2637 2.026822 GGATGACATAGGAATGCCGGAT 60.027 50.000 5.05 0.00 39.96 4.18
2607 2638 1.347707 GGATGACATAGGAATGCCGGA 59.652 52.381 5.05 0.00 39.96 5.14
2608 2639 1.813513 GGATGACATAGGAATGCCGG 58.186 55.000 0.00 0.00 39.96 6.13
2609 2640 1.432514 CGGATGACATAGGAATGCCG 58.567 55.000 0.00 0.00 39.96 5.69
2610 2641 1.813513 CCGGATGACATAGGAATGCC 58.186 55.000 0.00 0.00 36.50 4.40
2611 2642 1.160137 GCCGGATGACATAGGAATGC 58.840 55.000 5.05 0.00 36.50 3.56
2612 2643 1.270305 ACGCCGGATGACATAGGAATG 60.270 52.381 5.05 5.01 39.17 2.67
2613 2644 1.000955 GACGCCGGATGACATAGGAAT 59.999 52.381 5.05 1.01 0.00 3.01
2614 2645 0.387929 GACGCCGGATGACATAGGAA 59.612 55.000 5.05 0.00 0.00 3.36
2615 2646 1.461091 GGACGCCGGATGACATAGGA 61.461 60.000 5.05 0.00 0.00 2.94
2616 2647 1.006102 GGACGCCGGATGACATAGG 60.006 63.158 5.05 5.32 0.00 2.57
2617 2648 1.006102 GGGACGCCGGATGACATAG 60.006 63.158 5.05 0.00 0.00 2.23
2618 2649 2.504274 GGGGACGCCGGATGACATA 61.504 63.158 5.05 0.00 0.00 2.29
2619 2650 3.861797 GGGGACGCCGGATGACAT 61.862 66.667 5.05 0.00 0.00 3.06
2621 2652 3.735037 GAAGGGGACGCCGGATGAC 62.735 68.421 5.05 0.00 0.00 3.06
2622 2653 3.467226 GAAGGGGACGCCGGATGA 61.467 66.667 5.05 0.00 0.00 2.92
2623 2654 3.031417 AAGAAGGGGACGCCGGATG 62.031 63.158 5.05 0.00 0.00 3.51
2624 2655 2.687566 AAGAAGGGGACGCCGGAT 60.688 61.111 5.05 0.00 0.00 4.18
2625 2656 3.702048 CAAGAAGGGGACGCCGGA 61.702 66.667 5.05 0.00 0.00 5.14
2628 2659 3.978571 GAGGCAAGAAGGGGACGCC 62.979 68.421 0.00 0.00 43.31 5.68
2629 2660 2.436824 GAGGCAAGAAGGGGACGC 60.437 66.667 0.00 0.00 0.00 5.19
2630 2661 1.219393 GAGAGGCAAGAAGGGGACG 59.781 63.158 0.00 0.00 0.00 4.79
2631 2662 0.988063 AAGAGAGGCAAGAAGGGGAC 59.012 55.000 0.00 0.00 0.00 4.46
2632 2663 1.280457 GAAGAGAGGCAAGAAGGGGA 58.720 55.000 0.00 0.00 0.00 4.81
2633 2664 0.107945 CGAAGAGAGGCAAGAAGGGG 60.108 60.000 0.00 0.00 0.00 4.79
2634 2665 0.610687 ACGAAGAGAGGCAAGAAGGG 59.389 55.000 0.00 0.00 0.00 3.95
2635 2666 1.001406 ACACGAAGAGAGGCAAGAAGG 59.999 52.381 0.00 0.00 0.00 3.46
2636 2667 2.064762 CACACGAAGAGAGGCAAGAAG 58.935 52.381 0.00 0.00 0.00 2.85
2637 2668 1.873903 GCACACGAAGAGAGGCAAGAA 60.874 52.381 0.00 0.00 0.00 2.52
2638 2669 0.319900 GCACACGAAGAGAGGCAAGA 60.320 55.000 0.00 0.00 0.00 3.02
2639 2670 1.621301 CGCACACGAAGAGAGGCAAG 61.621 60.000 0.00 0.00 43.93 4.01
2640 2671 1.664649 CGCACACGAAGAGAGGCAA 60.665 57.895 0.00 0.00 43.93 4.52
2641 2672 2.049156 CGCACACGAAGAGAGGCA 60.049 61.111 0.00 0.00 43.93 4.75
2642 2673 2.811317 CCGCACACGAAGAGAGGC 60.811 66.667 0.00 0.00 43.93 4.70
2643 2674 1.592400 TACCCGCACACGAAGAGAGG 61.592 60.000 0.00 0.00 43.93 3.69
2644 2675 0.456221 ATACCCGCACACGAAGAGAG 59.544 55.000 0.00 0.00 43.93 3.20
2645 2676 0.892755 AATACCCGCACACGAAGAGA 59.107 50.000 0.00 0.00 43.93 3.10
2646 2677 2.572191 TAATACCCGCACACGAAGAG 57.428 50.000 0.00 0.00 43.93 2.85
2647 2678 2.995258 GTTTAATACCCGCACACGAAGA 59.005 45.455 0.00 0.00 43.93 2.87
2648 2679 2.997986 AGTTTAATACCCGCACACGAAG 59.002 45.455 0.00 0.00 43.93 3.79
2649 2680 3.042871 AGTTTAATACCCGCACACGAA 57.957 42.857 0.00 0.00 43.93 3.85
