Multiple sequence alignment - TraesCS5B01G176000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G176000 chr5B 100.000 7206 0 0 1 7206 321978574 321971369 0.000000e+00 13308.0
1 TraesCS5B01G176000 chr5B 97.283 184 4 1 3464 3647 654755914 654755732 1.950000e-80 311.0
2 TraesCS5B01G176000 chr5D 93.262 3369 126 32 3870 7159 284113127 284109781 0.000000e+00 4870.0
3 TraesCS5B01G176000 chr5D 93.311 1495 54 26 1963 3437 284114781 284113313 0.000000e+00 2165.0
4 TraesCS5B01G176000 chr5D 89.889 1078 46 27 258 1301 284116502 284115454 0.000000e+00 1328.0
5 TraesCS5B01G176000 chr5D 90.484 641 35 7 1294 1909 284115423 284114784 0.000000e+00 822.0
6 TraesCS5B01G176000 chr5D 97.143 175 5 0 3644 3818 284113305 284113131 5.470000e-76 296.0
7 TraesCS5B01G176000 chr5D 85.768 267 23 6 1 259 284117055 284116796 1.190000e-67 268.0
8 TraesCS5B01G176000 chr5A 94.052 2707 99 22 4477 7151 375844366 375841690 0.000000e+00 4050.0
9 TraesCS5B01G176000 chr5A 93.351 1504 60 18 1977 3458 375846986 375845501 0.000000e+00 2187.0
10 TraesCS5B01G176000 chr5A 88.386 1791 104 44 182 1913 375848731 375846986 0.000000e+00 2060.0
11 TraesCS5B01G176000 chr5A 88.342 386 23 10 4090 4475 375844836 375844473 1.840000e-120 444.0
12 TraesCS5B01G176000 chr5A 95.804 143 6 0 3676 3818 375845442 375845300 1.560000e-56 231.0
13 TraesCS5B01G176000 chr5A 94.958 119 5 1 3870 3987 375845296 375845178 1.230000e-42 185.0
14 TraesCS5B01G176000 chr1A 98.870 177 2 0 3464 3640 515551303 515551479 4.200000e-82 316.0
15 TraesCS5B01G176000 chr7B 98.324 179 3 0 3464 3642 55865138 55864960 1.510000e-81 315.0
16 TraesCS5B01G176000 chr7B 96.809 188 4 2 3464 3651 198551243 198551058 5.430000e-81 313.0
17 TraesCS5B01G176000 chr7B 97.802 182 2 2 3464 3644 699827906 699828086 5.430000e-81 313.0
18 TraesCS5B01G176000 chr7B 97.283 184 3 2 3464 3646 700410911 700410729 1.950000e-80 311.0
19 TraesCS5B01G176000 chr4A 98.315 178 3 0 3464 3641 114586287 114586464 5.430000e-81 313.0
20 TraesCS5B01G176000 chr3B 98.324 179 2 1 3464 3642 473396918 473397095 5.430000e-81 313.0
21 TraesCS5B01G176000 chr7A 96.316 190 5 2 3452 3640 438151659 438151471 1.950000e-80 311.0
22 TraesCS5B01G176000 chr6A 78.512 121 18 5 162 276 6024703 6024585 1.000000e-08 73.1
23 TraesCS5B01G176000 chr2D 86.441 59 7 1 233 290 56258458 56258400 6.040000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G176000 chr5B 321971369 321978574 7205 True 13308.000000 13308 100.000000 1 7206 1 chr5B.!!$R1 7205
1 TraesCS5B01G176000 chr5D 284109781 284117055 7274 True 1624.833333 4870 91.642833 1 7159 6 chr5D.!!$R1 7158
2 TraesCS5B01G176000 chr5A 375841690 375848731 7041 True 1526.166667 4050 92.482167 182 7151 6 chr5A.!!$R1 6969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 569 0.035725 TCGAGAGACTGAGCCGGTAA 60.036 55.0 1.9 0.0 33.31 2.85 F
1444 1842 0.169009 CGCTTCCTAGTTGGCTTTGC 59.831 55.0 0.0 0.0 35.26 3.68 F
2499 2934 0.179062 CACCAGCTCTATGCCCACTC 60.179 60.0 0.0 0.0 44.23 3.51 F
3473 3927 0.675522 TAGTGGTAAAGCCTTGGCGC 60.676 55.0 0.0 0.0 38.35 6.53 F
3517 3971 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.0 0.0 0.0 0.00 2.69 F
5068 5945 0.038892 CATTGCTGCACAACCAGTCC 60.039 55.0 0.0 0.0 42.27 3.85 F
5613 6490 0.108424 ATCGAACACCTCTGCTCTGC 60.108 55.0 0.0 0.0 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1559 1963 0.035152 TAGAACACATGGCTGGGCAG 60.035 55.000 0.0 0.0 0.00 4.85 R
2761 3204 1.006832 AGATTTCCGTTCGCAATCCG 58.993 50.000 9.9 0.0 38.61 4.18 R
3487 3941 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.0 0.0 44.78 4.85 R
4882 5759 0.036590 TGTCAATGCCACTGCTGCTA 59.963 50.000 0.0 0.0 38.71 3.49 R
5512 6389 0.040157 CAGTGGTGGCATTTGTGACG 60.040 55.000 0.0 0.0 0.00 4.35 R
5914 6791 1.611851 CTCACCACCCCTCAGCTCT 60.612 63.158 0.0 0.0 0.00 4.09 R
7182 8092 1.338484 GGTTTGTACTCCCTCGGTTCC 60.338 57.143 0.0 0.0 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.739972 GTGTTCTCATTATTACTTGGTTTCCAT 58.260 33.333 0.00 0.00 31.53 3.41
28 29 8.956426 GTTCTCATTATTACTTGGTTTCCATGA 58.044 33.333 0.00 0.00 33.58 3.07
141 142 7.525688 TTTTGAAAAACACAATATTGACGCA 57.474 28.000 22.16 7.03 0.00 5.24
167 169 1.635487 ACCCCTATGAATGCACACAGT 59.365 47.619 0.00 0.00 0.00 3.55
168 170 2.843730 ACCCCTATGAATGCACACAGTA 59.156 45.455 0.00 0.00 0.00 2.74
169 171 3.459598 ACCCCTATGAATGCACACAGTAT 59.540 43.478 0.00 0.00 0.00 2.12
170 172 4.658435 ACCCCTATGAATGCACACAGTATA 59.342 41.667 0.00 0.00 0.00 1.47
171 173 5.221722 ACCCCTATGAATGCACACAGTATAG 60.222 44.000 0.00 0.00 0.00 1.31
172 174 5.012046 CCCCTATGAATGCACACAGTATAGA 59.988 44.000 0.00 0.00 0.00 1.98
174 176 6.592994 CCCTATGAATGCACACAGTATAGATG 59.407 42.308 0.00 0.00 0.00 2.90
175 177 5.936686 ATGAATGCACACAGTATAGATGC 57.063 39.130 0.00 0.00 36.81 3.91
240 249 5.189736 ACACATACACATCCACCTCTACAAT 59.810 40.000 0.00 0.00 0.00 2.71
265 569 0.035725 TCGAGAGACTGAGCCGGTAA 60.036 55.000 1.90 0.00 33.31 2.85
335 641 2.297597 CCACACCGCCAAAGGATAAAAA 59.702 45.455 0.00 0.00 34.73 1.94
345 651 7.148590 CCGCCAAAGGATAAAAAGAGATTTTTG 60.149 37.037 8.55 0.00 41.42 2.44
352 661 9.899226 AGGATAAAAAGAGATTTTTGTTCTTCG 57.101 29.630 8.55 0.00 41.42 3.79
466 800 7.425606 CAAGCTAGGCTAGTTTTCAAGAAAAA 58.574 34.615 19.42 0.00 38.84 1.94
480 814 5.460646 TCAAGAAAAACGATGATCCAAAGC 58.539 37.500 0.00 0.00 0.00 3.51
481 815 5.241506 TCAAGAAAAACGATGATCCAAAGCT 59.758 36.000 0.00 0.00 0.00 3.74
487 821 5.339008 AACGATGATCCAAAGCTAGTACA 57.661 39.130 0.00 0.00 0.00 2.90
598 932 0.885196 GGACGGTTTGCATAAAGGCA 59.115 50.000 0.00 0.00 43.19 4.75
612 946 8.009622 TGCATAAAGGCATTCAGATGATTTAA 57.990 30.769 5.17 0.00 39.25 1.52
641 975 2.171725 GCACCCGCCGCTAAAGTAG 61.172 63.158 0.00 0.00 0.00 2.57
651 985 4.201599 CGCCGCTAAAGTAGTCTTCTTTTC 60.202 45.833 9.44 2.92 36.65 2.29
668 1003 3.906720 TTTCCATAAAGACCCTCGAGG 57.093 47.619 25.36 25.36 43.78 4.63
699 1034 0.249911 GCCGACGGATAAGGAGCAAT 60.250 55.000 20.50 0.00 0.00 3.56
700 1035 1.502231 CCGACGGATAAGGAGCAATG 58.498 55.000 8.64 0.00 0.00 2.82
701 1036 1.502231 CGACGGATAAGGAGCAATGG 58.498 55.000 0.00 0.00 0.00 3.16
702 1037 1.202533 CGACGGATAAGGAGCAATGGT 60.203 52.381 0.00 0.00 0.00 3.55
703 1038 2.484889 GACGGATAAGGAGCAATGGTC 58.515 52.381 3.49 3.49 0.00 4.02
704 1039 2.103263 GACGGATAAGGAGCAATGGTCT 59.897 50.000 12.42 0.00 0.00 3.85
705 1040 2.158900 ACGGATAAGGAGCAATGGTCTG 60.159 50.000 12.42 0.00 0.00 3.51
706 1041 2.158900 CGGATAAGGAGCAATGGTCTGT 60.159 50.000 12.42 3.33 0.00 3.41
707 1042 3.209410 GGATAAGGAGCAATGGTCTGTG 58.791 50.000 12.42 0.00 0.00 3.66
708 1043 2.787473 TAAGGAGCAATGGTCTGTGG 57.213 50.000 12.42 0.00 0.00 4.17
709 1044 1.067295 AAGGAGCAATGGTCTGTGGA 58.933 50.000 12.42 0.00 0.00 4.02
710 1045 0.617413 AGGAGCAATGGTCTGTGGAG 59.383 55.000 12.42 0.00 0.00 3.86
711 1046 0.393537 GGAGCAATGGTCTGTGGAGG 60.394 60.000 12.42 0.00 0.00 4.30
712 1047 0.393537 GAGCAATGGTCTGTGGAGGG 60.394 60.000 5.04 0.00 0.00 4.30
754 1089 4.877282 TGTTTTCCAAGGGCTTAAAATCG 58.123 39.130 0.00 0.00 0.00 3.34
762 1097 2.086094 GGGCTTAAAATCGAAACGGGA 58.914 47.619 0.00 0.00 0.00 5.14
823 1158 3.953542 TCACTAGGAGATGGACTGCTA 57.046 47.619 0.00 0.00 45.22 3.49
898 1233 2.496070 TCGGTCCATGGAGTACAAGAAG 59.504 50.000 16.81 0.00 0.00 2.85
918 1253 1.152694 ACAAGGCAGCCAAAGCAGA 60.153 52.632 15.80 0.00 43.56 4.26
932 1267 2.162716 GCAGAGGCGTTTACACCAG 58.837 57.895 0.00 0.00 0.00 4.00
937 1272 2.622962 GGCGTTTACACCAGCACCC 61.623 63.158 0.00 0.00 0.00 4.61
1098 1442 1.199615 CCTCCTTCTTCTCCTCCCAC 58.800 60.000 0.00 0.00 0.00 4.61
1161 1509 2.015726 TCTCCCTCTCCCTCTCCCC 61.016 68.421 0.00 0.00 0.00 4.81
1164 1512 2.652113 CCCTCTCCCTCTCCCCCTT 61.652 68.421 0.00 0.00 0.00 3.95
1167 1515 0.692756 CTCTCCCTCTCCCCCTTTCC 60.693 65.000 0.00 0.00 0.00 3.13
1168 1516 1.162951 TCTCCCTCTCCCCCTTTCCT 61.163 60.000 0.00 0.00 0.00 3.36
1169 1517 0.253394 CTCCCTCTCCCCCTTTCCTT 60.253 60.000 0.00 0.00 0.00 3.36
1170 1518 0.253207 TCCCTCTCCCCCTTTCCTTC 60.253 60.000 0.00 0.00 0.00 3.46
1171 1519 0.253394 CCCTCTCCCCCTTTCCTTCT 60.253 60.000 0.00 0.00 0.00 2.85
