Multiple sequence alignment - TraesCS5B01G177500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G177500 chr5B 100.000 4587 0 0 1 4587 323880539 323885125 0.000000e+00 8471.0
1 TraesCS5B01G177500 chr5D 89.149 1539 61 34 76 1550 285677036 285678532 0.000000e+00 1820.0
2 TraesCS5B01G177500 chr5D 93.161 892 31 11 3398 4262 285680292 285681180 0.000000e+00 1282.0
3 TraesCS5B01G177500 chr5D 93.059 778 37 8 2077 2845 285678699 285679468 0.000000e+00 1122.0
4 TraesCS5B01G177500 chr5D 88.845 502 21 11 2903 3400 285679553 285680023 6.610000e-163 584.0
5 TraesCS5B01G177500 chr5D 93.258 178 11 1 1628 1804 285678525 285678702 1.270000e-65 261.0
6 TraesCS5B01G177500 chr5D 96.667 60 2 0 4528 4587 285681182 285681241 2.920000e-17 100.0
7 TraesCS5B01G177500 chr5D 92.308 52 4 0 2831 2882 285679508 285679559 1.770000e-09 75.0
8 TraesCS5B01G177500 chr5A 91.549 1065 52 15 2143 3207 377939520 377940546 0.000000e+00 1434.0
9 TraesCS5B01G177500 chr5A 91.324 1095 26 18 139 1188 377937927 377938997 0.000000e+00 1432.0
10 TraesCS5B01G177500 chr5A 91.908 1001 40 19 3289 4262 377940546 377941532 0.000000e+00 1362.0
11 TraesCS5B01G177500 chr5A 94.220 346 15 2 1210 1550 377938981 377939326 1.460000e-144 523.0
12 TraesCS5B01G177500 chr5A 96.875 288 8 1 1801 2087 591365460 591365173 8.930000e-132 481.0
13 TraesCS5B01G177500 chr5A 93.785 177 11 0 1628 1804 377939319 377939495 2.720000e-67 267.0
14 TraesCS5B01G177500 chr5A 87.500 96 10 2 1547 1641 431786206 431786300 4.850000e-20 110.0
15 TraesCS5B01G177500 chr5A 85.000 100 14 1 1553 1652 706159050 706158952 2.920000e-17 100.0
16 TraesCS5B01G177500 chr5A 89.855 69 2 1 37 100 377937857 377937925 2.940000e-12 84.2
17 TraesCS5B01G177500 chr6B 98.925 279 3 0 1802 2080 523063981 523064259 2.460000e-137 499.0
18 TraesCS5B01G177500 chr6B 93.382 272 18 0 4260 4531 309685941 309685670 1.990000e-108 403.0
19 TraesCS5B01G177500 chr4B 98.921 278 3 0 1801 2078 608622552 608622829 8.860000e-137 497.0
20 TraesCS5B01G177500 chr7A 97.578 289 5 2 1798 2085 14291852 14291565 1.150000e-135 494.0
21 TraesCS5B01G177500 chr7A 98.214 280 5 0 1802 2081 78662668 78662947 1.480000e-134 490.0
22 TraesCS5B01G177500 chr7A 96.309 298 8 2 1802 2096 659589822 659589525 1.920000e-133 486.0
23 TraesCS5B01G177500 chr2B 98.909 275 3 0 1804 2078 778840608 778840334 4.120000e-135 492.0
24 TraesCS5B01G177500 chr2A 98.201 278 5 0 1801 2078 768259951 768260228 1.920000e-133 486.0
25 TraesCS5B01G177500 chr2A 95.652 46 2 0 4542 4587 417102883 417102838 1.770000e-09 75.0
26 TraesCS5B01G177500 chr4A 97.857 280 5 1 1804 2083 16241483 16241205 2.480000e-132 483.0
27 TraesCS5B01G177500 chr4A 87.640 89 8 2 1546 1633 719728061 719727975 2.920000e-17 100.0
28 TraesCS5B01G177500 chr1B 96.642 268 8 1 4267 4533 412369781 412369514 1.170000e-120 444.0
29 TraesCS5B01G177500 chr1B 94.717 265 14 0 4267 4531 505094212 505094476 3.300000e-111 412.0
30 TraesCS5B01G177500 chr1B 92.958 284 16 4 4268 4549 252161922 252161641 1.190000e-110 411.0
31 TraesCS5B01G177500 chr6A 94.834 271 14 0 4261 4531 605860322 605860052 1.530000e-114 424.0
32 TraesCS5B01G177500 chr6A 88.750 80 7 1 1547 1626 18652486 18652563 3.780000e-16 97.1
33 TraesCS5B01G177500 chr3A 94.382 267 14 1 4259 4524 12408724 12408990 4.270000e-110 409.0
34 TraesCS5B01G177500 chr3A 93.985 266 15 1 4259 4524 688425988 688426252 7.150000e-108 401.0
35 TraesCS5B01G177500 chr3A 95.652 69 2 1 1560 1627 638067690 638067758 4.850000e-20 110.0
36 TraesCS5B01G177500 chr3A 86.022 93 9 4 1547 1637 431818536 431818446 3.780000e-16 97.1
37 TraesCS5B01G177500 chr7D 94.981 259 13 0 4266 4524 445953833 445954091 1.540000e-109 407.0
38 TraesCS5B01G177500 chr3B 94.340 265 15 0 4267 4531 237329538 237329802 1.540000e-109 407.0
39 TraesCS5B01G177500 chrUn 87.640 89 8 2 1546 1633 471786191 471786105 2.920000e-17 100.0
40 TraesCS5B01G177500 chrUn 84.211 95 12 2 1540 1633 77893555 77893463 6.320000e-14 89.8
41 TraesCS5B01G177500 chr3D 85.714 91 10 3 1547 1636 39337577 39337489 4.890000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G177500 chr5B 323880539 323885125 4586 False 8471.000000 8471 100.000000 1 4587 1 chr5B.!!$F1 4586
1 TraesCS5B01G177500 chr5D 285677036 285681241 4205 False 749.142857 1820 92.349571 76 4587 7 chr5D.!!$F1 4511
2 TraesCS5B01G177500 chr5A 377937857 377941532 3675 False 850.366667 1434 92.106833 37 4262 6 chr5A.!!$F2 4225

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
632 669 1.128507 CACACAGACACACACACACAC 59.871 52.381 0.0 0.0 0.00 3.82 F
1760 1857 0.039165 CGAAAAGCCCAGCAAGGAAC 60.039 55.000 0.0 0.0 41.22 3.62 F
1962 2059 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.0 0.0 0.00 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 2040 0.034756 CCGGAACATCACACACTCCA 59.965 55.0 0.0 0.0 0.0 3.86 R
2907 3070 1.043816 CACGCTCCTCCATCACCTAT 58.956 55.0 0.0 0.0 0.0 2.57 R
3958 4435 0.108992 GGCGACGACACTCATGGTTA 60.109 55.0 0.0 0.0 0.0 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 7.894376 TGGATGTACCTAAAACTAAAAGACG 57.106 36.000 0.00 0.00 39.86 4.18
34 35 7.444299 TGGATGTACCTAAAACTAAAAGACGT 58.556 34.615 0.00 0.00 39.86 4.34
35 36 7.599998 TGGATGTACCTAAAACTAAAAGACGTC 59.400 37.037 7.70 7.70 39.86 4.34
71 72 1.807142 GGAGGTAGCAAAACAGAGCAC 59.193 52.381 0.00 0.00 0.00 4.40
92 98 3.043586 CGCATGTAGGACTAACTAAGCG 58.956 50.000 0.00 0.00 35.91 4.68
133 139 4.469657 ACCACACACACATGGAACTAATT 58.530 39.130 0.00 0.00 39.46 1.40
145 151 9.093970 CACATGGAACTAATTAAACGATCACTA 57.906 33.333 0.00 0.00 0.00 2.74
146 152 9.314321 ACATGGAACTAATTAAACGATCACTAG 57.686 33.333 0.00 0.00 0.00 2.57
150 156 7.042658 GGAACTAATTAAACGATCACTAGGCAG 60.043 40.741 0.00 0.00 0.00 4.85
155 161 4.640789 AAACGATCACTAGGCAGAGTAG 57.359 45.455 0.00 0.00 0.00 2.57
203 220 5.986741 TGCCATAAAGATAAAATGCATGCAG 59.013 36.000 26.69 7.95 0.00 4.41
238 255 3.119531 TCGTGAATATGCCAAAAAGCTGG 60.120 43.478 0.00 0.00 39.71 4.85
243 260 1.648116 ATGCCAAAAAGCTGGGACAT 58.352 45.000 0.00 0.00 39.94 3.06
311 328 3.765026 CAACGTTAAGGTTGTTGCAAGT 58.235 40.909 25.67 0.00 41.77 3.16
312 329 3.414549 ACGTTAAGGTTGTTGCAAGTG 57.585 42.857 0.00 0.00 0.00 3.16
313 330 2.750712 ACGTTAAGGTTGTTGCAAGTGT 59.249 40.909 0.00 0.00 0.00 3.55
314 331 3.181504 ACGTTAAGGTTGTTGCAAGTGTC 60.182 43.478 0.00 0.00 0.00 3.67
315 332 3.181505 CGTTAAGGTTGTTGCAAGTGTCA 60.182 43.478 0.00 0.00 0.00 3.58
316 333 2.939460 AAGGTTGTTGCAAGTGTCAC 57.061 45.000 0.00 0.00 0.00 3.67
317 334 2.128771 AGGTTGTTGCAAGTGTCACT 57.871 45.000 0.00 0.00 0.00 3.41
419 436 1.323412 AGCTCGCTTCCTCGATACAT 58.677 50.000 0.00 0.00 37.87 2.29
632 669 1.128507 CACACAGACACACACACACAC 59.871 52.381 0.00 0.00 0.00 3.82
633 670 1.270571 ACACAGACACACACACACACA 60.271 47.619 0.00 0.00 0.00 3.72
653 690 2.095372 CAGTCATACATGCACACTGCTG 59.905 50.000 0.00 0.00 45.31 4.41
654 691 2.027837 AGTCATACATGCACACTGCTGA 60.028 45.455 0.00 0.00 45.31 4.26
655 692 2.941064 GTCATACATGCACACTGCTGAT 59.059 45.455 0.00 0.00 45.31 2.90
656 693 3.002042 GTCATACATGCACACTGCTGATC 59.998 47.826 0.00 0.00 45.31 2.92
764 803 3.118261 GGAATAGATGGCTGGTGAAGTGA 60.118 47.826 0.00 0.00 0.00 3.41
834 880 4.642885 CCACTTGTCTCTTAGCTAGCTAGT 59.357 45.833 23.03 14.60 0.00 2.57
836 882 6.017440 CCACTTGTCTCTTAGCTAGCTAGTAG 60.017 46.154 23.03 21.95 0.00 2.57
877 923 2.763273 GCATGCATGCGTGGTGCTA 61.763 57.895 34.64 7.29 44.67 3.49
922 974 1.392589 ATTGGTTGCCTAAGCCATCG 58.607 50.000 0.00 0.00 38.69 3.84
1056 1113 5.467668 CCTCCCCTAAGGTTTAGGAAATT 57.532 43.478 14.87 0.00 36.85 1.82
1060 1117 7.345958 TCCCCTAAGGTTTAGGAAATTACAA 57.654 36.000 14.87 0.00 36.85 2.41
1061 1118 7.946381 TCCCCTAAGGTTTAGGAAATTACAAT 58.054 34.615 14.87 0.00 36.85 2.71
1062 1119 7.837187 TCCCCTAAGGTTTAGGAAATTACAATG 59.163 37.037 14.87 0.00 36.85 2.82
1063 1120 7.417456 CCCCTAAGGTTTAGGAAATTACAATGC 60.417 40.741 14.87 0.00 36.85 3.56
1361 1446 6.593978 TCTTTTCTAGTTAGACGTACGTCAC 58.406 40.000 40.48 31.94 46.76 3.67
1370 1455 7.459486 AGTTAGACGTACGTCACTTTGTATAG 58.541 38.462 40.48 2.26 46.76 1.31
1492 1587 1.059913 AGTGGTCAAGGCAAGCTACT 58.940 50.000 0.00 0.00 0.00 2.57
1497 1592 3.326588 TGGTCAAGGCAAGCTACTCTTTA 59.673 43.478 0.00 0.00 31.27 1.85
1524 1619 4.513692 GTCGGCTTGCACATATTTATGGTA 59.486 41.667 2.85 0.00 38.00 3.25
1525 1620 4.513692 TCGGCTTGCACATATTTATGGTAC 59.486 41.667 2.85 0.00 38.00 3.34
1527 1622 4.320202 GGCTTGCACATATTTATGGTACGG 60.320 45.833 2.85 0.00 38.00 4.02
1531 1626 3.562141 GCACATATTTATGGTACGGCACA 59.438 43.478 2.85 0.00 38.00 4.57
1537 1632 2.839043 TATGGTACGGCACACACGGC 62.839 60.000 0.00 0.00 35.23 5.68
1544 1640 0.239879 CGGCACACACGGCTTAAAAT 59.760 50.000 0.00 0.00 0.00 1.82
1549 1645 4.334481 GGCACACACGGCTTAAAATATACT 59.666 41.667 0.00 0.00 0.00 2.12
1550 1646 5.499047 GCACACACGGCTTAAAATATACTC 58.501 41.667 0.00 0.00 0.00 2.59
1551 1647 5.293569 GCACACACGGCTTAAAATATACTCT 59.706 40.000 0.00 0.00 0.00 3.24
1552 1648 6.509677 GCACACACGGCTTAAAATATACTCTC 60.510 42.308 0.00 0.00 0.00 3.20
1553 1649 6.757010 CACACACGGCTTAAAATATACTCTCT 59.243 38.462 0.00 0.00 0.00 3.10
1554 1650 6.979238 ACACACGGCTTAAAATATACTCTCTC 59.021 38.462 0.00 0.00 0.00 3.20
1555 1651 6.421202 CACACGGCTTAAAATATACTCTCTCC 59.579 42.308 0.00 0.00 0.00 3.71
1556 1652 6.097839 ACACGGCTTAAAATATACTCTCTCCA 59.902 38.462 0.00 0.00 0.00 3.86
1557 1653 7.155328 CACGGCTTAAAATATACTCTCTCCAT 58.845 38.462 0.00 0.00 0.00 3.41
1558 1654 7.116948 CACGGCTTAAAATATACTCTCTCCATG 59.883 40.741 0.00 0.00 0.00 3.66
1559 1655 7.015292 ACGGCTTAAAATATACTCTCTCCATGA 59.985 37.037 0.00 0.00 0.00 3.07
1560 1656 7.872993 CGGCTTAAAATATACTCTCTCCATGAA 59.127 37.037 0.00 0.00 0.00 2.57
1561 1657 9.561069 GGCTTAAAATATACTCTCTCCATGAAA 57.439 33.333 0.00 0.00 0.00 2.69
1593 1689 7.676683 TGAGCATTTAGATCCCTACTTTAGT 57.323 36.000 0.00 0.00 0.00 2.24
1594 1690 7.500992 TGAGCATTTAGATCCCTACTTTAGTG 58.499 38.462 0.00 0.00 0.00 2.74
1595 1691 7.344612 TGAGCATTTAGATCCCTACTTTAGTGA 59.655 37.037 0.00 0.00 0.00 3.41
1596 1692 8.268878 AGCATTTAGATCCCTACTTTAGTGAT 57.731 34.615 0.00 0.00 0.00 3.06
1597 1693 8.371699 AGCATTTAGATCCCTACTTTAGTGATC 58.628 37.037 0.00 0.00 0.00 2.92
1598 1694 8.371699 GCATTTAGATCCCTACTTTAGTGATCT 58.628 37.037 11.43 11.43 33.27 2.75
1607 1703 9.710818 TCCCTACTTTAGTGATCTATAAACACT 57.289 33.333 0.00 0.00 45.06 3.55
1608 1704 9.968870 CCCTACTTTAGTGATCTATAAACACTC 57.031 37.037 0.00 0.00 42.65 3.51
1759 1856 1.178534 CCGAAAAGCCCAGCAAGGAA 61.179 55.000 0.00 0.00 41.22 3.36
1760 1857 0.039165 CGAAAAGCCCAGCAAGGAAC 60.039 55.000 0.00 0.00 41.22 3.62
1800 1897 1.538950 AGAAGAACGTCACCGAGGTAC 59.461 52.381 0.00 0.00 37.88 3.34
