Multiple sequence alignment - TraesCS5B01G176500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G176500 chr5B 100.000 6081 0 0 1 6081 322333869 322327789 0.000000e+00 11230.0
1 TraesCS5B01G176500 chr5B 94.444 54 1 1 2501 2554 322331303 322331252 1.400000e-11 82.4
2 TraesCS5B01G176500 chr5B 94.444 54 1 1 2567 2618 322331369 322331316 1.400000e-11 82.4
3 TraesCS5B01G176500 chr5A 96.043 3285 74 20 1238 4476 376843012 376839738 0.000000e+00 5295.0
4 TraesCS5B01G176500 chr5A 88.694 1371 69 25 4517 5847 376839738 376838414 0.000000e+00 1594.0
5 TraesCS5B01G176500 chr5A 88.731 772 44 10 425 1173 376844041 376843290 0.000000e+00 904.0
6 TraesCS5B01G176500 chr5A 92.079 101 3 1 5845 5945 376838384 376838289 2.960000e-28 137.0
7 TraesCS5B01G176500 chr5A 96.296 54 2 0 2501 2554 376841685 376841632 8.400000e-14 89.8
8 TraesCS5B01G176500 chr5D 93.227 3337 120 42 2567 5832 285028290 285024989 0.000000e+00 4813.0
9 TraesCS5B01G176500 chr5D 92.142 2596 105 26 1 2554 285030775 285028237 0.000000e+00 3572.0
10 TraesCS5B01G176500 chr5D 93.333 60 4 0 3395 3454 290044099 290044158 8.400000e-14 89.8
11 TraesCS5B01G176500 chr1B 91.912 136 11 0 5945 6080 688401711 688401846 2.240000e-44 191.0
12 TraesCS5B01G176500 chr1B 90.226 133 12 1 5949 6081 579006572 579006441 8.100000e-39 172.0
13 TraesCS5B01G176500 chr1B 88.194 144 13 2 5942 6081 334305140 334304997 1.050000e-37 169.0
14 TraesCS5B01G176500 chr7B 93.077 130 8 1 5953 6081 651454855 651454984 8.050000e-44 189.0
15 TraesCS5B01G176500 chr7B 89.286 140 13 1 5942 6081 591726376 591726513 2.250000e-39 174.0
16 TraesCS5B01G176500 chr1D 91.538 130 9 2 5953 6081 487579228 487579356 1.740000e-40 178.0
17 TraesCS5B01G176500 chr2B 90.441 136 10 2 5949 6081 73998091 73997956 6.260000e-40 176.0
18 TraesCS5B01G176500 chr2B 89.437 142 12 2 5943 6081 237590358 237590499 6.260000e-40 176.0
19 TraesCS5B01G176500 chr1A 90.226 133 13 0 5949 6081 91477707 91477839 2.250000e-39 174.0
20 TraesCS5B01G176500 chr1A 80.612 98 13 5 1122 1219 45696599 45696690 3.040000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G176500 chr5B 322327789 322333869 6080 True 3798.266667 11230 96.2960 1 6081 3 chr5B.!!$R1 6080
1 TraesCS5B01G176500 chr5A 376838289 376844041 5752 True 1603.960000 5295 92.3686 425 5945 5 chr5A.!!$R1 5520
2 TraesCS5B01G176500 chr5D 285024989 285030775 5786 True 4192.500000 4813 92.6845 1 5832 2 chr5D.!!$R1 5831

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
561 576 0.036875 ACCCAAACCTAGCTGACAGC 59.963 55.000 20.12 20.12 42.84 4.40 F
595 615 1.064946 GAGATGTGCCCTCGTCTCG 59.935 63.158 4.42 0.00 39.57 4.04 F
1968 2244 0.033366 CAGTGATGTCGGTGACCACA 59.967 55.000 1.11 5.89 0.00 4.17 F
3198 3556 0.461961 CGTCTGAGGGAAGGATGGTC 59.538 60.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1932 2208 0.673333 CTGCAAGGTACACGGCATCA 60.673 55.000 5.24 0.0 34.57 3.07 R
2561 2903 1.202794 TCAGCTCATTTGTGGACTGCA 60.203 47.619 0.00 0.0 0.00 4.41 R
3324 3682 0.706433 ATGGGCTCAGGGTTGTCATT 59.294 50.000 0.00 0.0 0.00 2.57 R
5105 5518 1.076024 TCTTACTGTCCTACGGGTGGT 59.924 52.381 0.00 0.0 0.00 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.856664 GACACTAGTTTCTTGAGACGTCA 58.143 43.478 19.50 0.00 0.00 4.35
27 28 6.642950 CACTAGTTTCTTGAGACGTCATTTCT 59.357 38.462 19.50 7.23 30.85 2.52
43 44 0.950836 TTCTGTTGGTTCACATGGCG 59.049 50.000 0.00 0.00 0.00 5.69
46 47 0.179032 TGTTGGTTCACATGGCGTCT 60.179 50.000 0.00 0.00 0.00 4.18
50 51 2.027073 GTTCACATGGCGTCTGCGA 61.027 57.895 0.00 0.00 44.10 5.10
58 59 1.954146 GGCGTCTGCGAACAACTCA 60.954 57.895 0.00 0.00 44.10 3.41
61 62 1.418373 CGTCTGCGAACAACTCATCA 58.582 50.000 0.00 0.00 41.33 3.07
63 64 2.135139 GTCTGCGAACAACTCATCACA 58.865 47.619 0.00 0.00 0.00 3.58
72 73 4.897509 ACAACTCATCACAAGGAGATGA 57.102 40.909 6.02 5.82 46.96 2.92
90 91 4.353191 AGATGAAGGAACCTGGATATGCAT 59.647 41.667 3.79 3.79 0.00 3.96
91 92 3.824133 TGAAGGAACCTGGATATGCATG 58.176 45.455 10.16 0.00 0.00 4.06
92 93 2.283145 AGGAACCTGGATATGCATGC 57.717 50.000 11.82 11.82 0.00 4.06
93 94 1.496001 AGGAACCTGGATATGCATGCA 59.504 47.619 25.04 25.04 0.00 3.96
94 95 2.109480 AGGAACCTGGATATGCATGCAT 59.891 45.455 33.92 33.92 40.19 3.96
118 119 4.890088 TGGCACGTAGATGAAGTAACTTT 58.110 39.130 0.00 0.00 0.00 2.66
156 157 1.512926 CGCTGCAAAGGTGTAGAAGT 58.487 50.000 0.00 0.00 39.68 3.01
171 172 4.464951 TGTAGAAGTGATGTTGTACCGGAT 59.535 41.667 9.46 0.00 0.00 4.18
179 180 0.179081 GTTGTACCGGATGCCTCCTC 60.179 60.000 9.46 0.00 39.65 3.71
190 191 3.708121 GGATGCCTCCTCAATTCCAAATT 59.292 43.478 0.00 0.00 38.65 1.82
198 199 6.284891 TCCTCAATTCCAAATTTCCACATC 57.715 37.500 0.00 0.00 0.00 3.06
220 221 4.451435 TCTGTATTATAGTCTCCGTCGCAG 59.549 45.833 0.00 0.00 0.00 5.18
222 223 5.299949 TGTATTATAGTCTCCGTCGCAGTA 58.700 41.667 0.00 0.00 0.00 2.74
224 225 2.328819 ATAGTCTCCGTCGCAGTACT 57.671 50.000 0.00 0.00 0.00 2.73
235 236 2.096218 GTCGCAGTACTTGAAGCAAAGG 60.096 50.000 0.00 0.00 0.00 3.11
257 258 6.754193 AGGCGATAATTTTTGAAAACCTCAA 58.246 32.000 0.00 0.00 42.48 3.02
321 327 7.540745 TGCTTTTAATAAAGAATCTTCGTTGCC 59.459 33.333 0.00 0.00 42.78 4.52
322 328 7.253321 GCTTTTAATAAAGAATCTTCGTTGCCG 60.253 37.037 0.00 0.00 42.78 5.69
326 332 2.163818 AGAATCTTCGTTGCCGTTGA 57.836 45.000 0.00 0.00 35.01 3.18
330 336 3.520290 ATCTTCGTTGCCGTTGATCTA 57.480 42.857 0.00 0.00 35.01 1.98
406 421 9.914131 GAAACTATATCTTTTTGAAAGCAAGGT 57.086 29.630 0.00 0.00 35.04 3.50