1172 1520 1.208706 CCTCTCCCCCTTTCCTTCTC 58.791 60.000 0.00 0.00 0.00 2.87
1173 1521 1.274126 CCTCTCCCCCTTTCCTTCTCT 60.274 57.143 0.00 0.00 0.00 3.10
1194 1542 7.551585 TCTCTACATTTCATCAGAGAAACTCC 58.448 38.462 0.00 0.00 40.33 3.85
1260 1608 1.398390 GCCATCTCATCGGTTTGTGAC 59.602 52.381 0.00 0.00 0.00 3.67
1263 1611 1.778334 TCTCATCGGTTTGTGACGTG 58.222 50.000 0.00 0.00 0.00 4.49
1378 1776 1.361668 CGATTTCTGGTGTCCTGCGG 61.362 60.000 0.00 0.00 0.00 5.69
1404 1802 1.555075 TCTCAAATCTCAACGGGAGGG 59.445 52.381 6.53 0.00 44.19 4.30
1435 1833 2.014068 GCAAATGCCTCGCTTCCTAGT 61.014 52.381 0.00 0.00 34.31 2.57
1439 1837 1.815840 GCCTCGCTTCCTAGTTGGC 60.816 63.158 0.00 0.00 35.26 4.52
1442 1840 1.339151 CCTCGCTTCCTAGTTGGCTTT 60.339 52.381 0.00 0.00 35.26 3.51
1444 1842 0.169009 CGCTTCCTAGTTGGCTTTGC 59.831 55.000 0.00 0.00 35.26 3.68
1462 1862 5.821995 GCTTTGCTGATCTTCTCCTAGAAAT 59.178 40.000 0.00 0.00 33.19 2.17
1470 1870 9.835389 CTGATCTTCTCCTAGAAATTTTCTGAT 57.165 33.333 19.60 12.12 40.94 2.90
1473 1873 9.835389 ATCTTCTCCTAGAAATTTTCTGATGAG 57.165 33.333 19.60 19.01 40.94 2.90
1549 1953 6.151648 TGTTGCATTTTCTTCTCCTATTCCAG 59.848 38.462 0.00 0.00 0.00 3.86
1559 1963 0.249911 CCTATTCCAGCAGTACCGCC 60.250 60.000 0.00 0.00 0.00 6.13
1693 2097 0.393820 GTACCGTTCCTGTGGTCCAA 59.606 55.000 0.00 0.00 39.70 3.53
1699 2103 3.343617 CGTTCCTGTGGTCCAATTACAT 58.656 45.455 0.00 0.00 0.00 2.29
1725 2130 5.523916 CCCACCAAAAATAGATCTAGACGTG 59.476 44.000 8.70 8.02 0.00 4.49
1735 2140 3.258372 AGATCTAGACGTGCCACTGAAAA 59.742 43.478 0.00 0.00 0.00 2.29
1831 2259 2.906897 AACCCGCACTGCACAAGG 60.907 61.111 1.11 0.00 0.00 3.61
1859 2287 3.065371 GGACCATATTTTGTCTTCGCTGG 59.935 47.826 0.00 0.00 0.00 4.85
1909 2337 6.708054 TCTCTCTTCTTCCAACATGTTCTTTC 59.292 38.462 8.48 0.00 0.00 2.62
1912 2340 6.595682 TCTTCTTCCAACATGTTCTTTCTCT 58.404 36.000 8.48 0.00 0.00 3.10
1913 2341 6.708054 TCTTCTTCCAACATGTTCTTTCTCTC 59.292 38.462 8.48 0.00 0.00 3.20
1914 2342 6.179906 TCTTCCAACATGTTCTTTCTCTCT 57.820 37.500 8.48 0.00 0.00 3.10
1915 2343 6.226787 TCTTCCAACATGTTCTTTCTCTCTC 58.773 40.000 8.48 0.00 0.00 3.20
1916 2344 5.815233 TCCAACATGTTCTTTCTCTCTCT 57.185 39.130 8.48 0.00 0.00 3.10
1917 2345 5.788450 TCCAACATGTTCTTTCTCTCTCTC 58.212 41.667 8.48 0.00 0.00 3.20
1918 2346 5.541868 TCCAACATGTTCTTTCTCTCTCTCT 59.458 40.000 8.48 0.00 0.00 3.10
1919 2347 5.868801 CCAACATGTTCTTTCTCTCTCTCTC 59.131 44.000 8.48 0.00 0.00 3.20
1920 2348 6.295236 CCAACATGTTCTTTCTCTCTCTCTCT 60.295 42.308 8.48 0.00 0.00 3.10
1921 2349 6.515272 ACATGTTCTTTCTCTCTCTCTCTC 57.485 41.667 0.00 0.00 0.00 3.20
1922 2350 6.248433 ACATGTTCTTTCTCTCTCTCTCTCT 58.752 40.000 0.00 0.00 0.00 3.10
1923 2351 6.375455 ACATGTTCTTTCTCTCTCTCTCTCTC 59.625 42.308 0.00 0.00 0.00 3.20
1924 2352 6.126863 TGTTCTTTCTCTCTCTCTCTCTCT 57.873 41.667 0.00 0.00 0.00 3.10
1925 2353 6.173339 TGTTCTTTCTCTCTCTCTCTCTCTC 58.827 44.000 0.00 0.00 0.00 3.20
1926 2354 6.013379 TGTTCTTTCTCTCTCTCTCTCTCTCT 60.013 42.308 0.00 0.00 0.00 3.10
1927 2355 6.227298 TCTTTCTCTCTCTCTCTCTCTCTC 57.773 45.833 0.00 0.00 0.00 3.20
1928 2356 5.960811 TCTTTCTCTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1929 2357 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
1930 2358 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
1931 2359 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1932 2360 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1933 2361 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1934 2362 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1935 2363 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1936 2364 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1937 2365 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1938 2366 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1939 2367 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1940 2368 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1941 2369 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1942 2370 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1943 2371 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1944 2372 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1945 2373 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1946 2374 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1947 2375 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1948 2376 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1949 2377 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1950 2378 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1951 2379 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1952 2380 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1953 2381 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1954 2382 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1955 2383 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1956 2384 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1957 2385 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1958 2386 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1959 2387 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1960 2388 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1961 2389 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1962 2390 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1963 2391 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1964 2392 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1965 2393 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2092 2520 6.880484 TGTTTCTCCAGTAACTTGACTGTTA 58.120 36.000 3.11 0.00 44.54 2.41
2136 2564 9.708222 GCATTGTACTTGTGTTTAGATAAGATG 57.292 33.333 0.00 0.00 0.00 2.90
2140 2568 9.563898 TGTACTTGTGTTTAGATAAGATGTACG 57.436 33.333 0.00 0.00 0.00 3.67
2141 2569 9.778993 GTACTTGTGTTTAGATAAGATGTACGA 57.221 33.333 0.00 0.00 0.00 3.43
2263 2694 9.905713 ATAGCTACATAGAAATTGAGGTGAAAA 57.094 29.630 0.00 0.00 0.00 2.29
2268 2699 7.147976 ACATAGAAATTGAGGTGAAAAACAGC 58.852 34.615 0.00 0.00 46.00 4.40
2318 2749 5.947228 TTATCTTTGCTCCAACAGTCAAG 57.053 39.130 0.00 0.00 0.00 3.02
2322 2753 2.245159 TGCTCCAACAGTCAAGAGTG 57.755 50.000 3.43 3.43 37.75 3.51
2334 2765 7.986085 ACAGTCAAGAGTGTTGCTAAAATAT 57.014 32.000 4.75 0.00 41.91 1.28
2430 2865 1.739707 GCAGACAGCAGTGATGGAGAG 60.740 57.143 13.84 0.86 44.79 3.20
2499 2934 0.179062 CACCAGCTCTATGCCCACTC 60.179 60.000 0.00 0.00 44.23 3.51
2557 2998 3.583882 ATTTGGACCACCGGCCCTG 62.584 63.158 0.00 0.00 39.42 4.45
2761 3204 5.069518 AGGAGAACTTAGGGTAGGAGATC 57.930 47.826 0.00 0.00 0.00 2.75
2787 3230 2.930040 TGCGAACGGAAATCTTGATCTC 59.070 45.455 0.00 0.00 0.00 2.75
2864 3307 4.771114 AAATCGTGATATTGAGGTGGGA 57.229 40.909 0.00 0.00 0.00 4.37
2897 3340 8.375506 TGGAATATCACCGAGATAAGCTATTTT 58.624 33.333 0.00 0.00 42.27 1.82
2908 3351 8.125448 CGAGATAAGCTATTTTTCTCCTTTTGG 58.875 37.037 0.00 0.00 39.38 3.28
2915 3359 5.565455 ATTTTTCTCCTTTTGGCATGGAA 57.435 34.783 0.00 0.00 40.12 3.53
3018 3462 4.944930 TCTAGACTTCTGAGGTTAGCTGTC 59.055 45.833 0.00 0.00 0.00 3.51
3037 3481 6.715718 AGCTGTCGCTATATCTAGAACCTTAA 59.284 38.462 0.00 0.00 46.79 1.85
3038 3482 7.394923 AGCTGTCGCTATATCTAGAACCTTAAT 59.605 37.037 0.00 0.00 46.79 1.40
3039 3483 7.486551 GCTGTCGCTATATCTAGAACCTTAATG 59.513 40.741 0.00 0.00 0.00 1.90
3040 3484 8.405418 TGTCGCTATATCTAGAACCTTAATGT 57.595 34.615 0.00 0.00 0.00 2.71
3041 3485 8.512956 TGTCGCTATATCTAGAACCTTAATGTC 58.487 37.037 0.00 0.00 0.00 3.06
3043 3487 9.298250 TCGCTATATCTAGAACCTTAATGTCTT 57.702 33.333 0.00 0.00 0.00 3.01
3051 3496 8.877195 TCTAGAACCTTAATGTCTTACTTTGGT 58.123 33.333 0.00 0.00 0.00 3.67
3274 3719 5.565637 CGATGAACAATCATATCGTCTCCCT 60.566 44.000 0.00 0.00 46.30 4.20
3316 3762 3.079578 CTGATGGGCTAATGGTGCATAG 58.920 50.000 0.00 0.00 0.00 2.23
3381 3835 3.966979 TGACAATCAACAGGGCATATGT 58.033 40.909 4.29 0.00 0.00 2.29
3382 3836 3.947196 TGACAATCAACAGGGCATATGTC 59.053 43.478 4.29 0.58 37.15 3.06
3383 3837 2.945008 ACAATCAACAGGGCATATGTCG 59.055 45.455 4.29 0.00 0.00 4.35
