Multiple sequence alignment - TraesCS5B01G175000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G175000 | chr5B | 100.000 | 5078 | 0 | 0 | 1 | 5078 | 321213744 | 321218821 | 0.000000e+00 | 9378.0 |
1 | TraesCS5B01G175000 | chr5B | 87.467 | 383 | 28 | 11 | 125 | 490 | 651230046 | 651229667 | 1.690000e-114 | 424.0 |
2 | TraesCS5B01G175000 | chr5B | 93.194 | 191 | 10 | 3 | 2479 | 2669 | 510419113 | 510419300 | 1.390000e-70 | 278.0 |
3 | TraesCS5B01G175000 | chr5B | 95.789 | 95 | 4 | 0 | 4390 | 4484 | 321217899 | 321217993 | 2.450000e-33 | 154.0 |
4 | TraesCS5B01G175000 | chr5B | 95.789 | 95 | 4 | 0 | 4156 | 4250 | 321218133 | 321218227 | 2.450000e-33 | 154.0 |
5 | TraesCS5B01G175000 | chr5B | 98.077 | 52 | 1 | 0 | 4257 | 4308 | 321217849 | 321217900 | 1.950000e-14 | 91.6 |
6 | TraesCS5B01G175000 | chr5B | 98.077 | 52 | 1 | 0 | 4106 | 4157 | 321218000 | 321218051 | 1.950000e-14 | 91.6 |
7 | TraesCS5B01G175000 | chr5B | 88.235 | 68 | 5 | 3 | 5013 | 5078 | 162965577 | 162965643 | 1.520000e-10 | 78.7 |
8 | TraesCS5B01G175000 | chr5B | 87.500 | 72 | 4 | 5 | 333 | 404 | 658777640 | 658777574 | 1.520000e-10 | 78.7 |
9 | TraesCS5B01G175000 | chr5B | 95.745 | 47 | 2 | 0 | 2338 | 2384 | 20027396 | 20027442 | 5.450000e-10 | 76.8 |
10 | TraesCS5B01G175000 | chr5B | 93.750 | 48 | 2 | 1 | 2338 | 2384 | 16100145 | 16100098 | 2.540000e-08 | 71.3 |
11 | TraesCS5B01G175000 | chr5D | 93.652 | 961 | 48 | 9 | 3396 | 4347 | 283010883 | 283011839 | 0.000000e+00 | 1424.0 |
12 | TraesCS5B01G175000 | chr5D | 94.811 | 636 | 19 | 7 | 889 | 1517 | 283008449 | 283009077 | 0.000000e+00 | 979.0 |
13 | TraesCS5B01G175000 | chr5D | 90.082 | 736 | 34 | 10 | 4312 | 5038 | 283011843 | 283012548 | 0.000000e+00 | 918.0 |
14 | TraesCS5B01G175000 | chr5D | 86.413 | 552 | 55 | 16 | 2859 | 3398 | 283010134 | 283010677 | 2.040000e-163 | 586.0 |
15 | TraesCS5B01G175000 | chr5D | 83.918 | 342 | 32 | 17 | 138 | 460 | 116888141 | 116887804 | 6.390000e-79 | 305.0 |
16 | TraesCS5B01G175000 | chr5D | 80.806 | 422 | 42 | 9 | 84 | 476 | 45506219 | 45506630 | 1.380000e-75 | 294.0 |
17 | TraesCS5B01G175000 | chr5D | 80.282 | 355 | 47 | 13 | 16 | 359 | 312116010 | 312115668 | 3.930000e-61 | 246.0 |
18 | TraesCS5B01G175000 | chr5D | 100.000 | 81 | 0 | 0 | 4170 | 4250 | 283011941 | 283012021 | 3.170000e-32 | 150.0 |
19 | TraesCS5B01G175000 | chr5D | 94.792 | 96 | 4 | 1 | 4390 | 4484 | 283011647 | 283011742 | 1.140000e-31 | 148.0 |
20 | TraesCS5B01G175000 | chr5D | 98.077 | 52 | 1 | 0 | 4106 | 4157 | 283011749 | 283011800 | 1.950000e-14 | 91.6 |
21 | TraesCS5B01G175000 | chr5D | 94.643 | 56 | 3 | 0 | 835 | 890 | 353695615 | 353695560 | 2.520000e-13 | 87.9 |
22 | TraesCS5B01G175000 | chr5A | 92.112 | 748 | 44 | 9 | 1313 | 2054 | 375286730 | 375287468 | 0.000000e+00 | 1040.0 |
23 | TraesCS5B01G175000 | chr5A | 94.083 | 507 | 19 | 4 | 2895 | 3398 | 375288156 | 375288654 | 0.000000e+00 | 760.0 |
24 | TraesCS5B01G175000 | chr5A | 94.683 | 489 | 22 | 3 | 3669 | 4157 | 375289214 | 375289698 | 0.000000e+00 | 756.0 |
25 | TraesCS5B01G175000 | chr5A | 93.932 | 412 | 20 | 3 | 889 | 1297 | 375286266 | 375286675 | 7.220000e-173 | 617.0 |
26 | TraesCS5B01G175000 | chr5A | 91.289 | 287 | 10 | 4 | 3399 | 3670 | 375288833 | 375289119 | 1.330000e-100 | 377.0 |
27 | TraesCS5B01G175000 | chr5A | 85.131 | 343 | 23 | 5 | 4251 | 4591 | 375289642 | 375289958 | 4.900000e-85 | 326.0 |
28 | TraesCS5B01G175000 | chr5A | 88.477 | 243 | 26 | 1 | 2666 | 2908 | 375287870 | 375288110 | 4.970000e-75 | 292.0 |
29 | TraesCS5B01G175000 | chr5A | 96.078 | 102 | 3 | 1 | 4156 | 4256 | 375289779 | 375289880 | 1.130000e-36 | 165.0 |
30 | TraesCS5B01G175000 | chr5A | 95.652 | 92 | 3 | 1 | 4304 | 4394 | 629924962 | 629925053 | 4.100000e-31 | 147.0 |
31 | TraesCS5B01G175000 | chr5A | 91.429 | 105 | 7 | 2 | 4290 | 4392 | 698639622 | 698639726 | 5.300000e-30 | 143.0 |
32 | TraesCS5B01G175000 | chr5A | 83.041 | 171 | 5 | 6 | 4589 | 4759 | 375292316 | 375292462 | 3.190000e-27 | 134.0 |
33 | TraesCS5B01G175000 | chr5A | 91.667 | 84 | 6 | 1 | 2123 | 2206 | 375287478 | 375287560 | 1.160000e-21 | 115.0 |
34 | TraesCS5B01G175000 | chr5A | 94.444 | 54 | 2 | 1 | 5025 | 5078 | 67902292 | 67902344 | 1.170000e-11 | 82.4 |
35 | TraesCS5B01G175000 | chr5A | 100.000 | 41 | 0 | 0 | 5038 | 5078 | 519989218 | 519989178 | 5.450000e-10 | 76.8 |
36 | TraesCS5B01G175000 | chr5A | 90.566 | 53 | 4 | 1 | 2341 | 2393 | 424240300 | 424240351 | 9.120000e-08 | 69.4 |
37 | TraesCS5B01G175000 | chr2B | 82.007 | 917 | 99 | 25 | 3 | 889 | 454028594 | 454027714 | 0.000000e+00 | 719.0 |
38 | TraesCS5B01G175000 | chr2B | 94.624 | 93 | 4 | 1 | 4307 | 4399 | 225436404 | 225436313 | 5.300000e-30 | 143.0 |
39 | TraesCS5B01G175000 | chr3B | 90.496 | 484 | 27 | 8 | 3 | 486 | 164925825 | 164926289 | 5.580000e-174 | 621.0 |
40 | TraesCS5B01G175000 | chr3B | 85.744 | 484 | 50 | 6 | 1 | 467 | 823000422 | 823000903 | 1.270000e-135 | 494.0 |
41 | TraesCS5B01G175000 | chr3B | 89.119 | 386 | 36 | 4 | 511 | 892 | 164926286 | 164926669 | 4.600000e-130 | 475.0 |
42 | TraesCS5B01G175000 | chr3B | 83.155 | 374 | 50 | 9 | 532 | 896 | 416808430 | 416808799 | 3.790000e-86 | 329.0 |
43 | TraesCS5B01G175000 | chr3B | 85.498 | 331 | 30 | 3 | 173 | 486 | 684909337 | 684909008 | 3.790000e-86 | 329.0 |
44 | TraesCS5B01G175000 | chr3B | 82.462 | 325 | 33 | 16 | 172 | 489 | 133393978 | 133393671 | 3.900000e-66 | 263.0 |
45 | TraesCS5B01G175000 | chr3B | 93.333 | 60 | 3 | 1 | 1378 | 1436 | 804987495 | 804987554 | 2.520000e-13 | 87.9 |
46 | TraesCS5B01G175000 | chr3B | 92.857 | 56 | 3 | 1 | 5023 | 5078 | 123344710 | 123344656 | 4.210000e-11 | 80.5 |
47 | TraesCS5B01G175000 | chr3B | 92.857 | 56 | 3 | 1 | 5024 | 5078 | 395170046 | 395169991 | 4.210000e-11 | 80.5 |
48 | TraesCS5B01G175000 | chr3B | 95.455 | 44 | 2 | 0 | 2338 | 2381 | 52355599 | 52355642 | 2.540000e-08 | 71.3 |
49 | TraesCS5B01G175000 | chr7A | 88.780 | 508 | 31 | 14 | 1 | 486 | 148507518 | 148507015 | 2.620000e-167 | 599.0 |
50 | TraesCS5B01G175000 | chr7A | 88.866 | 476 | 35 | 8 | 1 | 460 | 92971285 | 92970812 | 2.050000e-158 | 569.0 |
51 | TraesCS5B01G175000 | chr7A | 82.353 | 136 | 23 | 1 | 757 | 892 | 685204678 | 685204812 | 3.210000e-22 | 117.0 |
52 | TraesCS5B01G175000 | chr7A | 81.818 | 132 | 23 | 1 | 757 | 888 | 502008514 | 502008384 | 5.380000e-20 | 110.0 |
53 | TraesCS5B01G175000 | chr7A | 81.481 | 135 | 22 | 3 | 757 | 890 | 82215765 | 82215897 | 1.930000e-19 | 108.0 |
54 | TraesCS5B01G175000 | chr7A | 100.000 | 40 | 0 | 0 | 5039 | 5078 | 711411227 | 711411188 | 1.960000e-09 | 75.0 |
55 | TraesCS5B01G175000 | chr3A | 88.780 | 508 | 31 | 14 | 1 | 486 | 598330456 | 598329953 | 2.620000e-167 | 599.0 |
56 | TraesCS5B01G175000 | chr3A | 89.474 | 114 | 10 | 2 | 4285 | 4398 | 750351103 | 750350992 | 5.300000e-30 | 143.0 |
57 | TraesCS5B01G175000 | chr3A | 93.478 | 46 | 3 | 0 | 2336 | 2381 | 638288322 | 638288367 | 9.120000e-08 | 69.4 |
58 | TraesCS5B01G175000 | chr1A | 88.780 | 508 | 31 | 14 | 1 | 486 | 32864906 | 32865409 | 2.620000e-167 | 599.0 |
59 | TraesCS5B01G175000 | chr1A | 88.780 | 508 | 31 | 14 | 1 | 486 | 576867392 | 576867895 | 2.620000e-167 | 599.0 |
60 | TraesCS5B01G175000 | chr1A | 86.709 | 316 | 24 | 8 | 106 | 405 | 101330046 | 101329733 | 8.150000e-88 | 335.0 |
61 | TraesCS5B01G175000 | chr1A | 92.135 | 89 | 7 | 0 | 388 | 476 | 101328928 | 101328840 | 5.340000e-25 | 126.0 |
62 | TraesCS5B01G175000 | chr1A | 100.000 | 44 | 0 | 0 | 5035 | 5078 | 374755992 | 374755949 | 1.170000e-11 | 82.4 |
63 | TraesCS5B01G175000 | chr6A | 89.655 | 464 | 30 | 8 | 13 | 460 | 53581625 | 53581164 | 4.410000e-160 | 575.0 |
64 | TraesCS5B01G175000 | chr6A | 93.478 | 46 | 2 | 1 | 2336 | 2380 | 367773943 | 367773898 | 3.280000e-07 | 67.6 |
65 | TraesCS5B01G175000 | chr6A | 77.885 | 104 | 23 | 0 | 3920 | 4023 | 61212529 | 61212632 | 1.180000e-06 | 65.8 |
66 | TraesCS5B01G175000 | chr7B | 80.734 | 763 | 66 | 28 | 172 | 888 | 97678168 | 97678895 | 2.100000e-143 | 520.0 |
67 | TraesCS5B01G175000 | chr7B | 94.118 | 187 | 11 | 0 | 2479 | 2665 | 145817350 | 145817164 | 8.320000e-73 | 285.0 |
68 | TraesCS5B01G175000 | chr7B | 93.651 | 189 | 12 | 0 | 2481 | 2669 | 125853924 | 125854112 | 2.990000e-72 | 283.0 |
69 | TraesCS5B01G175000 | chr7B | 80.745 | 322 | 27 | 16 | 189 | 479 | 745133749 | 745134066 | 8.560000e-53 | 219.0 |
70 | TraesCS5B01G175000 | chr7B | 83.036 | 112 | 19 | 0 | 782 | 893 | 550659450 | 550659339 | 8.990000e-18 | 102.0 |
71 | TraesCS5B01G175000 | chr7B | 81.513 | 119 | 20 | 2 | 780 | 897 | 75582723 | 75582606 | 4.180000e-16 | 97.1 |
72 | TraesCS5B01G175000 | chr7B | 89.394 | 66 | 4 | 3 | 5014 | 5078 | 402609064 | 402609001 | 4.210000e-11 | 80.5 |
73 | TraesCS5B01G175000 | chr2D | 93.248 | 311 | 19 | 2 | 1 | 311 | 318691292 | 318691600 | 1.670000e-124 | 457.0 |
74 | TraesCS5B01G175000 | chr2D | 81.657 | 507 | 60 | 14 | 1 | 476 | 617332374 | 617331870 | 1.710000e-104 | 390.0 |
75 | TraesCS5B01G175000 | chr2D | 82.707 | 133 | 20 | 3 | 757 | 888 | 578883652 | 578883522 | 1.160000e-21 | 115.0 |
76 | TraesCS5B01G175000 | chr7D | 89.751 | 361 | 17 | 7 | 143 | 487 | 77365969 | 77366325 | 1.300000e-120 | 444.0 |
77 | TraesCS5B01G175000 | chr7D | 97.727 | 88 | 2 | 0 | 4304 | 4391 | 5068173 | 5068086 | 8.810000e-33 | 152.0 |
78 | TraesCS5B01G175000 | chr7D | 81.188 | 101 | 19 | 0 | 798 | 898 | 16314568 | 16314668 | 1.170000e-11 | 82.4 |
79 | TraesCS5B01G175000 | chr7D | 90.741 | 54 | 3 | 2 | 2340 | 2391 | 176575251 | 176575304 | 2.540000e-08 | 71.3 |
80 | TraesCS5B01G175000 | chr3D | 78.095 | 630 | 93 | 24 | 79 | 672 | 570378373 | 570378993 | 1.740000e-94 | 357.0 |
81 | TraesCS5B01G175000 | chr3D | 84.848 | 231 | 29 | 4 | 659 | 889 | 564990472 | 564990248 | 1.420000e-55 | 228.0 |
82 | TraesCS5B01G175000 | chr3D | 93.182 | 44 | 3 | 0 | 2340 | 2383 | 600666408 | 600666365 | 1.180000e-06 | 65.8 |
83 | TraesCS5B01G175000 | chr1B | 89.615 | 260 | 22 | 5 | 1 | 259 | 13186464 | 13186209 | 4.900000e-85 | 326.0 |
84 | TraesCS5B01G175000 | chr1B | 93.048 | 187 | 7 | 6 | 2475 | 2661 | 630724751 | 630724571 | 8.380000e-68 | 268.0 |
85 | TraesCS5B01G175000 | chr1B | 79.259 | 135 | 27 | 1 | 756 | 890 | 357342720 | 357342587 | 5.410000e-15 | 93.5 |
86 | TraesCS5B01G175000 | chr1B | 93.617 | 47 | 2 | 1 | 2340 | 2385 | 7336006 | 7336052 | 9.120000e-08 | 69.4 |
87 | TraesCS5B01G175000 | chr6B | 93.299 | 194 | 10 | 2 | 2479 | 2669 | 688765450 | 688765257 | 2.990000e-72 | 283.0 |
88 | TraesCS5B01G175000 | chr6B | 92.784 | 194 | 11 | 2 | 2479 | 2669 | 157098734 | 157098541 | 1.390000e-70 | 278.0 |
89 | TraesCS5B01G175000 | chr6B | 95.556 | 45 | 2 | 0 | 2338 | 2382 | 662251884 | 662251840 | 7.050000e-09 | 73.1 |
90 | TraesCS5B01G175000 | chr6B | 91.667 | 48 | 4 | 0 | 2333 | 2380 | 156406717 | 156406764 | 3.280000e-07 | 67.6 |
91 | TraesCS5B01G175000 | chr6B | 77.885 | 104 | 23 | 0 | 3920 | 4023 | 117707481 | 117707584 | 1.180000e-06 | 65.8 |
92 | TraesCS5B01G175000 | chr4D | 93.194 | 191 | 12 | 1 | 2479 | 2669 | 10755999 | 10756188 | 3.870000e-71 | 279.0 |
93 | TraesCS5B01G175000 | chr4D | 95.238 | 42 | 2 | 0 | 2340 | 2381 | 16097827 | 16097868 | 3.280000e-07 | 67.6 |
94 | TraesCS5B01G175000 | chr4D | 95.122 | 41 | 2 | 0 | 2340 | 2380 | 367326830 | 367326790 | 1.180000e-06 | 65.8 |
95 | TraesCS5B01G175000 | chr6D | 93.443 | 183 | 12 | 0 | 2479 | 2661 | 291951672 | 291951854 | 6.480000e-69 | 272.0 |
96 | TraesCS5B01G175000 | chr6D | 91.667 | 192 | 16 | 0 | 2478 | 2669 | 63718937 | 63718746 | 3.010000e-67 | 267.0 |
97 | TraesCS5B01G175000 | chr6D | 74.176 | 182 | 45 | 2 | 3878 | 4058 | 53761742 | 53761562 | 1.960000e-09 | 75.0 |
98 | TraesCS5B01G175000 | chr6D | 95.349 | 43 | 2 | 0 | 2340 | 2382 | 24420890 | 24420848 | 9.120000e-08 | 69.4 |
99 | TraesCS5B01G175000 | chr6D | 78.218 | 101 | 22 | 0 | 3923 | 4023 | 53774545 | 53774445 | 1.180000e-06 | 65.8 |
100 | TraesCS5B01G175000 | chr6D | 92.857 | 42 | 3 | 0 | 2338 | 2379 | 16629374 | 16629415 | 1.530000e-05 | 62.1 |
101 | TraesCS5B01G175000 | chr4A | 94.737 | 95 | 3 | 2 | 4304 | 4398 | 577318734 | 577318642 | 4.100000e-31 | 147.0 |
102 | TraesCS5B01G175000 | chr4A | 92.929 | 99 | 7 | 0 | 4297 | 4395 | 556768049 | 556767951 | 1.470000e-30 | 145.0 |