415 430 9.912634 TCTTTTTGAAAGCAAGGTTATCAATAG 57.087 29.630 8.98 9.40 35.04 1.73
416 431 9.912634 CTTTTTGAAAGCAAGGTTATCAATAGA 57.087 29.630 8.98 0.00 35.04 1.98
419 434 9.912634 TTTGAAAGCAAGGTTATCAATAGAAAG 57.087 29.630 8.98 0.00 35.04 2.62
420 435 8.635765 TGAAAGCAAGGTTATCAATAGAAAGT 57.364 30.769 0.00 0.00 0.00 2.66
421 436 9.733556 TGAAAGCAAGGTTATCAATAGAAAGTA 57.266 29.630 0.00 0.00 0.00 2.24
422 437 9.989869 GAAAGCAAGGTTATCAATAGAAAGTAC 57.010 33.333 0.00 0.00 0.00 2.73
423 438 9.740710 AAAGCAAGGTTATCAATAGAAAGTACT 57.259 29.630 0.00 0.00 0.00 2.73
494 509 2.253513 CCAACGCGTGGGAGAATTT 58.746 52.632 29.46 0.00 44.64 1.82
496 511 0.179225 CAACGCGTGGGAGAATTTCG 60.179 55.000 14.98 0.00 0.00 3.46
561 576 0.036875 ACCCAAACCTAGCTGACAGC 59.963 55.000 20.12 20.12 42.84 4.40
595 615 1.064946 GAGATGTGCCCTCGTCTCG 59.935 63.158 4.42 0.00 39.57 4.04
616 636 3.369157 CGTCTTTCCCTTCCTTATTCCGT 60.369 47.826 0.00 0.00 0.00 4.69
624 648 4.021719 CCCTTCCTTATTCCGTTCGCTATA 60.022 45.833 0.00 0.00 0.00 1.31
691 718 5.576447 ATCGACCATAAACAAATCAACCC 57.424 39.130 0.00 0.00 0.00 4.11
693 720 4.827835 TCGACCATAAACAAATCAACCCAA 59.172 37.500 0.00 0.00 0.00 4.12
725 758 9.545105 TTTAATTAATATAAGCCCGAGAAACGA 57.455 29.630 0.00 0.00 45.77 3.85
741 774 6.089016 CGAGAAACGAGACAAAATTAGCAGTA 59.911 38.462 0.00 0.00 45.77 2.74
821 856 3.039526 CCTCCCTCCCTCCCTCCT 61.040 72.222 0.00 0.00 0.00 3.69
822 857 2.612251 CTCCCTCCCTCCCTCCTC 59.388 72.222 0.00 0.00 0.00 3.71
823 858 3.036959 TCCCTCCCTCCCTCCTCC 61.037 72.222 0.00 0.00 0.00 4.30
836 871 2.218115 CTCCTCCACCGTCTCCTCCT 62.218 65.000 0.00 0.00 0.00 3.69
837 872 1.755008 CCTCCACCGTCTCCTCCTC 60.755 68.421 0.00 0.00 0.00 3.71
838 873 1.755008 CTCCACCGTCTCCTCCTCC 60.755 68.421 0.00 0.00 0.00 4.30
839 874 2.218115 CTCCACCGTCTCCTCCTCCT 62.218 65.000 0.00 0.00 0.00 3.69
840 875 1.755008 CCACCGTCTCCTCCTCCTC 60.755 68.421 0.00 0.00 0.00 3.71
841 876 1.755008 CACCGTCTCCTCCTCCTCC 60.755 68.421 0.00 0.00 0.00 4.30
922 957 1.819632 CCCCCTCGCTCAAAATCCG 60.820 63.158 0.00 0.00 0.00 4.18
1158 1221 2.768344 ATCTTCGGGCCCCACGAT 60.768 61.111 18.66 9.82 40.38 3.73
1932 2208 1.000396 GGAGAACATGGGCTGGCTT 60.000 57.895 0.00 0.00 0.00 4.35
1968 2244 0.033366 CAGTGATGTCGGTGACCACA 59.967 55.000 1.11 5.89 0.00 4.17
2212 2488 8.808529 CGTAAGTTATCTCAGTATCAAACCTTG 58.191 37.037 0.00 0.00 0.00 3.61
2225 2501 3.450457 TCAAACCTTGTTTTCATGCCTGT 59.550 39.130 0.00 0.00 0.00 4.00
2275 2552 2.495270 TCGGCAATTTGGCATGTACAAT 59.505 40.909 21.18 0.00 43.94 2.71
2392 2671 8.833493 CACATCATGACATTATCAAAAGCTCTA 58.167 33.333 0.00 0.00 41.93 2.43
2506 2789 8.338259 GCTGACATACTGTTATAATTTCCACAG 58.662 37.037 8.36 8.36 42.08 3.66
2578 2920 2.798976 TTTGCAGTCCACAAATGAGC 57.201 45.000 0.00 0.00 32.27 4.26
2579 2921 1.985473 TTGCAGTCCACAAATGAGCT 58.015 45.000 0.00 0.00 0.00 4.09
2580 2922 1.241165 TGCAGTCCACAAATGAGCTG 58.759 50.000 0.00 0.00 33.38 4.24
2581 2923 1.202794 TGCAGTCCACAAATGAGCTGA 60.203 47.619 0.00 0.00 32.54 4.26
2582 2924 2.089980 GCAGTCCACAAATGAGCTGAT 58.910 47.619 0.00 0.00 32.54 2.90
2583 2925 3.273434 GCAGTCCACAAATGAGCTGATA 58.727 45.455 0.00 0.00 32.54 2.15
2584 2926 3.311871 GCAGTCCACAAATGAGCTGATAG 59.688 47.826 0.00 0.00 32.54 2.08
2585 2927 3.875727 CAGTCCACAAATGAGCTGATAGG 59.124 47.826 0.00 0.00 32.54 2.57
2586 2928 3.521126 AGTCCACAAATGAGCTGATAGGT 59.479 43.478 0.00 0.00 0.00 3.08
2587 2929 4.018960 AGTCCACAAATGAGCTGATAGGTT 60.019 41.667 0.00 0.00 0.00 3.50
2588 2930 4.095483 GTCCACAAATGAGCTGATAGGTTG 59.905 45.833 0.00 0.00 0.00 3.77
2589 2931 4.012374 CCACAAATGAGCTGATAGGTTGT 58.988 43.478 0.00 0.00 0.00 3.32
2590 2932 4.142534 CCACAAATGAGCTGATAGGTTGTG 60.143 45.833 17.34 17.34 42.40 3.33
2591 2933 4.012374 ACAAATGAGCTGATAGGTTGTGG 58.988 43.478 1.54 0.00 0.00 4.17
2592 2934 2.338577 ATGAGCTGATAGGTTGTGGC 57.661 50.000 0.00 0.00 0.00 5.01
2593 2935 1.279496 TGAGCTGATAGGTTGTGGCT 58.721 50.000 0.00 0.00 0.00 4.75
2594 2936 1.630369 TGAGCTGATAGGTTGTGGCTT 59.370 47.619 0.00 0.00 0.00 4.35
2595 2937 2.837591 TGAGCTGATAGGTTGTGGCTTA 59.162 45.455 0.00 0.00 0.00 3.09
2596 2938 3.455910 TGAGCTGATAGGTTGTGGCTTAT 59.544 43.478 0.00 0.00 0.00 1.73
2597 2939 4.080356 TGAGCTGATAGGTTGTGGCTTATT 60.080 41.667 0.00 0.00 0.00 1.40
2598 2940 4.860022 AGCTGATAGGTTGTGGCTTATTT 58.140 39.130 0.00 0.00 0.00 1.40
2599 2941 5.264395 AGCTGATAGGTTGTGGCTTATTTT 58.736 37.500 0.00 0.00 0.00 1.82
2600 2942 5.716703 AGCTGATAGGTTGTGGCTTATTTTT 59.283 36.000 0.00 0.00 0.00 1.94
2907 3265 7.167535 TCAGTTGTGATTCTGGTGAATTATGA 58.832 34.615 0.00 0.00 42.43 2.15
2984 3342 5.435686 TGTCTAGCCATGTTAGTGGAATT 57.564 39.130 0.00 0.00 42.02 2.17
3065 3423 9.944663 TTGTTGCTTTAAAATATTATAGAGCGG 57.055 29.630 0.00 0.00 30.56 5.52
3182 3540 5.693555 GGTTACCTATGTAAAGTATGGCGTC 59.306 44.000 0.00 0.00 38.62 5.19
3198 3556 0.461961 CGTCTGAGGGAAGGATGGTC 59.538 60.000 0.00 0.00 0.00 4.02
3289 3647 6.521162 TGACTACTGTATTGCTGACTTTTGA 58.479 36.000 0.00 0.00 0.00 2.69
3323 3681 7.155328 TGGTAACTCAAACATGTTTTGTGTTT 58.845 30.769 26.79 17.71 40.81 2.83
3324 3682 8.304596 TGGTAACTCAAACATGTTTTGTGTTTA 58.695 29.630 26.79 17.06 40.81 2.01
3616 3982 5.615289 AGTGCTTCTGTTGTAGAACTTCAT 58.385 37.500 4.21 0.00 40.43 2.57
3620 3986 8.507249 GTGCTTCTGTTGTAGAACTTCATTAAT 58.493 33.333 4.21 0.00 40.43 1.40
3758 4126 5.632034 AGGGGAATTCAAGATACAGTACC 57.368 43.478 7.93 0.00 0.00 3.34
