Multiple sequence alignment - TraesCS5B01G174900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G174900 chr5B 100.000 3479 0 0 1 3479 321208259 321211737 0.000000e+00 6425
1 TraesCS5B01G174900 chr5B 89.223 399 25 4 167 549 33888663 33889059 1.880000e-132 483
2 TraesCS5B01G174900 chr5B 87.970 399 30 4 167 549 31435533 31435137 4.090000e-124 455
3 TraesCS5B01G174900 chr5B 83.702 362 43 4 202 549 52321921 52322280 9.310000e-86 327
4 TraesCS5B01G174900 chr5A 95.030 2656 103 15 846 3479 375282770 375285418 0.000000e+00 4146
5 TraesCS5B01G174900 chr5A 83.287 359 44 9 205 549 32948181 32947825 2.020000e-82 316
6 TraesCS5B01G174900 chr5A 87.719 171 20 1 1 170 375280683 375280853 7.620000e-47 198
7 TraesCS5B01G174900 chr5D 94.981 2650 103 14 846 3475 283004899 283007538 0.000000e+00 4130
8 TraesCS5B01G174900 chr3D 89.474 399 28 2 167 552 125679264 125678867 3.120000e-135 492
9 TraesCS5B01G174900 chr3D 88.318 214 23 1 632 843 103627973 103628186 4.460000e-64 255
10 TraesCS5B01G174900 chr1A 89.474 399 28 2 164 549 518506063 518506460 3.120000e-135 492
11 TraesCS5B01G174900 chr1A 84.358 358 25 3 167 510 574817346 574817006 4.330000e-84 322
12 TraesCS5B01G174900 chr3A 84.615 338 36 4 205 528 335998569 335998234 4.330000e-84 322
13 TraesCS5B01G174900 chr1D 86.054 294 26 4 242 522 2454960 2455251 5.640000e-78 302
14 TraesCS5B01G174900 chr3B 88.987 227 19 4 329 549 821577920 821578146 3.420000e-70 276
15 TraesCS5B01G174900 chr3B 87.330 221 25 2 629 846 369286345 369286125 2.070000e-62 250
16 TraesCS5B01G174900 chr4D 87.500 232 22 5 630 854 12036308 12036539 9.580000e-66 261
17 TraesCS5B01G174900 chr4D 88.073 218 19 4 634 846 341032778 341032563 5.760000e-63 252
18 TraesCS5B01G174900 chr2B 89.151 212 19 3 635 842 39465610 39465821 9.580000e-66 261
19 TraesCS5B01G174900 chr1B 87.727 220 22 3 635 850 665021591 665021373 5.760000e-63 252
20 TraesCS5B01G174900 chr6B 86.522 230 27 3 630 856 626211920 626211692 2.070000e-62 250
21 TraesCS5B01G174900 chr2D 87.727 220 20 4 635 851 431968497 431968282 2.070000e-62 250
22 TraesCS5B01G174900 chr7D 86.937 222 26 2 634 853 615443399 615443619 2.680000e-61 246


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G174900 chr5B 321208259 321211737 3478 False 6425 6425 100.0000 1 3479 1 chr5B.!!$F3 3478
1 TraesCS5B01G174900 chr5A 375280683 375285418 4735 False 2172 4146 91.3745 1 3479 2 chr5A.!!$F1 3478
2 TraesCS5B01G174900 chr5D 283004899 283007538 2639 False 4130 4130 94.9810 846 3475 1 chr5D.!!$F1 2629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
426 1705 0.036388 TTTAGCTAGCAAGGCGCAGT 60.036 50.0 18.83 0.0 46.13 4.40 F