103 | TraesCS5B01G175000 | chr4A | 79.433 | 141 | 26 | 3 | 758 | 897 | 646808549 | 646808687 | 4.180000e-16 | 97.1 |
104 | TraesCS5B01G175000 | chr4A | 95.349 | 43 | 2 | 0 | 2340 | 2382 | 256953391 | 256953349 | 9.120000e-08 | 69.4 |
105 | TraesCS5B01G175000 | chr4A | 92.500 | 40 | 3 | 0 | 398 | 437 | 72878879 | 72878840 | 1.970000e-04 | 58.4 |
106 | TraesCS5B01G175000 | chr4B | 94.444 | 54 | 0 | 3 | 5026 | 5078 | 399629561 | 399629510 | 4.210000e-11 | 80.5 |
107 | TraesCS5B01G175000 | chr4B | 76.190 | 147 | 29 | 5 | 757 | 901 | 567601606 | 567601464 | 7.050000e-09 | 73.1 |
108 | TraesCS5B01G175000 | chrUn | 95.349 | 43 | 2 | 0 | 2338 | 2380 | 207635163 | 207635121 | 9.120000e-08 | 69.4 |
109 | TraesCS5B01G175000 | chrUn | 95.349 | 43 | 2 | 0 | 2338 | 2380 | 400982795 | 400982753 | 9.120000e-08 | 69.4 |
110 | TraesCS5B01G175000 | chrUn | 95.122 | 41 | 2 | 0 | 2341 | 2381 | 365364986 | 365364946 | 1.180000e-06 | 65.8 |
111 | TraesCS5B01G175000 | chr1D | 95.349 | 43 | 2 | 0 | 2340 | 2382 | 388489956 | 388489998 | 9.120000e-08 | 69.4 |
112 | TraesCS5B01G175000 | chr1D | 95.238 | 42 | 2 | 0 | 2340 | 2381 | 325552831 | 325552790 | 3.280000e-07 | 67.6 |
113 | TraesCS5B01G175000 | chr1D | 95.122 | 41 | 2 | 0 | 2340 | 2380 | 104223993 | 104223953 | 1.180000e-06 | 65.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G175000 | chr5B | 321213744 | 321218821 | 5077 | False | 1973.84 | 9378 | 97.546400 | 1 | 5078 | 5 | chr5B.!!$F4 | 5077 |
1 | TraesCS5B01G175000 | chr5D | 283008449 | 283012548 | 4099 | False | 613.80 | 1424 | 93.975286 | 889 | 5038 | 7 | chr5D.!!$F2 | 4149 |
2 | TraesCS5B01G175000 | chr5A | 375286266 | 375292462 | 6196 | False | 458.20 | 1040 | 91.049300 | 889 | 4759 | 10 | chr5A.!!$F5 | 3870 |
3 | TraesCS5B01G175000 | chr2B | 454027714 | 454028594 | 880 | True | 719.00 | 719 | 82.007000 | 3 | 889 | 1 | chr2B.!!$R2 | 886 |
4 | TraesCS5B01G175000 | chr3B | 164925825 | 164926669 | 844 | False | 548.00 | 621 | 89.807500 | 3 | 892 | 2 | chr3B.!!$F5 | 889 |
5 | TraesCS5B01G175000 | chr7A | 148507015 | 148507518 | 503 | True | 599.00 | 599 | 88.780000 | 1 | 486 | 1 | chr7A.!!$R2 | 485 |
6 | TraesCS5B01G175000 | chr3A | 598329953 | 598330456 | 503 | True | 599.00 | 599 | 88.780000 | 1 | 486 | 1 | chr3A.!!$R1 | 485 |
7 | TraesCS5B01G175000 | chr1A | 32864906 | 32865409 | 503 | False | 599.00 | 599 | 88.780000 | 1 | 486 | 1 | chr1A.!!$F1 | 485 |
8 | TraesCS5B01G175000 | chr1A | 576867392 | 576867895 | 503 | False | 599.00 | 599 | 88.780000 | 1 | 486 | 1 | chr1A.!!$F2 | 485 |
9 | TraesCS5B01G175000 | chr1A | 101328840 | 101330046 | 1206 | True | 230.50 | 335 | 89.422000 | 106 | 476 | 2 | chr1A.!!$R2 | 370 |
10 | TraesCS5B01G175000 | chr7B | 97678168 | 97678895 | 727 | False | 520.00 | 520 | 80.734000 | 172 | 888 | 1 | chr7B.!!$F1 | 716 |
11 | TraesCS5B01G175000 | chr2D | 617331870 | 617332374 | 504 | True | 390.00 | 390 | 81.657000 | 1 | 476 | 1 | chr2D.!!$R2 | 475 |
12 | TraesCS5B01G175000 | chr3D | 570378373 | 570378993 | 620 | False | 357.00 | 357 | 78.095000 | 79 | 672 | 1 | chr3D.!!$F1 | 593 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
745 | 1670 | 2.589157 | CCCCCACACGCCTAGTCAA | 61.589 | 63.158 | 0.0 | 0.0 | 0.0 | 3.18 | F |
2081 | 3075 | 0.034960 | GGAAAAGGGGACAGAGCCTC | 60.035 | 60.000 | 0.0 | 0.0 | 0.0 | 4.70 | F |
2541 | 3795 | 0.030504 | CGCACAACAAGCATCCAACA | 59.969 | 50.000 | 0.0 | 0.0 | 0.0 | 3.33 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2522 | 3776 | 0.030504 | TGTTGGATGCTTGTTGTGCG | 59.969 | 50.000 | 0.0 | 0.0 | 0.00 | 5.34 | R |
3430 | 4976 | 0.179004 | ATCGCCCTGTGAAACCAACA | 60.179 | 50.000 | 0.0 | 0.0 | 34.36 | 3.33 | R |
4450 | 6154 | 1.293179 | GGCACCCACAATTTCTGCC | 59.707 | 57.895 | 0.0 | 0.0 | 40.68 | 4.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
486 | 1368 | 8.706492 | TCCGTCGTTATCATTGTTTACTAATT | 57.294 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
601 | 1514 | 9.788960 | CTGCCCTAAATCTTTTTCTGTTAATAC | 57.211 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
610 | 1523 | 7.224297 | TCTTTTTCTGTTAATACTGACAGGCT | 58.776 | 34.615 | 7.51 | 0.00 | 42.67 | 4.58 |
745 | 1670 | 2.589157 | CCCCCACACGCCTAGTCAA | 61.589 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
795 | 1722 | 5.363979 | TGCATTGTATTTGCACGTCTAAA | 57.636 | 34.783 | 0.00 | 0.00 | 44.73 | 1.85 |
796 | 1723 | 5.948588 | TGCATTGTATTTGCACGTCTAAAT | 58.051 | 33.333 | 10.37 | 10.37 | 44.73 | 1.40 |
806 | 1733 | 7.444558 | TTTGCACGTCTAAATCAAGTTTTTC | 57.555 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
809 | 1736 | 6.149633 | GCACGTCTAAATCAAGTTTTTCCAT | 58.850 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
815 | 1742 | 9.750125 | GTCTAAATCAAGTTTTTCCATCACTTT | 57.250 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
833 | 1778 | 7.566760 | TCACTTTGATGTACATCACAACTTT | 57.433 | 32.000 | 33.03 | 14.65 | 46.49 | 2.66 |
870 | 1815 | 9.819267 | GTGACTATTTACCTTAAGTTCTAGCAT | 57.181 | 33.333 | 0.97 | 0.00 | 0.00 | 3.79 |
899 | 1844 | 7.359595 | CGGTGTAATTGACTCTTTGAAAATCA | 58.640 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
902 | 1847 | 9.055248 | GTGTAATTGACTCTTTGAAAATCATCG | 57.945 | 33.333 | 0.00 | 0.00 | 0.00 | 3.84 |
1276 | 2224 | 3.334054 | GGCAGGCACTCTCCCCTT | 61.334 | 66.667 | 0.00 | 0.00 | 34.60 | 3.95 |
1306 | 2254 | 0.179268 | GCAAAGCCGTTACGTGTACG | 60.179 | 55.000 | 15.46 | 15.46 | 46.33 | 3.67 |
1330 | 2318 | 0.246635 | CGAATGAACTGACCTCCCGT | 59.753 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1526 | 2514 | 0.037590 | GTATGTCACCCACTGCCCAA | 59.962 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
1582 | 2570 | 7.484641 | CAGCACAACTACGTTGCATTTTTATAT | 59.515 | 33.333 | 11.43 | 0.00 | 46.20 | 0.86 |
1607 | 2595 | 4.379186 | CCTTGCAAGTTACAGCTGAATCAG | 60.379 | 45.833 | 23.35 | 5.78 | 34.12 | 2.90 |
1659 | 2651 | 7.849804 | ATAGTTACTGTTTAGTGCCTGATTG | 57.150 | 36.000 | 0.00 | 0.00 | 37.78 | 2.67 |
1679 | 2671 | 9.282247 | CTGATTGTATTTTGCAGATCAACTAAC | 57.718 | 33.333 | 0.00 | 0.00 | 33.73 | 2.34 |
1695 | 2687 | 1.002430 | CTAACTGTGCCTGCTCTTCCA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
1701 | 2693 | 2.837591 | TGTGCCTGCTCTTCCAATAGTA | 59.162 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
1702 | 2694 | 3.118629 | TGTGCCTGCTCTTCCAATAGTAG | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
1723 | 2715 | 2.173996 | GTTATTAGGCACTTAGGGGGCA | 59.826 | 50.000 | 2.79 | 0.00 | 41.75 | 5.36 |
1729 | 2721 | 1.271597 | GGCACTTAGGGGGCATATGAG | 60.272 | 57.143 | 6.97 | 0.00 | 0.00 | 2.90 |
1781 | 2773 | 0.670162 | GGATTTGATCATGTGCCCCG | 59.330 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
1795 | 2787 | 0.389757 | GCCCCGTTTTACTTTGGCAA | 59.610 | 50.000 | 0.00 | 0.00 | 38.73 | 4.52 |
1816 | 2808 | 9.748708 | TGGCAATTGATAATATGCTTTTACTTC | 57.251 | 29.630 | 10.34 | 0.00 | 38.79 | 3.01 |
1935 | 2927 | 7.161404 | TGTGTATTCAGATAACTGTCTTGCTT | 58.839 | 34.615 | 0.00 | 0.00 | 43.81 | 3.91 |
1956 | 2948 | 6.493458 | TGCTTCAAGCCTTTTATTTTCCTAGT | 59.507 | 34.615 | 7.01 | 0.00 | 41.51 | 2.57 |
1959 | 2951 | 9.764363 | CTTCAAGCCTTTTATTTTCCTAGTTTT | 57.236 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
1968 | 2960 | 7.754851 | TTATTTTCCTAGTTTTGTGGGAGAC | 57.245 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1984 | 2978 | 0.753262 | AGACTGCTCCGTGTTGAGTT | 59.247 | 50.000 | 0.00 | 0.00 | 34.74 | 3.01 |
1991 | 2985 | 2.494059 | CTCCGTGTTGAGTTGAATGGT | 58.506 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
2009 | 3003 | 0.447801 | GTGACAGTATGCTTTGGCGG | 59.552 | 55.000 | 0.00 | 0.00 | 42.53 | 6.13 |
2013 | 3007 | 1.278127 | ACAGTATGCTTTGGCGGTACT | 59.722 | 47.619 | 0.00 | 0.00 | 42.53 | 2.73 |
2022 | 3016 | 2.279935 | TTGGCGGTACTGAATTTGGT | 57.720 | 45.000 | 5.68 | 0.00 | 0.00 | 3.67 |
2026 | 3020 | 4.444536 | TGGCGGTACTGAATTTGGTATAC | 58.555 | 43.478 | 5.68 | 0.00 | 0.00 | 1.47 |
2027 | 3021 | 3.492011 | GGCGGTACTGAATTTGGTATACG | 59.508 | 47.826 | 5.68 | 10.92 | 0.00 | 3.06 |
2028 | 3022 | 4.362279 | GCGGTACTGAATTTGGTATACGA | 58.638 | 43.478 | 5.68 | 0.00 | 0.00 | 3.43 |
2054 | 3048 | 9.071276 | AGTGATCAGATGAAAGTAAAACATGTT | 57.929 | 29.630 | 4.92 | 4.92 | 0.00 | 2.71 |
2055 | 3049 | 9.683069 | GTGATCAGATGAAAGTAAAACATGTTT | 57.317 | 29.630 | 18.13 | 18.13 | 0.00 | 2.83 |
2078 | 3072 | 1.995376 | TTTGGAAAAGGGGACAGAGC | 58.005 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2079 | 3073 | 0.112412 | TTGGAAAAGGGGACAGAGCC | 59.888 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2080 | 3074 | 0.772124 | TGGAAAAGGGGACAGAGCCT | 60.772 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
2081 | 3075 | 0.034960 | GGAAAAGGGGACAGAGCCTC | 60.035 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2082 | 3076 | 0.034960 | GAAAAGGGGACAGAGCCTCC | 60.035 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2083 | 3077 | 1.842381 | AAAAGGGGACAGAGCCTCCG | 61.842 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2084 | 3078 | 4.787280 | AGGGGACAGAGCCTCCGG | 62.787 | 72.222 | 0.00 | 0.00 | 0.00 | 5.14 |
2094 | 3088 | 4.925861 | GCCTCCGGCCTCTGCATC | 62.926 | 72.222 | 0.00 | 0.00 | 44.06 | 3.91 |
2095 | 3089 | 3.473647 | CCTCCGGCCTCTGCATCA | 61.474 | 66.667 | 0.00 | 0.00 | 40.13 | 3.07 |
2096 | 3090 | 2.586245 | CTCCGGCCTCTGCATCAA | 59.414 | 61.111 | 0.00 | 0.00 | 40.13 | 2.57 |
2097 | 3091 | 1.078214 | CTCCGGCCTCTGCATCAAA | 60.078 | 57.895 | 0.00 | 0.00 | 40.13 | 2.69 |
2098 | 3092 | 0.465097 | CTCCGGCCTCTGCATCAAAT | 60.465 | 55.000 | 0.00 | 0.00 | 40.13 | 2.32 |
2099 | 3093 | 0.464373 | TCCGGCCTCTGCATCAAATC | 60.464 | 55.000 | 0.00 | 0.00 | 40.13 | 2.17 |
2100 | 3094 | 1.645455 | CGGCCTCTGCATCAAATCG | 59.355 | 57.895 | 0.00 | 0.00 | 40.13 | 3.34 |
2101 | 3095 | 0.811219 | CGGCCTCTGCATCAAATCGA | 60.811 | 55.000 | 0.00 | 0.00 | 40.13 | 3.59 |
2102 | 3096 | 1.602311 | GGCCTCTGCATCAAATCGAT | 58.398 | 50.000 | 0.00 | 0.00 | 40.13 | 3.59 |
2111 | 3105 | 2.051423 | CATCAAATCGATGCATGCAGC | 58.949 | 47.619 | 25.69 | 25.69 | 44.95 | 5.25 |
2112 | 3106 | 0.382873 | TCAAATCGATGCATGCAGCC | 59.617 | 50.000 | 28.76 | 19.54 | 44.83 | 4.85 |
2113 | 3107 | 0.101579 | CAAATCGATGCATGCAGCCA | 59.898 | 50.000 | 28.76 | 18.55 | 44.83 | 4.75 |
2114 | 3108 | 1.037493 | AAATCGATGCATGCAGCCAT | 58.963 | 45.000 | 28.76 | 20.10 | 44.83 | 4.40 |
2115 | 3109 | 0.596577 | AATCGATGCATGCAGCCATC | 59.403 | 50.000 | 28.76 | 18.37 | 44.83 | 3.51 |
2116 | 3110 | 1.574702 | ATCGATGCATGCAGCCATCG | 61.575 | 55.000 | 30.52 | 30.52 | 46.23 | 3.84 |
2117 | 3111 | 3.740513 | GATGCATGCAGCCATCGA | 58.259 | 55.556 | 25.21 | 0.00 | 44.83 | 3.59 |
2118 | 3112 | 1.574925 | GATGCATGCAGCCATCGAG | 59.425 | 57.895 | 25.21 | 0.00 | 44.83 | 4.04 |
2119 | 3113 | 0.883370 | GATGCATGCAGCCATCGAGA | 60.883 | 55.000 | 25.21 | 0.00 | 44.83 | 4.04 |
2120 | 3114 | 0.885150 | ATGCATGCAGCCATCGAGAG | 60.885 | 55.000 | 26.69 | 0.00 | 44.83 | 3.20 |
2121 | 3115 | 2.252346 | GCATGCAGCCATCGAGAGG | 61.252 | 63.158 | 14.21 | 2.43 | 37.23 | 3.69 |
2126 | 3120 | 1.012841 | GCAGCCATCGAGAGGAAAAG | 58.987 | 55.000 | 10.64 | 0.00 | 0.00 | 2.27 |
2151 | 3176 | 8.982723 | AGGCTAGTTCTAATCTTGATGTTTAGA | 58.017 | 33.333 | 0.00 | 0.00 | 36.02 | 2.10 |
2162 | 3187 | 2.375174 | TGATGTTTAGACCTTGGCCAGT | 59.625 | 45.455 | 5.11 | 0.00 | 0.00 | 4.00 |
2192 | 3217 | 7.772757 | TGGAAACAATGGCTTAAACTGAAAAAT | 59.227 | 29.630 | 0.00 | 0.00 | 37.44 | 1.82 |
2224 | 3478 | 0.106868 | TTGCTCTGATCATGCCCTGG | 60.107 | 55.000 | 15.34 | 0.00 | 0.00 | 4.45 |
2231 | 3485 | 3.523157 | TCTGATCATGCCCTGGTCTTTAA | 59.477 | 43.478 | 0.00 | 0.00 | 35.86 | 1.52 |
2232 | 3486 | 4.166725 | TCTGATCATGCCCTGGTCTTTAAT | 59.833 | 41.667 | 0.00 | 0.00 | 35.86 | 1.40 |
2233 | 3487 | 5.369404 | TCTGATCATGCCCTGGTCTTTAATA | 59.631 | 40.000 | 0.00 | 0.00 | 35.86 | 0.98 |
2234 | 3488 | 6.012337 | TGATCATGCCCTGGTCTTTAATAA | 57.988 | 37.500 | 0.00 | 0.00 | 35.86 | 1.40 |
2235 | 3489 | 5.827797 | TGATCATGCCCTGGTCTTTAATAAC | 59.172 | 40.000 | 0.00 | 0.00 | 35.86 | 1.89 |
2236 | 3490 | 5.450818 | TCATGCCCTGGTCTTTAATAACT | 57.549 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
2238 | 3492 | 5.885912 | TCATGCCCTGGTCTTTAATAACTTC | 59.114 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2283 | 3537 | 3.720002 | ACCGGATATTATTGACCAAGGGT | 59.280 | 43.478 | 9.46 | 0.00 | 39.44 | 4.34 |