3762 4131 7.404980 AGGGGAATTCAAGATACAGTACCTTTA 59.595 37.037 7.93 0.00 0.00 1.85
3913 4282 6.352516 AGTTGATCTACAGAATAAGGCTTGG 58.647 40.000 10.69 0.00 0.00 3.61
4005 4375 6.916360 TTTCTCCCAAACATAGCATTCTTT 57.084 33.333 0.00 0.00 0.00 2.52
4432 4824 1.528161 GTTTGCTTGAGTTTGGCATGC 59.472 47.619 9.90 9.90 35.84 4.06
4519 4911 1.203100 AGATGGAAGCTGCACCCTTTT 60.203 47.619 1.02 0.00 0.00 2.27
4599 4991 7.639039 TCGGATTGCAATAGTAAATCAATGTC 58.361 34.615 12.97 0.00 32.96 3.06
4637 5029 2.807967 GCATCACACTGCTTTGTACTCA 59.192 45.455 0.00 0.00 39.12 3.41
4651 5043 5.996669 TTGTACTCATGAAGCTGCATATG 57.003 39.130 6.94 5.72 0.00 1.78
4667 5059 3.004734 GCATATGCCACCCACATTTAGTC 59.995 47.826 17.26 0.00 34.31 2.59
4713 5105 5.699839 ACACAAATAGGCAATTTTCTCGAC 58.300 37.500 0.00 0.00 35.54 4.20
4772 5164 1.891919 GCCAGAACGGTTGAGCACA 60.892 57.895 0.00 0.00 36.97 4.57
4788 5201 4.213270 TGAGCACAACTAGTTTTTCCATCG 59.787 41.667 5.07 0.00 0.00 3.84
5091 5504 2.852495 AATTCGTGACGGATGGCGCT 62.852 55.000 7.64 0.00 0.00 5.92
5142 5559 8.166422 ACAGTAAGAATTTTGGGACTGTAAAG 57.834 34.615 3.76 0.00 44.18 1.85
5297 5717 1.757699 CCTGTAGGAAGGAGGCTGTAC 59.242 57.143 0.00 0.00 40.02 2.90
5335 5755 7.857885 GCAGTTATCGAGATTATTTTCTTTGGG 59.142 37.037 0.00 0.00 0.00 4.12
5337 5757 9.681062 AGTTATCGAGATTATTTTCTTTGGGAA 57.319 29.630 0.00 0.00 0.00 3.97
5379 5801 4.528206 TGATCTGTTTTAGCCTCTCACTCA 59.472 41.667 0.00 0.00 0.00 3.41
5427 5849 1.833630 GAGATGGATGACAGGTGTGGA 59.166 52.381 0.00 0.00 0.00 4.02
5500 5923 3.181487 CGCTTTTTGGTTAGATGGATGGG 60.181 47.826 0.00 0.00 0.00 4.00
5537 5960 1.838568 GACCAGGCGTCCGTTTTGTC 61.839 60.000 0.00 0.00 35.23 3.18
5541 5964 0.179067 AGGCGTCCGTTTTGTCTGAA 60.179 50.000 0.00 0.00 0.00 3.02
5542 5965 0.872388 GGCGTCCGTTTTGTCTGAAT 59.128 50.000 0.00 0.00 0.00 2.57
5543 5966 1.399727 GGCGTCCGTTTTGTCTGAATG 60.400 52.381 0.00 0.00 0.00 2.67
5564 5987 5.264060 TGATGATTTGACGTCGTTTTCTC 57.736 39.130 11.62 4.69 0.00 2.87
5576 5999 1.457303 CGTTTTCTCGACTTCAGGCAG 59.543 52.381 0.00 0.00 0.00 4.85
5593 6016 1.344458 CAGAGTCACGCTGTCATGAC 58.656 55.000 19.27 19.27 44.64 3.06
5605 6028 5.643348 ACGCTGTCATGACATTTAATTCTCA 59.357 36.000 28.00 1.59 41.01 3.27
5606 6029 6.149308 ACGCTGTCATGACATTTAATTCTCAA 59.851 34.615 28.00 1.31 41.01 3.02
5607 6030 7.022979 CGCTGTCATGACATTTAATTCTCAAA 58.977 34.615 28.00 0.86 41.01 2.69
5608 6031 7.699391 CGCTGTCATGACATTTAATTCTCAAAT 59.301 33.333 28.00 0.00 41.01 2.32
5609 6032 9.017669 GCTGTCATGACATTTAATTCTCAAATC 57.982 33.333 28.00 0.00 41.01 2.17
5641 6065 3.931468 CGCTGTTTGAGATTGAGATGACT 59.069 43.478 0.00 0.00 0.00 3.41
5646 6070 7.065563 GCTGTTTGAGATTGAGATGACTATGTT 59.934 37.037 0.00 0.00 0.00 2.71
5649 6073 9.552114 GTTTGAGATTGAGATGACTATGTTTTG 57.448 33.333 0.00 0.00 0.00 2.44
5650 6074 8.853077 TTGAGATTGAGATGACTATGTTTTGT 57.147 30.769 0.00 0.00 0.00 2.83
5651 6075 8.853077 TGAGATTGAGATGACTATGTTTTGTT 57.147 30.769 0.00 0.00 0.00 2.83
5652 6076 8.724229 TGAGATTGAGATGACTATGTTTTGTTG 58.276 33.333 0.00 0.00 0.00 3.33
5654 6078 7.884877 AGATTGAGATGACTATGTTTTGTTGGA 59.115 33.333 0.00 0.00 0.00 3.53
5655 6079 6.801539 TGAGATGACTATGTTTTGTTGGAC 57.198 37.500 0.00 0.00 0.00 4.02
5656 6080 5.408299 TGAGATGACTATGTTTTGTTGGACG 59.592 40.000 0.00 0.00 0.00 4.79
5657 6081 5.305585 AGATGACTATGTTTTGTTGGACGT 58.694 37.500 0.00 0.00 0.00 4.34
5658 6082 4.804608 TGACTATGTTTTGTTGGACGTG 57.195 40.909 0.00 0.00 0.00 4.49
5659 6083 4.193090 TGACTATGTTTTGTTGGACGTGT 58.807 39.130 0.00 0.00 0.00 4.49
5660 6084 4.034626 TGACTATGTTTTGTTGGACGTGTG 59.965 41.667 0.00 0.00 0.00 3.82
5661 6085 3.942748 ACTATGTTTTGTTGGACGTGTGT 59.057 39.130 0.00 0.00 0.00 3.72
5681 6107 6.421801 GTGTGTAAATGTAGGTAACGACTTGT 59.578 38.462 0.00 0.00 43.43 3.16
5682 6108 6.642131 TGTGTAAATGTAGGTAACGACTTGTC 59.358 38.462 0.00 0.00 43.43 3.18
5683 6109 5.858049 TGTAAATGTAGGTAACGACTTGTCG 59.142 40.000 19.74 19.74 43.43 4.35
5684 6110 4.771590 AATGTAGGTAACGACTTGTCGA 57.228 40.909 26.65 5.40 43.43 4.20
5685 6111 3.542712 TGTAGGTAACGACTTGTCGAC 57.457 47.619 26.65 9.11 43.43 4.20
5686 6112 3.141398 TGTAGGTAACGACTTGTCGACT 58.859 45.455 26.65 19.26 43.43 4.18
5687 6113 3.565482 TGTAGGTAACGACTTGTCGACTT 59.435 43.478 26.65 15.09 43.43 3.01
5688 6114 3.009301 AGGTAACGACTTGTCGACTTG 57.991 47.619 26.65 11.60 46.39 3.16
5689 6115 2.620115 AGGTAACGACTTGTCGACTTGA 59.380 45.455 26.65 1.92 46.39 3.02
5690 6116 3.255149 AGGTAACGACTTGTCGACTTGAT 59.745 43.478 26.65 3.29 46.39 2.57
5691 6117 3.607209 GGTAACGACTTGTCGACTTGATC 59.393 47.826 26.65 8.19 36.85 2.92
5692 6118 3.644884 AACGACTTGTCGACTTGATCT 57.355 42.857 26.65 1.90 36.85 2.75
5693 6119 2.935042 ACGACTTGTCGACTTGATCTG 58.065 47.619 26.65 3.41 36.85 2.90
5694 6120 2.293677 ACGACTTGTCGACTTGATCTGT 59.706 45.455 26.65 4.04 36.85 3.41
5695 6121 3.243434 ACGACTTGTCGACTTGATCTGTT 60.243 43.478 26.65 0.03 36.85 3.16
5696 6122 3.362237 CGACTTGTCGACTTGATCTGTTC 59.638 47.826 17.92 1.58 34.64 3.18
5697 6123 3.654414 ACTTGTCGACTTGATCTGTTCC 58.346 45.455 17.92 0.00 0.00 3.62
5698 6124 3.069586 ACTTGTCGACTTGATCTGTTCCA 59.930 43.478 17.92 0.00 0.00 3.53
5699 6125 3.026630 TGTCGACTTGATCTGTTCCAC 57.973 47.619 17.92 0.00 0.00 4.02
5700 6126 1.986378 GTCGACTTGATCTGTTCCACG 59.014 52.381 8.70 0.00 0.00 4.94
5704 6130 3.679980 CGACTTGATCTGTTCCACGAAAT 59.320 43.478 0.00 0.00 0.00 2.17
5709 6135 4.141287 TGATCTGTTCCACGAAATTTGGT 58.859 39.130 0.00 0.00 35.42 3.67