3384 3838 2.945008 CAATCAACAGGGCATATGTCGT 59.055 45.455 4.29 0.00 0.00 4.34
3385 3839 2.779755 TCAACAGGGCATATGTCGTT 57.220 45.000 4.29 0.00 0.00 3.85
3394 3848 4.098349 AGGGCATATGTCGTTTCGTTACTA 59.902 41.667 4.29 0.00 0.00 1.82
3410 3864 7.428282 TCGTTACTATGCACATTTCTCAAAA 57.572 32.000 0.00 0.00 0.00 2.44
3426 3880 5.601582 TCTCAAAAACTAACGAATAACGCG 58.398 37.500 3.53 3.53 46.94 6.01
3429 3883 5.118357 TCAAAAACTAACGAATAACGCGCTA 59.882 36.000 5.73 0.00 46.94 4.26
3433 3887 6.810888 AACTAACGAATAACGCGCTATTTA 57.189 33.333 15.33 2.87 46.94 1.40
3465 3919 9.211485 TGTAACAGAAACTATTAGTGGTAAAGC 57.789 33.333 0.00 0.00 0.00 3.51
3466 3920 7.683437 AACAGAAACTATTAGTGGTAAAGCC 57.317 36.000 0.00 0.00 37.90 4.35
3467 3921 7.017319 ACAGAAACTATTAGTGGTAAAGCCT 57.983 36.000 0.00 0.00 38.35 4.58
3468 3922 7.459234 ACAGAAACTATTAGTGGTAAAGCCTT 58.541 34.615 0.00 0.00 38.35 4.35
3469 3923 7.390718 ACAGAAACTATTAGTGGTAAAGCCTTG 59.609 37.037 0.00 0.00 38.35 3.61
3470 3924 6.884836 AGAAACTATTAGTGGTAAAGCCTTGG 59.115 38.462 0.00 0.00 38.35 3.61
3471 3925 4.524053 ACTATTAGTGGTAAAGCCTTGGC 58.476 43.478 2.97 2.97 38.35 4.52
3472 3926 1.816074 TTAGTGGTAAAGCCTTGGCG 58.184 50.000 5.95 0.00 38.35 5.69
3473 3927 0.675522 TAGTGGTAAAGCCTTGGCGC 60.676 55.000 0.00 0.00 38.35 6.53
3474 3928 2.114199 TGGTAAAGCCTTGGCGCA 59.886 55.556 10.83 0.00 38.35 6.09
3475 3929 1.971167 TGGTAAAGCCTTGGCGCAG 60.971 57.895 10.83 0.00 38.35 5.18
3476 3930 1.971695 GGTAAAGCCTTGGCGCAGT 60.972 57.895 10.83 0.00 0.00 4.40
3477 3931 1.210155 GTAAAGCCTTGGCGCAGTG 59.790 57.895 10.83 0.00 0.00 3.66
3478 3932 1.971167 TAAAGCCTTGGCGCAGTGG 60.971 57.895 10.83 8.70 0.00 4.00
3479 3933 2.690653 TAAAGCCTTGGCGCAGTGGT 62.691 55.000 10.83 0.00 0.00 4.16
3480 3934 2.690653 AAAGCCTTGGCGCAGTGGTA 62.691 55.000 10.83 0.00 0.00 3.25
3481 3935 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
3482 3936 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
3483 3937 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
3484 3938 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
3485 3939 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
3486 3940 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
3491 3945 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
3492 3946 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
3493 3947 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
3494 3948 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
3495 3949 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
3496 3950 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
3497 3951 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
3498 3952 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
3499 3953 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
3500 3954 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
3501 3955 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
3502 3956 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
3503 3957 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
3504 3958 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
3505 3959 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
3515 3969 4.617875 CCATGAGGTCACGGGTTC 57.382 61.111 0.00 0.00 0.00 3.62
3516 3970 1.676968 CCATGAGGTCACGGGTTCA 59.323 57.895 0.00 0.00 0.00 3.18
3517 3971 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.000 0.00 0.00 0.00 2.69
3518 3972 1.442769 CATGAGGTCACGGGTTCAAG 58.557 55.000 0.00 0.00 0.00 3.02
3519 3973 1.056660 ATGAGGTCACGGGTTCAAGT 58.943 50.000 0.00 0.00 0.00 3.16
3520 3974 0.391597 TGAGGTCACGGGTTCAAGTC 59.608 55.000 0.00 0.00 0.00 3.01
3521 3975 0.320508 GAGGTCACGGGTTCAAGTCC 60.321 60.000 0.00 0.00 0.00 3.85
3522 3976 0.763223 AGGTCACGGGTTCAAGTCCT 60.763 55.000 0.00 0.00 0.00 3.85
3523 3977 0.602905 GGTCACGGGTTCAAGTCCTG 60.603 60.000 0.00 0.00 37.36 3.86
3524 3978 0.602905 GTCACGGGTTCAAGTCCTGG 60.603 60.000 0.00 0.00 35.79 4.45
3525 3979 0.761323 TCACGGGTTCAAGTCCTGGA 60.761 55.000 0.00 0.00 35.79 3.86
3526 3980 0.107831 CACGGGTTCAAGTCCTGGAA 59.892 55.000 0.00 0.00 35.79 3.53
3527 3981 0.841289 ACGGGTTCAAGTCCTGGAAA 59.159 50.000 0.00 0.00 35.79 3.13
3528 3982 1.235724 CGGGTTCAAGTCCTGGAAAC 58.764 55.000 0.00 0.00 0.00 2.78
3529 3983 1.476110 CGGGTTCAAGTCCTGGAAACA 60.476 52.381 0.00 0.00 32.36 2.83
3543 3997 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
3544 3998 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
3545 3999 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
3546 4000 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
3547 4001 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
3548 4002 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
3549 4003 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
3550 4004 4.532521 ACAGCCTCTTACAGAAATGTAGGT 59.467 41.667 0.00 0.00 0.00 3.08
3551 4005 5.720041 ACAGCCTCTTACAGAAATGTAGGTA 59.280 40.000 0.00 0.00 0.00 3.08
3552 4006 6.212791 ACAGCCTCTTACAGAAATGTAGGTAA 59.787 38.462 0.00 0.00 0.00 2.85
3553 4007 7.103641 CAGCCTCTTACAGAAATGTAGGTAAA 58.896 38.462 0.00 0.00 0.00 2.01
3554 4008 7.278868 CAGCCTCTTACAGAAATGTAGGTAAAG 59.721 40.741 0.00 0.00 0.00 1.85
3555 4009 6.539103 GCCTCTTACAGAAATGTAGGTAAAGG 59.461 42.308 0.00 0.00 32.87 3.11
3556 4010 6.539103 CCTCTTACAGAAATGTAGGTAAAGGC 59.461 42.308 0.00 0.00 0.00 4.35
3557 4011 7.253905 TCTTACAGAAATGTAGGTAAAGGCT 57.746 36.000 0.00 0.00 0.00 4.58
3558 4012 7.103641 TCTTACAGAAATGTAGGTAAAGGCTG 58.896 38.462 0.00 0.00 0.00 4.85
3559 4013 4.010349 ACAGAAATGTAGGTAAAGGCTGC 58.990 43.478 0.00 0.00 0.00 5.25
3560 4014 3.063997 CAGAAATGTAGGTAAAGGCTGCG 59.936 47.826 0.00 0.00 0.00 5.18
3561 4015 2.781681 AATGTAGGTAAAGGCTGCGT 57.218 45.000 0.00 0.00 0.00 5.24
3562 4016 3.899052 AATGTAGGTAAAGGCTGCGTA 57.101 42.857 0.00 0.00 0.00 4.42
3563 4017 2.660189 TGTAGGTAAAGGCTGCGTAC 57.340 50.000 0.00 0.00 33.22 3.67
3564 4018 2.173519 TGTAGGTAAAGGCTGCGTACT 58.826 47.619 13.78 0.00 33.61 2.73
3565 4019 3.355378 TGTAGGTAAAGGCTGCGTACTA 58.645 45.455 13.78 0.00 33.61 1.82
3566 4020 3.956199 TGTAGGTAAAGGCTGCGTACTAT 59.044 43.478 13.78 0.00 33.61 2.12
3567 4021 5.132502 TGTAGGTAAAGGCTGCGTACTATA 58.867 41.667 13.78 0.00 33.61 1.31
3568 4022 4.850347 AGGTAAAGGCTGCGTACTATAG 57.150 45.455 0.00 0.00 0.00 1.31
3569 4023 4.467769 AGGTAAAGGCTGCGTACTATAGA 58.532 43.478 6.78 0.00 0.00 1.98
3570 4024 4.277921 AGGTAAAGGCTGCGTACTATAGAC 59.722 45.833 6.78 0.00 0.00 2.59
3571 4025 3.729862 AAAGGCTGCGTACTATAGACC 57.270 47.619 6.78 0.00 0.00 3.85
3572 4026 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
3573 4027 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
3574 4028 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
3575 4029 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
3576 4030 3.431207 GGCTGCGTACTATAGACCCAAAA 60.431 47.826 6.78 0.00 0.00 2.44
3577 4031 4.377897 GCTGCGTACTATAGACCCAAAAT 58.622 43.478 6.78 0.00 0.00 1.82
3578 4032 4.211374 GCTGCGTACTATAGACCCAAAATG 59.789 45.833 6.78 0.00 0.00 2.32
3579 4033 4.699637 TGCGTACTATAGACCCAAAATGG 58.300 43.478 6.78 0.00 37.25 3.16
3580 4034 4.162698 TGCGTACTATAGACCCAAAATGGT 59.837 41.667 6.78 0.00 42.79 3.55
3586 4040 2.563297 GACCCAAAATGGTCGGACC 58.437 57.895 20.36 20.36 44.98 4.46
3587 4041 0.963856 GACCCAAAATGGTCGGACCC 60.964 60.000 23.81 7.15 44.98 4.46
3588 4042 1.382629 CCCAAAATGGTCGGACCCT 59.617 57.895 23.81 12.03 37.50 4.34
3589 4043 0.251608 CCCAAAATGGTCGGACCCTT 60.252 55.000 23.81 17.44 37.50 3.95
3590 4044 1.173913 CCAAAATGGTCGGACCCTTC 58.826 55.000 23.81 0.00 37.50 3.46
3591 4045 1.173913 CAAAATGGTCGGACCCTTCC 58.826 55.000 23.81 0.00 37.50 3.46
3592 4046 0.039180 AAAATGGTCGGACCCTTCCC 59.961 55.000 23.81 0.00 38.99 3.97
3593 4047 1.859841 AAATGGTCGGACCCTTCCCC 61.860 60.000 23.81 0.00 38.99 4.81
3600 4054 4.735599 GACCCTTCCCCGGACCCT 62.736 72.222 0.73 0.00 0.00 4.34
3627 4081 2.203070 GGAGCTACATGCACCGGG 60.203 66.667 6.32 0.00 42.21 5.73
3628 4082 2.897350 GAGCTACATGCACCGGGC 60.897 66.667 6.32 7.25 45.94 6.13