2383 | 3637 | 5.305569 | CGAAAGCCTTTTTCGGTAAAAAC | 57.694 | 39.130 | 12.72 | 0.00 | 45.17 | 2.43 |
2384 | 3638 | 4.799428 | CGAAAGCCTTTTTCGGTAAAAACA | 59.201 | 37.500 | 12.72 | 0.00 | 45.17 | 2.83 |
2385 | 3639 | 5.288952 | CGAAAGCCTTTTTCGGTAAAAACAA | 59.711 | 36.000 | 12.72 | 0.00 | 45.17 | 2.83 |
2386 | 3640 | 6.183360 | CGAAAGCCTTTTTCGGTAAAAACAAA | 60.183 | 34.615 | 12.72 | 0.00 | 45.17 | 2.83 |
2387 | 3641 | 7.436430 | AAAGCCTTTTTCGGTAAAAACAAAA | 57.564 | 28.000 | 0.00 | 0.00 | 39.16 | 2.44 |
2388 | 3642 | 7.618502 | AAGCCTTTTTCGGTAAAAACAAAAT | 57.381 | 28.000 | 0.00 | 0.00 | 39.16 | 1.82 |
2389 | 3643 | 7.618502 | AGCCTTTTTCGGTAAAAACAAAATT | 57.381 | 28.000 | 0.00 | 0.00 | 39.16 | 1.82 |
2390 | 3644 | 8.719560 | AGCCTTTTTCGGTAAAAACAAAATTA | 57.280 | 26.923 | 0.00 | 0.00 | 39.16 | 1.40 |
2391 | 3645 | 9.332502 | AGCCTTTTTCGGTAAAAACAAAATTAT | 57.667 | 25.926 | 0.00 | 0.00 | 39.16 | 1.28 |
2392 | 3646 | 9.376171 | GCCTTTTTCGGTAAAAACAAAATTATG | 57.624 | 29.630 | 0.00 | 0.00 | 39.16 | 1.90 |
2396 | 3650 | 8.853469 | TTTCGGTAAAAACAAAATTATGTCGT | 57.147 | 26.923 | 0.00 | 0.00 | 31.81 | 4.34 |
2397 | 3651 | 7.839438 | TCGGTAAAAACAAAATTATGTCGTG | 57.161 | 32.000 | 0.00 | 0.00 | 31.81 | 4.35 |
2398 | 3652 | 6.360148 | TCGGTAAAAACAAAATTATGTCGTGC | 59.640 | 34.615 | 0.00 | 0.00 | 31.81 | 5.34 |
2399 | 3653 | 6.142480 | CGGTAAAAACAAAATTATGTCGTGCA | 59.858 | 34.615 | 0.00 | 0.00 | 31.81 | 4.57 |
2405 | 3659 | 9.469807 | AAAACAAAATTATGTCGTGCAATCTTA | 57.530 | 25.926 | 0.00 | 0.00 | 31.81 | 2.10 |
2410 | 3664 | 1.378531 | TGTCGTGCAATCTTATGCCC | 58.621 | 50.000 | 0.00 | 0.00 | 45.83 | 5.36 |
2432 | 3686 | 5.303589 | CCCTCTTCTTACATACGGATTACCA | 59.696 | 44.000 | 0.00 | 0.00 | 35.59 | 3.25 |
2440 | 3694 | 4.638304 | ACATACGGATTACCAGGCAATAC | 58.362 | 43.478 | 0.00 | 0.00 | 35.59 | 1.89 |
2481 | 3735 | 4.729746 | GCAAACGTTATGCCCTAAGCTTAC | 60.730 | 45.833 | 18.64 | 0.00 | 44.23 | 2.34 |
2482 | 3736 | 3.189618 | ACGTTATGCCCTAAGCTTACC | 57.810 | 47.619 | 0.86 | 0.00 | 44.23 | 2.85 |
2483 | 3737 | 2.132762 | CGTTATGCCCTAAGCTTACCG | 58.867 | 52.381 | 0.86 | 0.00 | 44.23 | 4.02 |
2484 | 3738 | 2.223876 | CGTTATGCCCTAAGCTTACCGA | 60.224 | 50.000 | 0.86 | 0.00 | 38.70 | 4.69 |
2485 | 3739 | 3.738899 | CGTTATGCCCTAAGCTTACCGAA | 60.739 | 47.826 | 0.86 | 0.00 | 38.70 | 4.30 |
2486 | 3740 | 4.193865 | GTTATGCCCTAAGCTTACCGAAA | 58.806 | 43.478 | 0.86 | 0.00 | 44.23 | 3.46 |
2487 | 3741 | 2.863132 | TGCCCTAAGCTTACCGAAAA | 57.137 | 45.000 | 0.86 | 0.00 | 44.23 | 2.29 |
2488 | 3742 | 3.143211 | TGCCCTAAGCTTACCGAAAAA | 57.857 | 42.857 | 0.86 | 0.00 | 44.23 | 1.94 |
2489 | 3743 | 3.078837 | TGCCCTAAGCTTACCGAAAAAG | 58.921 | 45.455 | 0.86 | 0.00 | 44.23 | 2.27 |
2490 | 3744 | 2.422479 | GCCCTAAGCTTACCGAAAAAGG | 59.578 | 50.000 | 0.86 | 1.12 | 38.99 | 3.11 |
2491 | 3745 | 2.422479 | CCCTAAGCTTACCGAAAAAGGC | 59.578 | 50.000 | 0.86 | 0.00 | 33.69 | 4.35 |
2492 | 3746 | 3.344515 | CCTAAGCTTACCGAAAAAGGCT | 58.655 | 45.455 | 0.86 | 0.00 | 33.69 | 4.58 |
2493 | 3747 | 3.756963 | CCTAAGCTTACCGAAAAAGGCTT | 59.243 | 43.478 | 0.86 | 0.00 | 33.69 | 4.35 |
2494 | 3748 | 4.217767 | CCTAAGCTTACCGAAAAAGGCTTT | 59.782 | 41.667 | 6.68 | 6.68 | 33.69 | 3.51 |
2495 | 3749 | 3.917329 | AGCTTACCGAAAAAGGCTTTC | 57.083 | 42.857 | 13.76 | 0.41 | 33.69 | 2.62 |
2497 | 3751 | 2.581637 | CTTACCGAAAAAGGCTTTCGC | 58.418 | 47.619 | 13.76 | 7.41 | 46.89 | 4.70 |
2507 | 3761 | 3.509659 | GCTTTCGCCCCGCTTTAT | 58.490 | 55.556 | 0.00 | 0.00 | 0.00 | 1.40 |
2508 | 3762 | 2.697819 | GCTTTCGCCCCGCTTTATA | 58.302 | 52.632 | 0.00 | 0.00 | 0.00 | 0.98 |
2509 | 3763 | 1.235724 | GCTTTCGCCCCGCTTTATAT | 58.764 | 50.000 | 0.00 | 0.00 | 0.00 | 0.86 |
2510 | 3764 | 1.607148 | GCTTTCGCCCCGCTTTATATT | 59.393 | 47.619 | 0.00 | 0.00 | 0.00 | 1.28 |
2511 | 3765 | 2.809696 | GCTTTCGCCCCGCTTTATATTA | 59.190 | 45.455 | 0.00 | 0.00 | 0.00 | 0.98 |
2512 | 3766 | 3.439129 | GCTTTCGCCCCGCTTTATATTAT | 59.561 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
2513 | 3767 | 4.632688 | GCTTTCGCCCCGCTTTATATTATA | 59.367 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
2514 | 3768 | 5.122711 | GCTTTCGCCCCGCTTTATATTATAA | 59.877 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2515 | 3769 | 6.348704 | GCTTTCGCCCCGCTTTATATTATAAA | 60.349 | 38.462 | 8.26 | 8.26 | 0.00 | 1.40 |
2516 | 3770 | 6.730960 | TTCGCCCCGCTTTATATTATAAAG | 57.269 | 37.500 | 23.28 | 23.28 | 37.53 | 1.85 |
2527 | 3781 | 7.569639 | TTTATATTATAAAGCCAACCGCACA | 57.430 | 32.000 | 5.01 | 0.00 | 41.38 | 4.57 |
2528 | 3782 | 7.569639 | TTATATTATAAAGCCAACCGCACAA | 57.430 | 32.000 | 0.00 | 0.00 | 41.38 | 3.33 |
2529 | 3783 | 3.562567 | TTATAAAGCCAACCGCACAAC | 57.437 | 42.857 | 0.00 | 0.00 | 41.38 | 3.32 |
2530 | 3784 | 1.323412 | ATAAAGCCAACCGCACAACA | 58.677 | 45.000 | 0.00 | 0.00 | 41.38 | 3.33 |
2531 | 3785 | 1.103803 | TAAAGCCAACCGCACAACAA | 58.896 | 45.000 | 0.00 | 0.00 | 41.38 | 2.83 |
2532 | 3786 | 0.179113 | AAAGCCAACCGCACAACAAG | 60.179 | 50.000 | 0.00 | 0.00 | 41.38 | 3.16 |
2533 | 3787 | 2.627510 | AAGCCAACCGCACAACAAGC | 62.628 | 55.000 | 0.00 | 0.00 | 41.38 | 4.01 |
2534 | 3788 | 2.804167 | CCAACCGCACAACAAGCA | 59.196 | 55.556 | 0.00 | 0.00 | 0.00 | 3.91 |
2535 | 3789 | 1.363443 | CCAACCGCACAACAAGCAT | 59.637 | 52.632 | 0.00 | 0.00 | 0.00 | 3.79 |
2536 | 3790 | 0.664166 | CCAACCGCACAACAAGCATC | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2537 | 3791 | 0.664166 | CAACCGCACAACAAGCATCC | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2538 | 3792 | 1.106351 | AACCGCACAACAAGCATCCA | 61.106 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2539 | 3793 | 1.106351 | ACCGCACAACAAGCATCCAA | 61.106 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2540 | 3794 | 0.664166 | CCGCACAACAAGCATCCAAC | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2541 | 3795 | 0.030504 | CGCACAACAAGCATCCAACA | 59.969 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2542 | 3796 | 1.535649 | CGCACAACAAGCATCCAACAA | 60.536 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2543 | 3797 | 2.129607 | GCACAACAAGCATCCAACAAG | 58.870 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2544 | 3798 | 2.746269 | CACAACAAGCATCCAACAAGG | 58.254 | 47.619 | 0.00 | 0.00 | 39.47 | 3.61 |
2545 | 3799 | 2.101249 | CACAACAAGCATCCAACAAGGT | 59.899 | 45.455 | 0.00 | 0.00 | 39.02 | 3.50 |
2546 | 3800 | 2.362077 | ACAACAAGCATCCAACAAGGTC | 59.638 | 45.455 | 0.00 | 0.00 | 39.02 | 3.85 |
2547 | 3801 | 1.620822 | ACAAGCATCCAACAAGGTCC | 58.379 | 50.000 | 0.00 | 0.00 | 39.02 | 4.46 |
2548 | 3802 | 1.133513 | ACAAGCATCCAACAAGGTCCA | 60.134 | 47.619 | 0.00 | 0.00 | 39.02 | 4.02 |
2549 | 3803 | 1.962807 | CAAGCATCCAACAAGGTCCAA | 59.037 | 47.619 | 0.00 | 0.00 | 39.02 | 3.53 |
2550 | 3804 | 1.620822 | AGCATCCAACAAGGTCCAAC | 58.379 | 50.000 | 0.00 | 0.00 | 39.02 | 3.77 |
2551 | 3805 | 1.133513 | AGCATCCAACAAGGTCCAACA | 60.134 | 47.619 | 0.00 | 0.00 | 39.02 | 3.33 |
2552 | 3806 | 1.000274 | GCATCCAACAAGGTCCAACAC | 60.000 | 52.381 | 0.00 | 0.00 | 39.02 | 3.32 |
2553 | 3807 | 2.305928 | CATCCAACAAGGTCCAACACA | 58.694 | 47.619 | 0.00 | 0.00 | 39.02 | 3.72 |
2554 | 3808 | 2.051334 | TCCAACAAGGTCCAACACAG | 57.949 | 50.000 | 0.00 | 0.00 | 39.02 | 3.66 |
2555 | 3809 | 1.562008 | TCCAACAAGGTCCAACACAGA | 59.438 | 47.619 | 0.00 | 0.00 | 39.02 | 3.41 |
2556 | 3810 | 2.174639 | TCCAACAAGGTCCAACACAGAT | 59.825 | 45.455 | 0.00 | 0.00 | 39.02 | 2.90 |
2557 | 3811 | 3.392947 | TCCAACAAGGTCCAACACAGATA | 59.607 | 43.478 | 0.00 | 0.00 | 39.02 | 1.98 |
2558 | 3812 | 3.502211 | CCAACAAGGTCCAACACAGATAC | 59.498 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
2559 | 3813 | 4.133820 | CAACAAGGTCCAACACAGATACA | 58.866 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
2560 | 3814 | 3.740115 | ACAAGGTCCAACACAGATACAC | 58.260 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2561 | 3815 | 2.736721 | CAAGGTCCAACACAGATACACG | 59.263 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
2562 | 3816 | 1.076332 | GGTCCAACACAGATACACGC | 58.924 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2563 | 3817 | 1.606994 | GGTCCAACACAGATACACGCA | 60.607 | 52.381 | 0.00 | 0.00 | 0.00 | 5.24 |
2564 | 3818 | 1.459592 | GTCCAACACAGATACACGCAC | 59.540 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
2565 | 3819 | 1.069358 | TCCAACACAGATACACGCACA | 59.931 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
2566 | 3820 | 1.194547 | CCAACACAGATACACGCACAC | 59.805 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
2567 | 3821 | 1.864082 | CAACACAGATACACGCACACA | 59.136 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
2568 | 3822 | 1.497991 | ACACAGATACACGCACACAC | 58.502 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2569 | 3823 | 1.202475 | ACACAGATACACGCACACACA | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
2570 | 3824 | 1.192312 | CACAGATACACGCACACACAC | 59.808 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
2571 | 3825 | 1.202475 | ACAGATACACGCACACACACA | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
2572 | 3826 | 1.192312 | CAGATACACGCACACACACAC | 59.808 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
2573 | 3827 | 0.160813 | GATACACGCACACACACACG | 59.839 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
2574 | 3828 | 1.218875 | ATACACGCACACACACACGG | 61.219 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2575 | 3829 | 2.280823 | TACACGCACACACACACGGA | 62.281 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2576 | 3830 | 2.125472 | ACGCACACACACACGGAA | 60.125 | 55.556 | 0.00 | 0.00 | 0.00 | 4.30 |
2577 | 3831 | 2.171079 | ACGCACACACACACGGAAG | 61.171 | 57.895 | 0.00 | 0.00 | 0.00 | 3.46 |
2589 | 3843 | 2.523440 | ACGGAAGTCCACAGGAACA | 58.477 | 52.632 | 0.00 | 0.00 | 44.19 | 3.18 |
2590 | 3844 | 1.056660 | ACGGAAGTCCACAGGAACAT | 58.943 | 50.000 | 0.00 | 0.00 | 44.19 | 2.71 |
2591 | 3845 | 2.253610 | ACGGAAGTCCACAGGAACATA | 58.746 | 47.619 | 0.00 | 0.00 | 44.19 | 2.29 |
2592 | 3846 | 2.635915 | ACGGAAGTCCACAGGAACATAA | 59.364 | 45.455 | 0.00 | 0.00 | 44.19 | 1.90 |
2593 | 3847 | 3.071892 | ACGGAAGTCCACAGGAACATAAA | 59.928 | 43.478 | 0.00 | 0.00 | 44.19 | 1.40 |
2594 | 3848 | 3.684788 | CGGAAGTCCACAGGAACATAAAG | 59.315 | 47.826 | 0.00 | 0.00 | 31.38 | 1.85 |
2595 | 3849 | 4.652822 | GGAAGTCCACAGGAACATAAAGT | 58.347 | 43.478 | 0.00 | 0.00 | 31.38 | 2.66 |
2596 | 3850 | 5.568023 | CGGAAGTCCACAGGAACATAAAGTA | 60.568 | 44.000 | 0.00 | 0.00 | 31.38 | 2.24 |
2597 | 3851 | 5.875359 | GGAAGTCCACAGGAACATAAAGTAG | 59.125 | 44.000 | 0.00 | 0.00 | 31.38 | 2.57 |
2598 | 3852 | 6.435292 | AAGTCCACAGGAACATAAAGTAGT | 57.565 | 37.500 | 0.00 | 0.00 | 31.38 | 2.73 |
2599 | 3853 | 6.435292 | AGTCCACAGGAACATAAAGTAGTT | 57.565 | 37.500 | 0.00 | 0.00 | 31.38 | 2.24 |
2600 | 3854 | 6.231211 | AGTCCACAGGAACATAAAGTAGTTG | 58.769 | 40.000 | 0.00 | 0.00 | 31.38 | 3.16 |
2601 | 3855 | 5.411669 | GTCCACAGGAACATAAAGTAGTTGG | 59.588 | 44.000 | 0.00 | 0.00 | 31.38 | 3.77 |
2602 | 3856 | 5.308497 | TCCACAGGAACATAAAGTAGTTGGA | 59.692 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2603 | 3857 | 6.001460 | CCACAGGAACATAAAGTAGTTGGAA | 58.999 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2604 | 3858 | 6.149474 | CCACAGGAACATAAAGTAGTTGGAAG | 59.851 | 42.308 | 0.00 | 0.00 | 0.00 | 3.46 |
2605 | 3859 | 6.149474 | CACAGGAACATAAAGTAGTTGGAAGG | 59.851 | 42.308 | 0.00 | 0.00 | 0.00 | 3.46 |
2606 | 3860 | 5.648092 | CAGGAACATAAAGTAGTTGGAAGGG | 59.352 | 44.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2607 | 3861 | 5.312443 | AGGAACATAAAGTAGTTGGAAGGGT | 59.688 | 40.000 | 0.00 | 0.00 | 0.00 | 4.34 |
2608 | 3862 | 5.646793 | GGAACATAAAGTAGTTGGAAGGGTC | 59.353 | 44.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2609 | 3863 | 5.836024 | ACATAAAGTAGTTGGAAGGGTCA | 57.164 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
2610 | 3864 | 6.195600 | ACATAAAGTAGTTGGAAGGGTCAA | 57.804 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
2611 | 3865 | 6.790319 | ACATAAAGTAGTTGGAAGGGTCAAT | 58.210 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2612 | 3866 | 6.659242 | ACATAAAGTAGTTGGAAGGGTCAATG | 59.341 | 38.462 | 0.00 | 0.00 | 0.00 | 2.82 |
2613 | 3867 | 3.073274 | AGTAGTTGGAAGGGTCAATGC | 57.927 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