5800 6241 0.471617 ATAGCATGGGTGGTCTCTGC 59.528 55.000 0.00 0.00 37.28 4.26
5837 6278 0.669318 TCCCTGAAACATGCGACGAC 60.669 55.000 0.00 0.00 0.00 4.34
5841 6282 1.390123 CTGAAACATGCGACGACGAAT 59.610 47.619 12.29 2.43 42.66 3.34
5906 6379 6.210796 GTTTGTTAAGGCCTTAATTGTTCGT 58.789 36.000 34.61 6.36 37.37 3.85
5913 6386 6.827586 AGGCCTTAATTGTTCGTATTTGAA 57.172 33.333 0.00 0.00 0.00 2.69
5924 6397 5.929992 TGTTCGTATTTGAAGTCCGAGATTT 59.070 36.000 0.00 0.00 0.00 2.17
5947 6420 7.933215 TTTAGTCCTTCAAATACCTTTAGGC 57.067 36.000 0.00 0.00 39.32 3.93
5948 6421 4.514401 AGTCCTTCAAATACCTTTAGGCG 58.486 43.478 0.00 0.00 39.32 5.52
5949 6422 3.626217 GTCCTTCAAATACCTTTAGGCGG 59.374 47.826 0.00 0.00 39.32 6.13
5950 6423 2.949644 CCTTCAAATACCTTTAGGCGGG 59.050 50.000 0.00 0.00 39.32 6.13
5951 6424 2.721425 TCAAATACCTTTAGGCGGGG 57.279 50.000 0.00 0.00 39.32 5.73
5952 6425 1.213430 TCAAATACCTTTAGGCGGGGG 59.787 52.381 0.00 0.00 39.32 5.40
5953 6426 0.106369 AAATACCTTTAGGCGGGGGC 60.106 55.000 0.00 0.00 39.32 5.80
5954 6427 1.283381 AATACCTTTAGGCGGGGGCA 61.283 55.000 0.00 0.00 39.32 5.36
5955 6428 1.283381 ATACCTTTAGGCGGGGGCAA 61.283 55.000 0.00 0.00 39.32 4.52
5956 6429 2.200923 TACCTTTAGGCGGGGGCAAC 62.201 60.000 0.00 0.00 39.32 4.17
5957 6430 2.355115 CTTTAGGCGGGGGCAACT 59.645 61.111 0.00 0.00 0.00 3.16
5958 6431 1.605453 CTTTAGGCGGGGGCAACTA 59.395 57.895 0.00 0.00 0.00 2.24
5959 6432 0.034863 CTTTAGGCGGGGGCAACTAA 60.035 55.000 0.00 0.00 0.00 2.24
5960 6433 0.626916 TTTAGGCGGGGGCAACTAAT 59.373 50.000 0.00 0.00 0.00 1.73
5961 6434 0.626916 TTAGGCGGGGGCAACTAATT 59.373 50.000 0.00 0.00 0.00 1.40
5962 6435 1.509373 TAGGCGGGGGCAACTAATTA 58.491 50.000 0.00 0.00 0.00 1.40
5963 6436 0.626916 AGGCGGGGGCAACTAATTAA 59.373 50.000 0.00 0.00 0.00 1.40
5964 6437 0.742505 GGCGGGGGCAACTAATTAAC 59.257 55.000 0.00 0.00 0.00 2.01
5965 6438 0.379316 GCGGGGGCAACTAATTAACG 59.621 55.000 0.00 0.00 0.00 3.18
5966 6439 2.013058 GCGGGGGCAACTAATTAACGA 61.013 52.381 0.00 0.00 0.00 3.85
5967 6440 1.937899 CGGGGGCAACTAATTAACGAG 59.062 52.381 0.00 0.00 0.00 4.18
5968 6441 1.674441 GGGGGCAACTAATTAACGAGC 59.326 52.381 0.00 0.00 0.00 5.03
5969 6442 1.329599 GGGGCAACTAATTAACGAGCG 59.670 52.381 0.00 0.00 0.00 5.03
5970 6443 1.267882 GGGCAACTAATTAACGAGCGC 60.268 52.381 0.00 0.00 0.00 5.92
5971 6444 1.664151 GGCAACTAATTAACGAGCGCT 59.336 47.619 11.27 11.27 0.00 5.92
5972 6445 2.285660 GGCAACTAATTAACGAGCGCTC 60.286 50.000 27.64 27.64 0.00 5.03
5973 6446 2.285660 GCAACTAATTAACGAGCGCTCC 60.286 50.000 30.66 13.79 0.00 4.70
5974 6447 3.187700 CAACTAATTAACGAGCGCTCCT 58.812 45.455 30.66 20.33 0.00 3.69
5975 6448 3.521947 ACTAATTAACGAGCGCTCCTT 57.478 42.857 30.66 26.03 0.00 3.36
5976 6449 3.445857 ACTAATTAACGAGCGCTCCTTC 58.554 45.455 30.66 8.16 0.00 3.46
5977 6450 1.278238 AATTAACGAGCGCTCCTTCG 58.722 50.000 30.66 22.24 0.00 3.79
5978 6451 0.527817 ATTAACGAGCGCTCCTTCGG 60.528 55.000 30.66 18.71 0.00 4.30
5979 6452 2.552585 TTAACGAGCGCTCCTTCGGG 62.553 60.000 30.66 17.99 0.00 5.14
5989 6462 4.082523 CCTTCGGGAGCCTCGCAA 62.083 66.667 9.61 2.18 37.25 4.85
5990 6463 2.815647 CTTCGGGAGCCTCGCAAC 60.816 66.667 9.61 0.00 0.00 4.17
5991 6464 4.735132 TTCGGGAGCCTCGCAACG 62.735 66.667 9.61 0.36 0.00 4.10
5993 6466 4.514577 CGGGAGCCTCGCAACGAT 62.515 66.667 9.61 0.00 34.61 3.73
5994 6467 2.586357 GGGAGCCTCGCAACGATC 60.586 66.667 3.57 0.00 34.61 3.69
5995 6468 2.184322 GGAGCCTCGCAACGATCA 59.816 61.111 0.00 0.00 34.61 2.92
5996 6469 1.880340 GGAGCCTCGCAACGATCAG 60.880 63.158 0.00 0.00 34.61 2.90
5997 6470 2.510238 AGCCTCGCAACGATCAGC 60.510 61.111 0.00 0.00 34.61 4.26
5998 6471 2.815211 GCCTCGCAACGATCAGCA 60.815 61.111 0.00 0.00 34.61 4.41
5999 6472 3.084579 CCTCGCAACGATCAGCAC 58.915 61.111 0.00 0.00 34.61 4.40
6000 6473 2.456119 CCTCGCAACGATCAGCACC 61.456 63.158 0.00 0.00 34.61 5.01
6001 6474 1.737735 CTCGCAACGATCAGCACCA 60.738 57.895 0.00 0.00 34.61 4.17
6002 6475 1.959899 CTCGCAACGATCAGCACCAC 61.960 60.000 0.00 0.00 34.61 4.16
6003 6476 2.029288 CGCAACGATCAGCACCACT 61.029 57.895 0.00 0.00 0.00 4.00
6004 6477 1.568612 CGCAACGATCAGCACCACTT 61.569 55.000 0.00 0.00 0.00 3.16
6005 6478 0.110056 GCAACGATCAGCACCACTTG 60.110 55.000 0.00 0.00 0.00 3.16
6006 6479 0.518636 CAACGATCAGCACCACTTGG 59.481 55.000 0.00 0.00 42.17 3.61
6007 6480 1.237285 AACGATCAGCACCACTTGGC 61.237 55.000 0.00 0.00 39.32 4.52
6008 6481 2.743752 CGATCAGCACCACTTGGCG 61.744 63.158 0.00 0.00 39.32 5.69
6009 6482 3.044059 GATCAGCACCACTTGGCGC 62.044 63.158 0.00 0.00 43.29 6.53
6010 6483 3.848301 ATCAGCACCACTTGGCGCA 62.848 57.895 10.83 0.00 45.28 6.09
6011 6484 4.332637 CAGCACCACTTGGCGCAC 62.333 66.667 10.83 0.00 45.28 5.34
6012 6485 4.569180 AGCACCACTTGGCGCACT 62.569 61.111 10.83 0.00 45.28 4.40
6013 6486 4.030452 GCACCACTTGGCGCACTC 62.030 66.667 10.83 0.00 42.55 3.51
6014 6487 2.591429 CACCACTTGGCGCACTCA 60.591 61.111 10.83 0.00 39.32 3.41
6015 6488 2.591715 ACCACTTGGCGCACTCAC 60.592 61.111 10.83 0.00 39.32 3.51
6016 6489 2.591429 CCACTTGGCGCACTCACA 60.591 61.111 10.83 0.00 0.00 3.58
6017 6490 2.186160 CCACTTGGCGCACTCACAA 61.186 57.895 10.83 2.34 0.00 3.33
6018 6491 1.009675 CACTTGGCGCACTCACAAC 60.010 57.895 10.83 0.00 0.00 3.32
6019 6492 2.186826 ACTTGGCGCACTCACAACC 61.187 57.895 10.83 0.00 0.00 3.77
6020 6493 2.124529 TTGGCGCACTCACAACCA 60.125 55.556 10.83 0.00 0.00 3.67
6021 6494 1.518056 CTTGGCGCACTCACAACCAT 61.518 55.000 10.83 0.00 0.00 3.55