681 2192 0.037590 AGTTAAGCATGGCAACCCGA 59.962 50.0 0.00 0.0 0.00 5.14 F
1798 3309 0.396435 TGGTTTCTCTGTCATGGCGT 59.604 50.0 0.00 0.0 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2047 3558 0.036164 TCATCAACCACCCGGACTTG 59.964 55.000 0.73 0.0 35.59 3.16 R
2250 3761 1.190833 CCTCAGTCAGCCTGTCCACT 61.191 60.000 0.00 0.0 42.19 4.00 R
3047 4561 3.719268 ACCACTCCTTATGCATCAACA 57.281 42.857 0.19 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.984230 ATCATTGGTCAGTGGACGGT 59.016 50.000 0.00 0.00 45.28 4.83
44 45 0.534877 GGGGTTTGGCCAAAAAGCTG 60.535 55.000 31.92 0.00 37.61 4.24
69 71 2.045536 CTGGAAGCAGTGGGGCTC 60.046 66.667 0.00 0.00 45.07 4.70
82 84 3.832490 AGTGGGGCTCAACCTTATTTTTC 59.168 43.478 0.00 0.00 39.10 2.29
92 94 7.490402 GCTCAACCTTATTTTTCATGAGAATGG 59.510 37.037 13.63 10.57 35.91 3.16
96 98 5.163519 CCTTATTTTTCATGAGAATGGCCGT 60.164 40.000 13.63 0.00 32.89 5.68
98 100 1.462616 TTTCATGAGAATGGCCGTGG 58.537 50.000 0.00 0.00 32.89 4.94
101 103 1.452651 ATGAGAATGGCCGTGGCTG 60.453 57.895 11.25 0.00 41.60 4.85
102 104 2.825836 GAGAATGGCCGTGGCTGG 60.826 66.667 11.25 0.00 41.60 4.85
105 107 4.431131 AATGGCCGTGGCTGGAGG 62.431 66.667 11.25 0.00 41.60 4.30
119 121 1.285078 CTGGAGGAAGGTTTTAGGGGG 59.715 57.143 0.00 0.00 0.00 5.40
124 126 3.830755 GAGGAAGGTTTTAGGGGGAAAAC 59.169 47.826 3.68 3.68 44.88 2.43
170 172 9.890629 ACTTTATAAGATTGTAAGTGATCTGCA 57.109 29.630 0.00 0.00 33.12 4.41
174 176 6.446781 AAGATTGTAAGTGATCTGCAATGG 57.553 37.500 2.24 0.00 33.55 3.16
176 178 3.719268 TGTAAGTGATCTGCAATGGGT 57.281 42.857 0.00 0.00 0.00 4.51
177 179 4.835284 TGTAAGTGATCTGCAATGGGTA 57.165 40.909 0.00 0.00 0.00 3.69
180 182 4.574674 AAGTGATCTGCAATGGGTAGAA 57.425 40.909 0.00 0.00 41.77 2.10
182 184 3.776969 AGTGATCTGCAATGGGTAGAAGA 59.223 43.478 0.00 0.00 41.77 2.87
186 835 0.739462 TGCAATGGGTAGAAGACGCG 60.739 55.000 3.53 3.53 43.88 6.01
188 837 1.153429 AATGGGTAGAAGACGCGGC 60.153 57.895 12.47 7.86 43.88 6.53
189 838 1.614241 AATGGGTAGAAGACGCGGCT 61.614 55.000 9.84 9.84 43.88 5.52
190 839 0.754217 ATGGGTAGAAGACGCGGCTA 60.754 55.000 18.71 5.44 43.88 3.93
191 840 1.065436 GGGTAGAAGACGCGGCTAC 59.935 63.158 18.71 17.48 35.05 3.58
201 850 3.827898 GCGGCTACTGCGGAGACT 61.828 66.667 12.26 0.00 41.29 3.24
204 853 2.113433 GGCTACTGCGGAGACTCGA 61.113 63.158 12.26 0.00 40.82 4.04
206 855 1.353804 CTACTGCGGAGACTCGAGC 59.646 63.158 12.26 12.84 0.00 5.03
207 856 1.078356 TACTGCGGAGACTCGAGCT 60.078 57.895 12.26 10.81 0.00 4.09
211 860 1.213013 GCGGAGACTCGAGCTTTGA 59.787 57.895 13.61 0.00 0.00 2.69
217 866 3.186119 GAGACTCGAGCTTTGAAGGATG 58.814 50.000 13.61 0.00 0.00 3.51