2614 | 3868 | 2.644798 | AGTAGTTGGAAGGGTCAATGCT | 59.355 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
2615 | 3869 | 1.915141 | AGTTGGAAGGGTCAATGCTG | 58.085 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2616 | 3870 | 1.425066 | AGTTGGAAGGGTCAATGCTGA | 59.575 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
2617 | 3871 | 1.815003 | GTTGGAAGGGTCAATGCTGAG | 59.185 | 52.381 | 0.00 | 0.00 | 30.14 | 3.35 |
2618 | 3872 | 0.329261 | TGGAAGGGTCAATGCTGAGG | 59.671 | 55.000 | 0.00 | 0.00 | 30.14 | 3.86 |
2619 | 3873 | 0.394899 | GGAAGGGTCAATGCTGAGGG | 60.395 | 60.000 | 0.00 | 0.00 | 30.14 | 4.30 |
2620 | 3874 | 1.000396 | AAGGGTCAATGCTGAGGGC | 60.000 | 57.895 | 0.00 | 0.00 | 42.22 | 5.19 |
2630 | 3884 | 3.348236 | CTGAGGGCACAGCACAAC | 58.652 | 61.111 | 0.00 | 0.00 | 32.33 | 3.32 |
2631 | 3885 | 1.526686 | CTGAGGGCACAGCACAACA | 60.527 | 57.895 | 0.00 | 0.00 | 32.33 | 3.33 |
2632 | 3886 | 1.077140 | TGAGGGCACAGCACAACAA | 60.077 | 52.632 | 0.00 | 0.00 | 32.33 | 2.83 |
2633 | 3887 | 1.102809 | TGAGGGCACAGCACAACAAG | 61.103 | 55.000 | 0.00 | 0.00 | 32.33 | 3.16 |
2634 | 3888 | 2.028043 | GGGCACAGCACAACAAGC | 59.972 | 61.111 | 0.00 | 0.00 | 0.00 | 4.01 |
2635 | 3889 | 2.028043 | GGCACAGCACAACAAGCC | 59.972 | 61.111 | 0.00 | 0.00 | 34.71 | 4.35 |
2636 | 3890 | 2.028043 | GCACAGCACAACAAGCCC | 59.972 | 61.111 | 0.00 | 0.00 | 0.00 | 5.19 |
2637 | 3891 | 2.492773 | GCACAGCACAACAAGCCCT | 61.493 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
2638 | 3892 | 1.172180 | GCACAGCACAACAAGCCCTA | 61.172 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2639 | 3893 | 1.317613 | CACAGCACAACAAGCCCTAA | 58.682 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2640 | 3894 | 1.680735 | CACAGCACAACAAGCCCTAAA | 59.319 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
2641 | 3895 | 1.681264 | ACAGCACAACAAGCCCTAAAC | 59.319 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
2642 | 3896 | 1.680735 | CAGCACAACAAGCCCTAAACA | 59.319 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2643 | 3897 | 1.681264 | AGCACAACAAGCCCTAAACAC | 59.319 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
2644 | 3898 | 1.407258 | GCACAACAAGCCCTAAACACA | 59.593 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
2645 | 3899 | 2.159170 | GCACAACAAGCCCTAAACACAA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
2646 | 3900 | 3.677424 | GCACAACAAGCCCTAAACACAAA | 60.677 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2647 | 3901 | 4.499183 | CACAACAAGCCCTAAACACAAAA | 58.501 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
2648 | 3902 | 4.328712 | CACAACAAGCCCTAAACACAAAAC | 59.671 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
2649 | 3903 | 4.021016 | ACAACAAGCCCTAAACACAAAACA | 60.021 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
2650 | 3904 | 4.118093 | ACAAGCCCTAAACACAAAACAC | 57.882 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
2651 | 3905 | 3.511934 | ACAAGCCCTAAACACAAAACACA | 59.488 | 39.130 | 0.00 | 0.00 | 0.00 | 3.72 |
2652 | 3906 | 3.793797 | AGCCCTAAACACAAAACACAC | 57.206 | 42.857 | 0.00 | 0.00 | 0.00 | 3.82 |
2653 | 3907 | 3.093057 | AGCCCTAAACACAAAACACACA | 58.907 | 40.909 | 0.00 | 0.00 | 0.00 | 3.72 |
2654 | 3908 | 3.119280 | AGCCCTAAACACAAAACACACAC | 60.119 | 43.478 | 0.00 | 0.00 | 0.00 | 3.82 |
2655 | 3909 | 3.430931 | CCCTAAACACAAAACACACACG | 58.569 | 45.455 | 0.00 | 0.00 | 0.00 | 4.49 |
2656 | 3910 | 2.849473 | CCTAAACACAAAACACACACGC | 59.151 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
2657 | 3911 | 1.704070 | AAACACAAAACACACACGCC | 58.296 | 45.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2658 | 3912 | 0.598562 | AACACAAAACACACACGCCA | 59.401 | 45.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2659 | 3913 | 0.109504 | ACACAAAACACACACGCCAC | 60.110 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2660 | 3914 | 0.109551 | CACAAAACACACACGCCACA | 60.110 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2661 | 3915 | 0.170116 | ACAAAACACACACGCCACAG | 59.830 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2662 | 3916 | 0.449786 | CAAAACACACACGCCACAGA | 59.550 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2663 | 3917 | 0.732571 | AAAACACACACGCCACAGAG | 59.267 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
2664 | 3918 | 1.714899 | AAACACACACGCCACAGAGC | 61.715 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2665 | 3919 | 2.280389 | CACACACGCCACAGAGCT | 60.280 | 61.111 | 0.00 | 0.00 | 0.00 | 4.09 |
2666 | 3920 | 2.280389 | ACACACGCCACAGAGCTG | 60.280 | 61.111 | 0.00 | 0.00 | 0.00 | 4.24 |
2667 | 3921 | 3.720193 | CACACGCCACAGAGCTGC | 61.720 | 66.667 | 0.00 | 0.00 | 0.00 | 5.25 |
2668 | 3922 | 4.996434 | ACACGCCACAGAGCTGCC | 62.996 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
2671 | 3925 | 3.774528 | CGCCACAGAGCTGCCCTA | 61.775 | 66.667 | 0.00 | 0.00 | 0.00 | 3.53 |
2672 | 3926 | 2.671070 | GCCACAGAGCTGCCCTAA | 59.329 | 61.111 | 0.00 | 0.00 | 0.00 | 2.69 |
2673 | 3927 | 1.451028 | GCCACAGAGCTGCCCTAAG | 60.451 | 63.158 | 0.00 | 0.00 | 0.00 | 2.18 |
2674 | 3928 | 1.451028 | CCACAGAGCTGCCCTAAGC | 60.451 | 63.158 | 0.00 | 0.00 | 43.88 | 3.09 |
2804 | 4063 | 5.641209 | AGAGTAACTGTGTCATTTCAGATGC | 59.359 | 40.000 | 0.00 | 0.00 | 35.84 | 3.91 |
2811 | 4070 | 6.128090 | ACTGTGTCATTTCAGATGCAATACTG | 60.128 | 38.462 | 11.09 | 11.09 | 35.84 | 2.74 |
2820 | 4079 | 6.908870 | TCAGATGCAATACTGAACATGTAC | 57.091 | 37.500 | 15.66 | 0.00 | 39.68 | 2.90 |
2824 | 4083 | 6.540189 | AGATGCAATACTGAACATGTACCTTC | 59.460 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
2827 | 4086 | 5.808540 | GCAATACTGAACATGTACCTTCGTA | 59.191 | 40.000 | 0.00 | 1.19 | 0.00 | 3.43 |
2833 | 4092 | 4.464951 | TGAACATGTACCTTCGTACTCCAT | 59.535 | 41.667 | 0.00 | 0.00 | 44.48 | 3.41 |
2835 | 4094 | 3.383825 | ACATGTACCTTCGTACTCCATCC | 59.616 | 47.826 | 0.00 | 0.00 | 44.48 | 3.51 |
2843 | 4102 | 1.683385 | TCGTACTCCATCCTGCTCATG | 59.317 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
2845 | 4104 | 2.159043 | CGTACTCCATCCTGCTCATGTT | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2846 | 4105 | 2.706339 | ACTCCATCCTGCTCATGTTC | 57.294 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2855 | 4114 | 3.776969 | TCCTGCTCATGTTCTCCTTGTAT | 59.223 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
2901 | 4160 | 5.131142 | ACAGAAGGTGCATAGTAGGCTTATT | 59.869 | 40.000 | 8.45 | 0.00 | 0.00 | 1.40 |
2927 | 4245 | 6.073058 | TGCGATGAATGATAATAGGTTTGCTC | 60.073 | 38.462 | 0.00 | 0.00 | 0.00 | 4.26 |
2966 | 4284 | 6.203145 | GTCTCCTCTTTCCAGTTAAACTGTTC | 59.797 | 42.308 | 0.00 | 0.00 | 44.50 | 3.18 |
3010 | 4328 | 8.611757 | ACATTTTTATTTTTGTGAAGCTGAACC | 58.388 | 29.630 | 0.00 | 0.00 | 0.00 | 3.62 |
3240 | 4569 | 3.005050 | CACACAATGACTGTTCCTGCAAT | 59.995 | 43.478 | 0.00 | 0.00 | 35.47 | 3.56 |
3282 | 4613 | 8.072321 | TGTGTATCTAAAGAGCTCTCAAGATT | 57.928 | 34.615 | 30.69 | 19.51 | 32.20 | 2.40 |
3283 | 4614 | 7.978414 | TGTGTATCTAAAGAGCTCTCAAGATTG | 59.022 | 37.037 | 30.69 | 14.53 | 32.20 | 2.67 |
3284 | 4615 | 7.978975 | GTGTATCTAAAGAGCTCTCAAGATTGT | 59.021 | 37.037 | 30.69 | 18.62 | 32.20 | 2.71 |
3285 | 4616 | 9.190317 | TGTATCTAAAGAGCTCTCAAGATTGTA | 57.810 | 33.333 | 30.69 | 20.26 | 32.20 | 2.41 |
3286 | 4617 | 9.677567 | GTATCTAAAGAGCTCTCAAGATTGTAG | 57.322 | 37.037 | 30.69 | 14.05 | 32.20 | 2.74 |
3287 | 4618 | 7.946381 | TCTAAAGAGCTCTCAAGATTGTAGA | 57.054 | 36.000 | 18.55 | 4.72 | 0.00 | 2.59 |
3288 | 4619 | 8.532186 | TCTAAAGAGCTCTCAAGATTGTAGAT | 57.468 | 34.615 | 18.55 | 0.00 | 0.00 | 1.98 |
3289 | 4620 | 8.976353 | TCTAAAGAGCTCTCAAGATTGTAGATT | 58.024 | 33.333 | 18.55 | 5.20 | 0.00 | 2.40 |
3290 | 4621 | 9.598517 | CTAAAGAGCTCTCAAGATTGTAGATTT | 57.401 | 33.333 | 18.55 | 4.74 | 0.00 | 2.17 |
3291 | 4622 | 7.846644 | AAGAGCTCTCAAGATTGTAGATTTG | 57.153 | 36.000 | 18.55 | 0.00 | 0.00 | 2.32 |
3316 | 4651 | 1.696884 | TCCTGTCATGCTACAACCACA | 59.303 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
3430 | 4976 | 6.563222 | TGTAAATTTGGCTTTAGCTAACGT | 57.437 | 33.333 | 5.45 | 0.00 | 41.23 | 3.99 |
3446 | 4992 | 1.358759 | CGTGTTGGTTTCACAGGGC | 59.641 | 57.895 | 0.00 | 0.00 | 35.79 | 5.19 |
3526 | 5072 | 2.683362 | TCGTCATCGCTATCTGTCAAGT | 59.317 | 45.455 | 0.00 | 0.00 | 36.96 | 3.16 |
3572 | 5118 | 2.980568 | TGTGTATCATGTTTCGGTCCC | 58.019 | 47.619 | 0.00 | 0.00 | 0.00 | 4.46 |
3653 | 5212 | 9.944663 | TTGTAGCAAACACTTTAGAATTGTAAG | 57.055 | 29.630 | 0.00 | 0.00 | 38.00 | 2.34 |
3679 | 5334 | 9.937175 | GCAACTCTCCACATATAATTCTTTAAC | 57.063 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
3729 | 5384 | 6.096001 | AGCATTCCCTTGTCATTTCATACTTC | 59.904 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
3915 | 5571 | 0.310854 | CCAAAGACCCTGTTGCGTTC | 59.689 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
4067 | 5723 | 1.267261 | CCGCAACAACGTTTTATCCCA | 59.733 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
4068 | 5724 | 2.094957 | CCGCAACAACGTTTTATCCCAT | 60.095 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
4100 | 5756 | 5.368989 | AGGCATTCTAACTGCTTATGTACC | 58.631 | 41.667 | 0.00 | 0.00 | 39.60 | 3.34 |
4124 | 5780 | 5.398122 | CGCGTTTACATTGATCAGTTTGTTT | 59.602 | 36.000 | 11.69 | 0.00 | 0.00 | 2.83 |
4417 | 6121 | 4.369182 | ACTGCGTTACATGGCTATAAGAC | 58.631 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
4418 | 6122 | 4.142026 | ACTGCGTTACATGGCTATAAGACA | 60.142 | 41.667 | 0.00 | 0.00 | 37.84 | 3.41 |
4450 | 6154 | 3.135225 | TGTGGAGTTATGGTGTTGTTCG | 58.865 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
4543 | 6247 | 3.057526 | CCTTGTGGTAACTAAAAGCAGGC | 60.058 | 47.826 | 0.00 | 0.00 | 37.61 | 4.85 |
4546 | 6250 | 2.415512 | GTGGTAACTAAAAGCAGGCGAG | 59.584 | 50.000 | 0.00 | 0.00 | 37.61 | 5.03 |
4550 | 6254 | 0.977395 | ACTAAAAGCAGGCGAGGAGT | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4561 | 6265 | 2.362717 | AGGCGAGGAGTAGATACTTTGC | 59.637 | 50.000 | 0.00 | 0.00 | 36.50 | 3.68 |
4616 | 8680 | 6.899089 | AGATATCCCATTGTACATGTGTCAA | 58.101 | 36.000 | 9.11 | 13.85 | 0.00 | 3.18 |
4664 | 8747 | 5.694231 | AAACCAGTTAATTACGTCCAACC | 57.306 | 39.130 | 0.00 | 0.00 | 0.00 | 3.77 |
4665 | 8748 | 4.354893 | ACCAGTTAATTACGTCCAACCA | 57.645 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
4666 | 8749 | 4.320870 | ACCAGTTAATTACGTCCAACCAG | 58.679 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
4667 | 8750 | 3.126343 | CCAGTTAATTACGTCCAACCAGC | 59.874 | 47.826 | 0.00 | 0.00 | 0.00 | 4.85 |
4668 | 8751 | 3.749088 | CAGTTAATTACGTCCAACCAGCA | 59.251 | 43.478 | 0.00 | 0.00 | 0.00 | 4.41 |
4669 | 8752 | 4.394920 | CAGTTAATTACGTCCAACCAGCAT | 59.605 | 41.667 | 0.00 | 0.00 | 0.00 | 3.79 |
4670 | 8753 | 5.007682 | AGTTAATTACGTCCAACCAGCATT | 58.992 | 37.500 | 0.00 | 0.00 | 0.00 | 3.56 |
4671 | 8754 | 5.475564 | AGTTAATTACGTCCAACCAGCATTT | 59.524 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
4672 | 8755 | 6.655848 | AGTTAATTACGTCCAACCAGCATTTA | 59.344 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
4673 | 8756 | 4.957759 | ATTACGTCCAACCAGCATTTAC | 57.042 | 40.909 | 0.00 | 0.00 | 0.00 | 2.01 |
4674 | 8757 | 2.561478 | ACGTCCAACCAGCATTTACT | 57.439 | 45.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4675 | 8758 | 2.423577 | ACGTCCAACCAGCATTTACTC | 58.576 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
4676 | 8759 | 1.737793 | CGTCCAACCAGCATTTACTCC | 59.262 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
4677 | 8760 | 2.790433 | GTCCAACCAGCATTTACTCCA | 58.210 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
4678 | 8761 | 3.356290 | GTCCAACCAGCATTTACTCCAT | 58.644 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
4679 | 8762 | 3.763897 | GTCCAACCAGCATTTACTCCATT | 59.236 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
4680 | 8763 | 4.220602 | GTCCAACCAGCATTTACTCCATTT | 59.779 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
4681 | 8764 | 4.837860 | TCCAACCAGCATTTACTCCATTTT | 59.162 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
4682 | 8765 | 5.306678 | TCCAACCAGCATTTACTCCATTTTT | 59.693 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
4707 | 8790 | 3.006537 | GCATAATACGCCTCCCAACTAGA | 59.993 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