6022 6495 1.106351 TTGGCGCACTCACAACCATT 61.106 50.000 10.83 0.00 0.00 3.16
6023 6496 1.210155 GGCGCACTCACAACCATTC 59.790 57.895 10.83 0.00 0.00 2.67
6024 6497 1.154413 GCGCACTCACAACCATTCG 60.154 57.895 0.30 0.00 0.00 3.34
6025 6498 1.841663 GCGCACTCACAACCATTCGT 61.842 55.000 0.30 0.00 0.00 3.85
6026 6499 0.163788 CGCACTCACAACCATTCGTC 59.836 55.000 0.00 0.00 0.00 4.20
6027 6500 1.225855 GCACTCACAACCATTCGTCA 58.774 50.000 0.00 0.00 0.00 4.35
6028 6501 1.069906 GCACTCACAACCATTCGTCAC 60.070 52.381 0.00 0.00 0.00 3.67
6029 6502 1.192312 CACTCACAACCATTCGTCACG 59.808 52.381 0.00 0.00 0.00 4.35
6030 6503 1.202486 ACTCACAACCATTCGTCACGT 60.202 47.619 0.00 0.00 0.00 4.49
6031 6504 1.192312 CTCACAACCATTCGTCACGTG 59.808 52.381 9.94 9.94 0.00 4.49
6032 6505 0.934496 CACAACCATTCGTCACGTGT 59.066 50.000 16.51 0.00 0.00 4.49
6033 6506 1.070843 CACAACCATTCGTCACGTGTC 60.071 52.381 16.51 9.31 0.00 3.67
6034 6507 0.160813 CAACCATTCGTCACGTGTCG 59.839 55.000 25.70 25.70 0.00 4.35
6035 6508 1.554042 AACCATTCGTCACGTGTCGC 61.554 55.000 26.58 12.64 0.00 5.19
6037 6510 3.467119 ATTCGTCACGTGTCGCGC 61.467 61.111 26.58 0.00 46.11 6.86
6038 6511 3.891586 ATTCGTCACGTGTCGCGCT 62.892 57.895 26.58 12.73 46.11 5.92
6041 6514 3.461982 GTCACGTGTCGCGCTCTG 61.462 66.667 16.51 0.00 46.11 3.35
6042 6515 4.700365 TCACGTGTCGCGCTCTGG 62.700 66.667 16.51 0.00 46.11 3.86
6053 6526 3.801129 GCTCTGGGCGCTTTCTAC 58.199 61.111 7.64 0.00 0.00 2.59
6054 6527 2.167861 GCTCTGGGCGCTTTCTACG 61.168 63.158 7.64 0.00 0.00 3.51
6055 6528 1.519455 CTCTGGGCGCTTTCTACGG 60.519 63.158 7.64 0.00 0.00 4.02
6056 6529 2.511600 CTGGGCGCTTTCTACGGG 60.512 66.667 7.64 0.00 0.00 5.28
6057 6530 3.310860 CTGGGCGCTTTCTACGGGT 62.311 63.158 7.64 0.00 0.00 5.28
6058 6531 2.046604 GGGCGCTTTCTACGGGTT 60.047 61.111 7.64 0.00 0.00 4.11
6059 6532 1.673337 GGGCGCTTTCTACGGGTTT 60.673 57.895 7.64 0.00 0.00 3.27
6060 6533 1.239296 GGGCGCTTTCTACGGGTTTT 61.239 55.000 7.64 0.00 0.00 2.43
6061 6534 0.594602 GGCGCTTTCTACGGGTTTTT 59.405 50.000 7.64 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.642950 CAGAAATGACGTCTCAAGAAACTAGT 59.357 38.462 17.92 0.00 0.00 2.57
15 16 3.560068 GTGAACCAACAGAAATGACGTCT 59.440 43.478 17.92 0.00 0.00 4.18
22 23 2.030007 CGCCATGTGAACCAACAGAAAT 60.030 45.455 0.00 0.00 32.52 2.17
27 28 0.179032 AGACGCCATGTGAACCAACA 60.179 50.000 0.00 0.00 0.00 3.33
43 44 2.135139 TGTGATGAGTTGTTCGCAGAC 58.865 47.619 0.00 0.00 34.32 3.51
46 47 1.872952 CCTTGTGATGAGTTGTTCGCA 59.127 47.619 0.00 0.00 0.00 5.10
50 51 5.233083 TCATCTCCTTGTGATGAGTTGTT 57.767 39.130 5.08 0.00 43.47 2.83
58 59 3.848975 AGGTTCCTTCATCTCCTTGTGAT 59.151 43.478 0.00 0.00 0.00 3.06
61 62 2.307098 CCAGGTTCCTTCATCTCCTTGT 59.693 50.000 0.00 0.00 0.00 3.16
63 64 2.921221 TCCAGGTTCCTTCATCTCCTT 58.079 47.619 0.00 0.00 0.00 3.36
72 73 2.091720 TGCATGCATATCCAGGTTCCTT 60.092 45.455 18.46 0.00 0.00 3.36
91 92 1.863454 CTTCATCTACGTGCCAGATGC 59.137 52.381 18.11 0.00 45.96 3.91
93 94 4.402793 AGTTACTTCATCTACGTGCCAGAT 59.597 41.667 0.00 0.00 32.90 2.90
94 95 3.762288 AGTTACTTCATCTACGTGCCAGA 59.238 43.478 0.00 0.00 0.00 3.86
118 119 1.374125 CCACGCGGTTCTGACATGA 60.374 57.895 12.47 0.00 0.00 3.07
156 157 0.908910 AGGCATCCGGTACAACATCA 59.091 50.000 0.00 0.00 0.00 3.07
171 172 3.515104 GGAAATTTGGAATTGAGGAGGCA 59.485 43.478 0.00 0.00 0.00 4.75
190 191 6.776116 ACGGAGACTATAATACAGATGTGGAA 59.224 38.462 0.00 0.00 0.00 3.53
198 199 4.213694 ACTGCGACGGAGACTATAATACAG 59.786 45.833 23.89 6.08 0.00 2.74
208 209 0.520404 TCAAGTACTGCGACGGAGAC 59.480 55.000 23.89 15.57 0.00 3.36
220 221 4.939509 TTATCGCCTTTGCTTCAAGTAC 57.060 40.909 0.00 0.00 34.43 2.73
222 223 5.391312 AAATTATCGCCTTTGCTTCAAGT 57.609 34.783 0.00 0.00 34.43 3.16
224 225 6.219473 TCAAAAATTATCGCCTTTGCTTCAA 58.781 32.000 0.00 0.00 34.43 2.69
390 405 9.912634 TCTATTGATAACCTTGCTTTCAAAAAG 57.087 29.630 0.00 0.00 30.81 2.27
393 408 9.912634 CTTTCTATTGATAACCTTGCTTTCAAA 57.087 29.630 0.00 0.00 30.81 2.69
395 410 8.635765 ACTTTCTATTGATAACCTTGCTTTCA 57.364 30.769 0.00 0.00 0.00 2.69
396 411 9.989869 GTACTTTCTATTGATAACCTTGCTTTC 57.010 33.333 0.00 0.00 0.00 2.62
398 413 9.167311 CAGTACTTTCTATTGATAACCTTGCTT 57.833 33.333 0.00 0.00 0.00 3.91
399 414 8.322091 ACAGTACTTTCTATTGATAACCTTGCT 58.678 33.333 0.00 0.00 0.00 3.91
400 415 8.494016 ACAGTACTTTCTATTGATAACCTTGC 57.506 34.615 0.00 0.00 0.00 4.01
446 461 2.671963 GTCCCCGGCTGTGTTTCC 60.672 66.667 0.00 0.00 0.00 3.13
513 528 1.401905 GTGGAAGCCGTTGGATTGATC 59.598 52.381 0.00 0.00 28.48 2.92
514 529 1.463674 GTGGAAGCCGTTGGATTGAT 58.536 50.000 0.00 0.00 28.48 2.57
561 576 2.921634 TCTCATCTTTGTCTCCGTCG 57.078 50.000 0.00 0.00 0.00 5.12
595 615 4.217836 ACGGAATAAGGAAGGGAAAGAC 57.782 45.455 0.00 0.00 0.00 3.01
624 648 2.287188 GGATCGATGATGCAACGCAATT 60.287 45.455 0.54 0.00 43.62 2.32
813 848 1.755008 GAGACGGTGGAGGAGGGAG 60.755 68.421 0.00 0.00 0.00 4.30
814 849 2.359404 GAGACGGTGGAGGAGGGA 59.641 66.667 0.00 0.00 0.00 4.20
816 851 1.755008 GAGGAGACGGTGGAGGAGG 60.755 68.421 0.00 0.00 0.00 4.30
818 853 2.212794 GAGGAGGAGACGGTGGAGGA 62.213 65.000 0.00 0.00 0.00 3.71
819 854 1.755008 GAGGAGGAGACGGTGGAGG 60.755 68.421 0.00 0.00 0.00 4.30
821 856 2.212794 GAGGAGGAGGAGACGGTGGA 62.213 65.000 0.00 0.00 0.00 4.02
822 857 1.755008 GAGGAGGAGGAGACGGTGG 60.755 68.421 0.00 0.00 0.00 4.61
823 858 1.755008 GGAGGAGGAGGAGACGGTG 60.755 68.421 0.00 0.00 0.00 4.94