1804 1901 2.746362 AGAACGTCACCGAGGTACTAAG 59.254 50.000 0.00 0.00 41.55 2.18
1805 1902 1.457346 ACGTCACCGAGGTACTAAGG 58.543 55.000 0.00 0.00 41.55 2.69
1806 1903 0.100146 CGTCACCGAGGTACTAAGGC 59.900 60.000 0.00 0.00 41.55 4.35
1809 1906 0.460311 CACCGAGGTACTAAGGCTGG 59.540 60.000 0.00 0.00 41.55 4.85
1810 1907 0.040794 ACCGAGGTACTAAGGCTGGT 59.959 55.000 0.00 0.00 41.55 4.00
1811 1908 0.745468 CCGAGGTACTAAGGCTGGTC 59.255 60.000 0.00 0.00 41.55 4.02
1812 1909 1.471119 CGAGGTACTAAGGCTGGTCA 58.529 55.000 0.00 0.00 41.55 4.02
1813 1910 1.134560 CGAGGTACTAAGGCTGGTCAC 59.865 57.143 0.00 0.00 41.55 3.67
1814 1911 2.176889 GAGGTACTAAGGCTGGTCACA 58.823 52.381 0.00 0.00 41.55 3.58
1815 1912 2.565834 GAGGTACTAAGGCTGGTCACAA 59.434 50.000 0.00 0.00 41.55 3.33
1816 1913 3.182152 AGGTACTAAGGCTGGTCACAAT 58.818 45.455 0.00 0.00 36.02 2.71
1817 1914 3.055094 AGGTACTAAGGCTGGTCACAATG 60.055 47.826 0.00 0.00 36.02 2.82
1818 1915 2.496899 ACTAAGGCTGGTCACAATGG 57.503 50.000 0.00 0.00 0.00 3.16
1819 1916 1.004745 ACTAAGGCTGGTCACAATGGG 59.995 52.381 0.00 0.00 0.00 4.00
1820 1917 0.323360 TAAGGCTGGTCACAATGGGC 60.323 55.000 0.00 0.00 0.00 5.36
1821 1918 2.283101 GGCTGGTCACAATGGGCA 60.283 61.111 0.00 0.00 0.00 5.36
1822 1919 1.907807 GGCTGGTCACAATGGGCAA 60.908 57.895 0.00 0.00 0.00 4.52
1823 1920 1.588082 GCTGGTCACAATGGGCAAG 59.412 57.895 0.00 0.00 0.00 4.01
1824 1921 0.895100 GCTGGTCACAATGGGCAAGA 60.895 55.000 0.00 0.00 0.00 3.02
1825 1922 1.619654 CTGGTCACAATGGGCAAGAA 58.380 50.000 0.00 0.00 0.00 2.52
1826 1923 1.270550 CTGGTCACAATGGGCAAGAAC 59.729 52.381 0.00 0.00 0.00 3.01
1827 1924 1.327303 GGTCACAATGGGCAAGAACA 58.673 50.000 0.00 0.00 0.00 3.18
1828 1925 1.895131 GGTCACAATGGGCAAGAACAT 59.105 47.619 0.00 0.00 0.00 2.71
1829 1926 3.088532 GGTCACAATGGGCAAGAACATA 58.911 45.455 0.00 0.00 0.00 2.29
1830 1927 3.129287 GGTCACAATGGGCAAGAACATAG 59.871 47.826 0.00 0.00 0.00 2.23
1831 1928 3.758554 GTCACAATGGGCAAGAACATAGT 59.241 43.478 0.00 0.00 0.00 2.12
1832 1929 4.009675 TCACAATGGGCAAGAACATAGTC 58.990 43.478 0.00 0.00 0.00 2.59
1833 1930 4.012374 CACAATGGGCAAGAACATAGTCT 58.988 43.478 0.00 0.00 0.00 3.24
1834 1931 5.045942 TCACAATGGGCAAGAACATAGTCTA 60.046 40.000 0.00 0.00 0.00 2.59
1835 1932 5.295292 CACAATGGGCAAGAACATAGTCTAG 59.705 44.000 0.00 0.00 0.00 2.43
1836 1933 5.045578 ACAATGGGCAAGAACATAGTCTAGT 60.046 40.000 0.00 0.00 0.00 2.57
1837 1934 6.156256 ACAATGGGCAAGAACATAGTCTAGTA 59.844 38.462 0.00 0.00 0.00 1.82
1838 1935 6.808321 ATGGGCAAGAACATAGTCTAGTAA 57.192 37.500 0.00 0.00 0.00 2.24
1839 1936 5.974108 TGGGCAAGAACATAGTCTAGTAAC 58.026 41.667 0.00 0.00 0.00 2.50
1840 1937 5.720041 TGGGCAAGAACATAGTCTAGTAACT 59.280 40.000 0.00 0.00 0.00 2.24
1841 1938 6.212791 TGGGCAAGAACATAGTCTAGTAACTT 59.787 38.462 0.00 0.00 0.00 2.66
1842 1939 7.398047 TGGGCAAGAACATAGTCTAGTAACTTA 59.602 37.037 0.00 0.00 0.00 2.24
1843 1940 7.705752 GGGCAAGAACATAGTCTAGTAACTTAC 59.294 40.741 0.00 0.00 0.00 2.34
1844 1941 8.248945 GGCAAGAACATAGTCTAGTAACTTACA 58.751 37.037 1.79 0.00 0.00 2.41
1845 1942 9.074443 GCAAGAACATAGTCTAGTAACTTACAC 57.926 37.037 1.79 0.00 0.00 2.90
1848 1945 9.517868 AGAACATAGTCTAGTAACTTACACACT 57.482 33.333 1.79 3.11 0.00 3.55
1852 1949 9.570488 CATAGTCTAGTAACTTACACACTTTCC 57.430 37.037 1.79 0.00 0.00 3.13
1853 1950 7.836479 AGTCTAGTAACTTACACACTTTCCT 57.164 36.000 1.79 0.00 0.00 3.36
1854 1951 8.930846 AGTCTAGTAACTTACACACTTTCCTA 57.069 34.615 1.79 0.00 0.00 2.94
1855 1952 9.012161 AGTCTAGTAACTTACACACTTTCCTAG 57.988 37.037 1.79 0.00 0.00 3.02
1856 1953 9.007901 GTCTAGTAACTTACACACTTTCCTAGA 57.992 37.037 1.79 0.00 0.00 2.43
1857 1954 9.007901 TCTAGTAACTTACACACTTTCCTAGAC 57.992 37.037 1.79 0.00 0.00 2.59
1858 1955 7.836479 AGTAACTTACACACTTTCCTAGACT 57.164 36.000 1.79 0.00 0.00 3.24
1859 1956 8.930846 AGTAACTTACACACTTTCCTAGACTA 57.069 34.615 1.79 0.00 0.00 2.59
1860 1957 9.531158 AGTAACTTACACACTTTCCTAGACTAT 57.469 33.333 1.79 0.00 0.00 2.12
1861 1958 9.570488 GTAACTTACACACTTTCCTAGACTATG 57.430 37.037 0.00 0.00 0.00 2.23
1862 1959 7.778185 ACTTACACACTTTCCTAGACTATGT 57.222 36.000 0.00 0.00 0.00 2.29
1863 1960 8.191534 ACTTACACACTTTCCTAGACTATGTT 57.808 34.615 0.00 0.00 0.00 2.71
1864 1961 9.305555 ACTTACACACTTTCCTAGACTATGTTA 57.694 33.333 0.00 0.00 0.00 2.41
1865 1962 9.570488 CTTACACACTTTCCTAGACTATGTTAC 57.430 37.037 0.00 0.00 0.00 2.50
1866 1963 7.778185 ACACACTTTCCTAGACTATGTTACT 57.222 36.000 0.00 0.00 0.00 2.24
1867 1964 8.874744 ACACACTTTCCTAGACTATGTTACTA 57.125 34.615 0.00 0.00 0.00 1.82
1868 1965 8.738106 ACACACTTTCCTAGACTATGTTACTAC 58.262 37.037 0.00 0.00 0.00 2.73
1869 1966 8.189460 CACACTTTCCTAGACTATGTTACTACC 58.811 40.741 0.00 0.00 0.00 3.18
1870 1967 8.114743 ACACTTTCCTAGACTATGTTACTACCT 58.885 37.037 0.00 0.00 0.00 3.08
1871 1968 8.623030 CACTTTCCTAGACTATGTTACTACCTC 58.377 40.741 0.00 0.00 0.00 3.85
1872 1969 7.779326 ACTTTCCTAGACTATGTTACTACCTCC 59.221 40.741 0.00 0.00 0.00 4.30
1873 1970 6.836714 TCCTAGACTATGTTACTACCTCCA 57.163 41.667 0.00 0.00 0.00 3.86
1874 1971 6.599445 TCCTAGACTATGTTACTACCTCCAC 58.401 44.000 0.00 0.00 0.00 4.02
1875 1972 6.159222 TCCTAGACTATGTTACTACCTCCACA 59.841 42.308 0.00 0.00 0.00 4.17
1876 1973 6.487331 CCTAGACTATGTTACTACCTCCACAG 59.513 46.154 0.00 0.00 0.00 3.66
1877 1974 5.828871 AGACTATGTTACTACCTCCACAGT 58.171 41.667 0.00 0.00 0.00 3.55
1878 1975 5.652891 AGACTATGTTACTACCTCCACAGTG 59.347 44.000 0.00 0.00 0.00 3.66
1879 1976 4.710375 ACTATGTTACTACCTCCACAGTGG 59.290 45.833 14.19 14.19 39.43 4.00
1880 1977 2.253610 TGTTACTACCTCCACAGTGGG 58.746 52.381 20.14 10.16 38.32 4.61
1881 1978 2.254508 GTTACTACCTCCACAGTGGGT 58.745 52.381 20.14 12.79 38.32 4.51
1882 1979 3.181419 TGTTACTACCTCCACAGTGGGTA 60.181 47.826 20.14 13.24 38.32 3.69
1884 1981 1.486211 CTACCTCCACAGTGGGTAGG 58.514 60.000 21.22 21.22 45.09 3.18
1885 1982 1.006758 CTACCTCCACAGTGGGTAGGA 59.993 57.143 27.21 13.73 45.09 2.94
1886 1983 0.192566 ACCTCCACAGTGGGTAGGAA 59.807 55.000 27.21 5.42 38.32 3.36
1887 1984 0.613777 CCTCCACAGTGGGTAGGAAC 59.386 60.000 20.14 0.00 38.32 3.62
1888 1985 1.348064 CTCCACAGTGGGTAGGAACA 58.652 55.000 20.14 0.00 38.32 3.18
1889 1986 1.909302 CTCCACAGTGGGTAGGAACAT 59.091 52.381 20.14 0.00 38.32 2.71
1890 1987 1.906574 TCCACAGTGGGTAGGAACATC 59.093 52.381 20.14 0.00 38.32 3.06
1891 1988 1.909302 CCACAGTGGGTAGGAACATCT 59.091 52.381 12.40 0.00 32.67 2.90
1892 1989 3.104512 CCACAGTGGGTAGGAACATCTA 58.895 50.000 12.40 0.00 32.67 1.98
1893 1990 3.711704 CCACAGTGGGTAGGAACATCTAT 59.288 47.826 12.40 0.00 32.67 1.98
1894 1991 4.443457 CCACAGTGGGTAGGAACATCTATG 60.443 50.000 12.40 0.00 32.67 2.23
1895 1992 4.162320 CACAGTGGGTAGGAACATCTATGT 59.838 45.833 0.00 0.00 44.20 2.29
1896 1993 5.362717 CACAGTGGGTAGGAACATCTATGTA 59.637 44.000 0.00 0.00 40.80 2.29
1897 1994 5.598830 ACAGTGGGTAGGAACATCTATGTAG 59.401 44.000 0.00 0.00 40.80 2.74
1898 1995 5.598830 CAGTGGGTAGGAACATCTATGTAGT 59.401 44.000 0.00 0.00 40.80 2.73
1899 1996 5.598830 AGTGGGTAGGAACATCTATGTAGTG 59.401 44.000 0.00 0.00 40.80 2.74
1900 1997 5.363005 GTGGGTAGGAACATCTATGTAGTGT 59.637 44.000 0.00 0.00 40.80 3.55
1901 1998 5.597182 TGGGTAGGAACATCTATGTAGTGTC 59.403 44.000 0.00 0.00 40.80 3.67
1902 1999 5.597182 GGGTAGGAACATCTATGTAGTGTCA 59.403 44.000 0.00 0.00 40.80 3.58
1903 2000 6.267928 GGGTAGGAACATCTATGTAGTGTCAT 59.732 42.308 0.00 0.00 40.80 3.06
1904 2001 7.148641 GGTAGGAACATCTATGTAGTGTCATG 58.851 42.308 0.00 0.00 40.80 3.07
1905 2002 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
1906 2003 5.129320 AGGAACATCTATGTAGTGTCATGCA 59.871 40.000 0.00 0.00 40.80 3.96
1907 2004 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
1908 2005 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
1909 2006 5.733676 ACATCTATGTAGTGTCATGCAACA 58.266 37.500 0.00 0.00 39.68 3.33
1910 2007 6.172630 ACATCTATGTAGTGTCATGCAACAA 58.827 36.000 0.00 0.00 39.68 2.83
1911 2008 6.825213 ACATCTATGTAGTGTCATGCAACAAT 59.175 34.615 0.00 0.00 39.68 2.71
1912 2009 6.667007 TCTATGTAGTGTCATGCAACAATG 57.333 37.500 1.88 0.00 0.00 2.82
1913 2010 6.172630 TCTATGTAGTGTCATGCAACAATGT 58.827 36.000 1.88 0.00 0.00 2.71
1914 2011 7.327214 TCTATGTAGTGTCATGCAACAATGTA 58.673 34.615 1.88 0.00 0.00 2.29
1915 2012 7.986889 TCTATGTAGTGTCATGCAACAATGTAT 59.013 33.333 1.88 0.00 31.41 2.29
1916 2013 6.816134 TGTAGTGTCATGCAACAATGTATT 57.184 33.333 1.88 0.00 28.42 1.89
1917 2014 7.213216 TGTAGTGTCATGCAACAATGTATTT 57.787 32.000 1.88 0.00 28.42 1.40
1918 2015 8.329203 TGTAGTGTCATGCAACAATGTATTTA 57.671 30.769 1.88 0.00 28.42 1.40
1919 2016 8.955388 TGTAGTGTCATGCAACAATGTATTTAT 58.045 29.630 1.88 0.00 28.42 1.40
1920 2017 9.787532 GTAGTGTCATGCAACAATGTATTTATT 57.212 29.630 1.88 0.00 28.42 1.40
1923 2020 9.236691 GTGTCATGCAACAATGTATTTATTAGG 57.763 33.333 0.00 0.00 28.42 2.69
1924 2021 8.965819 TGTCATGCAACAATGTATTTATTAGGT 58.034 29.630 0.00 0.00 28.42 3.08
1925 2022 9.801873 GTCATGCAACAATGTATTTATTAGGTT 57.198 29.630 0.00 0.00 28.42 3.50
1945 2042 9.667107 TTAGGTTATAGACTCATTGTTTCTTGG 57.333 33.333 0.00 0.00 0.00 3.61
1946 2043 7.918076 AGGTTATAGACTCATTGTTTCTTGGA 58.082 34.615 0.00 0.00 0.00 3.53
1947 2044 8.043710 AGGTTATAGACTCATTGTTTCTTGGAG 58.956 37.037 0.00 0.00 0.00 3.86
1948 2045 7.824779 GGTTATAGACTCATTGTTTCTTGGAGT 59.175 37.037 0.00 0.00 41.22 3.85
1949 2046 8.660373 GTTATAGACTCATTGTTTCTTGGAGTG 58.340 37.037 0.00 0.00 38.82 3.51
1950 2047 5.041191 AGACTCATTGTTTCTTGGAGTGT 57.959 39.130 0.00 0.00 38.82 3.55
1951 2048 4.818546 AGACTCATTGTTTCTTGGAGTGTG 59.181 41.667 0.00 0.00 38.82 3.82
1952 2049 4.526970 ACTCATTGTTTCTTGGAGTGTGT 58.473 39.130 0.00 0.00 37.43 3.72
1953 2050 4.336433 ACTCATTGTTTCTTGGAGTGTGTG 59.664 41.667 0.00 0.00 37.43 3.82
1954 2051 4.522114 TCATTGTTTCTTGGAGTGTGTGA 58.478 39.130 0.00 0.00 0.00 3.58
1955 2052 5.132502 TCATTGTTTCTTGGAGTGTGTGAT 58.867 37.500 0.00 0.00 0.00 3.06
1956 2053 4.898829 TTGTTTCTTGGAGTGTGTGATG 57.101 40.909 0.00 0.00 0.00 3.07
1957 2054 3.884895 TGTTTCTTGGAGTGTGTGATGT 58.115 40.909 0.00 0.00 0.00 3.06
1958 2055 4.269183 TGTTTCTTGGAGTGTGTGATGTT 58.731 39.130 0.00 0.00 0.00 2.71
1959 2056 4.335315 TGTTTCTTGGAGTGTGTGATGTTC 59.665 41.667 0.00 0.00 0.00 3.18
1960 2057 3.126001 TCTTGGAGTGTGTGATGTTCC 57.874 47.619 0.00 0.00 0.00 3.62
1961 2058 1.800586 CTTGGAGTGTGTGATGTTCCG 59.199 52.381 0.00 0.00 0.00 4.30
1962 2059 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
1963 2060 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
1964 2061 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
1965 2062 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