4713 | 8796 | 1.614241 | GCCTCCCAACTAGAAGCCGA | 61.614 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
4787 | 8870 | 1.263356 | CCCACGAGTGAACTCCCTAA | 58.737 | 55.000 | 4.59 | 0.00 | 39.79 | 2.69 |
4813 | 8896 | 1.676529 | CTCGCCTTCTCGTCCATCTTA | 59.323 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
4823 | 8906 | 3.409570 | TCGTCCATCTTACTAGGATCCG | 58.590 | 50.000 | 5.98 | 0.00 | 33.33 | 4.18 |
4833 | 8916 | 5.833667 | TCTTACTAGGATCCGTGAACATGAT | 59.166 | 40.000 | 5.98 | 0.00 | 0.00 | 2.45 |
4886 | 8970 | 1.651240 | CTCCACGGCTGCCATTCAAG | 61.651 | 60.000 | 20.29 | 3.29 | 0.00 | 3.02 |
4896 | 8980 | 3.062042 | CTGCCATTCAAGTTTTTGCTCC | 58.938 | 45.455 | 0.00 | 0.00 | 34.21 | 4.70 |
4901 | 8985 | 4.553323 | CATTCAAGTTTTTGCTCCCTCAG | 58.447 | 43.478 | 0.00 | 0.00 | 34.21 | 3.35 |
4937 | 9021 | 1.167851 | CTTCCGCTTCCAATGCAAGA | 58.832 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4938 | 9022 | 0.881118 | TTCCGCTTCCAATGCAAGAC | 59.119 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4939 | 9023 | 0.036732 | TCCGCTTCCAATGCAAGACT | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
4940 | 9024 | 0.883833 | CCGCTTCCAATGCAAGACTT | 59.116 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4941 | 9025 | 1.270550 | CCGCTTCCAATGCAAGACTTT | 59.729 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
4942 | 9026 | 2.288395 | CCGCTTCCAATGCAAGACTTTT | 60.288 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
4943 | 9027 | 2.982470 | CGCTTCCAATGCAAGACTTTTC | 59.018 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
4944 | 9028 | 3.320626 | GCTTCCAATGCAAGACTTTTCC | 58.679 | 45.455 | 0.00 | 0.00 | 0.00 | 3.13 |
4945 | 9029 | 3.862264 | GCTTCCAATGCAAGACTTTTCCC | 60.862 | 47.826 | 0.00 | 0.00 | 0.00 | 3.97 |
4946 | 9030 | 2.247358 | TCCAATGCAAGACTTTTCCCC | 58.753 | 47.619 | 0.00 | 0.00 | 0.00 | 4.81 |
4947 | 9031 | 2.158325 | TCCAATGCAAGACTTTTCCCCT | 60.158 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
4948 | 9032 | 2.232208 | CCAATGCAAGACTTTTCCCCTC | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4949 | 9033 | 2.892852 | CAATGCAAGACTTTTCCCCTCA | 59.107 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
4950 | 9034 | 2.746279 | TGCAAGACTTTTCCCCTCAA | 57.254 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4951 | 9035 | 3.025322 | TGCAAGACTTTTCCCCTCAAA | 57.975 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
4952 | 9036 | 2.693074 | TGCAAGACTTTTCCCCTCAAAC | 59.307 | 45.455 | 0.00 | 0.00 | 0.00 | 2.93 |
4953 | 9037 | 2.959030 | GCAAGACTTTTCCCCTCAAACT | 59.041 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
4954 | 9038 | 3.004839 | GCAAGACTTTTCCCCTCAAACTC | 59.995 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
4955 | 9039 | 4.207165 | CAAGACTTTTCCCCTCAAACTCA | 58.793 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
4956 | 9040 | 4.519906 | AGACTTTTCCCCTCAAACTCAA | 57.480 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
4957 | 9041 | 4.464947 | AGACTTTTCCCCTCAAACTCAAG | 58.535 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4958 | 9042 | 2.959030 | ACTTTTCCCCTCAAACTCAAGC | 59.041 | 45.455 | 0.00 | 0.00 | 0.00 | 4.01 |
4971 | 9055 | 3.415457 | ACTCAAGCCTTTTCTCCTCTG | 57.585 | 47.619 | 0.00 | 0.00 | 0.00 | 3.35 |
4987 | 9071 | 3.447586 | TCCTCTGCTAGCGTGTTTCTATT | 59.552 | 43.478 | 10.77 | 0.00 | 0.00 | 1.73 |
4988 | 9072 | 4.081642 | TCCTCTGCTAGCGTGTTTCTATTT | 60.082 | 41.667 | 10.77 | 0.00 | 0.00 | 1.40 |
5023 | 9107 | 4.640771 | TTGCCTTCCACTTCTACTCATT | 57.359 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
5024 | 9108 | 3.942829 | TGCCTTCCACTTCTACTCATTG | 58.057 | 45.455 | 0.00 | 0.00 | 0.00 | 2.82 |
5045 | 9129 | 4.367386 | GATGGCCTTCATCTTGAAAGTG | 57.633 | 45.455 | 13.60 | 0.00 | 46.59 | 3.16 |
5046 | 9130 | 1.888512 | TGGCCTTCATCTTGAAAGTGC | 59.111 | 47.619 | 3.32 | 0.00 | 35.73 | 4.40 |
5047 | 9131 | 1.888512 | GGCCTTCATCTTGAAAGTGCA | 59.111 | 47.619 | 0.00 | 0.00 | 35.73 | 4.57 |
5048 | 9132 | 2.297033 | GGCCTTCATCTTGAAAGTGCAA | 59.703 | 45.455 | 0.00 | 0.00 | 35.73 | 4.08 |
5049 | 9133 | 3.311966 | GCCTTCATCTTGAAAGTGCAAC | 58.688 | 45.455 | 0.00 | 0.00 | 35.73 | 4.17 |
5062 | 9146 | 2.622064 | GTGCAACTATCCCTAGGTGG | 57.378 | 55.000 | 8.29 | 0.00 | 42.07 | 4.61 |
5063 | 9147 | 1.838077 | GTGCAACTATCCCTAGGTGGT | 59.162 | 52.381 | 8.29 | 0.00 | 42.07 | 4.16 |
5064 | 9148 | 2.238898 | GTGCAACTATCCCTAGGTGGTT | 59.761 | 50.000 | 8.29 | 1.46 | 42.07 | 3.67 |
5065 | 9149 | 2.916934 | TGCAACTATCCCTAGGTGGTTT | 59.083 | 45.455 | 8.29 | 0.00 | 42.07 | 3.27 |
5066 | 9150 | 3.332485 | TGCAACTATCCCTAGGTGGTTTT | 59.668 | 43.478 | 8.29 | 0.00 | 42.07 | 2.43 |
5067 | 9151 | 3.694566 | GCAACTATCCCTAGGTGGTTTTG | 59.305 | 47.826 | 8.29 | 6.66 | 42.07 | 2.44 |
5068 | 9152 | 4.270008 | CAACTATCCCTAGGTGGTTTTGG | 58.730 | 47.826 | 8.29 | 0.00 | 38.75 | 3.28 |
5069 | 9153 | 3.538387 | ACTATCCCTAGGTGGTTTTGGT | 58.462 | 45.455 | 8.29 | 0.00 | 0.00 | 3.67 |
5070 | 9154 | 4.702196 | ACTATCCCTAGGTGGTTTTGGTA | 58.298 | 43.478 | 8.29 | 0.00 | 0.00 | 3.25 |
5071 | 9155 | 5.102967 | ACTATCCCTAGGTGGTTTTGGTAA | 58.897 | 41.667 | 8.29 | 0.00 | 0.00 | 2.85 |
5072 | 9156 | 5.734634 | ACTATCCCTAGGTGGTTTTGGTAAT | 59.265 | 40.000 | 8.29 | 0.00 | 0.00 | 1.89 |
5073 | 9157 | 5.546035 | ATCCCTAGGTGGTTTTGGTAATT | 57.454 | 39.130 | 8.29 | 0.00 | 0.00 | 1.40 |
5074 | 9158 | 4.925836 | TCCCTAGGTGGTTTTGGTAATTC | 58.074 | 43.478 | 8.29 | 0.00 | 0.00 | 2.17 |
5075 | 9159 | 4.354387 | TCCCTAGGTGGTTTTGGTAATTCA | 59.646 | 41.667 | 8.29 | 0.00 | 0.00 | 2.57 |
5076 | 9160 | 5.015817 | TCCCTAGGTGGTTTTGGTAATTCAT | 59.984 | 40.000 | 8.29 | 0.00 | 0.00 | 2.57 |
5077 | 9161 | 6.217900 | TCCCTAGGTGGTTTTGGTAATTCATA | 59.782 | 38.462 | 8.29 | 0.00 | 0.00 | 2.15 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
114 | 130 | 7.910304 | ACTCATGACTTATATTCGAAAACAGC | 58.090 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
506 | 1392 | 3.682858 | CCACCCTACACGTTGATTAGTTG | 59.317 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
519 | 1430 | 1.272807 | GCTAACCACTCCACCCTACA | 58.727 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
601 | 1514 | 2.667418 | CCCAGTCCAGCCTGTCAG | 59.333 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
610 | 1523 | 0.251653 | ACTTCTCTACGCCCAGTCCA | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
703 | 1628 | 0.394192 | CTGTCAGCCAGTGAACCAGA | 59.606 | 55.000 | 0.00 | 0.00 | 36.74 | 3.86 |
745 | 1670 | 9.905713 | ATCCTGTTTTGTATACATAATCTGTGT | 57.094 | 29.630 | 6.36 | 0.00 | 38.92 | 3.72 |
777 | 1704 | 7.197071 | ACTTGATTTAGACGTGCAAATACAA | 57.803 | 32.000 | 0.00 | 4.87 | 0.00 | 2.41 |
790 | 1717 | 9.748708 | CAAAGTGATGGAAAAACTTGATTTAGA | 57.251 | 29.630 | 0.00 | 0.00 | 34.46 | 2.10 |
815 | 1742 | 6.072728 | GGTGCTAAAAGTTGTGATGTACATCA | 60.073 | 38.462 | 30.29 | 30.29 | 44.83 | 3.07 |
824 | 1769 | 4.702612 | TCACTTTGGTGCTAAAAGTTGTGA | 59.297 | 37.500 | 8.61 | 0.00 | 43.60 | 3.58 |
833 | 1778 | 6.775708 | AGGTAAATAGTCACTTTGGTGCTAA | 58.224 | 36.000 | 0.00 | 0.00 | 42.72 | 3.09 |
849 | 1794 | 7.924412 | CGGTGATGCTAGAACTTAAGGTAAATA | 59.076 | 37.037 | 7.53 | 0.00 | 0.00 | 1.40 |
856 | 1801 | 3.865745 | CACCGGTGATGCTAGAACTTAAG | 59.134 | 47.826 | 31.31 | 0.00 | 0.00 | 1.85 |
858 | 1803 | 2.829720 | ACACCGGTGATGCTAGAACTTA | 59.170 | 45.455 | 40.21 | 0.00 | 0.00 | 2.24 |
870 | 1815 | 4.062293 | CAAAGAGTCAATTACACCGGTGA | 58.938 | 43.478 | 40.21 | 20.46 | 0.00 | 4.02 |
899 | 1844 | 2.005960 | GCAGGTCACGAGCTACCGAT | 62.006 | 60.000 | 1.33 | 0.00 | 40.88 | 4.18 |
902 | 1847 | 1.153745 | CTGCAGGTCACGAGCTACC | 60.154 | 63.158 | 5.57 | 0.00 | 37.39 | 3.18 |
1261 | 2209 | 1.204113 | AAGGAAGGGGAGAGTGCCTG | 61.204 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1276 | 2224 | 2.303175 | ACGGCTTTGCTTTTGTAAGGA | 58.697 | 42.857 | 0.00 | 0.00 | 31.76 | 3.36 |
1306 | 2254 | 1.996191 | GAGGTCAGTTCATTCGCAGAC | 59.004 | 52.381 | 0.00 | 0.00 | 34.32 | 3.51 |
1330 | 2318 | 7.425224 | TCAAAGATAAGTTCCCCAAACAAAA | 57.575 | 32.000 | 0.00 | 0.00 | 40.56 | 2.44 |
1453 | 2441 | 2.353208 | GCCCAGACCTGCTATATCGAAG | 60.353 | 54.545 | 0.00 | 0.00 | 0.00 | 3.79 |
1582 | 2570 | 0.953727 | CAGCTGTAACTTGCAAGGCA | 59.046 | 50.000 | 29.18 | 21.70 | 36.47 | 4.75 |
1659 | 2651 | 6.524586 | GCACAGTTAGTTGATCTGCAAAATAC | 59.475 | 38.462 | 0.00 | 0.00 | 38.44 | 1.89 |
1679 | 2671 | 2.286872 | CTATTGGAAGAGCAGGCACAG | 58.713 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
1695 | 2687 | 7.237055 | CCCCCTAAGTGCCTAATAACTACTATT | 59.763 | 40.741 | 0.00 | 0.00 | 34.47 | 1.73 |
1701 | 2693 | 2.442126 | GCCCCCTAAGTGCCTAATAACT | 59.558 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1702 | 2694 | 2.173996 | TGCCCCCTAAGTGCCTAATAAC | 59.826 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1723 | 2715 | 5.028549 | AGTGTTCGGAGATTTGCTCATAT | 57.971 | 39.130 | 0.00 | 0.00 | 45.81 | 1.78 |
1729 | 2721 | 2.094417 | GCAGTAGTGTTCGGAGATTTGC | 59.906 | 50.000 | 0.00 | 0.00 | 35.04 | 3.68 |
1816 | 2808 | 6.249035 | ACGGGGCATATATTATCAAAAACG | 57.751 | 37.500 | 0.00 | 0.00 | 0.00 | 3.60 |
1821 | 2813 | 8.927675 | AAGTAAAACGGGGCATATATTATCAA | 57.072 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
1827 | 2819 | 7.284820 | ACAGTAAAGTAAAACGGGGCATATAT | 58.715 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
1828 | 2820 | 6.652053 | ACAGTAAAGTAAAACGGGGCATATA | 58.348 | 36.000 | 0.00 | 0.00 | 0.00 | 0.86 |
1850 | 2842 | 5.368145 | GTTACCTGGCATATCATCAAGACA | 58.632 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
1935 | 2927 | 8.700973 | ACAAAACTAGGAAAATAAAAGGCTTGA | 58.299 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
1968 | 2960 | 1.581934 | TTCAACTCAACACGGAGCAG | 58.418 | 50.000 | 0.00 | 0.00 | 38.50 | 4.24 |
1984 | 2978 | 3.758023 | CCAAAGCATACTGTCACCATTCA | 59.242 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
1991 | 2985 | 0.036164 | ACCGCCAAAGCATACTGTCA | 59.964 | 50.000 | 0.00 | 0.00 | 39.83 | 3.58 |
1996 | 2990 | 2.018542 | TCAGTACCGCCAAAGCATAC | 57.981 | 50.000 | 0.00 | 0.00 | 39.83 | 2.39 |
2009 | 3003 | 7.919091 | TGATCACTCGTATACCAAATTCAGTAC | 59.081 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
2013 | 3007 | 7.107639 | TCTGATCACTCGTATACCAAATTCA | 57.892 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2026 | 3020 | 7.351414 | TGTTTTACTTTCATCTGATCACTCG | 57.649 | 36.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2027 | 3021 | 8.725148 | ACATGTTTTACTTTCATCTGATCACTC | 58.275 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2028 | 3022 | 8.627208 | ACATGTTTTACTTTCATCTGATCACT | 57.373 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
2057 | 3051 | 2.698274 | GCTCTGTCCCCTTTTCCAAAAA | 59.302 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
2059 | 3053 | 1.480498 | GGCTCTGTCCCCTTTTCCAAA | 60.480 | 52.381 | 0.00 | 0.00 | 0.00 | 3.28 |
2060 | 3054 | 0.112412 | GGCTCTGTCCCCTTTTCCAA | 59.888 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2061 | 3055 | 0.772124 | AGGCTCTGTCCCCTTTTCCA | 60.772 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2062 | 3056 | 0.034960 | GAGGCTCTGTCCCCTTTTCC | 60.035 | 60.000 | 7.40 | 0.00 | 0.00 | 3.13 |
2063 | 3057 | 0.034960 | GGAGGCTCTGTCCCCTTTTC | 60.035 | 60.000 | 15.23 | 0.00 | 0.00 | 2.29 |
2064 | 3058 | 1.842381 | CGGAGGCTCTGTCCCCTTTT | 61.842 | 60.000 | 15.39 | 0.00 | 0.00 | 2.27 |
2065 | 3059 | 2.294078 | CGGAGGCTCTGTCCCCTTT | 61.294 | 63.158 | 15.39 | 0.00 | 0.00 | 3.11 |
2066 | 3060 | 2.685380 | CGGAGGCTCTGTCCCCTT | 60.685 | 66.667 | 15.39 | 0.00 | 0.00 | 3.95 |
2067 | 3061 | 4.787280 | CCGGAGGCTCTGTCCCCT | 62.787 | 72.222 | 21.38 | 0.00 | 46.14 | 4.79 |
2079 | 3073 | 0.465097 | ATTTGATGCAGAGGCCGGAG | 60.465 | 55.000 | 5.05 | 0.00 | 40.13 | 4.63 |
2080 | 3074 | 0.464373 | GATTTGATGCAGAGGCCGGA | 60.464 | 55.000 | 5.05 | 0.00 | 40.13 | 5.14 |
2081 | 3075 | 1.779025 | CGATTTGATGCAGAGGCCGG | 61.779 | 60.000 | 0.00 | 0.00 | 40.13 | 6.13 |
2082 | 3076 | 0.811219 | TCGATTTGATGCAGAGGCCG | 60.811 | 55.000 | 0.00 | 0.00 | 40.13 | 6.13 |
2083 | 3077 | 1.602311 | ATCGATTTGATGCAGAGGCC | 58.398 | 50.000 | 0.00 | 0.00 | 40.13 | 5.19 |
2092 | 3086 | 1.000607 | GGCTGCATGCATCGATTTGAT | 60.001 | 47.619 | 22.97 | 0.00 | 45.15 | 2.57 |