836 871 1.123077 CGGTGATTGATGGAGGAGGA 58.877 55.000 0.00 0.00 0.00 3.71
837 872 0.533755 GCGGTGATTGATGGAGGAGG 60.534 60.000 0.00 0.00 0.00 4.30
838 873 0.178767 TGCGGTGATTGATGGAGGAG 59.821 55.000 0.00 0.00 0.00 3.69
839 874 0.839277 ATGCGGTGATTGATGGAGGA 59.161 50.000 0.00 0.00 0.00 3.71
840 875 1.233019 GATGCGGTGATTGATGGAGG 58.767 55.000 0.00 0.00 0.00 4.30
841 876 1.233019 GGATGCGGTGATTGATGGAG 58.767 55.000 0.00 0.00 0.00 3.86
1119 1182 1.049289 GGCGGTCCTTGTAGGAGGAT 61.049 60.000 0.00 0.00 46.90 3.24
1932 2208 0.673333 CTGCAAGGTACACGGCATCA 60.673 55.000 5.24 0.00 34.57 3.07
1968 2244 1.653115 GTGATCGCCGTATCCGACT 59.347 57.895 0.00 0.00 37.56 4.18
2197 2473 6.446318 GCATGAAAACAAGGTTTGATACTGA 58.554 36.000 0.00 0.00 0.00 3.41
2199 2475 5.539955 AGGCATGAAAACAAGGTTTGATACT 59.460 36.000 0.00 0.00 0.00 2.12
2212 2488 4.782019 TGGTCAATACAGGCATGAAAAC 57.218 40.909 4.84 0.00 0.00 2.43
2275 2552 6.338146 CAGGGACGTAATACTTTCAGAATCA 58.662 40.000 0.00 0.00 0.00 2.57
2392 2671 8.361139 GGTATGACTATACTGTTACTGAATGCT 58.639 37.037 0.00 0.00 39.30 3.79
2506 2789 3.065925 GCCACAAAACCTATCAGCTCATC 59.934 47.826 0.00 0.00 0.00 2.92
2557 2899 3.132646 AGCTCATTTGTGGACTGCAAAAA 59.867 39.130 0.00 0.00 38.98 1.94
2558 2900 2.694628 AGCTCATTTGTGGACTGCAAAA 59.305 40.909 0.00 0.00 38.98 2.44
2559 2901 2.034939 CAGCTCATTTGTGGACTGCAAA 59.965 45.455 0.00 0.00 39.69 3.68
2560 2902 1.610038 CAGCTCATTTGTGGACTGCAA 59.390 47.619 0.00 0.00 0.00 4.08
2561 2903 1.202794 TCAGCTCATTTGTGGACTGCA 60.203 47.619 0.00 0.00 0.00 4.41
2562 2904 1.527034 TCAGCTCATTTGTGGACTGC 58.473 50.000 0.00 0.00 0.00 4.40
2563 2905 3.875727 CCTATCAGCTCATTTGTGGACTG 59.124 47.826 0.00 0.00 0.00 3.51
2564 2906 3.521126 ACCTATCAGCTCATTTGTGGACT 59.479 43.478 0.00 0.00 0.00 3.85
2565 2907 3.878778 ACCTATCAGCTCATTTGTGGAC 58.121 45.455 0.00 0.00 0.00 4.02
2566 2908 4.263462 ACAACCTATCAGCTCATTTGTGGA 60.263 41.667 0.00 0.00 0.00 4.02
2567 2909 4.012374 ACAACCTATCAGCTCATTTGTGG 58.988 43.478 0.00 0.00 0.00 4.17
2568 2910 4.142534 CCACAACCTATCAGCTCATTTGTG 60.143 45.833 6.64 6.64 41.19 3.33
2569 2911 4.012374 CCACAACCTATCAGCTCATTTGT 58.988 43.478 0.00 0.00 0.00 2.83
2570 2912 3.181493 GCCACAACCTATCAGCTCATTTG 60.181 47.826 0.00 0.00 0.00 2.32
2571 2913 3.019564 GCCACAACCTATCAGCTCATTT 58.980 45.455 0.00 0.00 0.00 2.32
2572 2914 2.240667 AGCCACAACCTATCAGCTCATT 59.759 45.455 0.00 0.00 0.00 2.57
2573 2915 1.842562 AGCCACAACCTATCAGCTCAT 59.157 47.619 0.00 0.00 0.00 2.90
2574 2916 1.279496 AGCCACAACCTATCAGCTCA 58.721 50.000 0.00 0.00 0.00 4.26
2575 2917 2.409948 AAGCCACAACCTATCAGCTC 57.590 50.000 0.00 0.00 0.00 4.09
2576 2918 4.510167 AATAAGCCACAACCTATCAGCT 57.490 40.909 0.00 0.00 0.00 4.24
2577 2919 5.582689 AAAATAAGCCACAACCTATCAGC 57.417 39.130 0.00 0.00 0.00 4.26
2597 2939 8.000127 ACTGTTAGGAACACCCTATTGTAAAAA 59.000 33.333 0.00 0.00 46.44 1.94
2598 2940 7.519927 ACTGTTAGGAACACCCTATTGTAAAA 58.480 34.615 0.00 0.00 46.44 1.52
2599 2941 7.081857 ACTGTTAGGAACACCCTATTGTAAA 57.918 36.000 0.00 0.00 46.44 2.01
2600 2942 6.691255 ACTGTTAGGAACACCCTATTGTAA 57.309 37.500 0.00 0.00 46.44 2.41
2601 2943 6.043474 ACAACTGTTAGGAACACCCTATTGTA 59.957 38.462 0.00 0.00 46.44 2.41
2602 2944 5.163131 ACAACTGTTAGGAACACCCTATTGT 60.163 40.000 0.00 0.00 46.44 2.71
2603 2945 5.181245 CACAACTGTTAGGAACACCCTATTG 59.819 44.000 0.00 0.00 46.44 1.90
2604 2946 5.163131 ACACAACTGTTAGGAACACCCTATT 60.163 40.000 0.00 0.00 46.44 1.73
2832 3190 6.250951 CACCGTATTCTAAGTCGTCTCTTTTC 59.749 42.308 0.00 0.00 0.00 2.29
2872 3230 6.703607 CCAGAATCACAACTGATAGATGGTAC 59.296 42.308 0.00 0.00 35.96 3.34
2907 3265 6.183360 TGCCAACATAAAATAAGTTGTGTGGT 60.183 34.615 0.00 0.00 40.64 4.16
2959 3317 3.838317 TCCACTAACATGGCTAGACAACT 59.162 43.478 0.13 0.00 39.85 3.16
2984 3342 9.553064 AAGCAAAATACAACAACCAAATAATCA 57.447 25.926 0.00 0.00 0.00 2.57
3065 3423 4.644685 TGCCATCTTACAGCCCTTTAATTC 59.355 41.667 0.00 0.00 0.00 2.17
3125 3483 2.988010 ATTATGGCACGCTTCTGAGA 57.012 45.000 0.00 0.00 0.00 3.27
3182 3540 5.379706 AATAAAGACCATCCTTCCCTCAG 57.620 43.478 0.00 0.00 0.00 3.35
3289 3647 5.652994 TGTTTGAGTTACCAAAACAAGCT 57.347 34.783 9.72 0.00 37.72 3.74
3323 3681 1.367346 TGGGCTCAGGGTTGTCATTA 58.633 50.000 0.00 0.00 0.00 1.90
3324 3682 0.706433 ATGGGCTCAGGGTTGTCATT 59.294 50.000 0.00 0.00 0.00 2.57
3594 3959 5.931441 ATGAAGTTCTACAACAGAAGCAC 57.069 39.130 4.17 0.00 44.02 4.40
3686 4054 6.032094 CAGAATCCACCATCTCAAATTTTCG 58.968 40.000 0.00 0.00 0.00 3.46
3758 4126 3.319122 GGGGGTGAGCTATTGCAATAAAG 59.681 47.826 19.32 12.11 42.74 1.85
3762 4131 0.929244 AGGGGGTGAGCTATTGCAAT 59.071 50.000 17.56 17.56 42.74 3.56
3913 4282 8.559536 TGAAGACAAGTCAAATGTGATAGAAAC 58.440 33.333 2.72 0.00 35.80 2.78
3955 4325 6.610075 AGCTTCATACATGTTGGGATTTTT 57.390 33.333 2.30 0.00 0.00 1.94
3973 4343 6.975197 GCTATGTTTGGGAGAAAAATAGCTTC 59.025 38.462 16.87 0.00 35.72 3.86
4432 4824 2.190161 CGCAAATCACTTGGATGCATG 58.810 47.619 2.46 0.00 36.02 4.06
4535 4927 5.576774 TGTTCGAATGACAACTGCTGTATAG 59.423 40.000 0.00 0.00 38.84 1.31
4599 4991 3.611433 GCAATCAGCAGCCTAAACG 57.389 52.632 0.00 0.00 44.79 3.60
4622 5014 3.750130 AGCTTCATGAGTACAAAGCAGTG 59.250 43.478 15.30 0.00 40.34 3.66
4637 5029 1.325355 GGTGGCATATGCAGCTTCAT 58.675 50.000 28.07 3.83 44.36 2.57
4651 5043 4.705023 AGTAAATGACTAAATGTGGGTGGC 59.295 41.667 0.00 0.00 36.27 5.01
4667 5059 7.538678 GTGTTGGCACAGAATTAGAAGTAAATG 59.461 37.037 0.00 0.00 44.64 2.32