1966 2063 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
1967 2064 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
1968 2065 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
1969 2066 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
1970 2067 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
1971 2068 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
1972 2069 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
1973 2070 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
1974 2071 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
1975 2072 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
1977 2074 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
1986 2083 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
1987 2084 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
1988 2085 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
1989 2086 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
1990 2087 2.372172 AGCTAGTTACCACAAGCACCTT 59.628 45.455 0.00 0.00 37.44 3.50
1991 2088 3.146847 GCTAGTTACCACAAGCACCTTT 58.853 45.455 0.00 0.00 35.05 3.11
1992 2089 3.188667 GCTAGTTACCACAAGCACCTTTC 59.811 47.826 0.00 0.00 35.05 2.62
1993 2090 3.577805 AGTTACCACAAGCACCTTTCT 57.422 42.857 0.00 0.00 0.00 2.52
1994 2091 3.477530 AGTTACCACAAGCACCTTTCTC 58.522 45.455 0.00 0.00 0.00 2.87
1995 2092 3.136626 AGTTACCACAAGCACCTTTCTCT 59.863 43.478 0.00 0.00 0.00 3.10
1996 2093 2.736670 ACCACAAGCACCTTTCTCTT 57.263 45.000 0.00 0.00 0.00 2.85
1997 2094 2.576615 ACCACAAGCACCTTTCTCTTC 58.423 47.619 0.00 0.00 0.00 2.87
1998 2095 2.092429 ACCACAAGCACCTTTCTCTTCA 60.092 45.455 0.00 0.00 0.00 3.02
1999 2096 3.152341 CCACAAGCACCTTTCTCTTCAT 58.848 45.455 0.00 0.00 0.00 2.57
2000 2097 3.571401 CCACAAGCACCTTTCTCTTCATT 59.429 43.478 0.00 0.00 0.00 2.57
2001 2098 4.761739 CCACAAGCACCTTTCTCTTCATTA 59.238 41.667 0.00 0.00 0.00 1.90
2002 2099 5.241506 CCACAAGCACCTTTCTCTTCATTAA 59.758 40.000 0.00 0.00 0.00 1.40
2003 2100 6.239008 CCACAAGCACCTTTCTCTTCATTAAA 60.239 38.462 0.00 0.00 0.00 1.52
2004 2101 7.373493 CACAAGCACCTTTCTCTTCATTAAAT 58.627 34.615 0.00 0.00 0.00 1.40
2005 2102 8.514594 CACAAGCACCTTTCTCTTCATTAAATA 58.485 33.333 0.00 0.00 0.00 1.40
2006 2103 9.247861 ACAAGCACCTTTCTCTTCATTAAATAT 57.752 29.630 0.00 0.00 0.00 1.28
2032 2129 6.676950 TGACACATAAGCAAAGTTGTATTGG 58.323 36.000 0.00 0.00 0.00 3.16
2033 2130 6.488344 TGACACATAAGCAAAGTTGTATTGGA 59.512 34.615 0.00 0.00 0.00 3.53
2034 2131 6.913170 ACACATAAGCAAAGTTGTATTGGAG 58.087 36.000 0.00 0.00 0.00 3.86
2035 2132 6.490040 ACACATAAGCAAAGTTGTATTGGAGT 59.510 34.615 0.00 0.00 0.00 3.85
2036 2133 6.803320 CACATAAGCAAAGTTGTATTGGAGTG 59.197 38.462 0.00 0.00 0.00 3.51
2037 2134 6.490040 ACATAAGCAAAGTTGTATTGGAGTGT 59.510 34.615 0.00 0.00 0.00 3.55
2038 2135 4.836125 AGCAAAGTTGTATTGGAGTGTG 57.164 40.909 0.00 0.00 0.00 3.82
2039 2136 4.207165 AGCAAAGTTGTATTGGAGTGTGT 58.793 39.130 0.00 0.00 0.00 3.72
2040 2137 4.036734 AGCAAAGTTGTATTGGAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
2041 2138 4.036262 GCAAAGTTGTATTGGAGTGTGTGA 59.964 41.667 0.00 0.00 0.00 3.58
2042 2139 5.278463 GCAAAGTTGTATTGGAGTGTGTGAT 60.278 40.000 0.00 0.00 0.00 3.06
2043 2140 5.947228 AAGTTGTATTGGAGTGTGTGATG 57.053 39.130 0.00 0.00 0.00 3.07
2044 2141 4.973168 AGTTGTATTGGAGTGTGTGATGT 58.027 39.130 0.00 0.00 0.00 3.06
2045 2142 5.376625 AGTTGTATTGGAGTGTGTGATGTT 58.623 37.500 0.00 0.00 0.00 2.71
2046 2143 6.530120 AGTTGTATTGGAGTGTGTGATGTTA 58.470 36.000 0.00 0.00 0.00 2.41
2047 2144 6.426937 AGTTGTATTGGAGTGTGTGATGTTAC 59.573 38.462 0.00 0.00 0.00 2.50
2048 2145 6.109156 TGTATTGGAGTGTGTGATGTTACT 57.891 37.500 0.00 0.00 0.00 2.24
2049 2146 6.163476 TGTATTGGAGTGTGTGATGTTACTC 58.837 40.000 0.00 0.00 38.98 2.59
2055 2152 6.026947 GAGTGTGTGATGTTACTCCTAAGT 57.973 41.667 0.00 0.00 39.66 2.24
2056 2153 6.420913 AGTGTGTGATGTTACTCCTAAGTT 57.579 37.500 0.00 0.00 36.92 2.66
2057 2154 6.456501 AGTGTGTGATGTTACTCCTAAGTTC 58.543 40.000 0.00 0.00 36.92 3.01
2058 2155 5.638234 GTGTGTGATGTTACTCCTAAGTTCC 59.362 44.000 0.00 0.00 36.92 3.62
2059 2156 5.542635 TGTGTGATGTTACTCCTAAGTTCCT 59.457 40.000 0.00 0.00 36.92 3.36
2060 2157 6.100668 GTGTGATGTTACTCCTAAGTTCCTC 58.899 44.000 0.00 0.00 36.92 3.71
2061 2158 5.187186 TGTGATGTTACTCCTAAGTTCCTCC 59.813 44.000 0.00 0.00 36.92 4.30
2062 2159 4.715297 TGATGTTACTCCTAAGTTCCTCCC 59.285 45.833 0.00 0.00 36.92 4.30
2063 2160 3.447950 TGTTACTCCTAAGTTCCTCCCC 58.552 50.000 0.00 0.00 36.92 4.81
2064 2161 3.181404 TGTTACTCCTAAGTTCCTCCCCA 60.181 47.826 0.00 0.00 36.92 4.96
2065 2162 2.972153 ACTCCTAAGTTCCTCCCCAT 57.028 50.000 0.00 0.00 28.74 4.00
2066 2163 3.222394 ACTCCTAAGTTCCTCCCCATT 57.778 47.619 0.00 0.00 28.74 3.16
2067 2164 2.846827 ACTCCTAAGTTCCTCCCCATTG 59.153 50.000 0.00 0.00 28.74 2.82
2068 2165 2.846827 CTCCTAAGTTCCTCCCCATTGT 59.153 50.000 0.00 0.00 0.00 2.71
2069 2166 2.576191 TCCTAAGTTCCTCCCCATTGTG 59.424 50.000 0.00 0.00 0.00 3.33
2070 2167 2.576191 CCTAAGTTCCTCCCCATTGTGA 59.424 50.000 0.00 0.00 0.00 3.58
2071 2168 2.586648 AAGTTCCTCCCCATTGTGAC 57.413 50.000 0.00 0.00 0.00 3.67
2072 2169 0.698818 AGTTCCTCCCCATTGTGACC 59.301 55.000 0.00 0.00 0.00 4.02
2073 2170 0.404040 GTTCCTCCCCATTGTGACCA 59.596 55.000 0.00 0.00 0.00 4.02
2074 2171 1.153539 TTCCTCCCCATTGTGACCAA 58.846 50.000 0.00 0.00 34.45 3.67
2075 2172 0.404040 TCCTCCCCATTGTGACCAAC 59.596 55.000 0.00 0.00 32.26 3.77
2093 2190 9.016438 GTGACCAACCTAATAAATTTGTAGGAA 57.984 33.333 25.42 0.00 38.24 3.36
2139 2239 5.046529 AGTAATGTAGCGCATCTCTTCTTG 58.953 41.667 11.47 0.00 36.67 3.02
2140 2240 3.533606 ATGTAGCGCATCTCTTCTTGT 57.466 42.857 11.47 0.00 30.67 3.16
2141 2241 3.319137 TGTAGCGCATCTCTTCTTGTT 57.681 42.857 11.47 0.00 0.00 2.83
2142 2242 3.664107 TGTAGCGCATCTCTTCTTGTTT 58.336 40.909 11.47 0.00 0.00 2.83
2143 2243 4.065088 TGTAGCGCATCTCTTCTTGTTTT 58.935 39.130 11.47 0.00 0.00 2.43
2144 2244 3.820777 AGCGCATCTCTTCTTGTTTTC 57.179 42.857 11.47 0.00 0.00 2.29
2145 2245 3.406764 AGCGCATCTCTTCTTGTTTTCT 58.593 40.909 11.47 0.00 0.00 2.52
2146 2246 3.817647 AGCGCATCTCTTCTTGTTTTCTT 59.182 39.130 11.47 0.00 0.00 2.52
2175 2275 6.545504 TTTTGACACTGACATCTCTTTAGC 57.454 37.500 0.00 0.00 0.00 3.09
2210 2310 6.688073 AGAGATGGGACTGAGAACTTTTAA 57.312 37.500 0.00 0.00 0.00 1.52
2231 2331 2.821969 AGGGTGCAACATCTCATTTCAC 59.178 45.455 3.06 0.00 39.98 3.18
2283 2383 6.029346 AGCATTTTCATCTGGGTACTTTTG 57.971 37.500 0.00 0.00 0.00 2.44
2286 2386 6.738453 GCATTTTCATCTGGGTACTTTTGTGT 60.738 38.462 0.00 0.00 0.00 3.72
2514 2617 4.021192 CCCTAACAGATGTGGCACAAATTT 60.021 41.667 25.95 16.63 44.16 1.82
2578 2685 4.934075 TTTGCATCAGAGATCGACAAAG 57.066 40.909 0.00 0.00 0.00 2.77
2682 2789 2.029649 AGATGCACATTCACTTTGCCAC 60.030 45.455 0.00 0.00 35.26 5.01
2688 2795 3.931468 CACATTCACTTTGCCACAACAAA 59.069 39.130 0.00 0.00 37.20 2.83
2689 2796 4.571580 CACATTCACTTTGCCACAACAAAT 59.428 37.500 0.00 0.00 38.76 2.32
2691 2798 3.176552 TCACTTTGCCACAACAAATGG 57.823 42.857 0.00 0.00 38.76 3.16
2705 2814 6.097554 CACAACAAATGGCCCTTTATATACCA 59.902 38.462 5.62 0.00 34.28 3.25
2709 2818 7.231467 ACAAATGGCCCTTTATATACCACTAG 58.769 38.462 5.62 0.00 32.13 2.57
2764 2873 6.489675 ACAGATTGCAAGCAAGATAAATACG 58.510 36.000 18.24 0.00 39.47 3.06
2870 3033 6.206829 GGTTGGGTCATATAATAAGCAGGTTC 59.793 42.308 0.00 0.00 0.00 3.62
2871 3034 6.763715 TGGGTCATATAATAAGCAGGTTCT 57.236 37.500 0.00 0.00 0.00 3.01
2883 3046 7.775053 ATAAGCAGGTTCTTTTTACCAATCA 57.225 32.000 0.00 0.00 38.16 2.57
2884 3047 5.712152 AGCAGGTTCTTTTTACCAATCAG 57.288 39.130 0.00 0.00 38.16 2.90
2885 3048 5.140454 AGCAGGTTCTTTTTACCAATCAGT 58.860 37.500 0.00 0.00 38.16 3.41
2886 3049 5.598417 AGCAGGTTCTTTTTACCAATCAGTT 59.402 36.000 0.00 0.00 38.16 3.16
2887 3050 6.098266 AGCAGGTTCTTTTTACCAATCAGTTT 59.902 34.615 0.00 0.00 38.16 2.66
2888 3051 6.200854 GCAGGTTCTTTTTACCAATCAGTTTG 59.799 38.462 0.00 0.00 38.16 2.93
2889 3052 7.264947 CAGGTTCTTTTTACCAATCAGTTTGT 58.735 34.615 0.00 0.00 38.16 2.83
2890 3053 7.435192 CAGGTTCTTTTTACCAATCAGTTTGTC 59.565 37.037 0.00 0.00 38.16 3.18
2891 3054 7.342026 AGGTTCTTTTTACCAATCAGTTTGTCT 59.658 33.333 0.00 0.00 38.16 3.41
2892 3055 8.626526 GGTTCTTTTTACCAATCAGTTTGTCTA 58.373 33.333 0.00 0.00 35.67 2.59
2898 3061 9.959749 TTTTACCAATCAGTTTGTCTAATTCAC 57.040 29.630 0.00 0.00 33.15 3.18
2899 3062 8.684386 TTACCAATCAGTTTGTCTAATTCACA 57.316 30.769 0.00 0.00 33.15 3.58
2900 3063 7.765695 ACCAATCAGTTTGTCTAATTCACAT 57.234 32.000 0.00 0.00 33.15 3.21
2901 3064 7.820648 ACCAATCAGTTTGTCTAATTCACATC 58.179 34.615 0.00 0.00 33.15 3.06
2902 3065 7.667219 ACCAATCAGTTTGTCTAATTCACATCT 59.333 33.333 0.00 0.00 33.15 2.90
2903 3066 9.166173 CCAATCAGTTTGTCTAATTCACATCTA 57.834 33.333 0.00 0.00 33.15 1.98
2904 3067 9.979270 CAATCAGTTTGTCTAATTCACATCTAC 57.021 33.333 0.00 0.00 0.00 2.59
2905 3068 8.723942 ATCAGTTTGTCTAATTCACATCTACC 57.276 34.615 0.00 0.00 0.00 3.18
2906 3069 7.676004 TCAGTTTGTCTAATTCACATCTACCA 58.324 34.615 0.00 0.00 0.00 3.25
2907 3070 8.154203 TCAGTTTGTCTAATTCACATCTACCAA 58.846 33.333 0.00 0.00 0.00 3.67
2958 3121 1.195115 TGAGGAAGGAGATGGTTCCG 58.805 55.000 0.00 0.00 46.01 4.30
3000 3163 0.482446 TTGACAAGCCATTCCACCCT 59.518 50.000 0.00 0.00 0.00 4.34
3029 3192 6.094048 AGGCAATTATCACACACATAACTGAC 59.906 38.462 0.00 0.00 0.00 3.51
3115 3278 2.952978 GTGGGTCACTCGATCTATCACT 59.047 50.000 0.00 0.00 0.00 3.41
3116 3279 4.135306 GTGGGTCACTCGATCTATCACTA 58.865 47.826 0.00 0.00 0.00 2.74
3117 3280 4.214545 GTGGGTCACTCGATCTATCACTAG 59.785 50.000 0.00 0.00 0.00 2.57
3159 3322 6.980593 TGTGGACATTAATCAAGGAACAAAG 58.019 36.000 0.00 0.00 0.00 2.77
3161 3324 5.538053 TGGACATTAATCAAGGAACAAAGCA 59.462 36.000 0.00 0.00 0.00 3.91
3162 3325 6.211184 TGGACATTAATCAAGGAACAAAGCAT 59.789 34.615 0.00 0.00 0.00 3.79
3258 3425 2.861147 ACTTAGAGCCAACAACCCTC 57.139 50.000 0.00 0.00 0.00 4.30
3265 3432 2.267351 CCAACAACCCTCGCATGCA 61.267 57.895 19.57 4.02 0.00 3.96
3267 3434 0.457166 CAACAACCCTCGCATGCATG 60.457 55.000 22.70 22.70 0.00 4.06
3284 3451 3.349488 CATGCATGCCTGTGTAATCAG 57.651 47.619 14.93 0.00 35.45 2.90
3285 3452 1.097232 TGCATGCCTGTGTAATCAGC 58.903 50.000 16.68 0.00 34.47 4.26
3286 3453 1.340308 TGCATGCCTGTGTAATCAGCT 60.340 47.619 16.68 0.00 34.47 4.24
3287 3454 2.093021 TGCATGCCTGTGTAATCAGCTA 60.093 45.455 16.68 0.00 34.47 3.32
3347 3518 1.737199 ACACAAAGTGGGGGCTAGTA 58.263 50.000 1.93 0.00 37.94 1.82
3348 3519 1.628846 ACACAAAGTGGGGGCTAGTAG 59.371 52.381 1.93 0.00 37.94 2.57
3349 3520 1.628846 CACAAAGTGGGGGCTAGTAGT 59.371 52.381 0.00 0.00 0.00 2.73
3350 3521 2.039879 CACAAAGTGGGGGCTAGTAGTT 59.960 50.000 0.00 0.00 0.00 2.24