2093 | 3087 | 0.382873 | GGCTGCATGCATCGATTTGA | 59.617 | 50.000 | 22.97 | 0.00 | 45.15 | 2.69 |
2094 | 3088 | 0.101579 | TGGCTGCATGCATCGATTTG | 59.898 | 50.000 | 22.97 | 8.76 | 45.15 | 2.32 |
2095 | 3089 | 1.000607 | GATGGCTGCATGCATCGATTT | 60.001 | 47.619 | 22.97 | 0.00 | 45.15 | 2.17 |
2096 | 3090 | 0.596577 | GATGGCTGCATGCATCGATT | 59.403 | 50.000 | 22.97 | 5.00 | 45.15 | 3.34 |
2097 | 3091 | 1.574702 | CGATGGCTGCATGCATCGAT | 61.575 | 55.000 | 28.65 | 23.45 | 45.89 | 3.59 |
2098 | 3092 | 2.248835 | CGATGGCTGCATGCATCGA | 61.249 | 57.895 | 28.65 | 20.04 | 45.89 | 3.59 |
2099 | 3093 | 2.171489 | CTCGATGGCTGCATGCATCG | 62.171 | 60.000 | 27.34 | 27.34 | 45.18 | 3.84 |
2100 | 3094 | 0.883370 | TCTCGATGGCTGCATGCATC | 60.883 | 55.000 | 22.97 | 17.75 | 45.15 | 3.91 |
2101 | 3095 | 0.885150 | CTCTCGATGGCTGCATGCAT | 60.885 | 55.000 | 22.97 | 5.92 | 45.15 | 3.96 |
2102 | 3096 | 1.523032 | CTCTCGATGGCTGCATGCA | 60.523 | 57.895 | 21.29 | 21.29 | 45.15 | 3.96 |
2103 | 3097 | 2.252346 | CCTCTCGATGGCTGCATGC | 61.252 | 63.158 | 11.82 | 11.82 | 41.94 | 4.06 |
2104 | 3098 | 0.179065 | TTCCTCTCGATGGCTGCATG | 60.179 | 55.000 | 0.50 | 0.00 | 0.00 | 4.06 |
2105 | 3099 | 0.543277 | TTTCCTCTCGATGGCTGCAT | 59.457 | 50.000 | 0.50 | 0.00 | 0.00 | 3.96 |
2106 | 3100 | 0.324614 | TTTTCCTCTCGATGGCTGCA | 59.675 | 50.000 | 0.50 | 0.00 | 0.00 | 4.41 |
2107 | 3101 | 1.012841 | CTTTTCCTCTCGATGGCTGC | 58.987 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
2108 | 3102 | 1.661341 | CCTTTTCCTCTCGATGGCTG | 58.339 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2109 | 3103 | 0.107459 | GCCTTTTCCTCTCGATGGCT | 60.107 | 55.000 | 0.00 | 0.00 | 36.32 | 4.75 |
2110 | 3104 | 0.107459 | AGCCTTTTCCTCTCGATGGC | 60.107 | 55.000 | 0.00 | 0.00 | 39.19 | 4.40 |
2111 | 3105 | 2.432510 | ACTAGCCTTTTCCTCTCGATGG | 59.567 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2112 | 3106 | 3.810310 | ACTAGCCTTTTCCTCTCGATG | 57.190 | 47.619 | 0.00 | 0.00 | 0.00 | 3.84 |
2113 | 3107 | 4.027437 | AGAACTAGCCTTTTCCTCTCGAT | 58.973 | 43.478 | 0.00 | 0.00 | 0.00 | 3.59 |
2114 | 3108 | 3.432378 | AGAACTAGCCTTTTCCTCTCGA | 58.568 | 45.455 | 0.00 | 0.00 | 0.00 | 4.04 |
2115 | 3109 | 3.878160 | AGAACTAGCCTTTTCCTCTCG | 57.122 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
2116 | 3110 | 7.119709 | AGATTAGAACTAGCCTTTTCCTCTC | 57.880 | 40.000 | 0.00 | 0.00 | 0.00 | 3.20 |
2117 | 3111 | 7.181125 | TCAAGATTAGAACTAGCCTTTTCCTCT | 59.819 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
2118 | 3112 | 7.331791 | TCAAGATTAGAACTAGCCTTTTCCTC | 58.668 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
2119 | 3113 | 7.259088 | TCAAGATTAGAACTAGCCTTTTCCT | 57.741 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2120 | 3114 | 7.554476 | ACATCAAGATTAGAACTAGCCTTTTCC | 59.446 | 37.037 | 0.00 | 0.00 | 0.00 | 3.13 |
2121 | 3115 | 8.499403 | ACATCAAGATTAGAACTAGCCTTTTC | 57.501 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
2126 | 3120 | 9.036671 | GTCTAAACATCAAGATTAGAACTAGCC | 57.963 | 37.037 | 0.00 | 0.00 | 41.47 | 3.93 |
2151 | 3176 | 1.352622 | TTCCACTCACTGGCCAAGGT | 61.353 | 55.000 | 7.01 | 0.00 | 40.39 | 3.50 |
2154 | 3179 | 0.257328 | TGTTTCCACTCACTGGCCAA | 59.743 | 50.000 | 7.01 | 0.00 | 40.39 | 4.52 |
2162 | 3187 | 4.892934 | AGTTTAAGCCATTGTTTCCACTCA | 59.107 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
2201 | 3226 | 2.709934 | AGGGCATGATCAGAGCAAGTAT | 59.290 | 45.455 | 20.48 | 3.19 | 0.00 | 2.12 |
2210 | 3464 | 2.431954 | AAAGACCAGGGCATGATCAG | 57.568 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2263 | 3517 | 5.932303 | CACTACCCTTGGTCAATAATATCCG | 59.068 | 44.000 | 0.00 | 0.00 | 37.09 | 4.18 |
2269 | 3523 | 2.645297 | TGCCACTACCCTTGGTCAATAA | 59.355 | 45.455 | 0.00 | 0.00 | 37.09 | 1.40 |
2300 | 3554 | 3.054728 | TCCCTTTGCATCTCGGTCATTTA | 60.055 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2303 | 3557 | 0.911769 | TCCCTTTGCATCTCGGTCAT | 59.088 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2342 | 3596 | 3.777478 | TCGTCCCGCTTTACAGATAAAG | 58.223 | 45.455 | 2.99 | 2.99 | 46.95 | 1.85 |
2343 | 3597 | 3.872511 | TCGTCCCGCTTTACAGATAAA | 57.127 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
2344 | 3598 | 3.872511 | TTCGTCCCGCTTTACAGATAA | 57.127 | 42.857 | 0.00 | 0.00 | 0.00 | 1.75 |
2345 | 3599 | 3.777478 | CTTTCGTCCCGCTTTACAGATA | 58.223 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
2346 | 3600 | 2.618053 | CTTTCGTCCCGCTTTACAGAT | 58.382 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
2347 | 3601 | 1.938016 | GCTTTCGTCCCGCTTTACAGA | 60.938 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2348 | 3602 | 0.442699 | GCTTTCGTCCCGCTTTACAG | 59.557 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2351 | 3605 | 0.035739 | AAGGCTTTCGTCCCGCTTTA | 59.964 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2352 | 3606 | 0.822121 | AAAGGCTTTCGTCCCGCTTT | 60.822 | 50.000 | 6.68 | 0.00 | 0.00 | 3.51 |
2353 | 3607 | 0.822121 | AAAAGGCTTTCGTCCCGCTT | 60.822 | 50.000 | 13.76 | 0.00 | 0.00 | 4.68 |
2354 | 3608 | 0.822121 | AAAAAGGCTTTCGTCCCGCT | 60.822 | 50.000 | 13.76 | 0.00 | 0.00 | 5.52 |
2355 | 3609 | 0.386858 | GAAAAAGGCTTTCGTCCCGC | 60.387 | 55.000 | 13.76 | 0.00 | 0.00 | 6.13 |
2356 | 3610 | 0.110373 | CGAAAAAGGCTTTCGTCCCG | 60.110 | 55.000 | 13.76 | 8.65 | 44.25 | 5.14 |
2357 | 3611 | 0.240145 | CCGAAAAAGGCTTTCGTCCC | 59.760 | 55.000 | 13.76 | 0.57 | 46.85 | 4.46 |
2358 | 3612 | 0.949397 | ACCGAAAAAGGCTTTCGTCC | 59.051 | 50.000 | 13.76 | 2.28 | 46.85 | 4.79 |
2359 | 3613 | 3.883631 | TTACCGAAAAAGGCTTTCGTC | 57.116 | 42.857 | 13.76 | 12.48 | 46.85 | 4.20 |
2360 | 3614 | 4.635833 | TTTTACCGAAAAAGGCTTTCGT | 57.364 | 36.364 | 13.76 | 9.60 | 46.85 | 3.85 |
2361 | 3615 | 4.799428 | TGTTTTTACCGAAAAAGGCTTTCG | 59.201 | 37.500 | 13.76 | 13.37 | 43.48 | 3.46 |
2362 | 3616 | 6.650239 | TTGTTTTTACCGAAAAAGGCTTTC | 57.350 | 33.333 | 13.76 | 0.41 | 43.48 | 2.62 |
2363 | 3617 | 7.436430 | TTTTGTTTTTACCGAAAAAGGCTTT | 57.564 | 28.000 | 6.68 | 6.68 | 43.48 | 3.51 |
2364 | 3618 | 7.618502 | ATTTTGTTTTTACCGAAAAAGGCTT | 57.381 | 28.000 | 0.00 | 0.00 | 43.48 | 4.35 |
2365 | 3619 | 7.618502 | AATTTTGTTTTTACCGAAAAAGGCT | 57.381 | 28.000 | 0.00 | 0.00 | 43.48 | 4.58 |
2366 | 3620 | 9.376171 | CATAATTTTGTTTTTACCGAAAAAGGC | 57.624 | 29.630 | 0.00 | 0.00 | 43.48 | 4.35 |
2370 | 3624 | 9.298774 | ACGACATAATTTTGTTTTTACCGAAAA | 57.701 | 25.926 | 2.94 | 0.00 | 34.93 | 2.29 |
2371 | 3625 | 8.744011 | CACGACATAATTTTGTTTTTACCGAAA | 58.256 | 29.630 | 2.94 | 0.00 | 0.00 | 3.46 |
2372 | 3626 | 7.096558 | GCACGACATAATTTTGTTTTTACCGAA | 60.097 | 33.333 | 2.94 | 0.00 | 0.00 | 4.30 |
2373 | 3627 | 6.360148 | GCACGACATAATTTTGTTTTTACCGA | 59.640 | 34.615 | 2.94 | 0.00 | 0.00 | 4.69 |
2374 | 3628 | 6.142480 | TGCACGACATAATTTTGTTTTTACCG | 59.858 | 34.615 | 2.94 | 3.99 | 0.00 | 4.02 |
2375 | 3629 | 7.396190 | TGCACGACATAATTTTGTTTTTACC | 57.604 | 32.000 | 2.94 | 0.00 | 0.00 | 2.85 |
2376 | 3630 | 9.511022 | GATTGCACGACATAATTTTGTTTTTAC | 57.489 | 29.630 | 2.94 | 0.00 | 0.00 | 2.01 |
2377 | 3631 | 9.469807 | AGATTGCACGACATAATTTTGTTTTTA | 57.530 | 25.926 | 2.94 | 0.00 | 0.00 | 1.52 |
2378 | 3632 | 8.364129 | AGATTGCACGACATAATTTTGTTTTT | 57.636 | 26.923 | 2.94 | 0.00 | 0.00 | 1.94 |
2379 | 3633 | 7.945033 | AGATTGCACGACATAATTTTGTTTT | 57.055 | 28.000 | 2.94 | 0.00 | 0.00 | 2.43 |
2380 | 3634 | 7.945033 | AAGATTGCACGACATAATTTTGTTT | 57.055 | 28.000 | 2.94 | 0.00 | 0.00 | 2.83 |
2381 | 3635 | 9.075519 | CATAAGATTGCACGACATAATTTTGTT | 57.924 | 29.630 | 2.94 | 0.00 | 0.00 | 2.83 |
2382 | 3636 | 7.220683 | GCATAAGATTGCACGACATAATTTTGT | 59.779 | 33.333 | 0.77 | 0.77 | 42.31 | 2.83 |
2383 | 3637 | 7.306167 | GGCATAAGATTGCACGACATAATTTTG | 60.306 | 37.037 | 0.00 | 0.00 | 44.59 | 2.44 |
2384 | 3638 | 6.697019 | GGCATAAGATTGCACGACATAATTTT | 59.303 | 34.615 | 0.00 | 0.00 | 44.59 | 1.82 |
2385 | 3639 | 6.208644 | GGCATAAGATTGCACGACATAATTT | 58.791 | 36.000 | 0.00 | 0.00 | 44.59 | 1.82 |
2386 | 3640 | 5.278463 | GGGCATAAGATTGCACGACATAATT | 60.278 | 40.000 | 0.00 | 0.00 | 44.59 | 1.40 |
2387 | 3641 | 4.216257 | GGGCATAAGATTGCACGACATAAT | 59.784 | 41.667 | 0.00 | 0.00 | 44.59 | 1.28 |
2388 | 3642 | 3.563808 | GGGCATAAGATTGCACGACATAA | 59.436 | 43.478 | 0.00 | 0.00 | 44.59 | 1.90 |
2389 | 3643 | 3.138304 | GGGCATAAGATTGCACGACATA | 58.862 | 45.455 | 0.00 | 0.00 | 44.59 | 2.29 |
2390 | 3644 | 1.949525 | GGGCATAAGATTGCACGACAT | 59.050 | 47.619 | 0.00 | 0.00 | 44.59 | 3.06 |
2391 | 3645 | 1.378531 | GGGCATAAGATTGCACGACA | 58.621 | 50.000 | 0.00 | 0.00 | 44.59 | 4.35 |
2395 | 3649 | 3.549794 | AGAAGAGGGCATAAGATTGCAC | 58.450 | 45.455 | 0.00 | 0.00 | 46.66 | 4.57 |
2396 | 3650 | 3.939740 | AGAAGAGGGCATAAGATTGCA | 57.060 | 42.857 | 0.00 | 0.00 | 44.59 | 4.08 |
2397 | 3651 | 5.126067 | TGTAAGAAGAGGGCATAAGATTGC | 58.874 | 41.667 | 0.00 | 0.00 | 42.01 | 3.56 |
2398 | 3652 | 7.116948 | CGTATGTAAGAAGAGGGCATAAGATTG | 59.883 | 40.741 | 0.00 | 0.00 | 0.00 | 2.67 |
2399 | 3653 | 7.155328 | CGTATGTAAGAAGAGGGCATAAGATT | 58.845 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
2405 | 3659 | 3.305720 | TCCGTATGTAAGAAGAGGGCAT | 58.694 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
2410 | 3664 | 6.448006 | CCTGGTAATCCGTATGTAAGAAGAG | 58.552 | 44.000 | 0.00 | 0.00 | 36.30 | 2.85 |
2464 | 3718 | 3.464111 | TCGGTAAGCTTAGGGCATAAC | 57.536 | 47.619 | 6.38 | 0.00 | 44.79 | 1.89 |
2491 | 3745 | 6.730960 | TTATAATATAAAGCGGGGCGAAAG | 57.269 | 37.500 | 0.00 | 0.00 | 0.00 | 2.62 |
2492 | 3746 | 6.348704 | GCTTTATAATATAAAGCGGGGCGAAA | 60.349 | 38.462 | 30.20 | 0.57 | 46.31 | 3.46 |
2493 | 3747 | 5.122711 | GCTTTATAATATAAAGCGGGGCGAA | 59.877 | 40.000 | 30.20 | 0.00 | 46.31 | 4.70 |
2494 | 3748 | 4.632688 | GCTTTATAATATAAAGCGGGGCGA | 59.367 | 41.667 | 30.20 | 0.05 | 46.31 | 5.54 |
2495 | 3749 | 4.905269 | GCTTTATAATATAAAGCGGGGCG | 58.095 | 43.478 | 30.20 | 10.34 | 46.31 | 6.13 |
2502 | 3756 | 7.644490 | TGTGCGGTTGGCTTTATAATATAAAG | 58.356 | 34.615 | 22.11 | 22.11 | 44.05 | 1.85 |
2503 | 3757 | 7.569639 | TGTGCGGTTGGCTTTATAATATAAA | 57.430 | 32.000 | 5.46 | 5.46 | 44.05 | 1.40 |
2504 | 3758 | 7.067129 | TGTTGTGCGGTTGGCTTTATAATATAA | 59.933 | 33.333 | 0.00 | 0.00 | 44.05 | 0.98 |
2505 | 3759 | 6.542735 | TGTTGTGCGGTTGGCTTTATAATATA | 59.457 | 34.615 | 0.00 | 0.00 | 44.05 | 0.86 |
2506 | 3760 | 5.358442 | TGTTGTGCGGTTGGCTTTATAATAT | 59.642 | 36.000 | 0.00 | 0.00 | 44.05 | 1.28 |
2507 | 3761 | 4.700692 | TGTTGTGCGGTTGGCTTTATAATA | 59.299 | 37.500 | 0.00 | 0.00 | 44.05 | 0.98 |
2508 | 3762 | 3.508012 | TGTTGTGCGGTTGGCTTTATAAT | 59.492 | 39.130 | 0.00 | 0.00 | 44.05 | 1.28 |
2509 | 3763 | 2.885266 | TGTTGTGCGGTTGGCTTTATAA | 59.115 | 40.909 | 0.00 | 0.00 | 44.05 | 0.98 |
2510 | 3764 | 2.505405 | TGTTGTGCGGTTGGCTTTATA | 58.495 | 42.857 | 0.00 | 0.00 | 44.05 | 0.98 |
2511 | 3765 | 1.323412 | TGTTGTGCGGTTGGCTTTAT | 58.677 | 45.000 | 0.00 | 0.00 | 44.05 | 1.40 |
2512 | 3766 | 1.066303 | CTTGTTGTGCGGTTGGCTTTA | 59.934 | 47.619 | 0.00 | 0.00 | 44.05 | 1.85 |
2513 | 3767 | 0.179113 | CTTGTTGTGCGGTTGGCTTT | 60.179 | 50.000 | 0.00 | 0.00 | 44.05 | 3.51 |
2514 | 3768 | 1.437160 | CTTGTTGTGCGGTTGGCTT | 59.563 | 52.632 | 0.00 | 0.00 | 44.05 | 4.35 |
2515 | 3769 | 3.119193 | CTTGTTGTGCGGTTGGCT | 58.881 | 55.556 | 0.00 | 0.00 | 44.05 | 4.75 |
2516 | 3770 | 2.658268 | GCTTGTTGTGCGGTTGGC | 60.658 | 61.111 | 0.00 | 0.00 | 43.96 | 4.52 |
2517 | 3771 | 0.664166 | GATGCTTGTTGTGCGGTTGG | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2518 | 3772 | 0.664166 | GGATGCTTGTTGTGCGGTTG | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2519 | 3773 | 1.106351 | TGGATGCTTGTTGTGCGGTT | 61.106 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
2520 | 3774 | 1.106351 | TTGGATGCTTGTTGTGCGGT | 61.106 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2521 | 3775 | 0.664166 | GTTGGATGCTTGTTGTGCGG | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2522 | 3776 | 0.030504 | TGTTGGATGCTTGTTGTGCG | 59.969 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2523 | 3777 | 2.129607 | CTTGTTGGATGCTTGTTGTGC | 58.870 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
2524 | 3778 | 2.101249 | ACCTTGTTGGATGCTTGTTGTG | 59.899 | 45.455 | 0.00 | 0.00 | 39.71 | 3.33 |
2525 | 3779 | 2.362077 | GACCTTGTTGGATGCTTGTTGT | 59.638 | 45.455 | 0.00 | 0.00 | 39.71 | 3.32 |