3629 4083 3.391665 GAGCTACATGCACCGGGCT 62.392 63.158 6.32 0.81 45.94 5.19
3630 4084 3.204827 GCTACATGCACCGGGCTG 61.205 66.667 6.32 9.21 45.15 4.85
3631 4085 3.204827 CTACATGCACCGGGCTGC 61.205 66.667 6.32 8.50 45.15 5.25
3632 4086 4.794648 TACATGCACCGGGCTGCC 62.795 66.667 11.05 11.05 45.15 4.85
3638 4092 2.917227 CACCGGGCTGCCCTTTTT 60.917 61.111 33.39 13.23 42.67 1.94
3669 4123 6.892658 ATTAGTAAAGTTGTGACCATGCAA 57.107 33.333 0.00 0.00 0.00 4.08
3818 4307 2.033049 GCTCTGCCAATATGCTGTTCTG 59.967 50.000 0.00 0.00 0.00 3.02
3819 4308 3.276857 CTCTGCCAATATGCTGTTCTGT 58.723 45.455 0.00 0.00 0.00 3.41
3820 4309 3.273434 TCTGCCAATATGCTGTTCTGTC 58.727 45.455 0.00 0.00 0.00 3.51
3821 4310 3.011818 CTGCCAATATGCTGTTCTGTCA 58.988 45.455 0.00 0.00 0.00 3.58
3822 4311 3.419943 TGCCAATATGCTGTTCTGTCAA 58.580 40.909 0.00 0.00 0.00 3.18
3823 4312 4.018490 TGCCAATATGCTGTTCTGTCAAT 58.982 39.130 0.00 0.00 0.00 2.57
3824 4313 5.192176 TGCCAATATGCTGTTCTGTCAATA 58.808 37.500 0.00 0.00 0.00 1.90
3825 4314 5.651576 TGCCAATATGCTGTTCTGTCAATAA 59.348 36.000 0.00 0.00 0.00 1.40
3826 4315 6.152492 TGCCAATATGCTGTTCTGTCAATAAA 59.848 34.615 0.00 0.00 0.00 1.40
3827 4316 6.694411 GCCAATATGCTGTTCTGTCAATAAAG 59.306 38.462 0.00 0.00 0.00 1.85
3828 4317 7.198390 CCAATATGCTGTTCTGTCAATAAAGG 58.802 38.462 0.00 0.00 0.00 3.11
3829 4318 7.067372 CCAATATGCTGTTCTGTCAATAAAGGA 59.933 37.037 0.00 0.00 0.00 3.36
3830 4319 8.461222 CAATATGCTGTTCTGTCAATAAAGGAA 58.539 33.333 0.00 0.00 0.00 3.36
3831 4320 8.757982 ATATGCTGTTCTGTCAATAAAGGAAT 57.242 30.769 0.00 0.00 0.00 3.01
3832 4321 6.899393 TGCTGTTCTGTCAATAAAGGAATT 57.101 33.333 0.00 0.00 0.00 2.17
3833 4322 7.288810 TGCTGTTCTGTCAATAAAGGAATTT 57.711 32.000 0.00 0.00 0.00 1.82
3834 4323 7.725251 TGCTGTTCTGTCAATAAAGGAATTTT 58.275 30.769 0.00 0.00 0.00 1.82
3835 4324 7.652909 TGCTGTTCTGTCAATAAAGGAATTTTG 59.347 33.333 0.00 0.00 0.00 2.44
3836 4325 7.359514 GCTGTTCTGTCAATAAAGGAATTTTGC 60.360 37.037 0.00 0.00 0.00 3.68
3837 4326 7.725251 TGTTCTGTCAATAAAGGAATTTTGCT 58.275 30.769 0.00 0.00 0.00 3.91
3838 4327 8.203485 TGTTCTGTCAATAAAGGAATTTTGCTT 58.797 29.630 0.00 0.00 40.77 3.91
3839 4328 8.703336 GTTCTGTCAATAAAGGAATTTTGCTTC 58.297 33.333 0.00 0.00 37.91 3.86
3840 4329 8.181904 TCTGTCAATAAAGGAATTTTGCTTCT 57.818 30.769 0.00 0.00 37.91 2.85
3841 4330 8.084073 TCTGTCAATAAAGGAATTTTGCTTCTG 58.916 33.333 0.00 0.00 37.91 3.02
3842 4331 7.950512 TGTCAATAAAGGAATTTTGCTTCTGA 58.049 30.769 0.00 0.21 37.91 3.27
3843 4332 8.420222 TGTCAATAAAGGAATTTTGCTTCTGAA 58.580 29.630 0.00 0.00 37.91 3.02
3844 4333 8.703336 GTCAATAAAGGAATTTTGCTTCTGAAC 58.297 33.333 0.00 0.00 37.91 3.18
3845 4334 8.420222 TCAATAAAGGAATTTTGCTTCTGAACA 58.580 29.630 0.00 0.00 37.91 3.18
3846 4335 9.211485 CAATAAAGGAATTTTGCTTCTGAACAT 57.789 29.630 0.00 0.00 37.91 2.71
3847 4336 9.783081 AATAAAGGAATTTTGCTTCTGAACATT 57.217 25.926 0.00 0.00 37.91 2.71
3848 4337 7.719778 AAAGGAATTTTGCTTCTGAACATTC 57.280 32.000 0.00 0.00 37.91 2.67
3849 4338 5.787380 AGGAATTTTGCTTCTGAACATTCC 58.213 37.500 0.00 0.00 38.92 3.01
3850 4339 5.305128 AGGAATTTTGCTTCTGAACATTCCA 59.695 36.000 11.89 0.00 40.42 3.53
3851 4340 6.013984 AGGAATTTTGCTTCTGAACATTCCAT 60.014 34.615 11.89 0.00 40.42 3.41
3852 4341 6.091713 GGAATTTTGCTTCTGAACATTCCATG 59.908 38.462 0.00 0.00 38.62 3.66
3971 4461 1.377994 CTGGCTTGAAGTCAGGGCT 59.622 57.895 18.60 0.00 43.91 5.19
3989 4483 0.527113 CTTGAATGGCGTTGCATCCA 59.473 50.000 0.00 5.49 36.70 3.41
4041 4535 2.753043 CTGGGATGCACTGTGGGC 60.753 66.667 10.21 0.00 0.00 5.36
4067 4561 7.148154 CGATATCTCCTCTAGTTGGTATTCTGG 60.148 44.444 0.34 0.00 0.00 3.86
4068 4562 4.547671 TCTCCTCTAGTTGGTATTCTGGG 58.452 47.826 4.87 0.00 0.00 4.45
4121 4850 5.059343 CACAGTCGATACTTAACAGTGTTCG 59.941 44.000 12.82 9.12 39.52 3.95
4136 4865 1.684450 TGTTCGTCAGTACAAGCCTCA 59.316 47.619 0.00 0.00 0.00 3.86
4141 4870 5.142061 TCGTCAGTACAAGCCTCAAAATA 57.858 39.130 0.00 0.00 0.00 1.40
4209 4938 1.419762 TCAACAGGCTGCAGGAACTTA 59.580 47.619 17.12 0.00 34.60 2.24
4257 4986 2.952310 AGCTTGGAGGAACTTGTGTTTC 59.048 45.455 0.00 0.00 41.55 2.78
4260 4989 3.644966 TGGAGGAACTTGTGTTTCAGT 57.355 42.857 0.00 0.00 41.55 3.41
4287 5016 4.699637 TGTAACCAATATAGAGGCAACGG 58.300 43.478 0.00 0.00 46.39 4.44
4453 5211 5.764686 ACACAATGCAGAACATACTCTTCAA 59.235 36.000 0.00 0.00 38.34 2.69
4459 5217 7.080353 TGCAGAACATACTCTTCAATTCATG 57.920 36.000 0.00 0.00 0.00 3.07
4527 5390 3.382546 GCCAATTTGCCATGTATCAGACT 59.617 43.478 0.00 0.00 0.00 3.24
4554 5417 4.689612 TCTGATAGGGTGTTAATCAGGC 57.310 45.455 10.68 0.00 44.37 4.85
4555 5418 4.298626 TCTGATAGGGTGTTAATCAGGCT 58.701 43.478 10.68 0.00 44.37 4.58
4560 5423 9.201989 CTGATAGGGTGTTAATCAGGCTATATA 57.798 37.037 4.07 0.00 41.82 0.86
4748 5612 8.306313 TCCAAGCTGTAGTGATTCTCTTTATA 57.694 34.615 0.00 0.00 0.00 0.98
4749 5613 8.928448 TCCAAGCTGTAGTGATTCTCTTTATAT 58.072 33.333 0.00 0.00 0.00 0.86
4750 5614 9.553064 CCAAGCTGTAGTGATTCTCTTTATATT 57.447 33.333 0.00 0.00 0.00 1.28
4785 5651 5.882557 ACAGCAGGTTTACATTCTAATCTGG 59.117 40.000 0.00 0.00 0.00 3.86
4882 5759 0.398318 GTTTGGAGACCCTCAGCACT 59.602 55.000 0.00 0.00 31.08 4.40
4963 5840 3.817647 ACTCTTTCCACTTCTTGTGCATC 59.182 43.478 0.00 0.00 44.92 3.91
4976 5853 1.451927 TGCATCGCCTCCAACATCC 60.452 57.895 0.00 0.00 0.00 3.51
5068 5945 0.038892 CATTGCTGCACAACCAGTCC 60.039 55.000 0.00 0.00 42.27 3.85
5212 6089 0.966875 TTGATCCATGCCTGCGCTTT 60.967 50.000 9.73 0.00 35.36 3.51
5250 6127 0.679002 GTGGCAGCTCACCATCATGT 60.679 55.000 8.22 0.00 39.95 3.21
5251 6128 0.678684 TGGCAGCTCACCATCATGTG 60.679 55.000 0.62 0.00 37.59 3.21
5254 6131 1.460504 CAGCTCACCATCATGTGCTT 58.539 50.000 0.00 0.00 44.81 3.91
5364 6241 1.547820 TGCTTCACCAAGTGTGCAAAA 59.452 42.857 12.80 0.00 45.03 2.44
5389 6266 1.134848 GCTTACCTCTCAGTCAGCCTG 60.135 57.143 0.00 0.00 42.97 4.85
5434 6311 0.251165 TCTTGGTTGCCAGCCCTAAC 60.251 55.000 0.00 0.00 33.81 2.34
5500 6377 1.096967 TCTCCATGCGCGCAATTGAT 61.097 50.000 39.68 19.40 0.00 2.57
5512 6389 1.536709 GCAATTGATCGGTTGGCCATC 60.537 52.381 6.09 5.53 34.09 3.51
5613 6490 0.108424 ATCGAACACCTCTGCTCTGC 60.108 55.000 0.00 0.00 0.00 4.26
5761 6638 0.955428 ACATGAACCGTGCGAGCATT 60.955 50.000 0.00 0.00 0.00 3.56
5788 6665 1.002134 CCAGTTCCATGTCGGGCTT 60.002 57.895 0.00 0.00 34.36 4.35
5824 6701 1.366679 ACAGCTTCGTGATGCATGAG 58.633 50.000 2.46 0.00 35.06 2.90
5862 6739 3.712881 GTTGCTCGGCGGTGTCAC 61.713 66.667 7.21 0.00 0.00 3.67
5866 6743 3.991051 CTCGGCGGTGTCACAGGT 61.991 66.667 7.21 0.00 0.00 4.00
5914 6791 0.614979 GTGGAGTGGTGAGGCTAGGA 60.615 60.000 0.00 0.00 0.00 2.94
6019 6896 3.839432 GGCGGAAGAGAGGACCGG 61.839 72.222 0.00 0.00 45.66 5.28
6022 6899 2.762234 CGGAAGAGAGGACCGGTCG 61.762 68.421 27.68 10.33 42.48 4.79
6385 7263 3.307691 GGTTCAGAGTCCATCCATGTTGA 60.308 47.826 0.00 0.00 0.00 3.18
6386 7264 3.900966 TCAGAGTCCATCCATGTTGAG 57.099 47.619 0.00 0.00 0.00 3.02
6387 7265 2.502947 TCAGAGTCCATCCATGTTGAGG 59.497 50.000 0.00 0.00 0.00 3.86
6388 7266 1.211457 AGAGTCCATCCATGTTGAGGC 59.789 52.381 0.00 0.00 0.00 4.70
6389 7267 1.211457 GAGTCCATCCATGTTGAGGCT 59.789 52.381 0.00 0.00 0.00 4.58
6465 7359 0.321996 AAAGCTCCAGGACGGAAGAC 59.678 55.000 0.00 0.00 45.75 3.01
6522 7416 7.337333 AAGCAATGCAATGTATCTTTGCTGTC 61.337 38.462 17.81 7.97 46.24 3.51
6528 7422 6.943981 GCAATGTATCTTTGCTGTCGTATAA 58.056 36.000 11.31 0.00 44.71 0.98
6529 7423 7.576236 GCAATGTATCTTTGCTGTCGTATAAT 58.424 34.615 11.31 0.00 44.71 1.28
6530 7424 8.708742 GCAATGTATCTTTGCTGTCGTATAATA 58.291 33.333 11.31 0.00 44.71 0.98
6533 7427 8.239681 TGTATCTTTGCTGTCGTATAATATGC 57.760 34.615 0.00 0.00 0.00 3.14
6568 7462 8.583810 AATTCAAGTTTGAGAACATGACATTG 57.416 30.769 0.00 0.00 41.57 2.82
6617 7512 3.505680 GCCCATGTTTCAGTGTGTCATAA 59.494 43.478 0.00 0.00 0.00 1.90
6665 7572 9.720667 TTCATAAACAATCATCTTTTATGCTCG 57.279 29.630 7.97 0.00 40.61 5.03
6803 7710 4.082845 TGTTCGGAAATCCAATTTGGCTA 58.917 39.130 10.76 0.00 37.47 3.93
6853 7760 9.512435 CCAAAAATGCATTTTACAAATGTCAAA 57.488 25.926 31.87 0.00 39.20 2.69
7000 7907 4.351874 TTTTGTACTCCCTCTGTTCCAG 57.648 45.455 0.00 0.00 0.00 3.86