3351 3522 3.262405 CACAAAGTGGGGGCTAGTAGTTA 59.738 47.826 0.00 0.00 0.00 2.24
3352 3523 3.911894 ACAAAGTGGGGGCTAGTAGTTAA 59.088 43.478 0.00 0.00 0.00 2.01
3353 3524 4.259356 CAAAGTGGGGGCTAGTAGTTAAC 58.741 47.826 0.00 0.00 0.00 2.01
3538 3987 3.849951 ATCGGCGGCGAGTTCCAT 61.850 61.111 36.74 18.42 0.00 3.41
3556 4005 2.283298 CATCGCCACTTCTGCTACAAT 58.717 47.619 0.00 0.00 0.00 2.71
3568 4017 4.841861 TACAATTCCGGCGGCGGG 62.842 66.667 44.30 31.87 0.00 6.13
3623 4075 1.660560 ATCGACCGTACGTGAAGGGG 61.661 60.000 15.21 0.00 34.70 4.79
3624 4076 2.575461 GACCGTACGTGAAGGGGG 59.425 66.667 15.21 0.00 0.00 5.40
3739 4207 0.388659 ATTCAACCGCTTGCTTTGCA 59.611 45.000 0.00 0.00 36.47 4.08
3865 4334 4.656575 AGACTAGGAGGATAAAGAAAGGCC 59.343 45.833 0.00 0.00 0.00 5.19
3867 4336 1.853622 AGGAGGATAAAGAAAGGCCCC 59.146 52.381 0.00 0.00 0.00 5.80
3958 4435 4.989279 ATGATAAAAGCTCCGCATTTGT 57.011 36.364 0.00 0.00 31.91 2.83
3975 4452 2.341318 TGTAACCATGAGTGTCGTCG 57.659 50.000 0.00 0.00 0.00 5.12
3976 4453 0.989890 GTAACCATGAGTGTCGTCGC 59.010 55.000 0.00 0.00 0.00 5.19
3977 4454 0.108992 TAACCATGAGTGTCGTCGCC 60.109 55.000 0.00 0.00 0.00 5.54
4024 4505 2.093973 AGGAGTAGTGAAGAACCATGCG 60.094 50.000 0.00 0.00 0.00 4.73
4087 4572 4.164030 AGAGGCATACATGTACACATCCAA 59.836 41.667 7.96 0.00 33.61 3.53
4177 4662 3.136123 CAACCCAGGCATGCTCGG 61.136 66.667 18.92 17.40 0.00 4.63
4231 4716 2.514824 GGATCGAAGTGGGCTGGC 60.515 66.667 0.00 0.00 0.00 4.85
4270 4755 9.850628 TCGTTTATAGCACCATATATTGTACTC 57.149 33.333 0.00 0.00 0.00 2.59
4271 4756 9.084164 CGTTTATAGCACCATATATTGTACTCC 57.916 37.037 0.00 0.00 0.00 3.85
4272 4757 9.379791 GTTTATAGCACCATATATTGTACTCCC 57.620 37.037 0.00 0.00 0.00 4.30
4273 4758 8.911018 TTATAGCACCATATATTGTACTCCCT 57.089 34.615 0.00 0.00 0.00 4.20
4274 4759 5.746990 AGCACCATATATTGTACTCCCTC 57.253 43.478 0.00 0.00 0.00 4.30
4275 4760 4.532521 AGCACCATATATTGTACTCCCTCC 59.467 45.833 0.00 0.00 0.00 4.30
4276 4761 4.620803 GCACCATATATTGTACTCCCTCCG 60.621 50.000 0.00 0.00 0.00 4.63
4277 4762 4.527038 CACCATATATTGTACTCCCTCCGT 59.473 45.833 0.00 0.00 0.00 4.69
4278 4763 4.771054 ACCATATATTGTACTCCCTCCGTC 59.229 45.833 0.00 0.00 0.00 4.79
4279 4764 4.770531 CCATATATTGTACTCCCTCCGTCA 59.229 45.833 0.00 0.00 0.00 4.35
4280 4765 5.422331 CCATATATTGTACTCCCTCCGTCAT 59.578 44.000 0.00 0.00 0.00 3.06
4281 4766 6.070767 CCATATATTGTACTCCCTCCGTCATT 60.071 42.308 0.00 0.00 0.00 2.57
4282 4767 5.888982 ATATTGTACTCCCTCCGTCATTT 57.111 39.130 0.00 0.00 0.00 2.32
4283 4768 3.328382 TTGTACTCCCTCCGTCATTTG 57.672 47.619 0.00 0.00 0.00 2.32
4284 4769 2.531771 TGTACTCCCTCCGTCATTTGA 58.468 47.619 0.00 0.00 0.00 2.69
4285 4770 2.901192 TGTACTCCCTCCGTCATTTGAA 59.099 45.455 0.00 0.00 0.00 2.69
4286 4771 2.770164 ACTCCCTCCGTCATTTGAAG 57.230 50.000 0.00 0.00 0.00 3.02
4287 4772 2.257207 ACTCCCTCCGTCATTTGAAGA 58.743 47.619 0.00 0.00 0.00 2.87
4288 4773 2.234908 ACTCCCTCCGTCATTTGAAGAG 59.765 50.000 0.00 0.00 0.00 2.85
4289 4774 2.234908 CTCCCTCCGTCATTTGAAGAGT 59.765 50.000 7.64 0.00 0.00 3.24
4290 4775 2.028112 TCCCTCCGTCATTTGAAGAGTG 60.028 50.000 7.64 0.00 0.00 3.51
4291 4776 2.289694 CCCTCCGTCATTTGAAGAGTGT 60.290 50.000 7.64 0.00 0.00 3.55
4292 4777 3.056107 CCCTCCGTCATTTGAAGAGTGTA 60.056 47.826 7.64 0.00 0.00 2.90
4293 4778 3.927142 CCTCCGTCATTTGAAGAGTGTAC 59.073 47.826 7.64 0.00 0.00 2.90
4294 4779 4.322049 CCTCCGTCATTTGAAGAGTGTACT 60.322 45.833 0.00 0.00 0.00 2.73
4295 4780 5.209818 TCCGTCATTTGAAGAGTGTACTT 57.790 39.130 0.00 0.00 0.00 2.24
4296 4781 5.227908 TCCGTCATTTGAAGAGTGTACTTC 58.772 41.667 0.00 0.00 44.31 3.01
4297 4782 4.389077 CCGTCATTTGAAGAGTGTACTTCC 59.611 45.833 0.00 0.00 43.67 3.46
4298 4783 4.988540 CGTCATTTGAAGAGTGTACTTCCA 59.011 41.667 0.00 0.00 43.67 3.53
4299 4784 5.465390 CGTCATTTGAAGAGTGTACTTCCAA 59.535 40.000 0.00 0.00 43.67 3.53
4300 4785 6.564125 CGTCATTTGAAGAGTGTACTTCCAAC 60.564 42.308 0.00 0.00 43.67 3.77
4301 4786 6.483640 GTCATTTGAAGAGTGTACTTCCAACT 59.516 38.462 0.00 0.00 43.67 3.16
4302 4787 7.012421 GTCATTTGAAGAGTGTACTTCCAACTT 59.988 37.037 0.00 0.00 43.67 2.66
4303 4788 7.556275 TCATTTGAAGAGTGTACTTCCAACTTT 59.444 33.333 0.00 0.00 43.67 2.66
4304 4789 6.677781 TTGAAGAGTGTACTTCCAACTTTG 57.322 37.500 0.00 0.00 43.67 2.77
4305 4790 5.741011 TGAAGAGTGTACTTCCAACTTTGT 58.259 37.500 0.00 0.00 43.67 2.83
4306 4791 6.177610 TGAAGAGTGTACTTCCAACTTTGTT 58.822 36.000 0.00 0.00 43.67 2.83
4307 4792 6.093495 TGAAGAGTGTACTTCCAACTTTGTTG 59.907 38.462 0.00 3.69 43.67 3.33
4308 4793 4.881850 AGAGTGTACTTCCAACTTTGTTGG 59.118 41.667 19.97 19.97 40.87 3.77
4309 4794 4.850680 AGTGTACTTCCAACTTTGTTGGA 58.149 39.130 23.38 23.38 46.08 3.53
4317 4802 5.730296 TCCAACTTTGTTGGAAAGTCAAA 57.270 34.783 24.52 4.81 44.90 2.69
4318 4803 5.474825 TCCAACTTTGTTGGAAAGTCAAAC 58.525 37.500 24.52 0.00 44.90 2.93
4319 4804 5.245075 TCCAACTTTGTTGGAAAGTCAAACT 59.755 36.000 24.52 0.00 44.90 2.66
4320 4805 5.931724 CCAACTTTGTTGGAAAGTCAAACTT 59.068 36.000 21.06 0.00 42.06 2.66
4351 4836 9.781834 ATGTTTGACCGTGTTTATACAATAATG 57.218 29.630 0.00 0.00 35.69 1.90
4352 4837 7.751348 TGTTTGACCGTGTTTATACAATAATGC 59.249 33.333 0.00 0.00 35.69 3.56
4353 4838 6.986904 TGACCGTGTTTATACAATAATGCA 57.013 33.333 0.00 0.00 35.69 3.96
4354 4839 6.777101 TGACCGTGTTTATACAATAATGCAC 58.223 36.000 0.00 0.00 35.69 4.57
4355 4840 6.126568 ACCGTGTTTATACAATAATGCACC 57.873 37.500 0.00 0.00 35.69 5.01
4356 4841 5.648526 ACCGTGTTTATACAATAATGCACCA 59.351 36.000 0.00 0.00 35.69 4.17
4357 4842 6.151312 ACCGTGTTTATACAATAATGCACCAA 59.849 34.615 0.00 0.00 35.69 3.67
4358 4843 6.470877 CCGTGTTTATACAATAATGCACCAAC 59.529 38.462 0.00 0.00 35.69 3.77
4359 4844 7.024171 CGTGTTTATACAATAATGCACCAACA 58.976 34.615 0.00 0.00 35.69 3.33
4360 4845 7.700234 CGTGTTTATACAATAATGCACCAACAT 59.300 33.333 0.00 0.00 35.69 2.71
4361 4846 9.364989 GTGTTTATACAATAATGCACCAACATT 57.635 29.630 0.00 0.00 38.71 2.71
4362 4847 9.935241 TGTTTATACAATAATGCACCAACATTT 57.065 25.926 0.00 0.00 40.64 2.32
4366 4851 6.907206 ACAATAATGCACCAACATTTATGC 57.093 33.333 0.00 0.00 40.64 3.14
4367 4852 5.816777 ACAATAATGCACCAACATTTATGCC 59.183 36.000 0.00 0.00 40.64 4.40
4368 4853 3.977134 AATGCACCAACATTTATGCCA 57.023 38.095 0.00 0.00 36.91 4.92
4369 4854 4.490899 AATGCACCAACATTTATGCCAT 57.509 36.364 0.00 0.00 36.91 4.40
4370 4855 3.523606 TGCACCAACATTTATGCCATC 57.476 42.857 0.00 0.00 37.26 3.51
4371 4856 2.168106 TGCACCAACATTTATGCCATCC 59.832 45.455 0.00 0.00 37.26 3.51
4372 4857 2.168106 GCACCAACATTTATGCCATCCA 59.832 45.455 0.00 0.00 31.71 3.41
4373 4858 3.369261 GCACCAACATTTATGCCATCCAA 60.369 43.478 0.00 0.00 31.71 3.53
4374 4859 4.683942 GCACCAACATTTATGCCATCCAAT 60.684 41.667 0.00 0.00 31.71 3.16
4375 4860 5.430007 CACCAACATTTATGCCATCCAATT 58.570 37.500 0.00 0.00 0.00 2.32
4376 4861 6.580788 CACCAACATTTATGCCATCCAATTA 58.419 36.000 0.00 0.00 0.00 1.40
4377 4862 6.702723 CACCAACATTTATGCCATCCAATTAG 59.297 38.462 0.00 0.00 0.00 1.73
4378 4863 6.383726 ACCAACATTTATGCCATCCAATTAGT 59.616 34.615 0.00 0.00 0.00 2.24
4379 4864 7.563188 ACCAACATTTATGCCATCCAATTAGTA 59.437 33.333 0.00 0.00 0.00 1.82
4380 4865 8.084073 CCAACATTTATGCCATCCAATTAGTAG 58.916 37.037 0.00 0.00 0.00 2.57
4381 4866 7.219484 ACATTTATGCCATCCAATTAGTAGC 57.781 36.000 0.00 0.00 0.00 3.58
4382 4867 6.777091 ACATTTATGCCATCCAATTAGTAGCA 59.223 34.615 0.00 0.00 0.00 3.49
4383 4868 7.452501 ACATTTATGCCATCCAATTAGTAGCAT 59.547 33.333 0.00 0.00 41.89 3.79
4384 4869 7.838079 TTTATGCCATCCAATTAGTAGCATT 57.162 32.000 0.00 0.00 39.89 3.56
4385 4870 8.932434 TTTATGCCATCCAATTAGTAGCATTA 57.068 30.769 0.00 0.00 39.89 1.90
4386 4871 8.565896 TTATGCCATCCAATTAGTAGCATTAG 57.434 34.615 0.00 0.00 39.89 1.73
4387 4872 6.186420 TGCCATCCAATTAGTAGCATTAGA 57.814 37.500 0.00 0.00 0.00 2.10
4388 4873 6.782986 TGCCATCCAATTAGTAGCATTAGAT 58.217 36.000 0.00 0.00 0.00 1.98
4389 4874 7.233632 TGCCATCCAATTAGTAGCATTAGATT 58.766 34.615 0.00 0.00 0.00 2.40
4390 4875 7.391554 TGCCATCCAATTAGTAGCATTAGATTC 59.608 37.037 0.00 0.00 0.00 2.52
4391 4876 7.148171 GCCATCCAATTAGTAGCATTAGATTCC 60.148 40.741 0.00 0.00 0.00 3.01
4392 4877 8.105829 CCATCCAATTAGTAGCATTAGATTCCT 58.894 37.037 0.00 0.00 0.00 3.36
4393 4878 8.944029 CATCCAATTAGTAGCATTAGATTCCTG 58.056 37.037 0.00 0.00 0.00 3.86
4394 4879 8.262601 TCCAATTAGTAGCATTAGATTCCTGA 57.737 34.615 0.00 0.00 0.00 3.86
4395 4880 8.884323 TCCAATTAGTAGCATTAGATTCCTGAT 58.116 33.333 0.00 0.00 0.00 2.90
4461 4946 8.633075 ATTGATATATTTTTGCACAAACTCGG 57.367 30.769 0.00 0.00 0.00 4.63
4462 4947 7.151999 TGATATATTTTTGCACAAACTCGGT 57.848 32.000 0.00 0.00 0.00 4.69
4463 4948 7.247728 TGATATATTTTTGCACAAACTCGGTC 58.752 34.615 0.00 0.00 0.00 4.79
4464 4949 3.791973 ATTTTTGCACAAACTCGGTCA 57.208 38.095 0.00 0.00 0.00 4.02
4465 4950 3.577649 TTTTTGCACAAACTCGGTCAA 57.422 38.095 0.00 0.00 0.00 3.18
4466 4951 3.577649 TTTTGCACAAACTCGGTCAAA 57.422 38.095 0.00 0.00 0.00 2.69
4467 4952 2.553079 TTGCACAAACTCGGTCAAAC 57.447 45.000 0.00 0.00 0.00 2.93
4468 4953 0.375454 TGCACAAACTCGGTCAAACG 59.625 50.000 0.00 0.00 0.00 3.60
4469 4954 0.375803 GCACAAACTCGGTCAAACGT 59.624 50.000 0.00 0.00 34.94 3.99
4470 4955 1.202098 GCACAAACTCGGTCAAACGTT 60.202 47.619 0.00 0.00 34.94 3.99
4471 4956 2.436670 CACAAACTCGGTCAAACGTTG 58.563 47.619 0.00 0.00 34.94 4.10
4472 4957 2.094575 CACAAACTCGGTCAAACGTTGA 59.905 45.455 0.00 0.00 37.33 3.18
4473 4958 2.743126 ACAAACTCGGTCAAACGTTGAA 59.257 40.909 0.00 0.00 42.15 2.69
4474 4959 3.188873 ACAAACTCGGTCAAACGTTGAAA 59.811 39.130 0.00 0.00 42.15 2.69
4475 4960 4.142556 ACAAACTCGGTCAAACGTTGAAAT 60.143 37.500 0.00 0.00 42.15 2.17
4476 4961 5.064962 ACAAACTCGGTCAAACGTTGAAATA 59.935 36.000 0.00 0.00 42.15 1.40
4477 4962 4.985044 ACTCGGTCAAACGTTGAAATAG 57.015 40.909 0.00 0.00 42.15 1.73
4478 4963 4.374399 ACTCGGTCAAACGTTGAAATAGT 58.626 39.130 0.00 0.00 42.15 2.12
4479 4964 4.812626 ACTCGGTCAAACGTTGAAATAGTT 59.187 37.500 0.00 0.00 42.15 2.24
4480 4965 5.295045 ACTCGGTCAAACGTTGAAATAGTTT 59.705 36.000 0.00 0.00 42.15 2.66
4487 4972 6.459670 AAACGTTGAAATAGTTTGACCCTT 57.540 33.333 0.00 0.00 36.81 3.95
4488 4973 5.684550 ACGTTGAAATAGTTTGACCCTTC 57.315 39.130 0.00 0.00 0.00 3.46
4489 4974 5.127491 ACGTTGAAATAGTTTGACCCTTCA 58.873 37.500 0.00 0.00 0.00 3.02
4490 4975 5.591067 ACGTTGAAATAGTTTGACCCTTCAA 59.409 36.000 0.00 0.00 40.14 2.69
4491 4976 5.912955 CGTTGAAATAGTTTGACCCTTCAAC 59.087 40.000 13.02 13.02 44.51 3.18
4492 4977 6.459024 CGTTGAAATAGTTTGACCCTTCAACA 60.459 38.462 19.61 0.00 46.60 3.33
4493 4978 7.262048 GTTGAAATAGTTTGACCCTTCAACAA 58.738 34.615 16.52 0.00 46.01 2.83