218 867 2.093764 AGACTCGAGCTTTGAAGGATGG 60.094 50.000 13.61 0.00 0.00 3.51
219 868 1.012841 CTCGAGCTTTGAAGGATGGC 58.987 55.000 0.00 0.00 0.00 4.40
222 871 1.101331 GAGCTTTGAAGGATGGCCTG 58.899 55.000 3.32 0.00 46.28 4.85
223 872 0.700564 AGCTTTGAAGGATGGCCTGA 59.299 50.000 3.32 0.00 46.28 3.86
224 873 1.287146 AGCTTTGAAGGATGGCCTGAT 59.713 47.619 3.32 0.00 46.28 2.90
225 874 2.105766 GCTTTGAAGGATGGCCTGATT 58.894 47.619 3.32 0.00 46.28 2.57
227 876 3.055602 GCTTTGAAGGATGGCCTGATTTT 60.056 43.478 3.32 0.00 46.28 1.82
229 878 2.459644 TGAAGGATGGCCTGATTTTGG 58.540 47.619 3.32 0.00 46.28 3.28
230 879 1.137675 GAAGGATGGCCTGATTTTGGC 59.862 52.381 3.32 0.00 46.28 4.52
235 884 2.650196 GCCTGATTTTGGCGTGCA 59.350 55.556 0.00 0.00 41.03 4.57
236 885 1.734117 GCCTGATTTTGGCGTGCAC 60.734 57.895 6.82 6.82 41.03 4.57
237 886 1.080569 CCTGATTTTGGCGTGCACC 60.081 57.895 12.15 3.87 0.00 5.01
238 887 1.659233 CTGATTTTGGCGTGCACCA 59.341 52.632 12.15 0.59 38.16 4.17
239 888 0.244450 CTGATTTTGGCGTGCACCAT 59.756 50.000 12.15 0.00 40.13 3.55
240 889 0.678395 TGATTTTGGCGTGCACCATT 59.322 45.000 12.15 0.00 40.13 3.16
241 890 1.070038 GATTTTGGCGTGCACCATTG 58.930 50.000 12.15 0.00 40.13 2.82
242 891 0.320596 ATTTTGGCGTGCACCATTGG 60.321 50.000 12.15 0.00 40.13 3.16
244 893 4.972733 TGGCGTGCACCATTGGCT 62.973 61.111 12.15 0.00 33.75 4.75
245 894 4.424566 GGCGTGCACCATTGGCTG 62.425 66.667 12.15 1.89 0.00 4.85
247 896 4.424566 CGTGCACCATTGGCTGCC 62.425 66.667 12.87 12.87 31.92 4.85
248 897 3.304721 GTGCACCATTGGCTGCCA 61.305 61.111 19.30 19.30 31.92 4.92
249 898 2.284039 TGCACCATTGGCTGCCAT 60.284 55.556 24.03 9.96 31.53 4.40
250 899 1.000107 TGCACCATTGGCTGCCATA 60.000 52.632 24.03 13.74 31.53 2.74
253 902 0.101040 CACCATTGGCTGCCATAACG 59.899 55.000 24.03 12.58 31.53 3.18
254 903 0.323360 ACCATTGGCTGCCATAACGT 60.323 50.000 24.03 13.23 31.53 3.99
256 905 1.093972 CATTGGCTGCCATAACGTGA 58.906 50.000 24.03 5.72 31.53 4.35
257 906 1.677576 CATTGGCTGCCATAACGTGAT 59.322 47.619 24.03 8.15 31.53 3.06
258 907 1.832883 TTGGCTGCCATAACGTGATT 58.167 45.000 24.03 0.00 31.53 2.57
259 908 1.832883 TGGCTGCCATAACGTGATTT 58.167 45.000 19.30 0.00 0.00 2.17
260 909 1.742831 TGGCTGCCATAACGTGATTTC 59.257 47.619 19.30 0.00 0.00 2.17
261 910 2.017049 GGCTGCCATAACGTGATTTCT 58.983 47.619 15.17 0.00 0.00 2.52
262 911 2.423538 GGCTGCCATAACGTGATTTCTT 59.576 45.455 15.17 0.00 0.00 2.52
263 912 3.429085 GCTGCCATAACGTGATTTCTTG 58.571 45.455 0.00 0.00 0.00 3.02
264 913 3.126858 GCTGCCATAACGTGATTTCTTGA 59.873 43.478 0.00 0.00 0.00 3.02
266 915 3.689161 TGCCATAACGTGATTTCTTGAGG 59.311 43.478 0.00 0.00 0.00 3.86
267 916 3.487544 GCCATAACGTGATTTCTTGAGGC 60.488 47.826 0.00 0.00 0.00 4.70