7153 8063 6.110033 TGGTGTTGCAGACGTTATAATACAT 58.890 36.000 0.00 0.00 0.00 2.29
7155 8065 7.764901 TGGTGTTGCAGACGTTATAATACATTA 59.235 33.333 0.00 0.00 0.00 1.90
7156 8066 8.273557 GGTGTTGCAGACGTTATAATACATTAG 58.726 37.037 0.00 0.00 0.00 1.73
7158 8068 8.198778 TGTTGCAGACGTTATAATACATTAGGA 58.801 33.333 0.00 0.00 0.00 2.94
7159 8069 8.485591 GTTGCAGACGTTATAATACATTAGGAC 58.514 37.037 0.00 0.00 0.00 3.85
7160 8070 7.718525 TGCAGACGTTATAATACATTAGGACA 58.281 34.615 0.00 0.00 0.00 4.02
7161 8071 8.198778 TGCAGACGTTATAATACATTAGGACAA 58.801 33.333 0.00 0.00 0.00 3.18
7162 8072 9.037737 GCAGACGTTATAATACATTAGGACAAA 57.962 33.333 0.00 0.00 0.00 2.83
7164 8074 9.760077 AGACGTTATAATACATTAGGACAAAGG 57.240 33.333 0.00 0.00 0.00 3.11
7165 8075 9.538508 GACGTTATAATACATTAGGACAAAGGT 57.461 33.333 0.00 0.00 0.00 3.50
7173 8083 9.449719 AATACATTAGGACAAAGGTAGAACTTG 57.550 33.333 0.00 0.00 30.07 3.16
7174 8084 7.074653 ACATTAGGACAAAGGTAGAACTTGA 57.925 36.000 0.00 0.00 0.00 3.02
7175 8085 7.514721 ACATTAGGACAAAGGTAGAACTTGAA 58.485 34.615 0.00 0.00 0.00 2.69
7176 8086 7.661847 ACATTAGGACAAAGGTAGAACTTGAAG 59.338 37.037 0.00 0.00 0.00 3.02
7177 8087 5.632034 AGGACAAAGGTAGAACTTGAAGT 57.368 39.130 0.00 0.00 0.00 3.01
7178 8088 6.742559 AGGACAAAGGTAGAACTTGAAGTA 57.257 37.500 0.00 0.00 0.00 2.24
7179 8089 7.133133 AGGACAAAGGTAGAACTTGAAGTAA 57.867 36.000 0.00 0.00 0.00 2.24
7180 8090 7.746703 AGGACAAAGGTAGAACTTGAAGTAAT 58.253 34.615 0.00 0.00 0.00 1.89
7181 8091 8.218488 AGGACAAAGGTAGAACTTGAAGTAATT 58.782 33.333 0.00 0.00 0.00 1.40
7182 8092 8.290325 GGACAAAGGTAGAACTTGAAGTAATTG 58.710 37.037 0.00 0.07 0.00 2.32
7183 8093 8.166422 ACAAAGGTAGAACTTGAAGTAATTGG 57.834 34.615 0.00 0.00 0.00 3.16
7184 8094 7.996644 ACAAAGGTAGAACTTGAAGTAATTGGA 59.003 33.333 0.00 0.00 0.00 3.53
7185 8095 8.846211 CAAAGGTAGAACTTGAAGTAATTGGAA 58.154 33.333 0.00 0.00 0.00 3.53
7186 8096 7.981102 AGGTAGAACTTGAAGTAATTGGAAC 57.019 36.000 0.00 0.00 0.00 3.62
7187 8097 6.940867 AGGTAGAACTTGAAGTAATTGGAACC 59.059 38.462 0.00 0.56 0.00 3.62
7188 8098 5.941948 AGAACTTGAAGTAATTGGAACCG 57.058 39.130 0.00 0.00 0.00 4.44
7189 8099 5.617252 AGAACTTGAAGTAATTGGAACCGA 58.383 37.500 0.00 0.00 0.00 4.69
7190 8100 5.701290 AGAACTTGAAGTAATTGGAACCGAG 59.299 40.000 0.00 0.00 0.00 4.63
7191 8101 4.324267 ACTTGAAGTAATTGGAACCGAGG 58.676 43.478 0.00 0.00 0.00 4.63
7192 8102 3.343941 TGAAGTAATTGGAACCGAGGG 57.656 47.619 0.00 0.00 0.00 4.30
7193 8103 2.907696 TGAAGTAATTGGAACCGAGGGA 59.092 45.455 0.00 0.00 0.00 4.20
7194 8104 3.055385 TGAAGTAATTGGAACCGAGGGAG 60.055 47.826 0.00 0.00 0.00 4.30
7195 8105 2.547990 AGTAATTGGAACCGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
7196 8106 3.716431 AGTAATTGGAACCGAGGGAGTA 58.284 45.455 0.00 0.00 0.00 2.59
7197 8107 3.450096 AGTAATTGGAACCGAGGGAGTAC 59.550 47.826 0.00 0.00 0.00 2.73
7198 8108 1.946984 ATTGGAACCGAGGGAGTACA 58.053 50.000 0.00 0.00 0.00 2.90
7199 8109 1.719529 TTGGAACCGAGGGAGTACAA 58.280 50.000 0.00 0.00 0.00 2.41
7200 8110 1.719529 TGGAACCGAGGGAGTACAAA 58.280 50.000 0.00 0.00 0.00 2.83
7201 8111 1.345415 TGGAACCGAGGGAGTACAAAC 59.655 52.381 0.00 0.00 0.00 2.93
7202 8112 1.338484 GGAACCGAGGGAGTACAAACC 60.338 57.143 0.00 0.00 0.00 3.27
7203 8113 1.622312 GAACCGAGGGAGTACAAACCT 59.378 52.381 3.04 3.04 37.31 3.50
7204 8114 1.725803 ACCGAGGGAGTACAAACCTT 58.274 50.000 0.00 0.00 34.02 3.50
7205 8115 1.346722 ACCGAGGGAGTACAAACCTTG 59.653 52.381 9.61 9.61 34.02 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 6.539649 TGTGGAAGAAGAAATAAAGTGTCG 57.460 37.500 0.00 0.00 0.00 4.35
115 116 8.607459 TGCGTCAATATTGTGTTTTTCAAAAAT 58.393 25.926 14.97 0.00 0.00 1.82
116 117 7.900352 GTGCGTCAATATTGTGTTTTTCAAAAA 59.100 29.630 14.97 0.00 0.00 1.94
121 122 5.685511 ACTGTGCGTCAATATTGTGTTTTTC 59.314 36.000 14.97 3.04 0.00 2.29
122 123 5.587289 ACTGTGCGTCAATATTGTGTTTTT 58.413 33.333 14.97 0.00 0.00 1.94
123 124 5.181690 ACTGTGCGTCAATATTGTGTTTT 57.818 34.783 14.97 0.00 0.00 2.43
141 142 1.915489 TGCATTCATAGGGGTGACTGT 59.085 47.619 0.00 0.00 32.99 3.55
167 169 7.895759 TGTGCATGTAAGTATCTGCATCTATA 58.104 34.615 0.00 0.00 45.42 1.31
168 170 6.762333 TGTGCATGTAAGTATCTGCATCTAT 58.238 36.000 0.00 0.00 45.42 1.98
169 171 6.160576 TGTGCATGTAAGTATCTGCATCTA 57.839 37.500 0.00 0.00 45.42 1.98
170 172 5.027293 TGTGCATGTAAGTATCTGCATCT 57.973 39.130 0.00 0.00 45.42 2.90
171 173 5.686834 CATGTGCATGTAAGTATCTGCATC 58.313 41.667 4.13 0.00 45.42 3.91
172 174 4.023450 GCATGTGCATGTAAGTATCTGCAT 60.023 41.667 12.96 0.00 45.42 3.96
174 176 3.881795 GCATGTGCATGTAAGTATCTGC 58.118 45.455 12.96 0.00 40.80 4.26
204 212 3.007831 TGTGTATGTGTGCATTCAGAGGA 59.992 43.478 0.00 0.00 33.96 3.71
205 213 3.337358 TGTGTATGTGTGCATTCAGAGG 58.663 45.455 0.00 0.00 33.96 3.69
218 226 5.425217 TGATTGTAGAGGTGGATGTGTATGT 59.575 40.000 0.00 0.00 0.00 2.29
222 230 3.055094 GGTGATTGTAGAGGTGGATGTGT 60.055 47.826 0.00 0.00 0.00 3.72
240 249 1.169577 GCTCAGTCTCTCGAAGGTGA 58.830 55.000 0.00 0.00 0.00 4.02
425 759 4.429854 AGCTTGGATTATCAGAGGTTCC 57.570 45.455 0.00 0.00 0.00 3.62
466 800 4.402793 AGTGTACTAGCTTTGGATCATCGT 59.597 41.667 0.00 0.00 0.00 3.73
598 932 9.252962 GCATTCCGAATTTTAAATCATCTGAAT 57.747 29.630 0.00 0.00 0.00 2.57
629 963 4.093115 GGAAAAGAAGACTACTTTAGCGGC 59.907 45.833 0.00 0.00 36.71 6.53
641 975 5.351740 CGAGGGTCTTTATGGAAAAGAAGAC 59.648 44.000 1.96 6.55 44.42 3.01
668 1003 1.588139 CGTCGGCGTCCAGATTACC 60.588 63.158 6.85 0.00 0.00 2.85
699 1034 1.841556 GACACCCCTCCACAGACCA 60.842 63.158 0.00 0.00 0.00 4.02
700 1035 2.943978 CGACACCCCTCCACAGACC 61.944 68.421 0.00 0.00 0.00 3.85
701 1036 2.657237 CGACACCCCTCCACAGAC 59.343 66.667 0.00 0.00 0.00 3.51
702 1037 2.603473 CCGACACCCCTCCACAGA 60.603 66.667 0.00 0.00 0.00 3.41
703 1038 2.603473 TCCGACACCCCTCCACAG 60.603 66.667 0.00 0.00 0.00 3.66
704 1039 2.603473 CTCCGACACCCCTCCACA 60.603 66.667 0.00 0.00 0.00 4.17
705 1040 3.391382 CCTCCGACACCCCTCCAC 61.391 72.222 0.00 0.00 0.00 4.02
754 1089 2.609491 GCCCTTGTCATTTTCCCGTTTC 60.609 50.000 0.00 0.00 0.00 2.78
762 1097 2.497273 GCAGTATGGCCCTTGTCATTTT 59.503 45.455 0.00 0.00 38.02 1.82
817 1152 4.290093 TCTCTCTCTCTCTCTCTAGCAGT 58.710 47.826 0.00 0.00 0.00 4.40
818 1153 4.343526 ACTCTCTCTCTCTCTCTCTAGCAG 59.656 50.000 0.00 0.00 0.00 4.24
819 1154 4.290093 ACTCTCTCTCTCTCTCTCTAGCA 58.710 47.826 0.00 0.00 0.00 3.49
820 1155 4.946478 ACTCTCTCTCTCTCTCTCTAGC 57.054 50.000 0.00 0.00 0.00 3.42
822 1157 7.950124 TCATCATACTCTCTCTCTCTCTCTCTA 59.050 40.741 0.00 0.00 0.00 2.43
823 1158 6.784473 TCATCATACTCTCTCTCTCTCTCTCT 59.216 42.308 0.00 0.00 0.00 3.10
898 1233 2.356673 GCTTTGGCTGCCTTGTGC 60.357 61.111 21.03 14.40 41.77 4.57
918 1253 1.599797 GGTGCTGGTGTAAACGCCT 60.600 57.895 13.53 0.00 46.36 5.52
932 1267 0.823356 TTTCTTGCTGTCCTGGGTGC 60.823 55.000 0.00 0.00 0.00 5.01
937 1272 1.242076 CCCTGTTTCTTGCTGTCCTG 58.758 55.000 0.00 0.00 0.00 3.86
1131 1475 4.352893 GGGAGAGGGAGAGAGAGTATTACT 59.647 50.000 0.00 0.00 0.00 2.24
1161 1509 7.334090 TCTGATGAAATGTAGAGAAGGAAAGG 58.666 38.462 0.00 0.00 0.00 3.11
1164 1512 7.724490 TCTCTGATGAAATGTAGAGAAGGAA 57.276 36.000 0.00 0.00 39.14 3.36
1167 1515 9.086336 GAGTTTCTCTGATGAAATGTAGAGAAG 57.914 37.037 13.28 0.00 45.75 2.85
1168 1516 8.037758 GGAGTTTCTCTGATGAAATGTAGAGAA 58.962 37.037 10.51 10.51 44.63 2.87
1169 1517 7.398618 AGGAGTTTCTCTGATGAAATGTAGAGA 59.601 37.037 0.00 0.00 39.86 3.10
1170 1518 7.555087 AGGAGTTTCTCTGATGAAATGTAGAG 58.445 38.462 0.00 0.00 38.09 2.43
1171 1519 7.487822 AGGAGTTTCTCTGATGAAATGTAGA 57.512 36.000 5.87 0.00 38.09 2.59
1172 1520 8.558973 AAAGGAGTTTCTCTGATGAAATGTAG 57.441 34.615 5.87 0.00 38.09 2.74
1173 1521 8.924511 AAAAGGAGTTTCTCTGATGAAATGTA 57.075 30.769 5.87 0.00 38.09 2.29
1194 1542 3.080319 CAGCCCAGAGGAAGAAGAAAAG 58.920 50.000 0.00 0.00 33.47 2.27
1260 1608 0.960364 CCCCAAACCAGGTCATCACG 60.960 60.000 0.00 0.00 0.00 4.35
1263 1611 1.250840 GCACCCCAAACCAGGTCATC 61.251 60.000 0.00 0.00 32.72 2.92
1288 1636 2.481276 CGTGTGTGTGAGAGAGAAACCA 60.481 50.000 0.00 0.00 0.00 3.67