4494 4979 7.411486 TGAAATAGTTTGACCCTTCAACAAA 57.589 32.000 0.00 0.00 41.64 2.83
4495 4980 7.841956 TGAAATAGTTTGACCCTTCAACAAAA 58.158 30.769 0.00 0.00 41.64 2.44
4496 4981 8.482128 TGAAATAGTTTGACCCTTCAACAAAAT 58.518 29.630 0.00 0.00 41.64 1.82
4497 4982 9.325198 GAAATAGTTTGACCCTTCAACAAAATT 57.675 29.630 0.00 0.00 41.64 1.82
4498 4983 8.661352 AATAGTTTGACCCTTCAACAAAATTG 57.339 30.769 0.00 0.00 41.64 2.32
4499 4984 5.427378 AGTTTGACCCTTCAACAAAATTGG 58.573 37.500 0.00 0.00 41.64 3.16
4500 4985 5.188751 AGTTTGACCCTTCAACAAAATTGGA 59.811 36.000 0.00 0.00 41.64 3.53
4501 4986 5.683876 TTGACCCTTCAACAAAATTGGAA 57.316 34.783 0.00 0.00 36.79 3.53
4502 4987 5.275067 TGACCCTTCAACAAAATTGGAAG 57.725 39.130 0.00 0.00 37.18 3.46
4503 4988 4.714308 TGACCCTTCAACAAAATTGGAAGT 59.286 37.500 9.68 0.00 36.00 3.01
4504 4989 5.894393 TGACCCTTCAACAAAATTGGAAGTA 59.106 36.000 9.68 0.00 36.00 2.24
4505 4990 6.156748 ACCCTTCAACAAAATTGGAAGTAC 57.843 37.500 9.68 0.00 36.00 2.73
4506 4991 5.659079 ACCCTTCAACAAAATTGGAAGTACA 59.341 36.000 0.00 0.00 36.00 2.90
4507 4992 5.983118 CCCTTCAACAAAATTGGAAGTACAC 59.017 40.000 0.00 0.00 36.00 2.90
4508 4993 6.183360 CCCTTCAACAAAATTGGAAGTACACT 60.183 38.462 0.00 0.00 36.00 3.55
4509 4994 6.918022 CCTTCAACAAAATTGGAAGTACACTC 59.082 38.462 0.00 0.00 36.00 3.51
4510 4995 7.201821 CCTTCAACAAAATTGGAAGTACACTCT 60.202 37.037 0.00 0.00 36.00 3.24
4511 4996 7.639113 TCAACAAAATTGGAAGTACACTCTT 57.361 32.000 0.00 0.00 0.00 2.85
4512 4997 8.062065 TCAACAAAATTGGAAGTACACTCTTT 57.938 30.769 0.00 0.00 0.00 2.52
4513 4998 9.179909 TCAACAAAATTGGAAGTACACTCTTTA 57.820 29.630 0.00 0.00 0.00 1.85
4514 4999 9.796120 CAACAAAATTGGAAGTACACTCTTTAA 57.204 29.630 0.00 0.00 0.00 1.52
4517 5002 9.463443 CAAAATTGGAAGTACACTCTTTAAAGG 57.537 33.333 15.13 8.48 0.00 3.11
4518 5003 8.990163 AAATTGGAAGTACACTCTTTAAAGGA 57.010 30.769 15.13 1.82 0.00 3.36
4519 5004 7.981102 ATTGGAAGTACACTCTTTAAAGGAC 57.019 36.000 15.13 6.27 0.00 3.85
4520 5005 5.535333 TGGAAGTACACTCTTTAAAGGACG 58.465 41.667 15.13 6.90 0.00 4.79
4521 5006 4.928020 GGAAGTACACTCTTTAAAGGACGG 59.072 45.833 15.13 5.64 0.00 4.79
4522 5007 5.279156 GGAAGTACACTCTTTAAAGGACGGA 60.279 44.000 15.13 0.00 0.00 4.69
4523 5008 5.388408 AGTACACTCTTTAAAGGACGGAG 57.612 43.478 15.13 7.51 0.00 4.63
4524 5009 5.075493 AGTACACTCTTTAAAGGACGGAGA 58.925 41.667 15.13 0.00 0.00 3.71
4525 5010 4.522722 ACACTCTTTAAAGGACGGAGAG 57.477 45.455 15.13 6.01 39.69 3.20
4526 5011 3.254892 CACTCTTTAAAGGACGGAGAGC 58.745 50.000 15.13 0.00 37.87 4.09
4536 5021 1.331756 GGACGGAGAGCGTATTTCGTA 59.668 52.381 0.00 0.00 42.13 3.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 8.943002 CGTCTTTTAGTTTTAGGTACATCCATT 58.057 33.333 0.00 0.00 39.02 3.16
8 9 8.098912 ACGTCTTTTAGTTTTAGGTACATCCAT 58.901 33.333 0.00 0.00 39.02 3.41
9 10 7.444299 ACGTCTTTTAGTTTTAGGTACATCCA 58.556 34.615 0.00 0.00 39.02 3.41
10 11 7.816513 AGACGTCTTTTAGTTTTAGGTACATCC 59.183 37.037 13.58 0.00 0.00 3.51
11 12 8.754230 AGACGTCTTTTAGTTTTAGGTACATC 57.246 34.615 13.58 0.00 0.00 3.06
12 13 9.852091 CTAGACGTCTTTTAGTTTTAGGTACAT 57.148 33.333 25.44 0.00 0.00 2.29
13 14 9.066892 TCTAGACGTCTTTTAGTTTTAGGTACA 57.933 33.333 25.44 0.00 0.00 2.90
14 15 9.899226 TTCTAGACGTCTTTTAGTTTTAGGTAC 57.101 33.333 25.44 0.00 0.00 3.34
15 16 9.899226 GTTCTAGACGTCTTTTAGTTTTAGGTA 57.101 33.333 25.44 0.00 0.00 3.08
16 17 7.869937 GGTTCTAGACGTCTTTTAGTTTTAGGT 59.130 37.037 25.44 0.00 0.00 3.08
17 18 7.869429 TGGTTCTAGACGTCTTTTAGTTTTAGG 59.131 37.037 25.44 0.00 0.00 2.69
18 19 8.807667 TGGTTCTAGACGTCTTTTAGTTTTAG 57.192 34.615 25.44 11.54 0.00 1.85
19 20 7.383300 GCTGGTTCTAGACGTCTTTTAGTTTTA 59.617 37.037 25.44 0.47 0.00 1.52
20 21 6.202379 GCTGGTTCTAGACGTCTTTTAGTTTT 59.798 38.462 25.44 0.00 0.00 2.43
21 22 5.695363 GCTGGTTCTAGACGTCTTTTAGTTT 59.305 40.000 25.44 0.00 0.00 2.66
22 23 5.010820 AGCTGGTTCTAGACGTCTTTTAGTT 59.989 40.000 25.44 9.05 0.00 2.24
23 24 4.523558 AGCTGGTTCTAGACGTCTTTTAGT 59.476 41.667 25.44 0.00 0.00 2.24
24 25 5.061920 AGCTGGTTCTAGACGTCTTTTAG 57.938 43.478 25.44 15.41 0.00 1.85
25 26 5.392811 GCTAGCTGGTTCTAGACGTCTTTTA 60.393 44.000 25.44 4.66 38.61 1.52
26 27 4.618693 GCTAGCTGGTTCTAGACGTCTTTT 60.619 45.833 25.44 1.49 38.61 2.27
27 28 3.119424 GCTAGCTGGTTCTAGACGTCTTT 60.119 47.826 25.44 2.36 38.61 2.52
28 29 2.424246 GCTAGCTGGTTCTAGACGTCTT 59.576 50.000 25.44 8.09 38.61 3.01
29 30 2.018515 GCTAGCTGGTTCTAGACGTCT 58.981 52.381 23.66 23.66 38.61 4.18
30 31 2.018515 AGCTAGCTGGTTCTAGACGTC 58.981 52.381 18.57 7.70 38.61 4.34
31 32 1.746220 CAGCTAGCTGGTTCTAGACGT 59.254 52.381 33.06 0.00 38.61 4.34
32 33 2.483583 CAGCTAGCTGGTTCTAGACG 57.516 55.000 33.06 6.90 38.61 4.18
71 72 3.043586 CGCTTAGTTAGTCCTACATGCG 58.956 50.000 0.00 0.00 0.00 4.73
92 98 3.194968 TGGTAAGTAGCTGCCAGTAACTC 59.805 47.826 0.00 0.00 0.00 3.01
133 139 5.066117 CACTACTCTGCCTAGTGATCGTTTA 59.934 44.000 0.09 0.00 42.58 2.01
145 151 1.294780 GCACAGCACTACTCTGCCT 59.705 57.895 0.00 0.00 34.47 4.75
146 152 3.882025 GCACAGCACTACTCTGCC 58.118 61.111 0.00 0.00 34.47 4.85
150 156 2.048222 TGCGGCACAGCACTACTC 60.048 61.111 0.00 0.00 42.92 2.59
155 161 3.121030 CTACCTGCGGCACAGCAC 61.121 66.667 0.00 0.00 45.78 4.40
203 220 6.090088 GGCATATTCACGACATTCTAGATGTC 59.910 42.308 18.09 18.09 43.55 3.06
238 255 4.732285 CGTAGCCATGATTGTTATGTCC 57.268 45.455 0.00 0.00 0.00 4.02
310 327 0.104855 TGAGGCTGACACAGTGACAC 59.895 55.000 7.81 0.00 33.43 3.67
311 328 0.829990 TTGAGGCTGACACAGTGACA 59.170 50.000 7.81 6.54 33.43 3.58
312 329 1.506493 CTTGAGGCTGACACAGTGAC 58.494 55.000 7.81 0.92 33.43 3.67
313 330 0.250038 GCTTGAGGCTGACACAGTGA 60.250 55.000 7.81 0.00 38.06 3.41
314 331 1.233285 GGCTTGAGGCTGACACAGTG 61.233 60.000 0.00 0.00 41.46 3.66
315 332 1.072159 GGCTTGAGGCTGACACAGT 59.928 57.895 0.00 0.00 41.46 3.55
316 333 0.954449 CTGGCTTGAGGCTGACACAG 60.954 60.000 6.13 0.00 41.01 3.66
317 334 1.071987 CTGGCTTGAGGCTGACACA 59.928 57.895 6.13 0.00 41.01 3.72
419 436 1.515954 GTCGCAGATTCTTCGGGGA 59.484 57.895 5.90 0.00 40.67 4.81
454 491 2.507484 TGCATGGGACTGAAACTTCTG 58.493 47.619 0.00 0.00 0.00 3.02
632 669 2.819422 GCAGTGTGCATGTATGACTG 57.181 50.000 16.66 16.66 44.26 3.51
692 731 2.238646 TCTAAGCCCACGTCCAAATCAT 59.761 45.455 0.00 0.00 0.00 2.45
764 803 6.079424 GCTTAGCTTAGCTAGATAGTGTGT 57.921 41.667 17.24 0.00 42.34 3.72
834 880 1.902508 CACACCTCCTCTTTCTGGCTA 59.097 52.381 0.00 0.00 0.00 3.93
836 882 0.398318 ACACACCTCCTCTTTCTGGC 59.602 55.000 0.00 0.00 0.00 4.85
837 883 2.498167 CAACACACCTCCTCTTTCTGG 58.502 52.381 0.00 0.00 0.00 3.86
838 884 1.876156 GCAACACACCTCCTCTTTCTG 59.124 52.381 0.00 0.00 0.00 3.02
840 886 0.868406 CGCAACACACCTCCTCTTTC 59.132 55.000 0.00 0.00 0.00 2.62
841 887 1.166531 GCGCAACACACCTCCTCTTT 61.167 55.000 0.30 0.00 0.00 2.52
842 888 1.598130 GCGCAACACACCTCCTCTT 60.598 57.895 0.30 0.00 0.00 2.85
843 889 2.031163 GCGCAACACACCTCCTCT 59.969 61.111 0.30 0.00 0.00 3.69
844 890 1.672356 ATGCGCAACACACCTCCTC 60.672 57.895 17.11 0.00 0.00 3.71
845 891 1.968017 CATGCGCAACACACCTCCT 60.968 57.895 17.11 0.00 0.00 3.69
846 892 2.562912 CATGCGCAACACACCTCC 59.437 61.111 17.11 0.00 0.00 4.30
877 923 5.296151 TGCACCATTTTATAGAGCTAGCT 57.704 39.130 19.45 19.45 0.00 3.32
922 974 1.336240 GCAAGCTGGAACACAATGGTC 60.336 52.381 0.00 0.00 32.07 4.02
1164 1221 5.560567 GCTGCAAATACCAACCAAATGTTTG 60.561 40.000 0.00 0.00 34.00 2.93
1350 1435 6.253746 ACATCTATACAAAGTGACGTACGTC 58.746 40.000 35.46 35.46 44.77 4.34
1492 1587 1.871039 GTGCAAGCCGACAAGTAAAGA 59.129 47.619 0.00 0.00 0.00 2.52
1497 1592 2.113860 ATATGTGCAAGCCGACAAGT 57.886 45.000 0.00 0.00 0.00 3.16
1524 1619 1.096386 TTTTAAGCCGTGTGTGCCGT 61.096 50.000 0.00 0.00 0.00 5.68
1525 1620 0.239879 ATTTTAAGCCGTGTGTGCCG 59.760 50.000 0.00 0.00 0.00 5.69
1527 1622 5.293569 AGAGTATATTTTAAGCCGTGTGTGC 59.706 40.000 0.00 0.00 0.00 4.57
1531 1626 6.097839 TGGAGAGAGTATATTTTAAGCCGTGT 59.902 38.462 0.00 0.00 0.00 4.49
1567 1663 9.381038 ACTAAAGTAGGGATCTAAATGCTCATA 57.619 33.333 0.00 0.00 0.00 2.15
1568 1664 8.153550 CACTAAAGTAGGGATCTAAATGCTCAT 58.846 37.037 0.00 0.00 0.00 2.90
1569 1665 7.344612 TCACTAAAGTAGGGATCTAAATGCTCA 59.655 37.037 0.00 0.00 32.13 4.26
1570 1666 7.727181 TCACTAAAGTAGGGATCTAAATGCTC 58.273 38.462 0.00 0.00 32.13 4.26
1571 1667 7.676683 TCACTAAAGTAGGGATCTAAATGCT 57.323 36.000 0.00 0.00 32.13 3.79
1581 1677 9.710818 AGTGTTTATAGATCACTAAAGTAGGGA 57.289 33.333 0.00 0.00 43.46 4.20
1582 1678 9.968870 GAGTGTTTATAGATCACTAAAGTAGGG 57.031 37.037 0.00 0.00 41.58 3.53
1800 1897 1.755179 CCCATTGTGACCAGCCTTAG 58.245 55.000 0.00 0.00 0.00 2.18
1804 1901 1.880819 CTTGCCCATTGTGACCAGCC 61.881 60.000 0.00 0.00 0.00 4.85
1805 1902 0.895100 TCTTGCCCATTGTGACCAGC 60.895 55.000 0.00 0.00 0.00 4.85
1806 1903 1.270550 GTTCTTGCCCATTGTGACCAG 59.729 52.381 0.00 0.00 0.00 4.00
1809 1906 3.758554 ACTATGTTCTTGCCCATTGTGAC 59.241 43.478 0.00 0.00 0.00 3.67
1810 1907 4.009675 GACTATGTTCTTGCCCATTGTGA 58.990 43.478 0.00 0.00 29.34 3.58
1811 1908 4.012374 AGACTATGTTCTTGCCCATTGTG 58.988 43.478 0.00 0.00 29.34 3.33
1812 1909 4.307032 AGACTATGTTCTTGCCCATTGT 57.693 40.909 0.00 0.00 31.33 2.71
1813 1910 5.431765 ACTAGACTATGTTCTTGCCCATTG 58.568 41.667 0.00 0.00 0.00 2.82
1814 1911 5.700402 ACTAGACTATGTTCTTGCCCATT 57.300 39.130 0.00 0.00 0.00 3.16
1815 1912 6.384305 AGTTACTAGACTATGTTCTTGCCCAT 59.616 38.462 0.00 0.00 0.00 4.00
1816 1913 5.720041 AGTTACTAGACTATGTTCTTGCCCA 59.280 40.000 0.00 0.00 0.00 5.36
1817 1914 6.223351 AGTTACTAGACTATGTTCTTGCCC 57.777 41.667 0.00 0.00 0.00 5.36
1818 1915 8.248945 TGTAAGTTACTAGACTATGTTCTTGCC 58.751 37.037 14.00 0.00 0.00 4.52
1819 1916 9.074443 GTGTAAGTTACTAGACTATGTTCTTGC 57.926 37.037 14.00 0.00 0.00 4.01
1822 1919 9.517868 AGTGTGTAAGTTACTAGACTATGTTCT 57.482 33.333 14.00 0.00 0.00 3.01
1826 1923 9.570488 GGAAAGTGTGTAAGTTACTAGACTATG 57.430 37.037 14.00 0.00 0.00 2.23
1827 1924 9.531158 AGGAAAGTGTGTAAGTTACTAGACTAT 57.469 33.333 14.00 4.20 0.00 2.12
1828 1925 8.930846 AGGAAAGTGTGTAAGTTACTAGACTA 57.069 34.615 14.00 0.00 0.00 2.59
1829 1926 7.836479 AGGAAAGTGTGTAAGTTACTAGACT 57.164 36.000 14.00 10.77 0.00 3.24
1830 1927 9.007901 TCTAGGAAAGTGTGTAAGTTACTAGAC 57.992 37.037 14.00 8.96 35.31 2.59
1831 1928 9.007901 GTCTAGGAAAGTGTGTAAGTTACTAGA 57.992 37.037 14.00 6.66 36.52 2.43
1832 1929 9.012161 AGTCTAGGAAAGTGTGTAAGTTACTAG 57.988 37.037 14.00 4.64 33.89 2.57
1833 1930 8.930846 AGTCTAGGAAAGTGTGTAAGTTACTA 57.069 34.615 14.00 1.06 0.00 1.82
1834 1931 7.836479 AGTCTAGGAAAGTGTGTAAGTTACT 57.164 36.000 14.00 0.00 0.00 2.24
1835 1932 9.570488 CATAGTCTAGGAAAGTGTGTAAGTTAC 57.430 37.037 6.06 6.06 0.00 2.50