270 919 2.839486 ACGTGATTTCTTGAGGCTGA 57.161 45.000 0.00 0.00 0.00 4.26
271 920 3.340814 ACGTGATTTCTTGAGGCTGAT 57.659 42.857 0.00 0.00 0.00 2.90
272 921 3.679389 ACGTGATTTCTTGAGGCTGATT 58.321 40.909 0.00 0.00 0.00 2.57
273 922 3.438087 ACGTGATTTCTTGAGGCTGATTG 59.562 43.478 0.00 0.00 0.00 2.67
274 923 3.438087 CGTGATTTCTTGAGGCTGATTGT 59.562 43.478 0.00 0.00 0.00 2.71
282 1561 2.481441 TGAGGCTGATTGTATGGAGGT 58.519 47.619 0.00 0.00 0.00 3.85
288 1567 3.243873 GCTGATTGTATGGAGGTGATCGA 60.244 47.826 0.00 0.00 0.00 3.59
291 1570 1.758936 TGTATGGAGGTGATCGACGT 58.241 50.000 0.00 0.00 0.00 4.34
292 1571 2.921821 TGTATGGAGGTGATCGACGTA 58.078 47.619 0.00 0.00 0.00 3.57
293 1572 3.281158 TGTATGGAGGTGATCGACGTAA 58.719 45.455 0.00 0.00 0.00 3.18
294 1573 3.887110 TGTATGGAGGTGATCGACGTAAT 59.113 43.478 0.00 0.00 0.00 1.89
295 1574 2.863401 TGGAGGTGATCGACGTAATG 57.137 50.000 0.00 0.00 0.00 1.90
296 1575 1.202371 TGGAGGTGATCGACGTAATGC 60.202 52.381 0.00 0.00 0.00 3.56
297 1576 1.067212 GGAGGTGATCGACGTAATGCT 59.933 52.381 0.00 0.00 0.00 3.79
298 1577 2.386249 GAGGTGATCGACGTAATGCTC 58.614 52.381 0.00 0.00 0.00 4.26
299 1578 1.121240 GGTGATCGACGTAATGCTCG 58.879 55.000 0.00 0.00 0.00 5.03
300 1579 0.498927 GTGATCGACGTAATGCTCGC 59.501 55.000 0.00 0.00 0.00 5.03
302 1581 1.600485 TGATCGACGTAATGCTCGCTA 59.400 47.619 0.00 0.00 0.00 4.26
305 1584 0.306840 CGACGTAATGCTCGCTAGGA 59.693 55.000 0.00 0.00 0.00 2.94
306 1585 1.756367 GACGTAATGCTCGCTAGGAC 58.244 55.000 0.00 0.00 0.00 3.85
307 1586 1.065102 GACGTAATGCTCGCTAGGACA 59.935 52.381 0.00 0.00 0.00 4.02
309 1588 1.600663 CGTAATGCTCGCTAGGACAGG 60.601 57.143 0.00 0.00 0.00 4.00
310 1589 0.389391 TAATGCTCGCTAGGACAGGC 59.611 55.000 0.00 0.00 0.00 4.85
311 1590 1.617018 AATGCTCGCTAGGACAGGCA 61.617 55.000 0.00 0.00 0.00 4.75
315 1594 1.934220 CTCGCTAGGACAGGCAACGA 61.934 60.000 0.00 0.00 46.39 3.85
316 1595 1.805945 CGCTAGGACAGGCAACGAC 60.806 63.158 0.00 0.00 46.39 4.34
317 1596 1.448013 GCTAGGACAGGCAACGACC 60.448 63.158 0.00 0.00 46.39 4.79
319 1598 0.537188 CTAGGACAGGCAACGACCAT 59.463 55.000 0.00 0.00 46.39 3.55
320 1599 0.535335 TAGGACAGGCAACGACCATC 59.465 55.000 0.00 0.00 46.39 3.51
321 1600 1.194781 AGGACAGGCAACGACCATCT 61.195 55.000 0.00 0.00 46.39 2.90
322 1601 0.535335 GGACAGGCAACGACCATCTA 59.465 55.000 0.00 0.00 46.39 1.98
323 1602 1.139058 GGACAGGCAACGACCATCTAT 59.861 52.381 0.00 0.00 46.39 1.98
324 1603 2.205074 GACAGGCAACGACCATCTATG 58.795 52.381 0.00 0.00 46.39 2.23
325 1604 1.831106 ACAGGCAACGACCATCTATGA 59.169 47.619 0.00 0.00 46.39 2.15
326 1605 2.236146 ACAGGCAACGACCATCTATGAA 59.764 45.455 0.00 0.00 46.39 2.57