1292 1645 2.021457 TGACGTGTGTGTGAGAGAGAA 58.979 47.619 0.00 0.00 0.00 2.87
1301 1654 0.528466 CTGCTCACTGACGTGTGTGT 60.528 55.000 14.57 0.00 41.89 3.72
1303 1656 1.068083 CCTGCTCACTGACGTGTGT 59.932 57.895 0.00 0.00 41.89 3.72
1305 1658 2.029666 GCCTGCTCACTGACGTGT 59.970 61.111 0.00 0.00 41.89 4.49
1315 1706 0.169009 GAACATGAAACCGCCTGCTC 59.831 55.000 0.00 0.00 0.00 4.26
1378 1776 4.755123 TCCCGTTGAGATTTGAGAAAGAAC 59.245 41.667 0.00 0.00 0.00 3.01
1404 1802 1.551883 AGGCATTTGCAACAATCCTCC 59.448 47.619 0.00 0.00 44.36 4.30
1435 1833 2.040813 AGGAGAAGATCAGCAAAGCCAA 59.959 45.455 0.00 0.00 0.00 4.52
1439 1837 7.862512 AATTTCTAGGAGAAGATCAGCAAAG 57.137 36.000 0.00 0.00 35.37 2.77
1442 1840 7.551974 CAGAAAATTTCTAGGAGAAGATCAGCA 59.448 37.037 8.03 0.00 38.11 4.41
1444 1842 9.835389 ATCAGAAAATTTCTAGGAGAAGATCAG 57.165 33.333 8.03 0.00 38.11 2.90
1470 1870 3.330701 ACTTGGGAATTTACTGAGCCTCA 59.669 43.478 0.00 0.00 0.00 3.86
1473 1873 5.468540 AAAACTTGGGAATTTACTGAGCC 57.531 39.130 0.00 0.00 0.00 4.70
1559 1963 0.035152 TAGAACACATGGCTGGGCAG 60.035 55.000 0.00 0.00 0.00 4.85
1693 2097 7.595488 AGATCTATTTTTGGTGGGGATGTAAT 58.405 34.615 0.00 0.00 0.00 1.89
1699 2103 5.163343 CGTCTAGATCTATTTTTGGTGGGGA 60.163 44.000 2.11 0.00 0.00 4.81
1725 2130 9.638239 TTTTCATAGATACAAATTTTCAGTGGC 57.362 29.630 0.00 0.00 0.00 5.01
1831 2259 2.747446 AGACAAAATATGGTCCGTGTGC 59.253 45.455 0.00 0.00 34.58 4.57
1835 2263 2.676342 GCGAAGACAAAATATGGTCCGT 59.324 45.455 0.00 0.00 34.58 4.69
1836 2264 2.936498 AGCGAAGACAAAATATGGTCCG 59.064 45.455 0.00 0.00 34.58 4.79
1837 2265 3.065371 CCAGCGAAGACAAAATATGGTCC 59.935 47.826 0.00 0.00 34.58 4.46
1909 2337 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1912 2340 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1913 2341 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1914 2342 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1915 2343 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1916 2344 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1917 2345 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1918 2346 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1919 2347 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1920 2348 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1921 2349 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1922 2350 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1923 2351 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1924 2352 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1925 2353 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1926 2354 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1927 2355 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1928 2356 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1929 2357 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1930 2358 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1931 2359 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1932 2360 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1933 2361 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1934 2362 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1935 2363 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1936 2364 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1937 2365 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1938 2366 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1939 2367 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1940 2368 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1941 2369 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1942 2370 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1943 2371 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
1944 2372 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
1945 2373 4.648762 ACAGAGAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
1946 2374 4.403752 CACAGAGAGAGAGAGAGAGAGAGA 59.596 50.000 0.00 0.00 0.00 3.10
1947 2375 4.161189 ACACAGAGAGAGAGAGAGAGAGAG 59.839 50.000 0.00 0.00 0.00 3.20
1948 2376 4.081476 CACACAGAGAGAGAGAGAGAGAGA 60.081 50.000 0.00 0.00 0.00 3.10
1949 2377 4.186926 CACACAGAGAGAGAGAGAGAGAG 58.813 52.174 0.00 0.00 0.00 3.20
1950 2378 3.582647 ACACACAGAGAGAGAGAGAGAGA 59.417 47.826 0.00 0.00 0.00 3.10
1951 2379 3.686241 CACACACAGAGAGAGAGAGAGAG 59.314 52.174 0.00 0.00 0.00 3.20
1952 2380 3.072330 ACACACACAGAGAGAGAGAGAGA 59.928 47.826 0.00 0.00 0.00 3.10
1953 2381 3.189080 CACACACACAGAGAGAGAGAGAG 59.811 52.174 0.00 0.00 0.00 3.20
1954 2382 3.145286 CACACACACAGAGAGAGAGAGA 58.855 50.000 0.00 0.00 0.00 3.10
1955 2383 2.884012 ACACACACACAGAGAGAGAGAG 59.116 50.000 0.00 0.00 0.00 3.20
1956 2384 2.620585 CACACACACACAGAGAGAGAGA 59.379 50.000 0.00 0.00 0.00 3.10
1957 2385 2.360483 ACACACACACACAGAGAGAGAG 59.640 50.000 0.00 0.00 0.00 3.20
1958 2386 2.099756 CACACACACACACAGAGAGAGA 59.900 50.000 0.00 0.00 0.00 3.10
1959 2387 2.159184 ACACACACACACACAGAGAGAG 60.159 50.000 0.00 0.00 0.00 3.20
1960 2388 1.824852 ACACACACACACACAGAGAGA 59.175 47.619 0.00 0.00 0.00 3.10
1961 2389 1.929169 CACACACACACACACAGAGAG 59.071 52.381 0.00 0.00 0.00 3.20
1962 2390 1.275010 ACACACACACACACACAGAGA 59.725 47.619 0.00 0.00 0.00 3.10
1963 2391 1.394572 CACACACACACACACACAGAG 59.605 52.381 0.00 0.00 0.00 3.35
1964 2392 1.270571 ACACACACACACACACACAGA 60.271 47.619 0.00 0.00 0.00 3.41
1965 2393 1.136000 CACACACACACACACACACAG 60.136 52.381 0.00 0.00 0.00 3.66
2092 2520 0.804989 GCTGAAACATTAGCACCGCT 59.195 50.000 0.00 0.00 43.41 5.52
2136 2564 4.708726 ACAACCCATGTAGTACTCGTAC 57.291 45.455 0.00 0.00 41.63 3.67
2137 2565 4.082081 CCAACAACCCATGTAGTACTCGTA 60.082 45.833 0.00 0.00 42.99 3.43
2138 2566 3.306502 CCAACAACCCATGTAGTACTCGT 60.307 47.826 0.00 0.00 42.99 4.18
2139 2567 3.259064 CCAACAACCCATGTAGTACTCG 58.741 50.000 0.00 0.00 42.99 4.18
2140 2568 4.000988 CACCAACAACCCATGTAGTACTC 58.999 47.826 0.00 0.00 42.99 2.59
2141 2569 3.244770 CCACCAACAACCCATGTAGTACT 60.245 47.826 0.00 0.00 42.99 2.73
2241 2670 9.831737 CTGTTTTTCACCTCAATTTCTATGTAG 57.168 33.333 0.00 0.00 0.00 2.74
2263 2694 1.254026 TAGCCACTCTGTACGCTGTT 58.746 50.000 1.48 0.00 32.76 3.16
2268 2699 3.251571 GAAAGGTTAGCCACTCTGTACG 58.748 50.000 0.00 0.00 37.19 3.67
2269 2700 3.597255 GGAAAGGTTAGCCACTCTGTAC 58.403 50.000 0.00 0.00 37.19 2.90
2346 2781 2.565841 AGCCTCAGTTCTTGACAACAC 58.434 47.619 0.00 0.00 0.00 3.32
2349 2784 3.281727 ACAAGCCTCAGTTCTTGACAA 57.718 42.857 10.03 0.00 41.50 3.18
2351 2786 4.378874 GCATTACAAGCCTCAGTTCTTGAC 60.379 45.833 10.03 0.00 41.50 3.18
2359 2794 4.156664 GCATATGCATTACAAGCCTCAG 57.843 45.455 22.84 0.00 41.59 3.35
2430 2865 1.311651 GCTCCTCCAGCTTTTCCTGC 61.312 60.000 0.00 0.00 45.83 4.85
2499 2934 7.751768 AGAAAGGAAAAGGAAAGATGTAGTG 57.248 36.000 0.00 0.00 0.00 2.74
2557 2998 8.620533 AAAGCTGCATTATCGAAATTAAGAAC 57.379 30.769 1.02 0.00 0.00 3.01
2761 3204 1.006832 AGATTTCCGTTCGCAATCCG 58.993 50.000 9.90 0.00 38.61 4.18
3024 3468 9.892130 CCAAAGTAAGACATTAAGGTTCTAGAT 57.108 33.333 0.00 0.00 0.00 1.98
3160 3605 4.915704 TCAGTAGAACCGCAAAAACAAAG 58.084 39.130 0.00 0.00 0.00 2.77
3274 3719 2.369860 GGGAGACAGTATCATGCCATCA 59.630 50.000 0.00 0.00 0.00 3.07
3316 3762 9.903682 ATAATAAGATATTCATGTTTGCACTGC 57.096 29.630 0.00 0.00 0.00 4.40
3381 3835 5.636121 AGAAATGTGCATAGTAACGAAACGA 59.364 36.000 0.00 0.00 0.00 3.85
3382 3836 5.854157 AGAAATGTGCATAGTAACGAAACG 58.146 37.500 0.00 0.00 0.00 3.60
3383 3837 6.827641 TGAGAAATGTGCATAGTAACGAAAC 58.172 36.000 0.00 0.00 0.00 2.78
3384 3838 7.428282 TTGAGAAATGTGCATAGTAACGAAA 57.572 32.000 0.00 0.00 0.00 3.46
3385 3839 7.428282 TTTGAGAAATGTGCATAGTAACGAA 57.572 32.000 0.00 0.00 0.00 3.85
3394 3848 6.734137 TCGTTAGTTTTTGAGAAATGTGCAT 58.266 32.000 0.00 0.00 0.00 3.96
3410 3864 5.707411 AAATAGCGCGTTATTCGTTAGTT 57.293 34.783 25.29 8.11 42.13 2.24
3423 3877 6.244999 TCTGTTACACAATTTAAATAGCGCG 58.755 36.000 0.00 0.00 0.00 6.86
3448 3902 4.948004 GCCAAGGCTTTACCACTAATAGTT 59.052 41.667 3.29 0.00 43.14 2.24
3455 3909 1.971695 GCGCCAAGGCTTTACCACT 60.972 57.895 9.73 0.00 43.14 4.00