1836 1933 9.305555 ACATAGTCTAGGAAAGTGTGTAAGTTA 57.694 33.333 0.00 0.00 0.00 2.24
1837 1934 8.191534 ACATAGTCTAGGAAAGTGTGTAAGTT 57.808 34.615 0.00 0.00 0.00 2.66
1838 1935 7.778185 ACATAGTCTAGGAAAGTGTGTAAGT 57.222 36.000 0.00 0.00 0.00 2.24
1839 1936 9.570488 GTAACATAGTCTAGGAAAGTGTGTAAG 57.430 37.037 0.00 0.00 0.00 2.34
1840 1937 9.305555 AGTAACATAGTCTAGGAAAGTGTGTAA 57.694 33.333 0.00 0.00 0.00 2.41
1841 1938 8.874744 AGTAACATAGTCTAGGAAAGTGTGTA 57.125 34.615 0.00 0.00 0.00 2.90
1842 1939 7.778185 AGTAACATAGTCTAGGAAAGTGTGT 57.222 36.000 0.00 0.00 0.00 3.72
1843 1940 8.189460 GGTAGTAACATAGTCTAGGAAAGTGTG 58.811 40.741 0.00 0.00 0.00 3.82
1844 1941 8.114743 AGGTAGTAACATAGTCTAGGAAAGTGT 58.885 37.037 0.00 0.00 0.00 3.55
1845 1942 8.522542 AGGTAGTAACATAGTCTAGGAAAGTG 57.477 38.462 0.00 0.00 0.00 3.16
1846 1943 7.779326 GGAGGTAGTAACATAGTCTAGGAAAGT 59.221 40.741 0.00 0.00 0.00 2.66
1847 1944 7.778853 TGGAGGTAGTAACATAGTCTAGGAAAG 59.221 40.741 0.00 0.00 0.00 2.62
1848 1945 7.559170 GTGGAGGTAGTAACATAGTCTAGGAAA 59.441 40.741 0.00 0.00 0.00 3.13
1849 1946 7.059156 GTGGAGGTAGTAACATAGTCTAGGAA 58.941 42.308 0.00 0.00 0.00 3.36
1850 1947 6.159222 TGTGGAGGTAGTAACATAGTCTAGGA 59.841 42.308 0.00 0.00 0.00 2.94
1851 1948 6.363065 TGTGGAGGTAGTAACATAGTCTAGG 58.637 44.000 0.00 0.00 0.00 3.02
1852 1949 7.012515 CACTGTGGAGGTAGTAACATAGTCTAG 59.987 44.444 0.00 0.00 33.84 2.43
1853 1950 6.827251 CACTGTGGAGGTAGTAACATAGTCTA 59.173 42.308 0.00 0.00 33.84 2.59
1854 1951 5.652891 CACTGTGGAGGTAGTAACATAGTCT 59.347 44.000 0.00 0.00 33.84 3.24
1855 1952 5.163540 CCACTGTGGAGGTAGTAACATAGTC 60.164 48.000 22.33 0.00 40.96 2.59
1856 1953 4.710375 CCACTGTGGAGGTAGTAACATAGT 59.290 45.833 22.33 0.00 40.96 2.12
1857 1954 4.099573 CCCACTGTGGAGGTAGTAACATAG 59.900 50.000 27.94 2.06 40.96 2.23
1858 1955 4.028131 CCCACTGTGGAGGTAGTAACATA 58.972 47.826 27.94 0.00 40.96 2.29
1859 1956 2.838202 CCCACTGTGGAGGTAGTAACAT 59.162 50.000 27.94 0.00 40.96 2.71
1860 1957 2.253610 CCCACTGTGGAGGTAGTAACA 58.746 52.381 27.94 0.00 40.96 2.41
1861 1958 2.254508 ACCCACTGTGGAGGTAGTAAC 58.745 52.381 27.94 0.00 40.96 2.50
1862 1959 2.708037 ACCCACTGTGGAGGTAGTAA 57.292 50.000 27.94 0.00 40.96 2.24
1863 1960 3.377253 CTACCCACTGTGGAGGTAGTA 57.623 52.381 27.94 18.08 45.39 1.82
1864 1961 2.233305 CTACCCACTGTGGAGGTAGT 57.767 55.000 27.94 17.93 45.39 2.73
1866 1963 1.086565 TCCTACCCACTGTGGAGGTA 58.913 55.000 27.94 19.39 40.96 3.08
1867 1964 0.192566 TTCCTACCCACTGTGGAGGT 59.807 55.000 27.94 19.31 40.96 3.85
1868 1965 0.613777 GTTCCTACCCACTGTGGAGG 59.386 60.000 27.94 24.85 40.96 4.30
1869 1966 1.348064 TGTTCCTACCCACTGTGGAG 58.652 55.000 27.94 19.03 40.96 3.86
1870 1967 1.906574 GATGTTCCTACCCACTGTGGA 59.093 52.381 27.94 8.24 40.96 4.02
1871 1968 1.909302 AGATGTTCCTACCCACTGTGG 59.091 52.381 20.01 20.01 37.25 4.17
1872 1969 4.162320 ACATAGATGTTCCTACCCACTGTG 59.838 45.833 0.00 0.00 37.90 3.66
1873 1970 4.362677 ACATAGATGTTCCTACCCACTGT 58.637 43.478 0.00 0.00 37.90 3.55
1874 1971 5.598830 ACTACATAGATGTTCCTACCCACTG 59.401 44.000 0.00 0.00 41.97 3.66
1875 1972 5.598830 CACTACATAGATGTTCCTACCCACT 59.401 44.000 0.00 0.00 41.97 4.00
1876 1973 5.363005 ACACTACATAGATGTTCCTACCCAC 59.637 44.000 0.00 0.00 41.97 4.61
1877 1974 5.525484 ACACTACATAGATGTTCCTACCCA 58.475 41.667 0.00 0.00 41.97 4.51
1878 1975 5.597182 TGACACTACATAGATGTTCCTACCC 59.403 44.000 0.00 0.00 41.97 3.69
1879 1976 6.710597 TGACACTACATAGATGTTCCTACC 57.289 41.667 0.00 0.00 41.97 3.18
1880 1977 6.642950 GCATGACACTACATAGATGTTCCTAC 59.357 42.308 0.00 0.00 41.97 3.18
1881 1978 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
1882 1979 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
1883 1980 5.359756 TGCATGACACTACATAGATGTTCC 58.640 41.667 0.00 0.00 41.97 3.62
1884 1981 6.313658 TGTTGCATGACACTACATAGATGTTC 59.686 38.462 0.00 0.00 41.97 3.18
1885 1982 6.172630 TGTTGCATGACACTACATAGATGTT 58.827 36.000 0.00 0.00 41.97 2.71
1886 1983 5.733676 TGTTGCATGACACTACATAGATGT 58.266 37.500 0.00 0.08 44.48 3.06
1887 1984 6.667007 TTGTTGCATGACACTACATAGATG 57.333 37.500 0.00 0.00 0.00 2.90
1888 1985 6.825213 ACATTGTTGCATGACACTACATAGAT 59.175 34.615 0.00 0.00 0.00 1.98
1889 1986 6.172630 ACATTGTTGCATGACACTACATAGA 58.827 36.000 0.00 0.00 0.00 1.98
1890 1987 6.426980 ACATTGTTGCATGACACTACATAG 57.573 37.500 0.00 0.00 0.00 2.23
1891 1988 8.504812 AATACATTGTTGCATGACACTACATA 57.495 30.769 0.00 0.00 0.00 2.29
1892 1989 7.395190 AATACATTGTTGCATGACACTACAT 57.605 32.000 0.00 0.00 0.00 2.29
1893 1990 6.816134 AATACATTGTTGCATGACACTACA 57.184 33.333 0.00 0.00 0.00 2.74
1894 1991 9.787532 AATAAATACATTGTTGCATGACACTAC 57.212 29.630 0.00 0.00 0.00 2.73
1897 1994 9.236691 CCTAATAAATACATTGTTGCATGACAC 57.763 33.333 0.00 0.00 0.00 3.67
1898 1995 8.965819 ACCTAATAAATACATTGTTGCATGACA 58.034 29.630 0.00 0.00 0.00 3.58
1899 1996 9.801873 AACCTAATAAATACATTGTTGCATGAC 57.198 29.630 0.00 0.00 0.00 3.06
1919 2016 9.667107 CCAAGAAACAATGAGTCTATAACCTAA 57.333 33.333 0.00 0.00 0.00 2.69
1920 2017 9.042450 TCCAAGAAACAATGAGTCTATAACCTA 57.958 33.333 0.00 0.00 0.00 3.08
1921 2018 7.918076 TCCAAGAAACAATGAGTCTATAACCT 58.082 34.615 0.00 0.00 0.00 3.50
1922 2019 7.824779 ACTCCAAGAAACAATGAGTCTATAACC 59.175 37.037 0.00 0.00 30.81 2.85
1923 2020 8.660373 CACTCCAAGAAACAATGAGTCTATAAC 58.340 37.037 0.00 0.00 34.21 1.89
1924 2021 8.375506 ACACTCCAAGAAACAATGAGTCTATAA 58.624 33.333 0.00 0.00 34.21 0.98
1925 2022 7.819415 CACACTCCAAGAAACAATGAGTCTATA 59.181 37.037 0.00 0.00 34.21 1.31
1926 2023 6.652481 CACACTCCAAGAAACAATGAGTCTAT 59.348 38.462 0.00 0.00 34.21 1.98
1927 2024 5.991606 CACACTCCAAGAAACAATGAGTCTA 59.008 40.000 0.00 0.00 34.21 2.59
1928 2025 4.818546 CACACTCCAAGAAACAATGAGTCT 59.181 41.667 0.00 0.00 34.21 3.24
1929 2026 4.576463 ACACACTCCAAGAAACAATGAGTC 59.424 41.667 0.00 0.00 34.21 3.36
1930 2027 4.336433 CACACACTCCAAGAAACAATGAGT 59.664 41.667 0.00 0.00 36.77 3.41
1931 2028 4.576053 TCACACACTCCAAGAAACAATGAG 59.424 41.667 0.00 0.00 0.00 2.90
1932 2029 4.522114 TCACACACTCCAAGAAACAATGA 58.478 39.130 0.00 0.00 0.00 2.57
1933 2030 4.898829 TCACACACTCCAAGAAACAATG 57.101 40.909 0.00 0.00 0.00 2.82
1934 2031 4.889409 ACATCACACACTCCAAGAAACAAT 59.111 37.500 0.00 0.00 0.00 2.71
1935 2032 4.269183 ACATCACACACTCCAAGAAACAA 58.731 39.130 0.00 0.00 0.00 2.83
1936 2033 3.884895 ACATCACACACTCCAAGAAACA 58.115 40.909 0.00 0.00 0.00 2.83
1937 2034 4.261197 GGAACATCACACACTCCAAGAAAC 60.261 45.833 0.00 0.00 0.00 2.78
1938 2035 3.882888 GGAACATCACACACTCCAAGAAA 59.117 43.478 0.00 0.00 0.00 2.52
1939 2036 3.476552 GGAACATCACACACTCCAAGAA 58.523 45.455 0.00 0.00 0.00 2.52
1940 2037 2.547855 CGGAACATCACACACTCCAAGA 60.548 50.000 0.00 0.00 0.00 3.02
1941 2038 1.800586 CGGAACATCACACACTCCAAG 59.199 52.381 0.00 0.00 0.00 3.61
1942 2039 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
1943 2040 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
1944 2041 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
1945 2042 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
1946 2043 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
1947 2044 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
1948 2045 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
1949 2046 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
1950 2047 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
1951 2048 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
1952 2049 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
1953 2050 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
1954 2051 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
1971 2068 4.642429 AGAAAGGTGCTTGTGGTAACTAG 58.358 43.478 0.00 0.00 37.61 2.57
1972 2069 4.347000 AGAGAAAGGTGCTTGTGGTAACTA 59.653 41.667 0.00 0.00 37.61 2.24
1973 2070 3.136626 AGAGAAAGGTGCTTGTGGTAACT 59.863 43.478 0.00 0.00 37.61 2.24
1974 2071 3.477530 AGAGAAAGGTGCTTGTGGTAAC 58.522 45.455 0.00 0.00 0.00 2.50
1975 2072 3.857157 AGAGAAAGGTGCTTGTGGTAA 57.143 42.857 0.00 0.00 0.00 2.85
1976 2073 3.135712 TGAAGAGAAAGGTGCTTGTGGTA 59.864 43.478 0.00 0.00 0.00 3.25
1977 2074 2.092429 TGAAGAGAAAGGTGCTTGTGGT 60.092 45.455 0.00 0.00 0.00 4.16
1978 2075 2.575532 TGAAGAGAAAGGTGCTTGTGG 58.424 47.619 0.00 0.00 0.00 4.17
1979 2076 4.843220 AATGAAGAGAAAGGTGCTTGTG 57.157 40.909 0.00 0.00 0.00 3.33
1980 2077 6.959639 TTTAATGAAGAGAAAGGTGCTTGT 57.040 33.333 0.00 0.00 0.00 3.16
2006 2103 8.458052 CCAATACAACTTTGCTTATGTGTCATA 58.542 33.333 0.00 0.00 0.00 2.15
2007 2104 7.176515 TCCAATACAACTTTGCTTATGTGTCAT 59.823 33.333 0.00 0.00 0.00 3.06
2008 2105 6.488344 TCCAATACAACTTTGCTTATGTGTCA 59.512 34.615 0.00 0.00 0.00 3.58
2009 2106 6.908825 TCCAATACAACTTTGCTTATGTGTC 58.091 36.000 0.00 0.00 0.00 3.67
2010 2107 6.490040 ACTCCAATACAACTTTGCTTATGTGT 59.510 34.615 0.00 0.00 0.00 3.72
2011 2108 6.803320 CACTCCAATACAACTTTGCTTATGTG 59.197 38.462 0.00 0.00 0.00 3.21
2012 2109 6.490040 ACACTCCAATACAACTTTGCTTATGT 59.510 34.615 0.00 0.00 0.00 2.29
2013 2110 6.803320 CACACTCCAATACAACTTTGCTTATG 59.197 38.462 0.00 0.00 0.00 1.90
2014 2111 6.490040 ACACACTCCAATACAACTTTGCTTAT 59.510 34.615 0.00 0.00 0.00 1.73
2015 2112 5.825679 ACACACTCCAATACAACTTTGCTTA 59.174 36.000 0.00 0.00 0.00 3.09
2016 2113 4.644685 ACACACTCCAATACAACTTTGCTT 59.355 37.500 0.00 0.00 0.00 3.91
2017 2114 4.036734 CACACACTCCAATACAACTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
2018 2115 4.036262 TCACACACTCCAATACAACTTTGC 59.964 41.667 0.00 0.00 0.00 3.68
2019 2116 5.749596 TCACACACTCCAATACAACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
2020 2117 5.827797 ACATCACACACTCCAATACAACTTT 59.172 36.000 0.00 0.00 0.00 2.66
2021 2118 5.376625 ACATCACACACTCCAATACAACTT 58.623 37.500 0.00 0.00 0.00 2.66
2022 2119 4.973168 ACATCACACACTCCAATACAACT 58.027 39.130 0.00 0.00 0.00 3.16
2023 2120 5.689383 AACATCACACACTCCAATACAAC 57.311 39.130 0.00 0.00 0.00 3.32
2024 2121 6.530120 AGTAACATCACACACTCCAATACAA 58.470 36.000 0.00 0.00 0.00 2.41
2025 2122 6.109156 AGTAACATCACACACTCCAATACA 57.891 37.500 0.00 0.00 0.00 2.29
2026 2123 6.648725 GAGTAACATCACACACTCCAATAC 57.351 41.667 0.00 0.00 32.93 1.89
2032 2129 6.026947 ACTTAGGAGTAACATCACACACTC 57.973 41.667 0.00 0.00 37.32 3.51
2033 2130 6.420913 AACTTAGGAGTAACATCACACACT 57.579 37.500 0.00 0.00 34.21 3.55
2034 2131 5.638234 GGAACTTAGGAGTAACATCACACAC 59.362 44.000 0.00 0.00 34.21 3.82
2035 2132 5.542635 AGGAACTTAGGAGTAACATCACACA 59.457 40.000 0.00 0.00 34.21 3.72
2036 2133 6.038997 AGGAACTTAGGAGTAACATCACAC 57.961 41.667 0.00 0.00 34.21 3.82
2037 2134 5.187186 GGAGGAACTTAGGAGTAACATCACA 59.813 44.000 0.00 0.00 41.55 3.58