4772 5164 5.476945 AGGAAATGCGATGGAAAAACTAGTT 59.523 36.000 1.12 1.12 0.00 2.24
4774 5166 5.335127 CAGGAAATGCGATGGAAAAACTAG 58.665 41.667 0.00 0.00 0.00 2.57
4788 5201 2.737679 GCAATGCTCTTCCAGGAAATGC 60.738 50.000 15.63 15.63 33.96 3.56
5103 5516 2.014010 TACTGTCCTACGGGTGGTTT 57.986 50.000 0.00 0.00 0.00 3.27
5104 5517 1.897802 CTTACTGTCCTACGGGTGGTT 59.102 52.381 0.00 0.00 0.00 3.67
5105 5518 1.076024 TCTTACTGTCCTACGGGTGGT 59.924 52.381 0.00 0.00 0.00 4.16
5106 5519 1.843368 TCTTACTGTCCTACGGGTGG 58.157 55.000 0.00 0.00 0.00 4.61
5107 5520 4.467198 AATTCTTACTGTCCTACGGGTG 57.533 45.455 0.00 0.00 0.00 4.61
5142 5559 8.308207 CCTAGCTCTAACCTTCCTTTCATATAC 58.692 40.741 0.00 0.00 0.00 1.47
5213 5630 2.431782 TCCCCGCATACTGGTAACTTAC 59.568 50.000 0.00 0.00 37.61 2.34
5225 5642 2.567169 CAGTAGGATCATTCCCCGCATA 59.433 50.000 0.00 0.00 43.76 3.14
5229 5646 0.035458 GGCAGTAGGATCATTCCCCG 59.965 60.000 0.00 0.00 43.76 5.73
5231 5648 1.439543 AGGGCAGTAGGATCATTCCC 58.560 55.000 0.00 0.00 43.76 3.97
5297 5717 5.291858 TCTCGATAACTGCTTTGCTTGTATG 59.708 40.000 0.00 0.00 0.00 2.39
5335 5755 4.067896 CACCTCACCTGCCACATATATTC 58.932 47.826 0.00 0.00 0.00 1.75
5337 5757 3.317406 TCACCTCACCTGCCACATATAT 58.683 45.455 0.00 0.00 0.00 0.86
5338 5758 2.758130 TCACCTCACCTGCCACATATA 58.242 47.619 0.00 0.00 0.00 0.86
5379 5801 7.502226 TGTTTGACCAGACAAGAGAAACATTAT 59.498 33.333 0.00 0.00 0.00 1.28
5479 5902 3.769300 ACCCATCCATCTAACCAAAAAGC 59.231 43.478 0.00 0.00 0.00 3.51
5500 5923 1.799994 GTCTCCGCCGTAGAGATCTAC 59.200 57.143 9.53 9.53 42.16 2.59
5537 5960 4.847365 ACGACGTCAAATCATCATTCAG 57.153 40.909 17.16 0.00 0.00 3.02
5541 5964 5.444613 CGAGAAAACGACGTCAAATCATCAT 60.445 40.000 17.16 0.00 35.09 2.45
5542 5965 4.143410 CGAGAAAACGACGTCAAATCATCA 60.143 41.667 17.16 0.00 35.09 3.07
5543 5966 4.089493 TCGAGAAAACGACGTCAAATCATC 59.911 41.667 17.16 5.73 37.37 2.92
5564 5987 0.730834 CGTGACTCTGCCTGAAGTCG 60.731 60.000 0.00 0.00 34.32 4.18
5616 6040 0.449388 CTCAATCTCAAACAGCGCCC 59.551 55.000 2.29 0.00 0.00 6.13
5641 6065 6.432607 TTTACACACGTCCAACAAAACATA 57.567 33.333 0.00 0.00 0.00 2.29
5646 6070 4.966965 ACATTTACACACGTCCAACAAA 57.033 36.364 0.00 0.00 0.00 2.83
5649 6073 4.060205 ACCTACATTTACACACGTCCAAC 58.940 43.478 0.00 0.00 0.00 3.77
5650 6074 4.339872 ACCTACATTTACACACGTCCAA 57.660 40.909 0.00 0.00 0.00 3.53
5651 6075 5.229423 GTTACCTACATTTACACACGTCCA 58.771 41.667 0.00 0.00 0.00 4.02
5652 6076 4.324402 CGTTACCTACATTTACACACGTCC 59.676 45.833 0.00 0.00 0.00 4.79
5654 6078 4.917415 GTCGTTACCTACATTTACACACGT 59.083 41.667 0.00 0.00 0.00 4.49
5655 6079 5.156355 AGTCGTTACCTACATTTACACACG 58.844 41.667 0.00 0.00 0.00 4.49
5656 6080 6.421801 ACAAGTCGTTACCTACATTTACACAC 59.578 38.462 0.00 0.00 0.00 3.82
5657 6081 6.514947 ACAAGTCGTTACCTACATTTACACA 58.485 36.000 0.00 0.00 0.00 3.72
5658 6082 6.183359 CGACAAGTCGTTACCTACATTTACAC 60.183 42.308 14.03 0.00 46.99 2.90
5659 6083 5.858049 CGACAAGTCGTTACCTACATTTACA 59.142 40.000 14.03 0.00 46.99 2.41
5660 6084 6.310020 CGACAAGTCGTTACCTACATTTAC 57.690 41.667 14.03 0.00 46.99 2.01
5681 6107 1.883926 TCGTGGAACAGATCAAGTCGA 59.116 47.619 0.00 0.00 41.80 4.20
5682 6108 2.347697 TCGTGGAACAGATCAAGTCG 57.652 50.000 0.00 0.00 41.80 4.18
5683 6109 5.613358 AATTTCGTGGAACAGATCAAGTC 57.387 39.130 0.00 0.00 41.80 3.01
5684 6110 5.278463 CCAAATTTCGTGGAACAGATCAAGT 60.278 40.000 0.00 0.00 41.80 3.16
5685 6111 5.156355 CCAAATTTCGTGGAACAGATCAAG 58.844 41.667 0.00 0.00 41.80 3.02
5686 6112 4.582656 ACCAAATTTCGTGGAACAGATCAA 59.417 37.500 1.57 0.00 41.80 2.57
5687 6113 4.141287 ACCAAATTTCGTGGAACAGATCA 58.859 39.130 1.57 0.00 41.80 2.92
5688 6114 4.766404 ACCAAATTTCGTGGAACAGATC 57.234 40.909 1.57 0.00 41.80 2.75
5689 6115 4.340950 ACAACCAAATTTCGTGGAACAGAT 59.659 37.500 1.57 0.00 41.80 2.90
5690 6116 3.697045 ACAACCAAATTTCGTGGAACAGA 59.303 39.130 1.57 0.00 41.80 3.41
5691 6117 4.040445 ACAACCAAATTTCGTGGAACAG 57.960 40.909 1.57 0.00 41.80 3.16
5692 6118 3.181485 GGACAACCAAATTTCGTGGAACA 60.181 43.478 1.57 0.00 39.62 3.18
5693 6119 3.181485 TGGACAACCAAATTTCGTGGAAC 60.181 43.478 1.57 0.00 43.91 3.62
5694 6120 3.024547 TGGACAACCAAATTTCGTGGAA 58.975 40.909 1.57 0.00 43.91 3.53
5695 6121 2.621055 CTGGACAACCAAATTTCGTGGA 59.379 45.455 1.57 0.00 46.32 4.02
5696 6122 2.862140 GCTGGACAACCAAATTTCGTGG 60.862 50.000 0.00 0.00 46.32 4.94
5697 6123 2.223688 TGCTGGACAACCAAATTTCGTG 60.224 45.455 0.00 0.00 46.32 4.35
5698 6124 2.028130 TGCTGGACAACCAAATTTCGT 58.972 42.857 0.00 0.00 46.32 3.85
5699 6125 2.791383 TGCTGGACAACCAAATTTCG 57.209 45.000 0.00 0.00 46.32 3.46
5700 6126 4.058721 ACTTGCTGGACAACCAAATTTC 57.941 40.909 0.00 0.00 46.32 2.17
5704 6130 2.093764 CCAAACTTGCTGGACAACCAAA 60.094 45.455 0.00 0.00 46.32 3.28
5709 6135 0.749818 TCGCCAAACTTGCTGGACAA 60.750 50.000 0.00 0.00 35.85 3.18
5800 6241 2.628178 GGGAAGGTTGTCAAAAAGAGGG 59.372 50.000 0.00 0.00 0.00 4.30
5837 6278 1.540267 TACACCCAAAAGCCCATTCG 58.460 50.000 0.00 0.00 0.00 3.34
5841 6282 1.816183 CGTCTTACACCCAAAAGCCCA 60.816 52.381 0.00 0.00 0.00 5.36
5881 6354 5.341196 CGAACAATTAAGGCCTTAACAAACG 59.659 40.000 34.78 28.59 37.80 3.60
5882 6355 6.210796 ACGAACAATTAAGGCCTTAACAAAC 58.789 36.000 34.78 23.34 37.80 2.93
5883 6356 6.394025 ACGAACAATTAAGGCCTTAACAAA 57.606 33.333 34.78 19.23 37.80 2.83
5884 6357 7.690952 ATACGAACAATTAAGGCCTTAACAA 57.309 32.000 34.78 19.59 37.80 2.83