2650 2681 2.747396 AGTTTAATACCCGCACACGA 57.253 45.000 0.00 0.00 43.93 4.35
2651 2682 3.434299 AGAAAGTTTAATACCCGCACACG 59.566 43.478 0.00 0.00 39.67 4.49
2652 2683 4.435121 CGAGAAAGTTTAATACCCGCACAC 60.435 45.833 0.00 0.00 0.00 3.82
2653 2684 3.680937 CGAGAAAGTTTAATACCCGCACA 59.319 43.478 0.00 0.00 0.00 4.57
2654 2685 3.063045 CCGAGAAAGTTTAATACCCGCAC 59.937 47.826 0.00 0.00 0.00 5.34
2655 2686 3.055963 TCCGAGAAAGTTTAATACCCGCA 60.056 43.478 0.00 0.00 0.00 5.69
2656 2687 3.524541 TCCGAGAAAGTTTAATACCCGC 58.475 45.455 0.00 0.00 0.00 6.13
2657 2688 5.007332 CCATTCCGAGAAAGTTTAATACCCG 59.993 44.000 0.00 0.00 0.00 5.28
2658 2689 5.220989 GCCATTCCGAGAAAGTTTAATACCC 60.221 44.000 0.00 0.00 0.00 3.69
2659 2690 5.220989 GGCCATTCCGAGAAAGTTTAATACC 60.221 44.000 0.00 0.00 0.00 2.73
2660 2691 5.220989 GGGCCATTCCGAGAAAGTTTAATAC 60.221 44.000 4.39 0.00 34.94 1.89
2661 2692 4.885325 GGGCCATTCCGAGAAAGTTTAATA 59.115 41.667 4.39 0.00 34.94 0.98
2662 2693 3.699538 GGGCCATTCCGAGAAAGTTTAAT 59.300 43.478 4.39 0.00 34.94 1.40
2663 2694 3.086282 GGGCCATTCCGAGAAAGTTTAA 58.914 45.455 4.39 0.00 34.94 1.52
2664 2695 2.718563 GGGCCATTCCGAGAAAGTTTA 58.281 47.619 4.39 0.00 34.94 2.01
2665 2696 1.545841 GGGCCATTCCGAGAAAGTTT 58.454 50.000 4.39 0.00 34.94 2.66
2666 2697 3.266240 GGGCCATTCCGAGAAAGTT 57.734 52.632 4.39 0.00 34.94 2.66
2675 2706 1.320344 GGAAAACCTCGGGCCATTCC 61.320 60.000 4.39 3.50 0.00 3.01
2676 2707 0.610785 TGGAAAACCTCGGGCCATTC 60.611 55.000 4.39 0.00 0.00 2.67
2677 2708 0.178947 TTGGAAAACCTCGGGCCATT 60.179 50.000 4.39 0.00 0.00 3.16
2678 2709 0.611896 CTTGGAAAACCTCGGGCCAT 60.612 55.000 4.39 0.00 0.00 4.40
2679 2710 1.228429 CTTGGAAAACCTCGGGCCA 60.228 57.895 4.39 0.00 0.00 5.36
2680 2711 2.636412 GCTTGGAAAACCTCGGGCC 61.636 63.158 0.00 0.00 0.00 5.80
2681 2712 2.962569 GCTTGGAAAACCTCGGGC 59.037 61.111 0.00 0.00 0.00 6.13
2682 2713 2.332654 CCGCTTGGAAAACCTCGGG 61.333 63.158 0.00 0.00 33.85 5.14
2683 2714 2.978018 GCCGCTTGGAAAACCTCGG 61.978 63.158 0.00 0.00 39.81 4.63
2684 2715 2.561373 GCCGCTTGGAAAACCTCG 59.439 61.111 0.00 0.00 33.02 4.63
2685 2716 1.179174 AAGGCCGCTTGGAAAACCTC 61.179 55.000 0.00 0.00 33.02 3.85
2686 2717 1.152546 AAGGCCGCTTGGAAAACCT 60.153 52.632 0.00 0.00 33.02 3.50
2687 2718 1.006220 CAAGGCCGCTTGGAAAACC 60.006 57.895 0.00 0.00 33.02 3.27
2688 2719 4.653555 CAAGGCCGCTTGGAAAAC 57.346 55.556 0.00 0.00 33.02 2.43
2694 2725 1.400494 GTGTTATACCAAGGCCGCTTG 59.600 52.381 0.00 0.00 0.00 4.01
2695 2726 1.746470 GTGTTATACCAAGGCCGCTT 58.254 50.000 0.00 0.00 0.00 4.68
2696 2727 3.471354 GTGTTATACCAAGGCCGCT 57.529 52.632 0.00 0.00 0.00 5.52
2721 2752 1.567504 CACGAAACTTGACAGACGGT 58.432 50.000 0.00 0.00 0.00 4.83
2722 2753 0.232303 GCACGAAACTTGACAGACGG 59.768 55.000 0.00 0.00 0.00 4.79
2723 2754 0.232303 GGCACGAAACTTGACAGACG 59.768 55.000 0.00 0.00 0.00 4.18
2724 2755 1.295792 TGGCACGAAACTTGACAGAC 58.704 50.000 0.00 0.00 0.00 3.51
2725 2756 3.770625 TGGCACGAAACTTGACAGA 57.229 47.368 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.