2038 2135 5.395435 GGGAGGAACTTAGGAGTAACATCAC 60.395 48.000 0.00 0.00 41.55 3.06
2039 2136 4.715297 GGGAGGAACTTAGGAGTAACATCA 59.285 45.833 0.00 0.00 41.55 3.07
2040 2137 4.101274 GGGGAGGAACTTAGGAGTAACATC 59.899 50.000 0.00 0.00 41.55 3.06
2041 2138 4.038633 GGGGAGGAACTTAGGAGTAACAT 58.961 47.826 0.00 0.00 41.55 2.71
2042 2139 3.181404 TGGGGAGGAACTTAGGAGTAACA 60.181 47.826 0.00 0.00 41.55 2.41
2043 2140 3.447950 TGGGGAGGAACTTAGGAGTAAC 58.552 50.000 0.00 0.00 41.55 2.50
2044 2141 3.858696 TGGGGAGGAACTTAGGAGTAA 57.141 47.619 0.00 0.00 41.55 2.24
2045 2142 4.037927 CAATGGGGAGGAACTTAGGAGTA 58.962 47.826 0.00 0.00 41.55 2.59
2046 2143 2.846827 CAATGGGGAGGAACTTAGGAGT 59.153 50.000 0.00 0.00 41.55 3.85
2047 2144 2.846827 ACAATGGGGAGGAACTTAGGAG 59.153 50.000 0.00 0.00 41.55 3.69
2048 2145 2.576191 CACAATGGGGAGGAACTTAGGA 59.424 50.000 0.00 0.00 41.55 2.94
2049 2146 2.576191 TCACAATGGGGAGGAACTTAGG 59.424 50.000 0.00 0.00 41.55 2.69
2050 2147 3.610911 GTCACAATGGGGAGGAACTTAG 58.389 50.000 0.00 0.00 41.55 2.18
2051 2148 2.307686 GGTCACAATGGGGAGGAACTTA 59.692 50.000 0.00 0.00 41.55 2.24
2052 2149 1.075536 GGTCACAATGGGGAGGAACTT 59.924 52.381 0.00 0.00 41.55 2.66
2053 2150 5.657619 GTTGGTCACAATGGGGAGGAACT 62.658 52.174 0.00 0.00 39.80 3.01
2054 2151 0.404040 TGGTCACAATGGGGAGGAAC 59.596 55.000 0.00 0.00 0.00 3.62
2055 2152 1.153539 TTGGTCACAATGGGGAGGAA 58.846 50.000 0.00 0.00 0.00 3.36
2056 2153 0.404040 GTTGGTCACAATGGGGAGGA 59.596 55.000 0.00 0.00 39.13 3.71
2057 2154 0.611896 GGTTGGTCACAATGGGGAGG 60.612 60.000 0.00 0.00 39.13 4.30
2058 2155 0.405585 AGGTTGGTCACAATGGGGAG 59.594 55.000 0.00 0.00 39.13 4.30
2059 2156 1.748732 TAGGTTGGTCACAATGGGGA 58.251 50.000 0.00 0.00 39.13 4.81
2060 2157 2.595750 TTAGGTTGGTCACAATGGGG 57.404 50.000 0.00 0.00 39.13 4.96
2061 2158 6.790232 ATTTATTAGGTTGGTCACAATGGG 57.210 37.500 0.00 0.00 39.13 4.00
2062 2159 8.093927 ACAAATTTATTAGGTTGGTCACAATGG 58.906 33.333 0.00 0.00 39.13 3.16
2065 2162 8.798402 CCTACAAATTTATTAGGTTGGTCACAA 58.202 33.333 13.57 0.00 0.00 3.33
2066 2163 8.164733 TCCTACAAATTTATTAGGTTGGTCACA 58.835 33.333 18.30 1.97 34.93 3.58
2067 2164 8.570068 TCCTACAAATTTATTAGGTTGGTCAC 57.430 34.615 18.30 0.00 34.93 3.67
2068 2165 9.762381 ATTCCTACAAATTTATTAGGTTGGTCA 57.238 29.630 18.30 4.95 34.93 4.02
2070 2167 8.977412 CCATTCCTACAAATTTATTAGGTTGGT 58.023 33.333 22.65 8.37 35.20 3.67
2071 2168 7.926018 GCCATTCCTACAAATTTATTAGGTTGG 59.074 37.037 24.32 24.32 38.74 3.77
2072 2169 7.647715 CGCCATTCCTACAAATTTATTAGGTTG 59.352 37.037 18.30 16.54 34.93 3.77
2073 2170 7.340999 ACGCCATTCCTACAAATTTATTAGGTT 59.659 33.333 18.30 9.46 34.93 3.50
2074 2171 6.831868 ACGCCATTCCTACAAATTTATTAGGT 59.168 34.615 18.30 4.68 34.93 3.08
2075 2172 7.138736 CACGCCATTCCTACAAATTTATTAGG 58.861 38.462 14.92 14.92 34.69 2.69
2093 2190 2.777972 GCATGGATGTGCACGCCAT 61.778 57.895 28.55 28.55 44.43 4.40
2160 2260 6.336566 AGTGTACATGCTAAAGAGATGTCAG 58.663 40.000 0.00 0.00 32.59 3.51
2175 2275 6.045318 CAGTCCCATCTCTTTAGTGTACATG 58.955 44.000 0.00 0.00 0.00 3.21
2210 2310 2.821969 GTGAAATGAGATGTTGCACCCT 59.178 45.455 0.00 0.00 0.00 4.34
2231 2331 3.133183 GGGAAAGACTCTAGCTGGTTAGG 59.867 52.174 0.00 0.00 0.00 2.69
2481 2581 8.275758 TGCCACATCTGTTAGGGTTAATTAATA 58.724 33.333 0.31 0.00 0.00 0.98
2514 2617 2.090760 ACTTGTGTGCATGTTGTCACA 58.909 42.857 1.75 1.75 40.50 3.58
2528 2631 2.426738 TGAAACTTTCAGGGCACTTGTG 59.573 45.455 0.00 0.00 34.08 3.33
2536 2639 7.603404 TGCAAAATTCATATGAAACTTTCAGGG 59.397 33.333 21.50 12.30 43.98 4.45
2578 2685 3.117171 CTCAGTGGCTGCTCGTGC 61.117 66.667 1.71 1.71 40.20 5.34
2682 2789 6.323739 AGTGGTATATAAAGGGCCATTTGTTG 59.676 38.462 25.06 0.00 0.00 3.33
2688 2795 7.073215 TCAAACTAGTGGTATATAAAGGGCCAT 59.927 37.037 6.18 0.00 0.00 4.40
2689 2796 6.387513 TCAAACTAGTGGTATATAAAGGGCCA 59.612 38.462 6.18 0.00 0.00 5.36
2691 2798 7.732996 TCTCAAACTAGTGGTATATAAAGGGC 58.267 38.462 0.00 0.00 0.00 5.19
2709 2818 9.997482 TTGTCACAACTTATTAGTTTCTCAAAC 57.003 29.630 0.00 0.00 41.85 2.93
2727 2836 5.826601 TGCAATCTGTAAGTTTGTCACAA 57.173 34.783 0.00 0.00 43.73 3.33
2733 2842 5.522456 TCTTGCTTGCAATCTGTAAGTTTG 58.478 37.500 8.55 0.00 44.45 2.93
2764 2873 6.205658 CCTCAAATCTCCGAATAATTTCCTCC 59.794 42.308 0.00 0.00 0.00 4.30
2881 3044 7.676004 TGGTAGATGTGAATTAGACAAACTGA 58.324 34.615 0.00 0.00 0.00 3.41
2882 3045 7.905604 TGGTAGATGTGAATTAGACAAACTG 57.094 36.000 0.00 0.00 0.00 3.16
2885 3048 9.613428 CCTATTGGTAGATGTGAATTAGACAAA 57.387 33.333 0.00 0.00 0.00 2.83
2886 3049 8.768397 ACCTATTGGTAGATGTGAATTAGACAA 58.232 33.333 0.00 0.00 46.43 3.18
2887 3050 8.204160 CACCTATTGGTAGATGTGAATTAGACA 58.796 37.037 0.00 0.00 46.60 3.41
2888 3051 8.421784 TCACCTATTGGTAGATGTGAATTAGAC 58.578 37.037 0.00 0.00 46.60 2.59
2889 3052 8.547481 TCACCTATTGGTAGATGTGAATTAGA 57.453 34.615 0.00 0.00 46.60 2.10
2890 3053 9.212641 CATCACCTATTGGTAGATGTGAATTAG 57.787 37.037 20.11 0.19 46.60 1.73
2891 3054 8.156820 CCATCACCTATTGGTAGATGTGAATTA 58.843 37.037 23.28 0.00 46.60 1.40
2892 3055 7.000472 CCATCACCTATTGGTAGATGTGAATT 59.000 38.462 23.28 0.00 46.60 2.17
2893 3056 6.329986 TCCATCACCTATTGGTAGATGTGAAT 59.670 38.462 23.28 0.00 46.60 2.57
2894 3057 5.665360 TCCATCACCTATTGGTAGATGTGAA 59.335 40.000 23.28 13.68 46.60 3.18
2895 3058 5.215845 TCCATCACCTATTGGTAGATGTGA 58.784 41.667 23.28 19.37 46.60 3.58
2896 3059 5.512060 CCTCCATCACCTATTGGTAGATGTG 60.512 48.000 23.28 18.25 46.60 3.21
2897 3060 4.594920 CCTCCATCACCTATTGGTAGATGT 59.405 45.833 23.28 3.64 46.60 3.06
2898 3061 4.840680 TCCTCCATCACCTATTGGTAGATG 59.159 45.833 20.81 20.81 46.60 2.90
2899 3062 5.090139 CTCCTCCATCACCTATTGGTAGAT 58.910 45.833 0.00 2.38 46.60 1.98
2900 3063 4.483950 CTCCTCCATCACCTATTGGTAGA 58.516 47.826 0.00 0.00 46.60 2.59
2901 3064 3.007398 GCTCCTCCATCACCTATTGGTAG 59.993 52.174 0.00 0.00 46.60 3.18
2902 3065 2.972713 GCTCCTCCATCACCTATTGGTA 59.027 50.000 0.00 0.00 46.60 3.25
2904 3067 1.270518 CGCTCCTCCATCACCTATTGG 60.271 57.143 0.00 0.00 39.83 3.16
2905 3068 1.414181 ACGCTCCTCCATCACCTATTG 59.586 52.381 0.00 0.00 0.00 1.90
2906 3069 1.414181 CACGCTCCTCCATCACCTATT 59.586 52.381 0.00 0.00 0.00 1.73
2907 3070 1.043816 CACGCTCCTCCATCACCTAT 58.956 55.000 0.00 0.00 0.00 2.57
3000 3163 5.981088 ATGTGTGTGATAATTGCCTTTGA 57.019 34.783 0.00 0.00 0.00 2.69
3029 3192 3.074412 GCGGGACAGGTTAATGATATGG 58.926 50.000 0.00 0.00 0.00 2.74
3090 3253 1.187087 AGATCGAGTGACCCACTTCC 58.813 55.000 0.82 0.00 45.44 3.46
3115 3278 5.127194 CCACATTCTGTTCTACACCTAGCTA 59.873 44.000 0.00 0.00 0.00 3.32
3116 3279 4.081420 CCACATTCTGTTCTACACCTAGCT 60.081 45.833 0.00 0.00 0.00 3.32
3117 3280 4.081642 TCCACATTCTGTTCTACACCTAGC 60.082 45.833 0.00 0.00 0.00 3.42
3148 3311 9.224267 AGTATATGCTATATGCTTTGTTCCTTG 57.776 33.333 0.00 0.00 43.37 3.61
3209 3372 2.038387 ATTCAACGGAGTATGTGCCC 57.962 50.000 0.00 0.00 45.00 5.36
3210 3373 4.054780 TCTATTCAACGGAGTATGTGCC 57.945 45.455 0.00 0.00 45.00 5.01
3211 3374 5.500290 CGTTTCTATTCAACGGAGTATGTGC 60.500 44.000 0.00 0.00 45.00 4.57
3212 3375 6.021055 CGTTTCTATTCAACGGAGTATGTG 57.979 41.667 0.00 0.00 45.00 3.21
3243 3406 2.032681 GCGAGGGTTGTTGGCTCT 59.967 61.111 0.00 0.00 0.00 4.09
3265 3432 1.679680 GCTGATTACACAGGCATGCAT 59.320 47.619 21.36 10.32 38.22 3.96
3267 3434 1.386533 AGCTGATTACACAGGCATGC 58.613 50.000 9.90 9.90 38.22 4.06
3268 3435 3.801698 AGTAGCTGATTACACAGGCATG 58.198 45.455 0.00 0.00 38.22 4.06
3269 3436 4.502259 GCTAGTAGCTGATTACACAGGCAT 60.502 45.833 15.16 0.00 38.45 4.40
3271 3438 3.385577 GCTAGTAGCTGATTACACAGGC 58.614 50.000 15.16 0.00 38.45 4.85
3320 3487 3.369157 GCCCCCACTTTGTGTACTAGTAG 60.369 52.174 1.87 0.00 0.00 2.57
3323 3490 1.628846 AGCCCCCACTTTGTGTACTAG 59.371 52.381 0.00 0.00 0.00 2.57
3538 3987 2.346803 GAATTGTAGCAGAAGTGGCGA 58.653 47.619 0.00 0.00 36.08 5.54
3568 4017 3.365265 CAGTTGACGGCCTTGGCC 61.365 66.667 20.15 20.15 0.00 5.36
3623 4075 1.202031 CGAGCGGCAAAAATACAGTCC 60.202 52.381 1.45 0.00 0.00 3.85
3624 4076 1.202031 CCGAGCGGCAAAAATACAGTC 60.202 52.381 1.45 0.00 0.00 3.51
3739 4207 2.030958 GGCGTGAAAACGATCGGGT 61.031 57.895 20.98 3.62 34.64 5.28
3865 4334 1.274167 GCATGCATTACATCCCATGGG 59.726 52.381 26.30 26.30 36.64 4.00
3867 4336 3.584834 CATGCATGCATTACATCCCATG 58.415 45.455 30.32 13.05 38.32 3.66
3894 4371 2.073816 ACACATACGTAAAGCCAGCAC 58.926 47.619 0.00 0.00 0.00 4.40
3895 4372 2.073056 CACACATACGTAAAGCCAGCA 58.927 47.619 0.00 0.00 0.00 4.41
3896 4373 2.073816 ACACACATACGTAAAGCCAGC 58.926 47.619 0.00 0.00 0.00 4.85
3897 4374 3.585862 AGACACACATACGTAAAGCCAG 58.414 45.455 0.00 0.00 0.00 4.85
3958 4435 0.108992 GGCGACGACACTCATGGTTA 60.109 55.000 0.00 0.00 0.00 2.85
3975 4452 0.319813 ATGGAGCAAAGCAAAACGGC 60.320 50.000 0.00 0.00 0.00 5.68
3976 4453 1.270550 AGATGGAGCAAAGCAAAACGG 59.729 47.619 0.00 0.00 0.00 4.44
3977 4454 2.589014 GAGATGGAGCAAAGCAAAACG 58.411 47.619 0.00 0.00 0.00 3.60
4024 4505 4.439057 TGGATATCAAACGAGGTAAGCAC 58.561 43.478 4.83 0.00 0.00 4.40
4087 4572 1.461091 TTTCCTCCGTGACAGCGACT 61.461 55.000 0.00 0.00 0.00 4.18
4231 4716 9.651718 GGTGCTATAAACGATAGAAAGAAAATG 57.348 33.333 0.00 0.00 40.18 2.32
4262 4747 3.517901 TCAAATGACGGAGGGAGTACAAT 59.482 43.478 0.00 0.00 0.00 2.71
4263 4748 2.901192 TCAAATGACGGAGGGAGTACAA 59.099 45.455 0.00 0.00 0.00 2.41
4264 4749 2.531771 TCAAATGACGGAGGGAGTACA 58.468 47.619 0.00 0.00 0.00 2.90
4265 4750 3.194968 TCTTCAAATGACGGAGGGAGTAC 59.805 47.826 0.00 0.00 0.00 2.73
4266 4751 3.437213 TCTTCAAATGACGGAGGGAGTA 58.563 45.455 0.00 0.00 0.00 2.59
4267 4752 2.234908 CTCTTCAAATGACGGAGGGAGT 59.765 50.000 0.00 0.00 0.00 3.85
4268 4753 2.234908 ACTCTTCAAATGACGGAGGGAG 59.765 50.000 13.53 0.00 32.22 4.30
4269 4754 2.028112 CACTCTTCAAATGACGGAGGGA 60.028 50.000 13.53 0.00 32.69 4.20
4270 4755 2.289694 ACACTCTTCAAATGACGGAGGG 60.290 50.000 11.12 11.12 35.25 4.30
4271 4756 3.045601 ACACTCTTCAAATGACGGAGG 57.954 47.619 13.53 7.76 32.22 4.30
4272 4757 4.810790 AGTACACTCTTCAAATGACGGAG 58.189 43.478 0.00 9.59 33.35 4.63
4273 4758 4.866508 AGTACACTCTTCAAATGACGGA 57.133 40.909 0.00 0.00 0.00 4.69
4274 4759 4.389077 GGAAGTACACTCTTCAAATGACGG 59.611 45.833 8.36 0.00 43.72 4.79
4275 4760 4.988540 TGGAAGTACACTCTTCAAATGACG 59.011 41.667 8.36 0.00 43.72 4.35
4276 4761 6.483640 AGTTGGAAGTACACTCTTCAAATGAC 59.516 38.462 8.36 0.00 43.72 3.06
4277 4762 6.591935 AGTTGGAAGTACACTCTTCAAATGA 58.408 36.000 8.36 0.00 43.72 2.57
4278 4763 6.867662 AGTTGGAAGTACACTCTTCAAATG 57.132 37.500 8.36 0.00 43.72 2.32
4279 4764 7.339466 ACAAAGTTGGAAGTACACTCTTCAAAT 59.661 33.333 8.36 0.00 43.72 2.32
4280 4765 6.657541 ACAAAGTTGGAAGTACACTCTTCAAA 59.342 34.615 8.36 1.35 43.72 2.69