3456 3910 2.200170 CTGCGCCAAGGCTTTACCAC 62.200 60.000 4.18 0.00 43.14 4.16
3457 3911 1.971167 CTGCGCCAAGGCTTTACCA 60.971 57.895 4.18 0.00 43.14 3.25
3458 3912 1.971695 ACTGCGCCAAGGCTTTACC 60.972 57.895 4.18 0.00 39.32 2.85
3459 3913 1.210155 CACTGCGCCAAGGCTTTAC 59.790 57.895 4.18 0.00 39.32 2.01
3460 3914 1.971167 CCACTGCGCCAAGGCTTTA 60.971 57.895 4.18 0.00 39.32 1.85
3461 3915 2.690653 TACCACTGCGCCAAGGCTTT 62.691 55.000 4.18 0.00 39.32 3.51
3462 3916 2.690653 TTACCACTGCGCCAAGGCTT 62.691 55.000 4.18 0.00 39.32 4.35
3463 3917 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
3464 3918 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
3465 3919 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
3466 3920 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
3467 3921 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
3468 3922 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
3469 3923 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
3473 3927 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
3474 3928 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
3475 3929 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
3476 3930 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
3477 3931 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
3478 3932 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
3479 3933 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
3480 3934 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
3481 3935 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
3482 3936 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
3483 3937 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
3484 3938 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
3485 3939 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
3486 3940 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
3487 3941 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
3488 3942 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
3499 3953 1.270839 ACTTGAACCCGTGACCTCATG 60.271 52.381 0.00 0.00 0.00 3.07
3500 3954 1.002087 GACTTGAACCCGTGACCTCAT 59.998 52.381 0.00 0.00 0.00 2.90
3501 3955 0.391597 GACTTGAACCCGTGACCTCA 59.608 55.000 0.00 0.00 0.00 3.86
3502 3956 0.320508 GGACTTGAACCCGTGACCTC 60.321 60.000 0.00 0.00 0.00 3.85
3503 3957 0.763223 AGGACTTGAACCCGTGACCT 60.763 55.000 0.00 0.00 0.00 3.85
3504 3958 0.602905 CAGGACTTGAACCCGTGACC 60.603 60.000 0.00 0.00 0.00 4.02
3505 3959 0.602905 CCAGGACTTGAACCCGTGAC 60.603 60.000 0.00 0.00 0.00 3.67
3506 3960 0.761323 TCCAGGACTTGAACCCGTGA 60.761 55.000 0.00 0.00 0.00 4.35
3507 3961 0.107831 TTCCAGGACTTGAACCCGTG 59.892 55.000 0.00 0.00 0.00 4.94
3508 3962 0.841289 TTTCCAGGACTTGAACCCGT 59.159 50.000 0.00 0.00 0.00 5.28
3509 3963 1.235724 GTTTCCAGGACTTGAACCCG 58.764 55.000 0.00 0.00 0.00 5.28
3510 3964 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
3511 3965 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
3512 3966 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
3513 3967 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
3514 3968 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
3515 3969 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
3516 3970 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
3517 3971 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
3518 3972 2.038557 TGTAAGAGGCTGTTTCCAGGAC 59.961 50.000 0.90 0.00 39.22 3.85
3519 3973 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
3520 3974 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
3521 3975 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
3533 3987 7.103641 CAGCCTTTACCTACATTTCTGTAAGA 58.896 38.462 0.00 0.00 44.68 2.10
3534 3988 6.183360 GCAGCCTTTACCTACATTTCTGTAAG 60.183 42.308 0.00 0.00 37.41 2.34
3535 3989 5.646360 GCAGCCTTTACCTACATTTCTGTAA 59.354 40.000 0.00 0.00 37.41 2.41
3536 3990 5.183228 GCAGCCTTTACCTACATTTCTGTA 58.817 41.667 0.00 0.00 36.79 2.74
3537 3991 4.010349 GCAGCCTTTACCTACATTTCTGT 58.990 43.478 0.00 0.00 39.49 3.41
3538 3992 3.063997 CGCAGCCTTTACCTACATTTCTG 59.936 47.826 0.00 0.00 0.00 3.02
3539 3993 3.270877 CGCAGCCTTTACCTACATTTCT 58.729 45.455 0.00 0.00 0.00 2.52
3540 3994 3.007635 ACGCAGCCTTTACCTACATTTC 58.992 45.455 0.00 0.00 0.00 2.17
3541 3995 3.067684 ACGCAGCCTTTACCTACATTT 57.932 42.857 0.00 0.00 0.00 2.32
3542 3996 2.781681 ACGCAGCCTTTACCTACATT 57.218 45.000 0.00 0.00 0.00 2.71
3543 3997 2.764572 AGTACGCAGCCTTTACCTACAT 59.235 45.455 0.00 0.00 0.00 2.29
3544 3998 2.173519 AGTACGCAGCCTTTACCTACA 58.826 47.619 0.00 0.00 0.00 2.74
3545 3999 2.955477 AGTACGCAGCCTTTACCTAC 57.045 50.000 0.00 0.00 0.00 3.18
3546 4000 5.471456 GTCTATAGTACGCAGCCTTTACCTA 59.529 44.000 0.00 0.00 0.00 3.08
3547 4001 4.277921 GTCTATAGTACGCAGCCTTTACCT 59.722 45.833 0.00 0.00 0.00 3.08
3548 4002 4.544651 GTCTATAGTACGCAGCCTTTACC 58.455 47.826 0.00 0.00 0.00 2.85
3549 4003 4.544651 GGTCTATAGTACGCAGCCTTTAC 58.455 47.826 0.00 0.00 0.00 2.01
3550 4004 3.571401 GGGTCTATAGTACGCAGCCTTTA 59.429 47.826 0.00 0.00 0.00 1.85
3551 4005 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
3552 4006 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
3553 4007 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
3554 4008 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
3555 4009 3.447918 TTTGGGTCTATAGTACGCAGC 57.552 47.619 16.00 2.07 40.36 5.25
3556 4010 4.750098 CCATTTTGGGTCTATAGTACGCAG 59.250 45.833 16.00 9.06 40.36 5.18
3557 4011 4.162698 ACCATTTTGGGTCTATAGTACGCA 59.837 41.667 13.98 13.98 43.37 5.24
3558 4012 4.700700 ACCATTTTGGGTCTATAGTACGC 58.299 43.478 0.00 6.13 43.37 4.42
3569 4023 1.076014 GGGTCCGACCATTTTGGGT 59.924 57.895 19.43 0.00 43.37 4.51
3570 4024 0.251608 AAGGGTCCGACCATTTTGGG 60.252 55.000 19.43 0.00 39.55 4.12
3571 4025 1.173913 GAAGGGTCCGACCATTTTGG 58.826 55.000 18.14 0.00 43.04 3.28
3572 4026 1.173913 GGAAGGGTCCGACCATTTTG 58.826 55.000 18.14 0.00 43.04 2.44
3573 4027 0.039180 GGGAAGGGTCCGACCATTTT 59.961 55.000 18.14 9.49 43.04 1.82
3574 4028 1.689412 GGGAAGGGTCCGACCATTT 59.311 57.895 18.14 11.86 43.04 2.32
3575 4029 2.306384 GGGGAAGGGTCCGACCATT 61.306 63.158 17.19 17.19 46.04 3.16
3576 4030 2.691252 GGGGAAGGGTCCGACCAT 60.691 66.667 19.43 9.67 46.04 3.55
3583 4037 4.735599 AGGGTCCGGGGAAGGGTC 62.736 72.222 0.00 0.00 0.00 4.46
3599 4053 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
3602 4056 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
3603 4057 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
3604 4058 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
3605 4059 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
3611 4065 2.897350 GCCCGGTGCATGTAGCTC 60.897 66.667 11.25 0.00 45.94 4.09
3612 4066 3.402681 AGCCCGGTGCATGTAGCT 61.403 61.111 15.92 4.82 45.94 3.32
3613 4067 3.204827 CAGCCCGGTGCATGTAGC 61.205 66.667 15.92 2.56 44.83 3.58
3614 4068 3.204827 GCAGCCCGGTGCATGTAG 61.205 66.667 13.70 0.91 43.41 2.74
3615 4069 4.794648 GGCAGCCCGGTGCATGTA 62.795 66.667 19.47 0.00 45.93 2.29
3641 4095 8.512138 GCATGGTCACAACTTTACTAATAGTTT 58.488 33.333 0.00 0.00 32.50 2.66
3642 4096 7.663905 TGCATGGTCACAACTTTACTAATAGTT 59.336 33.333 0.00 0.00 35.06 2.24
3643 4097 7.165485 TGCATGGTCACAACTTTACTAATAGT 58.835 34.615 0.00 0.00 0.00 2.12
3644 4098 7.609760 TGCATGGTCACAACTTTACTAATAG 57.390 36.000 0.00 0.00 0.00 1.73
3645 4099 7.987750 TTGCATGGTCACAACTTTACTAATA 57.012 32.000 0.00 0.00 0.00 0.98
3646 4100 6.892658 TTGCATGGTCACAACTTTACTAAT 57.107 33.333 0.00 0.00 0.00 1.73
3647 4101 6.701145 TTTGCATGGTCACAACTTTACTAA 57.299 33.333 0.00 0.00 0.00 2.24
3648 4102 6.892658 ATTTGCATGGTCACAACTTTACTA 57.107 33.333 0.00 0.00 0.00 1.82
3649 4103 5.789643 ATTTGCATGGTCACAACTTTACT 57.210 34.783 0.00 0.00 0.00 2.24
3818 4307 8.703336 GTTCAGAAGCAAAATTCCTTTATTGAC 58.297 33.333 0.00 0.00 0.00 3.18
3819 4308 8.420222 TGTTCAGAAGCAAAATTCCTTTATTGA 58.580 29.630 0.00 0.00 0.00 2.57
3820 4309 8.592105 TGTTCAGAAGCAAAATTCCTTTATTG 57.408 30.769 0.00 0.00 0.00 1.90