5885 6358 7.690952 AATACGAACAATTAAGGCCTTAACA 57.309 32.000 34.78 18.62 37.80 2.41
5906 6379 7.848128 AGGACTAAAATCTCGGACTTCAAATA 58.152 34.615 0.00 0.00 0.00 1.40
5913 6386 5.740290 TTGAAGGACTAAAATCTCGGACT 57.260 39.130 0.00 0.00 0.00 3.85
5924 6397 6.110707 CGCCTAAAGGTATTTGAAGGACTAA 58.889 40.000 0.00 0.00 37.57 2.24
5945 6418 0.742505 GTTAATTAGTTGCCCCCGCC 59.257 55.000 0.00 0.00 0.00 6.13
5946 6419 0.379316 CGTTAATTAGTTGCCCCCGC 59.621 55.000 0.00 0.00 0.00 6.13
5947 6420 1.937899 CTCGTTAATTAGTTGCCCCCG 59.062 52.381 0.00 0.00 0.00 5.73
5948 6421 1.674441 GCTCGTTAATTAGTTGCCCCC 59.326 52.381 0.00 0.00 0.00 5.40
5949 6422 1.329599 CGCTCGTTAATTAGTTGCCCC 59.670 52.381 0.00 0.00 0.00 5.80
5950 6423 1.267882 GCGCTCGTTAATTAGTTGCCC 60.268 52.381 0.00 0.00 0.00 5.36
5951 6424 1.664151 AGCGCTCGTTAATTAGTTGCC 59.336 47.619 2.64 0.00 0.00 4.52
5952 6425 2.285660 GGAGCGCTCGTTAATTAGTTGC 60.286 50.000 29.81 8.45 0.00 4.17
5953 6426 3.187700 AGGAGCGCTCGTTAATTAGTTG 58.812 45.455 29.81 0.00 0.00 3.16
5954 6427 3.521947 AGGAGCGCTCGTTAATTAGTT 57.478 42.857 29.81 3.47 0.00 2.24
5955 6428 3.445857 GAAGGAGCGCTCGTTAATTAGT 58.554 45.455 36.96 19.55 37.75 2.24
5956 6429 2.468040 CGAAGGAGCGCTCGTTAATTAG 59.532 50.000 36.96 23.67 37.75 1.73
5957 6430 2.456989 CGAAGGAGCGCTCGTTAATTA 58.543 47.619 36.96 0.00 37.75 1.40
5958 6431 1.278238 CGAAGGAGCGCTCGTTAATT 58.722 50.000 36.96 21.28 37.75 1.40
5959 6432 2.959275 CGAAGGAGCGCTCGTTAAT 58.041 52.632 36.96 21.62 37.75 1.40
5960 6433 4.470876 CGAAGGAGCGCTCGTTAA 57.529 55.556 36.96 0.00 37.75 2.01
5973 6446 2.815647 GTTGCGAGGCTCCCGAAG 60.816 66.667 9.32 0.00 0.00 3.79
5974 6447 4.735132 CGTTGCGAGGCTCCCGAA 62.735 66.667 9.32 0.00 0.00 4.30
5976 6449 4.514577 ATCGTTGCGAGGCTCCCG 62.515 66.667 9.32 6.56 39.91 5.14
5977 6450 2.586357 GATCGTTGCGAGGCTCCC 60.586 66.667 9.32 0.00 39.91 4.30
5978 6451 1.880340 CTGATCGTTGCGAGGCTCC 60.880 63.158 9.32 2.37 39.91 4.70
5979 6452 2.520904 GCTGATCGTTGCGAGGCTC 61.521 63.158 3.87 3.87 39.91 4.70
5980 6453 2.510238 GCTGATCGTTGCGAGGCT 60.510 61.111 0.00 0.00 39.91 4.58
5981 6454 2.815211 TGCTGATCGTTGCGAGGC 60.815 61.111 0.00 2.90 39.91 4.70
5982 6455 2.456119 GGTGCTGATCGTTGCGAGG 61.456 63.158 0.00 0.00 39.91 4.63
5983 6456 1.737735 TGGTGCTGATCGTTGCGAG 60.738 57.895 0.00 0.00 39.91 5.03
5984 6457 2.027073 GTGGTGCTGATCGTTGCGA 61.027 57.895 0.00 0.00 41.13 5.10
5985 6458 1.568612 AAGTGGTGCTGATCGTTGCG 61.569 55.000 0.00 0.00 0.00 4.85
5986 6459 0.110056 CAAGTGGTGCTGATCGTTGC 60.110 55.000 0.00 0.00 0.00 4.17
5987 6460 0.518636 CCAAGTGGTGCTGATCGTTG 59.481 55.000 0.00 0.00 0.00 4.10
5988 6461 1.237285 GCCAAGTGGTGCTGATCGTT 61.237 55.000 0.00 0.00 37.57 3.85
5989 6462 1.672356 GCCAAGTGGTGCTGATCGT 60.672 57.895 0.00 0.00 37.57 3.73
5990 6463 2.743752 CGCCAAGTGGTGCTGATCG 61.744 63.158 0.00 0.00 39.04 3.69
5991 6464 3.181367 CGCCAAGTGGTGCTGATC 58.819 61.111 0.00 0.00 39.04 2.92
5998 6471 2.591715 GTGAGTGCGCCAAGTGGT 60.592 61.111 4.18 0.00 37.57 4.16
5999 6472 2.186160 TTGTGAGTGCGCCAAGTGG 61.186 57.895 4.18 0.00 38.53 4.00
6000 6473 1.009675 GTTGTGAGTGCGCCAAGTG 60.010 57.895 4.18 0.00 0.00 3.16
6001 6474 2.186826 GGTTGTGAGTGCGCCAAGT 61.187 57.895 4.18 0.00 0.00 3.16
6002 6475 1.518056 ATGGTTGTGAGTGCGCCAAG 61.518 55.000 4.18 0.00 32.54 3.61
6003 6476 1.106351 AATGGTTGTGAGTGCGCCAA 61.106 50.000 4.18 0.00 32.54 4.52
6004 6477 1.514678 GAATGGTTGTGAGTGCGCCA 61.515 55.000 4.18 0.00 0.00 5.69
6005 6478 1.210155 GAATGGTTGTGAGTGCGCC 59.790 57.895 4.18 0.00 0.00 6.53
6006 6479 1.154413 CGAATGGTTGTGAGTGCGC 60.154 57.895 0.00 0.00 0.00 6.09
6007 6480 0.163788 GACGAATGGTTGTGAGTGCG 59.836 55.000 0.00 0.00 0.00 5.34
6008 6481 1.069906 GTGACGAATGGTTGTGAGTGC 60.070 52.381 0.00 0.00 0.00 4.40
6009 6482 1.192312 CGTGACGAATGGTTGTGAGTG 59.808 52.381 0.00 0.00 0.00 3.51
6010 6483 1.202486 ACGTGACGAATGGTTGTGAGT 60.202 47.619 13.70 0.00 0.00 3.41
6011 6484 1.192312 CACGTGACGAATGGTTGTGAG 59.808 52.381 13.70 0.00 31.90 3.51
6012 6485 1.213491 CACGTGACGAATGGTTGTGA 58.787 50.000 13.70 0.00 31.90 3.58
6013 6486 0.934496 ACACGTGACGAATGGTTGTG 59.066 50.000 25.01 0.00 34.61 3.33
6014 6487 1.214367 GACACGTGACGAATGGTTGT 58.786 50.000 25.01 3.80 0.00 3.32
6015 6488 0.160813 CGACACGTGACGAATGGTTG 59.839 55.000 31.37 0.00 35.37 3.77
6016 6489 1.554042 GCGACACGTGACGAATGGTT 61.554 55.000 37.05 6.92 35.37 3.67
6017 6490 2.019951 GCGACACGTGACGAATGGT 61.020 57.895 37.05 7.70 35.37 3.55
6018 6491 2.769617 GCGACACGTGACGAATGG 59.230 61.111 37.05 13.87 35.37 3.16
6019 6492 2.386491 CGCGACACGTGACGAATG 59.614 61.111 37.05 23.58 39.94 2.67
6020 6493 3.467119 GCGCGACACGTGACGAAT 61.467 61.111 37.05 10.08 46.11 3.34
6021 6494 4.617486 AGCGCGACACGTGACGAA 62.617 61.111 37.05 0.00 46.11 3.85
6024 6497 3.461982 CAGAGCGCGACACGTGAC 61.462 66.667 25.01 16.07 46.11 3.67
6025 6498 4.700365 CCAGAGCGCGACACGTGA 62.700 66.667 25.01 0.00 46.11 4.35
6036 6509 2.167861 CGTAGAAAGCGCCCAGAGC 61.168 63.158 2.29 0.00 38.52 4.09
6037 6510 1.519455 CCGTAGAAAGCGCCCAGAG 60.519 63.158 2.29 0.00 0.00 3.35
6038 6511 2.577059 CCGTAGAAAGCGCCCAGA 59.423 61.111 2.29 0.00 0.00 3.86
6039 6512 2.511600 CCCGTAGAAAGCGCCCAG 60.512 66.667 2.29 0.00 0.00 4.45
6040 6513 2.400269 AAACCCGTAGAAAGCGCCCA 62.400 55.000 2.29 0.00 0.00 5.36
6041 6514 1.239296 AAAACCCGTAGAAAGCGCCC 61.239 55.000 2.29 0.00 0.00 6.13
6042 6515 0.594602 AAAAACCCGTAGAAAGCGCC 59.405 50.000 2.29 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.