4281 4766 6.177610 ACAAAGTTGGAAGTACACTCTTCAA 58.822 36.000 8.36 0.00 43.72 2.69
4282 4767 5.741011 ACAAAGTTGGAAGTACACTCTTCA 58.259 37.500 8.36 0.00 43.72 3.02
4283 4768 6.458342 CCAACAAAGTTGGAAGTACACTCTTC 60.458 42.308 21.24 0.00 42.06 2.87
4284 4769 5.357032 CCAACAAAGTTGGAAGTACACTCTT 59.643 40.000 21.24 0.00 42.06 2.85
4285 4770 4.881850 CCAACAAAGTTGGAAGTACACTCT 59.118 41.667 21.24 0.00 42.06 3.24
4286 4771 4.879545 TCCAACAAAGTTGGAAGTACACTC 59.120 41.667 24.83 0.00 44.90 3.51
4287 4772 4.850680 TCCAACAAAGTTGGAAGTACACT 58.149 39.130 24.83 0.00 44.90 3.55
4295 4780 5.245075 AGTTTGACTTTCCAACAAAGTTGGA 59.755 36.000 23.64 23.64 46.08 3.53
4296 4781 5.478407 AGTTTGACTTTCCAACAAAGTTGG 58.522 37.500 20.09 20.09 40.27 3.77
4297 4782 7.420184 AAAGTTTGACTTTCCAACAAAGTTG 57.580 32.000 0.00 3.00 44.47 3.16
4298 4783 8.445275 AAAAAGTTTGACTTTCCAACAAAGTT 57.555 26.923 6.53 0.00 46.78 2.66
4325 4810 9.781834 CATTATTGTATAAACACGGTCAAACAT 57.218 29.630 0.00 0.00 34.61 2.71
4326 4811 7.751348 GCATTATTGTATAAACACGGTCAAACA 59.249 33.333 0.00 0.00 34.61 2.83
4327 4812 7.751348 TGCATTATTGTATAAACACGGTCAAAC 59.249 33.333 0.00 0.00 34.61 2.93
4328 4813 7.751348 GTGCATTATTGTATAAACACGGTCAAA 59.249 33.333 0.00 0.00 34.61 2.69
4329 4814 7.244898 GTGCATTATTGTATAAACACGGTCAA 58.755 34.615 0.00 0.00 34.61 3.18
4330 4815 6.183360 GGTGCATTATTGTATAAACACGGTCA 60.183 38.462 0.00 0.00 34.61 4.02
4331 4816 6.183360 TGGTGCATTATTGTATAAACACGGTC 60.183 38.462 0.00 0.00 34.61 4.79
4332 4817 5.648526 TGGTGCATTATTGTATAAACACGGT 59.351 36.000 0.00 0.00 34.61 4.83
4333 4818 6.125327 TGGTGCATTATTGTATAAACACGG 57.875 37.500 0.00 0.00 34.61 4.94
4334 4819 7.024171 TGTTGGTGCATTATTGTATAAACACG 58.976 34.615 0.00 0.00 34.61 4.49
4335 4820 8.925161 ATGTTGGTGCATTATTGTATAAACAC 57.075 30.769 0.00 0.00 34.61 3.32
4336 4821 9.935241 AAATGTTGGTGCATTATTGTATAAACA 57.065 25.926 0.00 7.86 38.03 2.83
4340 4825 9.689976 GCATAAATGTTGGTGCATTATTGTATA 57.310 29.630 0.00 0.00 38.03 1.47
4341 4826 7.656948 GGCATAAATGTTGGTGCATTATTGTAT 59.343 33.333 0.00 0.00 38.03 2.29
4342 4827 6.983307 GGCATAAATGTTGGTGCATTATTGTA 59.017 34.615 0.00 0.00 38.03 2.41
4343 4828 5.816777 GGCATAAATGTTGGTGCATTATTGT 59.183 36.000 0.00 0.00 38.03 2.71
4344 4829 5.816258 TGGCATAAATGTTGGTGCATTATTG 59.184 36.000 0.00 0.00 38.03 1.90
4345 4830 5.987098 TGGCATAAATGTTGGTGCATTATT 58.013 33.333 0.00 0.00 38.03 1.40
4346 4831 5.611128 TGGCATAAATGTTGGTGCATTAT 57.389 34.783 0.00 0.00 38.03 1.28
4347 4832 5.453057 GGATGGCATAAATGTTGGTGCATTA 60.453 40.000 0.00 0.00 38.03 1.90
4348 4833 3.977134 TGGCATAAATGTTGGTGCATT 57.023 38.095 0.00 0.00 40.43 3.56
4349 4834 3.181463 GGATGGCATAAATGTTGGTGCAT 60.181 43.478 0.00 0.00 39.27 3.96
4350 4835 2.168106 GGATGGCATAAATGTTGGTGCA 59.832 45.455 0.00 0.00 39.27 4.57
4351 4836 2.168106 TGGATGGCATAAATGTTGGTGC 59.832 45.455 0.00 0.00 36.88 5.01
4352 4837 4.468765 TTGGATGGCATAAATGTTGGTG 57.531 40.909 0.00 0.00 0.00 4.17
4353 4838 5.697082 AATTGGATGGCATAAATGTTGGT 57.303 34.783 0.00 0.00 0.00 3.67
4354 4839 6.819284 ACTAATTGGATGGCATAAATGTTGG 58.181 36.000 0.00 0.00 0.00 3.77
4355 4840 7.596248 GCTACTAATTGGATGGCATAAATGTTG 59.404 37.037 0.00 2.34 0.00 3.33
4356 4841 7.287466 TGCTACTAATTGGATGGCATAAATGTT 59.713 33.333 0.00 0.00 0.00 2.71
4357 4842 6.777091 TGCTACTAATTGGATGGCATAAATGT 59.223 34.615 0.00 2.33 0.00 2.71
4358 4843 7.218228 TGCTACTAATTGGATGGCATAAATG 57.782 36.000 0.00 0.00 0.00 2.32
4359 4844 8.426569 AATGCTACTAATTGGATGGCATAAAT 57.573 30.769 15.79 0.61 37.85 1.40
4360 4845 7.838079 AATGCTACTAATTGGATGGCATAAA 57.162 32.000 15.79 0.00 37.85 1.40
4361 4846 8.382405 TCTAATGCTACTAATTGGATGGCATAA 58.618 33.333 15.79 0.00 37.85 1.90
4362 4847 7.917003 TCTAATGCTACTAATTGGATGGCATA 58.083 34.615 15.79 0.00 37.85 3.14
4363 4848 6.782986 TCTAATGCTACTAATTGGATGGCAT 58.217 36.000 0.00 0.00 40.04 4.40
4364 4849 6.186420 TCTAATGCTACTAATTGGATGGCA 57.814 37.500 0.00 3.45 0.00 4.92
4365 4850 7.148171 GGAATCTAATGCTACTAATTGGATGGC 60.148 40.741 0.00 0.00 35.95 4.40
4366 4851 8.105829 AGGAATCTAATGCTACTAATTGGATGG 58.894 37.037 0.00 0.00 35.95 3.51
4367 4852 8.944029 CAGGAATCTAATGCTACTAATTGGATG 58.056 37.037 0.00 0.00 35.95 3.51
4368 4853 8.884323 TCAGGAATCTAATGCTACTAATTGGAT 58.116 33.333 0.00 0.00 36.96 3.41
4369 4854 8.262601 TCAGGAATCTAATGCTACTAATTGGA 57.737 34.615 0.00 0.00 0.00 3.53
4435 4920 9.086336 CCGAGTTTGTGCAAAAATATATCAATT 57.914 29.630 5.11 0.00 31.33 2.32
4436 4921 8.250332 ACCGAGTTTGTGCAAAAATATATCAAT 58.750 29.630 5.11 0.00 31.33 2.57
4437 4922 7.598278 ACCGAGTTTGTGCAAAAATATATCAA 58.402 30.769 5.11 0.00 31.33 2.57
4438 4923 7.094592 TGACCGAGTTTGTGCAAAAATATATCA 60.095 33.333 5.11 4.10 31.33 2.15
4439 4924 7.247728 TGACCGAGTTTGTGCAAAAATATATC 58.752 34.615 5.11 1.66 31.33 1.63
4440 4925 7.151999 TGACCGAGTTTGTGCAAAAATATAT 57.848 32.000 5.11 0.00 31.33 0.86
4441 4926 6.561737 TGACCGAGTTTGTGCAAAAATATA 57.438 33.333 5.11 0.00 31.33 0.86
4442 4927 5.446143 TGACCGAGTTTGTGCAAAAATAT 57.554 34.783 5.11 0.00 31.33 1.28
4443 4928 4.902443 TGACCGAGTTTGTGCAAAAATA 57.098 36.364 5.11 0.00 31.33 1.40
4444 4929 3.791973 TGACCGAGTTTGTGCAAAAAT 57.208 38.095 5.11 0.00 31.33 1.82
4445 4930 3.577649 TTGACCGAGTTTGTGCAAAAA 57.422 38.095 0.00 0.00 31.33 1.94
4446 4931 3.246619 GTTTGACCGAGTTTGTGCAAAA 58.753 40.909 0.00 0.00 31.33 2.44
4447 4932 2.729467 CGTTTGACCGAGTTTGTGCAAA 60.729 45.455 0.00 0.00 0.00 3.68
4448 4933 1.202087 CGTTTGACCGAGTTTGTGCAA 60.202 47.619 0.00 0.00 0.00 4.08
4449 4934 0.375454 CGTTTGACCGAGTTTGTGCA 59.625 50.000 0.00 0.00 0.00 4.57
4450 4935 0.375803 ACGTTTGACCGAGTTTGTGC 59.624 50.000 0.00 0.00 0.00 4.57
4451 4936 2.094575 TCAACGTTTGACCGAGTTTGTG 59.905 45.455 0.00 0.00 34.08 3.33
4452 4937 2.348660 TCAACGTTTGACCGAGTTTGT 58.651 42.857 0.00 0.00 34.08 2.83
4453 4938 3.392769 TTCAACGTTTGACCGAGTTTG 57.607 42.857 0.00 0.00 39.87 2.93
4454 4939 4.625972 ATTTCAACGTTTGACCGAGTTT 57.374 36.364 0.00 0.00 39.87 2.66
4455 4940 4.812626 ACTATTTCAACGTTTGACCGAGTT 59.187 37.500 0.00 0.00 39.87 3.01
4456 4941 4.374399 ACTATTTCAACGTTTGACCGAGT 58.626 39.130 0.00 0.00 39.87 4.18
4457 4942 4.985044 ACTATTTCAACGTTTGACCGAG 57.015 40.909 0.00 0.00 39.87 4.63
4458 4943 5.293814 TCAAACTATTTCAACGTTTGACCGA 59.706 36.000 11.43 0.00 46.60 4.69
4459 4944 5.503498 TCAAACTATTTCAACGTTTGACCG 58.497 37.500 11.43 0.00 46.60 4.79
4463 4948 5.827666 AGGGTCAAACTATTTCAACGTTTG 58.172 37.500 0.00 7.56 45.29 2.93
4464 4949 6.095720 TGAAGGGTCAAACTATTTCAACGTTT 59.904 34.615 0.00 0.00 0.00 3.60
4465 4950 5.591067 TGAAGGGTCAAACTATTTCAACGTT 59.409 36.000 0.00 0.00 0.00 3.99
4466 4951 5.127491 TGAAGGGTCAAACTATTTCAACGT 58.873 37.500 0.00 0.00 0.00 3.99
4467 4952 5.682943 TGAAGGGTCAAACTATTTCAACG 57.317 39.130 0.00 0.00 0.00 4.10
4468 4953 6.801575 TGTTGAAGGGTCAAACTATTTCAAC 58.198 36.000 16.64 16.64 45.29 3.18
4469 4954 7.411486 TTGTTGAAGGGTCAAACTATTTCAA 57.589 32.000 0.00 0.00 45.29 2.69
4470 4955 7.411486 TTTGTTGAAGGGTCAAACTATTTCA 57.589 32.000 0.00 0.00 45.29 2.69
4471 4956 8.887036 ATTTTGTTGAAGGGTCAAACTATTTC 57.113 30.769 0.00 0.00 45.29 2.17
4472 4957 9.108284 CAATTTTGTTGAAGGGTCAAACTATTT 57.892 29.630 0.00 0.00 45.29 1.40
4473 4958 7.714813 CCAATTTTGTTGAAGGGTCAAACTATT 59.285 33.333 0.00 0.00 45.29 1.73
4474 4959 7.070571 TCCAATTTTGTTGAAGGGTCAAACTAT 59.929 33.333 0.00 0.00 45.29 2.12
4475 4960 6.381420 TCCAATTTTGTTGAAGGGTCAAACTA 59.619 34.615 0.00 0.00 45.29 2.24
4476 4961 5.188751 TCCAATTTTGTTGAAGGGTCAAACT 59.811 36.000 0.00 0.00 45.29 2.66
4477 4962 5.423886 TCCAATTTTGTTGAAGGGTCAAAC 58.576 37.500 0.00 0.00 45.29 2.93
4478 4963 5.683876 TCCAATTTTGTTGAAGGGTCAAA 57.316 34.783 0.00 0.00 45.29 2.69
4479 4964 5.188751 ACTTCCAATTTTGTTGAAGGGTCAA 59.811 36.000 11.47 0.00 41.57 3.18
4480 4965 4.714308 ACTTCCAATTTTGTTGAAGGGTCA 59.286 37.500 11.47 0.00 0.00 4.02
4481 4966 5.276461 ACTTCCAATTTTGTTGAAGGGTC 57.724 39.130 11.47 0.00 0.00 4.46
4482 4967 5.659079 TGTACTTCCAATTTTGTTGAAGGGT 59.341 36.000 11.47 0.00 0.00 4.34
4483 4968 5.983118 GTGTACTTCCAATTTTGTTGAAGGG 59.017 40.000 11.47 0.00 0.00 3.95
4484 4969 6.805713 AGTGTACTTCCAATTTTGTTGAAGG 58.194 36.000 11.47 0.00 0.00 3.46
4485 4970 7.707104 AGAGTGTACTTCCAATTTTGTTGAAG 58.293 34.615 0.00 7.39 0.00 3.02
4486 4971 7.639113 AGAGTGTACTTCCAATTTTGTTGAA 57.361 32.000 0.00 0.00 0.00 2.69
4487 4972 7.639113 AAGAGTGTACTTCCAATTTTGTTGA 57.361 32.000 0.00 0.00 0.00 3.18
4488 4973 9.796120 TTAAAGAGTGTACTTCCAATTTTGTTG 57.204 29.630 0.00 0.00 0.00 3.33
4491 4976 9.463443 CCTTTAAAGAGTGTACTTCCAATTTTG 57.537 33.333 16.98 0.00 0.00 2.44
4492 4977 9.416284 TCCTTTAAAGAGTGTACTTCCAATTTT 57.584 29.630 16.98 0.00 0.00 1.82
4493 4978 8.847196 GTCCTTTAAAGAGTGTACTTCCAATTT 58.153 33.333 16.98 0.00 0.00 1.82
4494 4979 7.172703 CGTCCTTTAAAGAGTGTACTTCCAATT 59.827 37.037 16.98 0.00 0.00 2.32
4495 4980 6.649557 CGTCCTTTAAAGAGTGTACTTCCAAT 59.350 38.462 16.98 0.00 0.00 3.16
4496 4981 5.987347 CGTCCTTTAAAGAGTGTACTTCCAA 59.013 40.000 16.98 0.00 0.00 3.53
4497 4982 5.510179 CCGTCCTTTAAAGAGTGTACTTCCA 60.510 44.000 16.98 0.00 0.00 3.53
4498 4983 4.928020 CCGTCCTTTAAAGAGTGTACTTCC 59.072 45.833 16.98 0.00 0.00 3.46
4499 4984 5.776744 TCCGTCCTTTAAAGAGTGTACTTC 58.223 41.667 16.98 0.00 0.00 3.01
4500 4985 5.537674 TCTCCGTCCTTTAAAGAGTGTACTT 59.462 40.000 16.98 0.00 0.00 2.24
4501 4986 5.075493 TCTCCGTCCTTTAAAGAGTGTACT 58.925 41.667 16.98 0.00 0.00 2.73
4502 4987 5.382618 TCTCCGTCCTTTAAAGAGTGTAC 57.617 43.478 16.98 5.84 0.00 2.90
4503 4988 4.082354 GCTCTCCGTCCTTTAAAGAGTGTA 60.082 45.833 16.98 0.00 36.64 2.90
4504 4989 3.306156 GCTCTCCGTCCTTTAAAGAGTGT 60.306 47.826 16.98 0.00 36.64 3.55
4505 4990 3.254892 GCTCTCCGTCCTTTAAAGAGTG 58.745 50.000 16.98 7.73 36.64 3.51
4506 4991 2.094649 CGCTCTCCGTCCTTTAAAGAGT 60.095 50.000 16.98 0.00 36.64 3.24
4507 4992 2.531206 CGCTCTCCGTCCTTTAAAGAG 58.469 52.381 16.98 5.97 37.20 2.85
4508 4993 2.649331 CGCTCTCCGTCCTTTAAAGA 57.351 50.000 16.98 0.24 0.00 2.52
4519 5004 2.752144 AGTACGAAATACGCTCTCCG 57.248 50.000 0.00 0.00 46.94 4.63
4520 5005 2.534757 GCAAGTACGAAATACGCTCTCC 59.465 50.000 0.00 0.00 46.94 3.71
4521 5006 3.436496 AGCAAGTACGAAATACGCTCTC 58.564 45.455 0.00 0.00 46.94 3.20
4522 5007 3.119602 TGAGCAAGTACGAAATACGCTCT 60.120 43.478 9.60 0.00 42.91 4.09
4523 5008 3.000971 GTGAGCAAGTACGAAATACGCTC 60.001 47.826 0.00 0.00 46.94 5.03
4524 5009 2.921754 GTGAGCAAGTACGAAATACGCT 59.078 45.455 0.00 0.00 46.94 5.07
4525 5010 2.028883 GGTGAGCAAGTACGAAATACGC 59.971 50.000 0.00 0.00 46.94 4.42
4536 5021 0.882042 CAGCTTGTCGGTGAGCAAGT 60.882 55.000 0.00 0.00 43.75 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.