2526 | 3780 | 2.288395 | GGACCTTGTTGGATGCTTGTTG | 60.288 | 50.000 | 0.00 | 0.00 | 39.71 | 3.33 |
2527 | 3781 | 1.963515 | GGACCTTGTTGGATGCTTGTT | 59.036 | 47.619 | 0.00 | 0.00 | 39.71 | 2.83 |
2528 | 3782 | 1.133513 | TGGACCTTGTTGGATGCTTGT | 60.134 | 47.619 | 0.00 | 0.00 | 39.71 | 3.16 |
2529 | 3783 | 1.619654 | TGGACCTTGTTGGATGCTTG | 58.380 | 50.000 | 0.00 | 0.00 | 39.71 | 4.01 |
2530 | 3784 | 1.963515 | GTTGGACCTTGTTGGATGCTT | 59.036 | 47.619 | 0.00 | 0.00 | 39.71 | 3.91 |
2531 | 3785 | 1.133513 | TGTTGGACCTTGTTGGATGCT | 60.134 | 47.619 | 0.00 | 0.00 | 39.71 | 3.79 |
2532 | 3786 | 1.000274 | GTGTTGGACCTTGTTGGATGC | 60.000 | 52.381 | 0.00 | 0.00 | 39.71 | 3.91 |
2533 | 3787 | 2.294233 | CTGTGTTGGACCTTGTTGGATG | 59.706 | 50.000 | 0.00 | 0.00 | 39.71 | 3.51 |
2534 | 3788 | 2.174639 | TCTGTGTTGGACCTTGTTGGAT | 59.825 | 45.455 | 0.00 | 0.00 | 39.71 | 3.41 |
2535 | 3789 | 1.562008 | TCTGTGTTGGACCTTGTTGGA | 59.438 | 47.619 | 0.00 | 0.00 | 39.71 | 3.53 |
2536 | 3790 | 2.051334 | TCTGTGTTGGACCTTGTTGG | 57.949 | 50.000 | 0.00 | 0.00 | 42.93 | 3.77 |
2537 | 3791 | 4.024048 | GTGTATCTGTGTTGGACCTTGTTG | 60.024 | 45.833 | 0.00 | 0.00 | 0.00 | 3.33 |
2538 | 3792 | 4.134563 | GTGTATCTGTGTTGGACCTTGTT | 58.865 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2539 | 3793 | 3.740115 | GTGTATCTGTGTTGGACCTTGT | 58.260 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2540 | 3794 | 2.736721 | CGTGTATCTGTGTTGGACCTTG | 59.263 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2541 | 3795 | 2.870435 | GCGTGTATCTGTGTTGGACCTT | 60.870 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
2542 | 3796 | 1.337823 | GCGTGTATCTGTGTTGGACCT | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2543 | 3797 | 1.076332 | GCGTGTATCTGTGTTGGACC | 58.924 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2544 | 3798 | 1.459592 | GTGCGTGTATCTGTGTTGGAC | 59.540 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
2545 | 3799 | 1.069358 | TGTGCGTGTATCTGTGTTGGA | 59.931 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
2546 | 3800 | 1.194547 | GTGTGCGTGTATCTGTGTTGG | 59.805 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
2547 | 3801 | 1.864082 | TGTGTGCGTGTATCTGTGTTG | 59.136 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
2548 | 3802 | 1.864711 | GTGTGTGCGTGTATCTGTGTT | 59.135 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
2549 | 3803 | 1.202475 | TGTGTGTGCGTGTATCTGTGT | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
2550 | 3804 | 1.192312 | GTGTGTGTGCGTGTATCTGTG | 59.808 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
2551 | 3805 | 1.202475 | TGTGTGTGTGCGTGTATCTGT | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
2552 | 3806 | 1.192312 | GTGTGTGTGTGCGTGTATCTG | 59.808 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
2553 | 3807 | 1.497991 | GTGTGTGTGTGCGTGTATCT | 58.502 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2554 | 3808 | 0.160813 | CGTGTGTGTGTGCGTGTATC | 59.839 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2555 | 3809 | 1.218875 | CCGTGTGTGTGTGCGTGTAT | 61.219 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2556 | 3810 | 1.878975 | CCGTGTGTGTGTGCGTGTA | 60.879 | 57.895 | 0.00 | 0.00 | 0.00 | 2.90 |
2557 | 3811 | 3.192230 | CCGTGTGTGTGTGCGTGT | 61.192 | 61.111 | 0.00 | 0.00 | 0.00 | 4.49 |
2558 | 3812 | 2.360091 | CTTCCGTGTGTGTGTGCGTG | 62.360 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2559 | 3813 | 2.125472 | TTCCGTGTGTGTGTGCGT | 60.125 | 55.556 | 0.00 | 0.00 | 0.00 | 5.24 |
2560 | 3814 | 2.089433 | GACTTCCGTGTGTGTGTGCG | 62.089 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2561 | 3815 | 1.641677 | GACTTCCGTGTGTGTGTGC | 59.358 | 57.895 | 0.00 | 0.00 | 0.00 | 4.57 |
2562 | 3816 | 0.461163 | TGGACTTCCGTGTGTGTGTG | 60.461 | 55.000 | 0.00 | 0.00 | 39.43 | 3.82 |
2563 | 3817 | 0.461339 | GTGGACTTCCGTGTGTGTGT | 60.461 | 55.000 | 0.00 | 0.00 | 39.43 | 3.72 |
2564 | 3818 | 0.461163 | TGTGGACTTCCGTGTGTGTG | 60.461 | 55.000 | 0.00 | 0.00 | 39.43 | 3.82 |
2565 | 3819 | 0.179084 | CTGTGGACTTCCGTGTGTGT | 60.179 | 55.000 | 0.00 | 0.00 | 39.43 | 3.72 |
2566 | 3820 | 0.880278 | CCTGTGGACTTCCGTGTGTG | 60.880 | 60.000 | 0.00 | 0.00 | 39.43 | 3.82 |
2567 | 3821 | 1.046472 | TCCTGTGGACTTCCGTGTGT | 61.046 | 55.000 | 0.00 | 0.00 | 39.43 | 3.72 |
2568 | 3822 | 0.105964 | TTCCTGTGGACTTCCGTGTG | 59.894 | 55.000 | 0.00 | 0.00 | 39.43 | 3.82 |
2569 | 3823 | 0.106149 | GTTCCTGTGGACTTCCGTGT | 59.894 | 55.000 | 0.00 | 0.00 | 39.43 | 4.49 |
2570 | 3824 | 0.105964 | TGTTCCTGTGGACTTCCGTG | 59.894 | 55.000 | 0.00 | 0.00 | 39.43 | 4.94 |
2571 | 3825 | 1.056660 | ATGTTCCTGTGGACTTCCGT | 58.943 | 50.000 | 0.00 | 0.00 | 39.43 | 4.69 |
2572 | 3826 | 3.328382 | TTATGTTCCTGTGGACTTCCG | 57.672 | 47.619 | 0.00 | 0.00 | 39.43 | 4.30 |
2573 | 3827 | 4.652822 | ACTTTATGTTCCTGTGGACTTCC | 58.347 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
2574 | 3828 | 6.465084 | ACTACTTTATGTTCCTGTGGACTTC | 58.535 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2575 | 3829 | 6.435292 | ACTACTTTATGTTCCTGTGGACTT | 57.565 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
2576 | 3830 | 6.231211 | CAACTACTTTATGTTCCTGTGGACT | 58.769 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2577 | 3831 | 5.411669 | CCAACTACTTTATGTTCCTGTGGAC | 59.588 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2578 | 3832 | 5.308497 | TCCAACTACTTTATGTTCCTGTGGA | 59.692 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2579 | 3833 | 5.556915 | TCCAACTACTTTATGTTCCTGTGG | 58.443 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
2580 | 3834 | 6.149474 | CCTTCCAACTACTTTATGTTCCTGTG | 59.851 | 42.308 | 0.00 | 0.00 | 0.00 | 3.66 |
2581 | 3835 | 6.238648 | CCTTCCAACTACTTTATGTTCCTGT | 58.761 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2582 | 3836 | 5.648092 | CCCTTCCAACTACTTTATGTTCCTG | 59.352 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2583 | 3837 | 5.312443 | ACCCTTCCAACTACTTTATGTTCCT | 59.688 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2584 | 3838 | 5.567430 | ACCCTTCCAACTACTTTATGTTCC | 58.433 | 41.667 | 0.00 | 0.00 | 0.00 | 3.62 |
2585 | 3839 | 6.235664 | TGACCCTTCCAACTACTTTATGTTC | 58.764 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2586 | 3840 | 6.195600 | TGACCCTTCCAACTACTTTATGTT | 57.804 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
2587 | 3841 | 5.836024 | TGACCCTTCCAACTACTTTATGT | 57.164 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
2588 | 3842 | 6.404734 | GCATTGACCCTTCCAACTACTTTATG | 60.405 | 42.308 | 0.00 | 0.00 | 0.00 | 1.90 |
2589 | 3843 | 5.652452 | GCATTGACCCTTCCAACTACTTTAT | 59.348 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2590 | 3844 | 5.007682 | GCATTGACCCTTCCAACTACTTTA | 58.992 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
2591 | 3845 | 3.826729 | GCATTGACCCTTCCAACTACTTT | 59.173 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
2592 | 3846 | 3.074538 | AGCATTGACCCTTCCAACTACTT | 59.925 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
2593 | 3847 | 2.644798 | AGCATTGACCCTTCCAACTACT | 59.355 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2594 | 3848 | 2.749621 | CAGCATTGACCCTTCCAACTAC | 59.250 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2595 | 3849 | 2.642311 | TCAGCATTGACCCTTCCAACTA | 59.358 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2596 | 3850 | 1.425066 | TCAGCATTGACCCTTCCAACT | 59.575 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2597 | 3851 | 1.815003 | CTCAGCATTGACCCTTCCAAC | 59.185 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
2598 | 3852 | 1.272092 | CCTCAGCATTGACCCTTCCAA | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
2599 | 3853 | 0.329261 | CCTCAGCATTGACCCTTCCA | 59.671 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2600 | 3854 | 0.394899 | CCCTCAGCATTGACCCTTCC | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2601 | 3855 | 1.034292 | GCCCTCAGCATTGACCCTTC | 61.034 | 60.000 | 0.00 | 0.00 | 42.97 | 3.46 |
2602 | 3856 | 1.000396 | GCCCTCAGCATTGACCCTT | 60.000 | 57.895 | 0.00 | 0.00 | 42.97 | 3.95 |
2603 | 3857 | 2.679716 | GCCCTCAGCATTGACCCT | 59.320 | 61.111 | 0.00 | 0.00 | 42.97 | 4.34 |
2613 | 3867 | 1.102809 | TTGTTGTGCTGTGCCCTCAG | 61.103 | 55.000 | 0.00 | 0.00 | 38.35 | 3.35 |
2614 | 3868 | 1.077140 | TTGTTGTGCTGTGCCCTCA | 60.077 | 52.632 | 0.00 | 0.00 | 0.00 | 3.86 |
2615 | 3869 | 1.656441 | CTTGTTGTGCTGTGCCCTC | 59.344 | 57.895 | 0.00 | 0.00 | 0.00 | 4.30 |
2616 | 3870 | 2.492773 | GCTTGTTGTGCTGTGCCCT | 61.493 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
2617 | 3871 | 2.028043 | GCTTGTTGTGCTGTGCCC | 59.972 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
2618 | 3872 | 2.028043 | GGCTTGTTGTGCTGTGCC | 59.972 | 61.111 | 0.00 | 0.00 | 0.00 | 5.01 |
2619 | 3873 | 1.172180 | TAGGGCTTGTTGTGCTGTGC | 61.172 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2620 | 3874 | 1.317613 | TTAGGGCTTGTTGTGCTGTG | 58.682 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2621 | 3875 | 1.681264 | GTTTAGGGCTTGTTGTGCTGT | 59.319 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
2622 | 3876 | 1.680735 | TGTTTAGGGCTTGTTGTGCTG | 59.319 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
2623 | 3877 | 1.681264 | GTGTTTAGGGCTTGTTGTGCT | 59.319 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
2624 | 3878 | 1.407258 | TGTGTTTAGGGCTTGTTGTGC | 59.593 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
2625 | 3879 | 3.791973 | TTGTGTTTAGGGCTTGTTGTG | 57.208 | 42.857 | 0.00 | 0.00 | 0.00 | 3.33 |
2626 | 3880 | 4.021016 | TGTTTTGTGTTTAGGGCTTGTTGT | 60.021 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
2627 | 3881 | 4.328712 | GTGTTTTGTGTTTAGGGCTTGTTG | 59.671 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
2628 | 3882 | 4.021016 | TGTGTTTTGTGTTTAGGGCTTGTT | 60.021 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
2629 | 3883 | 3.511934 | TGTGTTTTGTGTTTAGGGCTTGT | 59.488 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2630 | 3884 | 3.862845 | GTGTGTTTTGTGTTTAGGGCTTG | 59.137 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
2631 | 3885 | 3.511934 | TGTGTGTTTTGTGTTTAGGGCTT | 59.488 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
2632 | 3886 | 3.093057 | TGTGTGTTTTGTGTTTAGGGCT | 58.907 | 40.909 | 0.00 | 0.00 | 0.00 | 5.19 |
2633 | 3887 | 3.183754 | GTGTGTGTTTTGTGTTTAGGGC | 58.816 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
2634 | 3888 | 3.430931 | CGTGTGTGTTTTGTGTTTAGGG | 58.569 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
2635 | 3889 | 2.849473 | GCGTGTGTGTTTTGTGTTTAGG | 59.151 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
2636 | 3890 | 2.849473 | GGCGTGTGTGTTTTGTGTTTAG | 59.151 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
2637 | 3891 | 2.228103 | TGGCGTGTGTGTTTTGTGTTTA | 59.772 | 40.909 | 0.00 | 0.00 | 0.00 | 2.01 |
2638 | 3892 | 1.000163 | TGGCGTGTGTGTTTTGTGTTT | 60.000 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
2639 | 3893 | 0.598562 | TGGCGTGTGTGTTTTGTGTT | 59.401 | 45.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2640 | 3894 | 0.109504 | GTGGCGTGTGTGTTTTGTGT | 60.110 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2641 | 3895 | 0.109551 | TGTGGCGTGTGTGTTTTGTG | 60.110 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2642 | 3896 | 0.170116 | CTGTGGCGTGTGTGTTTTGT | 59.830 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2643 | 3897 | 0.449786 | TCTGTGGCGTGTGTGTTTTG | 59.550 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2644 | 3898 | 0.732571 | CTCTGTGGCGTGTGTGTTTT | 59.267 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2645 | 3899 | 1.714899 | GCTCTGTGGCGTGTGTGTTT | 61.715 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2646 | 3900 | 2.180204 | GCTCTGTGGCGTGTGTGTT | 61.180 | 57.895 | 0.00 | 0.00 | 0.00 | 3.32 |
2647 | 3901 | 2.588877 | GCTCTGTGGCGTGTGTGT | 60.589 | 61.111 | 0.00 | 0.00 | 0.00 | 3.72 |
2648 | 3902 | 2.280389 | AGCTCTGTGGCGTGTGTG | 60.280 | 61.111 | 0.00 | 0.00 | 37.29 | 3.82 |
2649 | 3903 | 2.280389 | CAGCTCTGTGGCGTGTGT | 60.280 | 61.111 | 0.00 | 0.00 | 37.29 | 3.72 |
2650 | 3904 | 3.720193 | GCAGCTCTGTGGCGTGTG | 61.720 | 66.667 | 0.00 | 0.00 | 37.29 | 3.82 |