3821 4310 9.783081 AATGTTCAGAAGCAAAATTCCTTTATT 57.217 25.926 0.00 0.00 0.00 1.40
3822 4311 9.428097 GAATGTTCAGAAGCAAAATTCCTTTAT 57.572 29.630 0.00 0.00 0.00 1.40
3823 4312 7.872483 GGAATGTTCAGAAGCAAAATTCCTTTA 59.128 33.333 7.95 0.00 38.89 1.85
3824 4313 6.707608 GGAATGTTCAGAAGCAAAATTCCTTT 59.292 34.615 7.95 0.00 38.89 3.11
3825 4314 6.183360 TGGAATGTTCAGAAGCAAAATTCCTT 60.183 34.615 13.87 0.00 41.32 3.36
3826 4315 5.305128 TGGAATGTTCAGAAGCAAAATTCCT 59.695 36.000 13.87 0.00 41.32 3.36
3827 4316 5.540911 TGGAATGTTCAGAAGCAAAATTCC 58.459 37.500 8.19 8.19 41.19 3.01
3828 4317 7.057149 CATGGAATGTTCAGAAGCAAAATTC 57.943 36.000 0.00 0.00 40.20 2.17
3867 4356 9.535878 GGTGGTTAATGTTGAAATTTACAAAGA 57.464 29.630 0.00 0.00 0.00 2.52
3868 4357 9.319143 TGGTGGTTAATGTTGAAATTTACAAAG 57.681 29.630 0.00 0.00 0.00 2.77
3971 4461 1.135053 CATGGATGCAACGCCATTCAA 60.135 47.619 14.33 0.00 42.03 2.69
4041 4535 7.148154 CCAGAATACCAACTAGAGGAGATATCG 60.148 44.444 11.98 0.00 0.00 2.92
4067 4561 8.404765 GTTAGATACCAACTCAACTACTACTCC 58.595 40.741 0.00 0.00 0.00 3.85
4068 4562 8.954350 TGTTAGATACCAACTCAACTACTACTC 58.046 37.037 0.00 0.00 0.00 2.59
4121 4850 9.162764 TCTATTTATTTTGAGGCTTGTACTGAC 57.837 33.333 0.00 0.00 0.00 3.51
4209 4938 5.888161 CCTGCTAAATGTTATCAAGGTTCCT 59.112 40.000 0.00 0.00 0.00 3.36
4257 4986 9.337396 TGCCTCTATATTGGTTACAAATAACTG 57.663 33.333 0.00 0.00 40.59 3.16
4260 4989 8.832521 CGTTGCCTCTATATTGGTTACAAATAA 58.167 33.333 0.00 0.00 40.55 1.40
4459 5217 9.434559 GCTGGAATATGTTTAGATAACGAAAAC 57.565 33.333 0.00 0.00 34.45 2.43
4464 5222 7.072030 GCAAGCTGGAATATGTTTAGATAACG 58.928 38.462 0.00 0.00 0.00 3.18
4527 5390 9.090103 CCTGATTAACACCCTATCAGATAGTAA 57.910 37.037 15.19 7.93 45.09 2.24
4560 5423 8.533569 AGGAAATACCATTTTCGTAAATCCAT 57.466 30.769 0.00 0.00 42.04 3.41
4748 5612 3.955471 ACCTGCTGTACATACAAGCAAT 58.045 40.909 7.96 0.00 38.70 3.56
4749 5613 3.417069 ACCTGCTGTACATACAAGCAA 57.583 42.857 7.96 0.00 38.70 3.91
4750 5614 3.417069 AACCTGCTGTACATACAAGCA 57.583 42.857 6.57 6.57 37.71 3.91
4751 5615 4.693566 TGTAAACCTGCTGTACATACAAGC 59.306 41.667 0.00 0.00 35.50 4.01
4785 5651 3.868077 CGAGATCTGAGAAAATGTGGGAC 59.132 47.826 0.00 0.00 0.00 4.46
4882 5759 0.036590 TGTCAATGCCACTGCTGCTA 59.963 50.000 0.00 0.00 38.71 3.49
4963 5840 1.153369 ATGTCGGATGTTGGAGGCG 60.153 57.895 0.00 0.00 0.00 5.52
4976 5853 2.453080 GCATGTAACATTGCCATGTCG 58.547 47.619 3.56 0.00 43.34 4.35
5068 5945 1.151668 GGATGCGAAGGATTGGATCG 58.848 55.000 0.00 0.00 40.04 3.69
5212 6089 3.965660 GGAGACGGGATAAGGGCA 58.034 61.111 0.00 0.00 0.00 5.36
5250 6127 1.136828 ACAAGGGTAGTGTCCAAGCA 58.863 50.000 0.00 0.00 0.00 3.91
5251 6128 1.523758 CACAAGGGTAGTGTCCAAGC 58.476 55.000 0.00 0.00 32.44 4.01
5254 6131 1.053424 GTCCACAAGGGTAGTGTCCA 58.947 55.000 0.00 0.00 38.11 4.02
5364 6241 0.528470 GACTGAGAGGTAAGCACGCT 59.472 55.000 0.00 0.00 0.00 5.07
5500 6377 2.047655 GTGACGATGGCCAACCGA 60.048 61.111 29.72 11.77 39.70 4.69
5512 6389 0.040157 CAGTGGTGGCATTTGTGACG 60.040 55.000 0.00 0.00 0.00 4.35
5761 6638 0.036164 CATGGAACTGGTGAACCGGA 59.964 55.000 9.46 0.00 45.36 5.14
5788 6665 3.565214 TTCTGCACCCCGAAGCCA 61.565 61.111 0.00 0.00 0.00 4.75
5824 6701 1.069636 CGTGCAAGAAGCTCCTCAAAC 60.070 52.381 0.00 0.00 45.94 2.93
5866 6743 1.622449 CCTATCCTCAGGTGGGTGTCA 60.622 57.143 0.00 0.00 0.00 3.58
5914 6791 1.611851 CTCACCACCCCTCAGCTCT 60.612 63.158 0.00 0.00 0.00 4.09
6324 7202 7.654022 AGAAAAGAATAACAAACACTTCCCA 57.346 32.000 0.00 0.00 0.00 4.37
6385 7263 4.281657 ACAAGGACAGAAAGAAAAAGCCT 58.718 39.130 0.00 0.00 0.00 4.58
6386 7264 4.499865 GGACAAGGACAGAAAGAAAAAGCC 60.500 45.833 0.00 0.00 0.00 4.35
6387 7265 4.097892 TGGACAAGGACAGAAAGAAAAAGC 59.902 41.667 0.00 0.00 0.00 3.51
6388 7266 5.358160 ACTGGACAAGGACAGAAAGAAAAAG 59.642 40.000 0.00 0.00 38.09 2.27
6389 7267 5.125417 CACTGGACAAGGACAGAAAGAAAAA 59.875 40.000 0.00 0.00 38.09 1.94
6465 7359 6.206498 CACTTGATGGCATTCACATTCATAG 58.794 40.000 0.00 0.00 0.00 2.23
6518 7412 9.586435 TTATGAGATTGGCATATTATACGACAG 57.414 33.333 0.00 0.00 0.00 3.51
6528 7422 9.976511 CAAACTTGAATTATGAGATTGGCATAT 57.023 29.630 0.00 0.00 0.00 1.78
6529 7423 9.187996 TCAAACTTGAATTATGAGATTGGCATA 57.812 29.630 0.00 0.00 33.55 3.14
6530 7424 8.070034 TCAAACTTGAATTATGAGATTGGCAT 57.930 30.769 0.00 0.00 33.55 4.40
6531 7425 7.394077 TCTCAAACTTGAATTATGAGATTGGCA 59.606 33.333 0.00 0.00 41.01 4.92
6532 7426 7.765307 TCTCAAACTTGAATTATGAGATTGGC 58.235 34.615 0.00 0.00 41.01 4.52
6533 7427 9.565213 GTTCTCAAACTTGAATTATGAGATTGG 57.435 33.333 4.79 0.00 44.16 3.16
6568 7462 2.436646 CATGTCGGTGGGGCACTC 60.437 66.667 0.00 0.00 34.40 3.51
6617 7512 2.356313 CCTCGTGCACGTTGCTCT 60.356 61.111 35.74 0.00 45.31 4.09
6630 7525 7.978982 AGATGATTGTTTATGAAACTTCCTCG 58.021 34.615 3.92 0.00 41.90 4.63
6674 7581 9.150348 GTGGCACTAAACTTGCATAAAAATAAT 57.850 29.630 11.13 0.00 42.12 1.28
6685 7592 5.768317 TCAAAATAGTGGCACTAAACTTGC 58.232 37.500 29.35 0.00 33.89 4.01
6821 7728 2.225458 AAATGCATTTTTGGCGCGCG 62.225 50.000 28.44 28.44 0.00 6.86
6868 7775 6.597672 GTGGGTGTGACAATGAACATATCTTA 59.402 38.462 0.00 0.00 0.00 2.10
6870 7777 4.943705 GTGGGTGTGACAATGAACATATCT 59.056 41.667 0.00 0.00 0.00 1.98
6872 7779 4.661222 TGTGGGTGTGACAATGAACATAT 58.339 39.130 0.00 0.00 0.00 1.78
6873 7780 4.092116 TGTGGGTGTGACAATGAACATA 57.908 40.909 0.00 0.00 0.00 2.29
6874 7781 2.942804 TGTGGGTGTGACAATGAACAT 58.057 42.857 0.00 0.00 0.00 2.71
7104 8014 9.932699 CAAATTTGTTGCATTAGATTTGTCAAA 57.067 25.926 10.15 0.00 32.62 2.69
7153 8063 7.133133 ACTTCAAGTTCTACCTTTGTCCTAA 57.867 36.000 0.00 0.00 0.00 2.69
7155 8065 5.632034 ACTTCAAGTTCTACCTTTGTCCT 57.368 39.130 0.00 0.00 0.00 3.85
7156 8066 7.981102 ATTACTTCAAGTTCTACCTTTGTCC 57.019 36.000 0.00 0.00 0.00 4.02
7158 8068 7.996644 TCCAATTACTTCAAGTTCTACCTTTGT 59.003 33.333 0.00 0.00 0.00 2.83
7159 8069 8.391075 TCCAATTACTTCAAGTTCTACCTTTG 57.609 34.615 0.00 0.00 0.00 2.77
7160 8070 8.847196 GTTCCAATTACTTCAAGTTCTACCTTT 58.153 33.333 0.00 0.00 0.00 3.11
7161 8071 7.447545 GGTTCCAATTACTTCAAGTTCTACCTT 59.552 37.037 0.00 0.00 0.00 3.50
7162 8072 6.940867 GGTTCCAATTACTTCAAGTTCTACCT 59.059 38.462 0.00 0.00 0.00 3.08
7163 8073 6.128363 CGGTTCCAATTACTTCAAGTTCTACC 60.128 42.308 0.00 0.00 0.00 3.18
7164 8074 6.647895 TCGGTTCCAATTACTTCAAGTTCTAC 59.352 38.462 0.00 0.00 0.00 2.59
7165 8075 6.761312 TCGGTTCCAATTACTTCAAGTTCTA 58.239 36.000 0.00 0.00 0.00 2.10
7166 8076 5.617252 TCGGTTCCAATTACTTCAAGTTCT 58.383 37.500 0.00 0.00 0.00 3.01
7167 8077 5.106673 CCTCGGTTCCAATTACTTCAAGTTC 60.107 44.000 0.00 0.00 0.00 3.01
7168 8078 4.760204 CCTCGGTTCCAATTACTTCAAGTT 59.240 41.667 0.00 0.00 0.00 2.66
7169 8079 4.324267 CCTCGGTTCCAATTACTTCAAGT 58.676 43.478 0.00 0.00 0.00 3.16
7170 8080 3.689649 CCCTCGGTTCCAATTACTTCAAG 59.310 47.826 0.00 0.00 0.00 3.02
7171 8081 3.328343 TCCCTCGGTTCCAATTACTTCAA 59.672 43.478 0.00 0.00 0.00 2.69
7172 8082 2.907696 TCCCTCGGTTCCAATTACTTCA 59.092 45.455 0.00 0.00 0.00 3.02
7173 8083 3.055312 ACTCCCTCGGTTCCAATTACTTC 60.055 47.826 0.00 0.00 0.00 3.01
7174 8084 2.910977 ACTCCCTCGGTTCCAATTACTT 59.089 45.455 0.00 0.00 0.00 2.24
7175 8085 2.547990 ACTCCCTCGGTTCCAATTACT 58.452 47.619 0.00 0.00 0.00 2.24
7176 8086 3.196254 TGTACTCCCTCGGTTCCAATTAC 59.804 47.826 0.00 0.00 0.00 1.89
7177 8087 3.443052 TGTACTCCCTCGGTTCCAATTA 58.557 45.455 0.00 0.00 0.00 1.40
7178 8088 2.262637 TGTACTCCCTCGGTTCCAATT 58.737 47.619 0.00 0.00 0.00 2.32
7179 8089 1.946984 TGTACTCCCTCGGTTCCAAT 58.053 50.000 0.00 0.00 0.00 3.16
7180 8090 1.719529 TTGTACTCCCTCGGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
7181 8091 1.345415 GTTTGTACTCCCTCGGTTCCA 59.655 52.381 0.00 0.00 0.00 3.53
7182 8092 1.338484 GGTTTGTACTCCCTCGGTTCC 60.338 57.143 0.00 0.00 0.00 3.62
7183 8093 1.622312 AGGTTTGTACTCCCTCGGTTC 59.378 52.381 0.00 0.00 0.00 3.62
7184 8094 1.725803 AGGTTTGTACTCCCTCGGTT 58.274 50.000 0.00 0.00 0.00 4.44
7185 8095 1.346722 CAAGGTTTGTACTCCCTCGGT 59.653 52.381 0.00 0.00 0.00 4.69
7186 8096 2.094762 CAAGGTTTGTACTCCCTCGG 57.905 55.000 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.