2651 | 3905 | 4.996434 | GGCAGCTCTGTGGCGTGT | 62.996 | 66.667 | 0.00 | 0.00 | 37.29 | 4.49 |
2654 | 3908 | 3.315142 | TTAGGGCAGCTCTGTGGCG | 62.315 | 63.158 | 4.50 | 0.00 | 43.87 | 5.69 |
2655 | 3909 | 1.451028 | CTTAGGGCAGCTCTGTGGC | 60.451 | 63.158 | 4.50 | 0.00 | 42.23 | 5.01 |
2656 | 3910 | 1.451028 | GCTTAGGGCAGCTCTGTGG | 60.451 | 63.158 | 4.50 | 0.00 | 41.35 | 4.17 |
2657 | 3911 | 4.215349 | GCTTAGGGCAGCTCTGTG | 57.785 | 61.111 | 4.50 | 0.00 | 41.35 | 3.66 |
2674 | 3928 | 5.561679 | AGTTACCCCAAAGAAGCTTCTAAG | 58.438 | 41.667 | 28.67 | 21.98 | 36.28 | 2.18 |
2675 | 3929 | 5.578157 | AGTTACCCCAAAGAAGCTTCTAA | 57.422 | 39.130 | 28.67 | 14.65 | 36.28 | 2.10 |
2676 | 3930 | 6.691255 | TTAGTTACCCCAAAGAAGCTTCTA | 57.309 | 37.500 | 28.67 | 9.07 | 36.28 | 2.10 |
2677 | 3931 | 5.578157 | TTAGTTACCCCAAAGAAGCTTCT | 57.422 | 39.130 | 23.49 | 23.49 | 39.74 | 2.85 |
2678 | 3932 | 6.644248 | TTTTAGTTACCCCAAAGAAGCTTC | 57.356 | 37.500 | 19.11 | 19.11 | 0.00 | 3.86 |
2740 | 3994 | 8.203681 | TCAATGATCTCCTCATACAATCTCAT | 57.796 | 34.615 | 0.00 | 0.00 | 44.03 | 2.90 |
2741 | 3995 | 7.607615 | TCAATGATCTCCTCATACAATCTCA | 57.392 | 36.000 | 0.00 | 0.00 | 44.03 | 3.27 |
2744 | 3998 | 8.674263 | ACTTTCAATGATCTCCTCATACAATC | 57.326 | 34.615 | 0.00 | 0.00 | 44.03 | 2.67 |
2789 | 4048 | 6.426980 | TCAGTATTGCATCTGAAATGACAC | 57.573 | 37.500 | 12.25 | 0.00 | 37.69 | 3.67 |
2804 | 4063 | 7.218145 | GTACGAAGGTACATGTTCAGTATTG | 57.782 | 40.000 | 2.30 | 0.00 | 46.65 | 1.90 |
2814 | 4073 | 7.957550 | GCAGGATGGAGTACGAAGGTACATG | 62.958 | 52.000 | 7.10 | 0.00 | 43.78 | 3.21 |
2820 | 4079 | 1.067821 | GAGCAGGATGGAGTACGAAGG | 59.932 | 57.143 | 0.00 | 0.00 | 35.86 | 3.46 |
2824 | 4083 | 1.410517 | ACATGAGCAGGATGGAGTACG | 59.589 | 52.381 | 0.00 | 0.00 | 35.86 | 3.67 |
2827 | 4086 | 2.170187 | GAGAACATGAGCAGGATGGAGT | 59.830 | 50.000 | 0.00 | 0.00 | 35.86 | 3.85 |
2833 | 4092 | 1.980765 | ACAAGGAGAACATGAGCAGGA | 59.019 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
2835 | 4094 | 5.911752 | AGTATACAAGGAGAACATGAGCAG | 58.088 | 41.667 | 5.50 | 0.00 | 0.00 | 4.24 |
2843 | 4102 | 8.265764 | ACCTCCATTTTAGTATACAAGGAGAAC | 58.734 | 37.037 | 18.58 | 0.00 | 43.07 | 3.01 |
2845 | 4104 | 7.070821 | GGACCTCCATTTTAGTATACAAGGAGA | 59.929 | 40.741 | 18.58 | 3.67 | 43.07 | 3.71 |
2846 | 4105 | 7.071321 | AGGACCTCCATTTTAGTATACAAGGAG | 59.929 | 40.741 | 5.50 | 10.85 | 40.76 | 3.69 |
2901 | 4160 | 6.262944 | AGCAAACCTATTATCATTCATCGCAA | 59.737 | 34.615 | 0.00 | 0.00 | 0.00 | 4.85 |
2927 | 4245 | 3.192422 | AGAGGAGACTTGAATGTCACTCG | 59.808 | 47.826 | 0.00 | 0.00 | 44.43 | 4.18 |
2992 | 4310 | 5.594317 | ACTAGTGGTTCAGCTTCACAAAAAT | 59.406 | 36.000 | 0.00 | 0.00 | 34.17 | 1.82 |
3010 | 4328 | 9.469807 | GATTGTTGGTGAGATAAGATACTAGTG | 57.530 | 37.037 | 5.39 | 0.00 | 0.00 | 2.74 |
3195 | 4514 | 5.412594 | TGCTAAATGAACTCAGACATGGTTC | 59.587 | 40.000 | 0.00 | 1.15 | 37.24 | 3.62 |
3266 | 4597 | 7.882271 | ACAAATCTACAATCTTGAGAGCTCTTT | 59.118 | 33.333 | 19.36 | 4.56 | 0.00 | 2.52 |
3282 | 4613 | 5.874810 | GCATGACAGGAACTACAAATCTACA | 59.125 | 40.000 | 0.00 | 0.00 | 36.02 | 2.74 |
3283 | 4614 | 6.109359 | AGCATGACAGGAACTACAAATCTAC | 58.891 | 40.000 | 0.00 | 0.00 | 36.02 | 2.59 |
3284 | 4615 | 6.299805 | AGCATGACAGGAACTACAAATCTA | 57.700 | 37.500 | 0.00 | 0.00 | 36.02 | 1.98 |
3285 | 4616 | 5.171339 | AGCATGACAGGAACTACAAATCT | 57.829 | 39.130 | 0.00 | 0.00 | 36.02 | 2.40 |
3286 | 4617 | 5.874810 | TGTAGCATGACAGGAACTACAAATC | 59.125 | 40.000 | 0.00 | 0.00 | 40.02 | 2.17 |
3287 | 4618 | 5.804639 | TGTAGCATGACAGGAACTACAAAT | 58.195 | 37.500 | 0.00 | 0.00 | 40.02 | 2.32 |
3288 | 4619 | 5.222079 | TGTAGCATGACAGGAACTACAAA | 57.778 | 39.130 | 0.00 | 0.00 | 40.02 | 2.83 |
3289 | 4620 | 4.882842 | TGTAGCATGACAGGAACTACAA | 57.117 | 40.909 | 0.00 | 0.00 | 40.02 | 2.41 |
3290 | 4621 | 4.562757 | GGTTGTAGCATGACAGGAACTACA | 60.563 | 45.833 | 0.00 | 0.00 | 40.93 | 2.74 |
3291 | 4622 | 3.933332 | GGTTGTAGCATGACAGGAACTAC | 59.067 | 47.826 | 0.00 | 0.00 | 36.02 | 2.73 |
3316 | 4651 | 6.712095 | TCAGATGCTGAACAAAAAGATACACT | 59.288 | 34.615 | 0.00 | 0.00 | 37.57 | 3.55 |
3347 | 4682 | 6.517605 | CCTCCATTAGAGTTAGCTAAGAACC | 58.482 | 44.000 | 6.38 | 0.00 | 41.47 | 3.62 |
3430 | 4976 | 0.179004 | ATCGCCCTGTGAAACCAACA | 60.179 | 50.000 | 0.00 | 0.00 | 34.36 | 3.33 |
3446 | 4992 | 5.531122 | TCCCAAGGTAATCAAGAGTATCG | 57.469 | 43.478 | 0.00 | 0.00 | 42.67 | 2.92 |
3555 | 5101 | 4.957296 | AGTATGGGACCGAAACATGATAC | 58.043 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
3652 | 5211 | 9.905713 | TTAAAGAATTATATGTGGAGAGTTGCT | 57.094 | 29.630 | 0.00 | 0.00 | 0.00 | 3.91 |
3653 | 5212 | 9.937175 | GTTAAAGAATTATATGTGGAGAGTTGC | 57.063 | 33.333 | 0.00 | 0.00 | 0.00 | 4.17 |
3705 | 5360 | 5.841957 | AGTATGAAATGACAAGGGAATGC | 57.158 | 39.130 | 0.00 | 0.00 | 0.00 | 3.56 |
3915 | 5571 | 3.005897 | TCTCCTTCACCTTGAGTTCTTCG | 59.994 | 47.826 | 0.00 | 0.00 | 0.00 | 3.79 |
4067 | 5723 | 6.210185 | AGCAGTTAGAATGCCTCAAAGAAAAT | 59.790 | 34.615 | 0.00 | 0.00 | 44.97 | 1.82 |
4068 | 5724 | 5.536161 | AGCAGTTAGAATGCCTCAAAGAAAA | 59.464 | 36.000 | 0.00 | 0.00 | 44.97 | 2.29 |
4100 | 5756 | 4.463209 | ACAAACTGATCAATGTAAACGCG | 58.537 | 39.130 | 3.53 | 3.53 | 0.00 | 6.01 |
4362 | 6058 | 5.247564 | CCCTCCGTCCCATAATATAAGAACA | 59.752 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4417 | 6121 | 5.179368 | CCATAACTCCACAACTGTACAACTG | 59.821 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4418 | 6122 | 5.163237 | ACCATAACTCCACAACTGTACAACT | 60.163 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4450 | 6154 | 1.293179 | GGCACCCACAATTTCTGCC | 59.707 | 57.895 | 0.00 | 0.00 | 40.68 | 4.85 |
4543 | 6247 | 3.243569 | CCCAGCAAAGTATCTACTCCTCG | 60.244 | 52.174 | 0.00 | 0.00 | 34.99 | 4.63 |
4546 | 6250 | 4.162509 | ACTTCCCAGCAAAGTATCTACTCC | 59.837 | 45.833 | 0.00 | 0.00 | 35.25 | 3.85 |
4550 | 6254 | 6.430000 | GTCAAAACTTCCCAGCAAAGTATCTA | 59.570 | 38.462 | 0.00 | 0.00 | 35.96 | 1.98 |
4561 | 6265 | 2.886523 | TCTGCATGTCAAAACTTCCCAG | 59.113 | 45.455 | 0.00 | 0.00 | 0.00 | 4.45 |
4657 | 8740 | 2.790433 | TGGAGTAAATGCTGGTTGGAC | 58.210 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
4659 | 8742 | 4.806640 | AAATGGAGTAAATGCTGGTTGG | 57.193 | 40.909 | 0.00 | 0.00 | 0.00 | 3.77 |
4680 | 8763 | 3.357203 | TGGGAGGCGTATTATGCAAAAA | 58.643 | 40.909 | 9.96 | 0.00 | 0.00 | 1.94 |
4681 | 8764 | 3.006112 | TGGGAGGCGTATTATGCAAAA | 57.994 | 42.857 | 9.96 | 0.00 | 0.00 | 2.44 |
4682 | 8765 | 2.685897 | GTTGGGAGGCGTATTATGCAAA | 59.314 | 45.455 | 9.96 | 0.00 | 0.00 | 3.68 |
4683 | 8766 | 2.092646 | AGTTGGGAGGCGTATTATGCAA | 60.093 | 45.455 | 9.96 | 0.00 | 0.00 | 4.08 |
4684 | 8767 | 1.488812 | AGTTGGGAGGCGTATTATGCA | 59.511 | 47.619 | 9.96 | 0.00 | 0.00 | 3.96 |
4685 | 8768 | 2.256117 | AGTTGGGAGGCGTATTATGC | 57.744 | 50.000 | 0.00 | 0.00 | 0.00 | 3.14 |
4686 | 8769 | 4.866508 | TCTAGTTGGGAGGCGTATTATG | 57.133 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
4687 | 8770 | 4.262506 | GCTTCTAGTTGGGAGGCGTATTAT | 60.263 | 45.833 | 0.00 | 0.00 | 0.00 | 1.28 |
4688 | 8771 | 3.069158 | GCTTCTAGTTGGGAGGCGTATTA | 59.931 | 47.826 | 0.00 | 0.00 | 0.00 | 0.98 |
4689 | 8772 | 2.158943 | GCTTCTAGTTGGGAGGCGTATT | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4707 | 8790 | 3.197766 | TGATGAGTAATGGAACTCGGCTT | 59.802 | 43.478 | 0.06 | 0.00 | 34.56 | 4.35 |
4713 | 8796 | 6.058183 | GGCAGTTATGATGAGTAATGGAACT | 58.942 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4787 | 8870 | 0.741221 | GACGAGAAGGCGAGGCAATT | 60.741 | 55.000 | 0.00 | 0.00 | 34.83 | 2.32 |
4813 | 8896 | 4.021894 | GCTATCATGTTCACGGATCCTAGT | 60.022 | 45.833 | 10.75 | 0.00 | 0.00 | 2.57 |
4823 | 8906 | 3.812053 | GAGGACCATGCTATCATGTTCAC | 59.188 | 47.826 | 6.46 | 0.00 | 46.64 | 3.18 |
4842 | 8925 | 0.977395 | AGAAAAGAGGGTGGTCGAGG | 59.023 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4886 | 8970 | 2.297701 | TGACACTGAGGGAGCAAAAAC | 58.702 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
4928 | 9012 | 2.892852 | TGAGGGGAAAAGTCTTGCATTG | 59.107 | 45.455 | 0.00 | 0.00 | 0.00 | 2.82 |
4937 | 9021 | 2.959030 | GCTTGAGTTTGAGGGGAAAAGT | 59.041 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
4938 | 9022 | 2.297315 | GGCTTGAGTTTGAGGGGAAAAG | 59.703 | 50.000 | 0.00 | 0.00 | 0.00 | 2.27 |
4939 | 9023 | 2.091333 | AGGCTTGAGTTTGAGGGGAAAA | 60.091 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
4940 | 9024 | 1.499007 | AGGCTTGAGTTTGAGGGGAAA | 59.501 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
4941 | 9025 | 1.149101 | AGGCTTGAGTTTGAGGGGAA | 58.851 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
4942 | 9026 | 1.149101 | AAGGCTTGAGTTTGAGGGGA | 58.851 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
4943 | 9027 | 2.001076 | AAAGGCTTGAGTTTGAGGGG | 57.999 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4944 | 9028 | 3.225940 | AGAAAAGGCTTGAGTTTGAGGG | 58.774 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
4945 | 9029 | 3.254411 | GGAGAAAAGGCTTGAGTTTGAGG | 59.746 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
4946 | 9030 | 4.140536 | AGGAGAAAAGGCTTGAGTTTGAG | 58.859 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4947 | 9031 | 4.137543 | GAGGAGAAAAGGCTTGAGTTTGA | 58.862 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
4948 | 9032 | 4.023365 | CAGAGGAGAAAAGGCTTGAGTTTG | 60.023 | 45.833 | 0.00 | 0.00 | 0.00 | 2.93 |
4949 | 9033 | 4.140536 | CAGAGGAGAAAAGGCTTGAGTTT | 58.859 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
4950 | 9034 | 3.749226 | CAGAGGAGAAAAGGCTTGAGTT | 58.251 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
4951 | 9035 | 2.551938 | GCAGAGGAGAAAAGGCTTGAGT | 60.552 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4952 | 9036 | 2.083002 | GCAGAGGAGAAAAGGCTTGAG | 58.917 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
4953 | 9037 | 1.701847 | AGCAGAGGAGAAAAGGCTTGA | 59.298 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
4954 | 9038 | 2.197283 | AGCAGAGGAGAAAAGGCTTG | 57.803 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
4955 | 9039 | 2.355615 | GCTAGCAGAGGAGAAAAGGCTT | 60.356 | 50.000 | 10.63 | 0.00 | 33.10 | 4.35 |
4956 | 9040 | 1.209261 | GCTAGCAGAGGAGAAAAGGCT | 59.791 | 52.381 | 10.63 | 0.00 | 35.50 | 4.58 |
4957 | 9041 | 1.662517 | GCTAGCAGAGGAGAAAAGGC | 58.337 | 55.000 | 10.63 | 0.00 | 0.00 | 4.35 |
4958 | 9042 | 1.205893 | ACGCTAGCAGAGGAGAAAAGG | 59.794 | 52.381 | 16.45 | 0.00 | 0.00 | 3.11 |
4971 | 9055 | 2.536928 | CCGCAAATAGAAACACGCTAGC | 60.537 | 50.000 | 4.06 | 4.06 | 0.00 | 3.42 |
4987 | 9071 | 3.283684 | CAAAGGTGACGGCCGCAA | 61.284 | 61.111 | 28.58 | 11.41 | 0.00 | 4.85 |
5038 | 9122 | 3.844211 | ACCTAGGGATAGTTGCACTTTCA | 59.156 | 43.478 | 14.81 | 0.00 | 29.36 | 2.69 |
5039 | 9123 | 4.192317 | CACCTAGGGATAGTTGCACTTTC | 58.808 | 47.826 | 14.81 | 0.00 | 0.00 | 2.62 |
5040 | 9124 | 3.054361 | CCACCTAGGGATAGTTGCACTTT | 60.054 | 47.826 | 14.81 | 0.00 | 0.00 | 2.66 |
5041 | 9125 | 2.505819 | CCACCTAGGGATAGTTGCACTT | 59.494 | 50.000 | 14.81 | 0.00 | 0.00 | 3.16 |
5042 | 9126 | 2.119495 | CCACCTAGGGATAGTTGCACT | 58.881 | 52.381 | 14.81 | 0.00 | 0.00 | 4.40 |
5043 | 9127 | 1.838077 | ACCACCTAGGGATAGTTGCAC | 59.162 | 52.381 | 14.81 | 0.00 | 43.89 | 4.57 |
5044 | 9128 | 2.263895 | ACCACCTAGGGATAGTTGCA | 57.736 | 50.000 | 14.81 | 0.00 | 43.89 | 4.08 |
5045 | 9129 | 3.646736 | AAACCACCTAGGGATAGTTGC | 57.353 | 47.619 | 14.81 | 0.00 | 43.89 | 4.17 |
5046 | 9130 | 4.263771 | ACCAAAACCACCTAGGGATAGTTG | 60.264 | 45.833 | 14.81 | 11.15 | 43.89 | 3.16 |
5047 | 9131 | 3.920841 | ACCAAAACCACCTAGGGATAGTT | 59.079 | 43.478 | 14.81 | 7.87 | 43.89 | 2.24 |
5048 | 9132 | 3.538387 | ACCAAAACCACCTAGGGATAGT | 58.462 | 45.455 | 14.81 | 1.38 | 43.89 | 2.12 |
5049 | 9133 | 5.703730 | TTACCAAAACCACCTAGGGATAG | 57.296 | 43.478 | 14.81 | 0.69 | 43.89 | 2.08 |
5050 | 9134 | 6.217900 | TGAATTACCAAAACCACCTAGGGATA | 59.782 | 38.462 | 14.81 | 0.00 | 43.89 | 2.59 |
5051 | 9135 | 5.015817 | TGAATTACCAAAACCACCTAGGGAT | 59.984 | 40.000 | 14.81 | 0.00 | 43.89 | 3.85 |
5052 | 9136 | 4.354387 | TGAATTACCAAAACCACCTAGGGA | 59.646 | 41.667 | 14.81 | 0.00 | 43.89 | 4.20 |
5053 | 9137 | 4.668636 | TGAATTACCAAAACCACCTAGGG | 58.331 | 43.478 | 14.81 | 1.73 | 43.89 | 3.53 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.