327 1606 2.868583 CAGGCAACGACCATCTATGAAG 59.131 50.000 0.00 0.00 46.39 3.02
328 1607 2.766263 AGGCAACGACCATCTATGAAGA 59.234 45.455 0.00 0.00 46.39 2.87
329 1608 3.197766 AGGCAACGACCATCTATGAAGAA 59.802 43.478 0.00 0.00 46.39 2.52
330 1609 4.130118 GGCAACGACCATCTATGAAGAAT 58.870 43.478 0.00 0.00 34.73 2.40
331 1610 4.024556 GGCAACGACCATCTATGAAGAATG 60.025 45.833 0.00 0.00 34.73 2.67
332 1611 4.572389 GCAACGACCATCTATGAAGAATGT 59.428 41.667 0.00 0.00 34.73 2.71
333 1612 5.065218 GCAACGACCATCTATGAAGAATGTT 59.935 40.000 0.00 0.00 34.73 2.71
334 1613 6.709643 CAACGACCATCTATGAAGAATGTTC 58.290 40.000 0.00 0.00 34.73 3.18
335 1614 6.227298 ACGACCATCTATGAAGAATGTTCT 57.773 37.500 0.00 0.00 39.74 3.01
337 1616 7.106239 ACGACCATCTATGAAGAATGTTCTTT 58.894 34.615 9.20 0.00 46.84 2.52
338 1617 7.278868 ACGACCATCTATGAAGAATGTTCTTTC 59.721 37.037 9.20 4.38 46.84 2.62
339 1618 7.254590 CGACCATCTATGAAGAATGTTCTTTCC 60.255 40.741 9.20 0.00 46.84 3.13
340 1619 7.637511 ACCATCTATGAAGAATGTTCTTTCCT 58.362 34.615 9.20 1.45 46.84 3.36
341 1620 8.112183 ACCATCTATGAAGAATGTTCTTTCCTT 58.888 33.333 9.20 0.33 46.84 3.36
342 1621 9.618890 CCATCTATGAAGAATGTTCTTTCCTTA 57.381 33.333 9.20 1.31 46.84 2.69
345 1624 9.877178 TCTATGAAGAATGTTCTTTCCTTAGTC 57.123 33.333 9.20 0.00 46.84 2.59
346 1625 7.602517 ATGAAGAATGTTCTTTCCTTAGTCG 57.397 36.000 9.20 0.00 46.84 4.18
347 1626 6.755206 TGAAGAATGTTCTTTCCTTAGTCGA 58.245 36.000 9.20 0.00 46.84 4.20
348 1627 7.214381 TGAAGAATGTTCTTTCCTTAGTCGAA 58.786 34.615 9.20 0.00 46.84 3.71
349 1628 7.713507 TGAAGAATGTTCTTTCCTTAGTCGAAA 59.286 33.333 9.20 0.00 46.84 3.46
350 1629 8.622948 AAGAATGTTCTTTCCTTAGTCGAAAT 57.377 30.769 2.25 0.00 44.70 2.17
351 1630 8.622948 AGAATGTTCTTTCCTTAGTCGAAATT 57.377 30.769 0.00 0.00 32.55 1.82
352 1631 8.507249 AGAATGTTCTTTCCTTAGTCGAAATTG 58.493 33.333 0.00 0.00 32.55 2.32
353 1632 7.745620 ATGTTCTTTCCTTAGTCGAAATTGT 57.254 32.000 0.00 0.00 0.00 2.71
354 1633 7.562454 TGTTCTTTCCTTAGTCGAAATTGTT 57.438 32.000 0.00 0.00 0.00 2.83
355 1634 7.636326 TGTTCTTTCCTTAGTCGAAATTGTTC 58.364 34.615 0.00 0.00 0.00 3.18
356 1635 7.497909 TGTTCTTTCCTTAGTCGAAATTGTTCT 59.502 33.333 0.00 0.00 0.00 3.01
357 1636 8.343366 GTTCTTTCCTTAGTCGAAATTGTTCTT 58.657 33.333 0.00 0.00 0.00 2.52
358 1637 8.084590 TCTTTCCTTAGTCGAAATTGTTCTTC 57.915 34.615 0.00 0.00 0.00 2.87
359 1638 7.931948 TCTTTCCTTAGTCGAAATTGTTCTTCT 59.068 33.333 0.00 0.00 0.00 2.85
360 1639 9.204570 CTTTCCTTAGTCGAAATTGTTCTTCTA 57.795 33.333 0.00 0.00 0.00 2.10
361 1640 9.720769 TTTCCTTAGTCGAAATTGTTCTTCTAT 57.279 29.630 0.00 0.00 0.00 1.98
362 1641 9.720769 TTCCTTAGTCGAAATTGTTCTTCTATT 57.279 29.630 0.00 0.00 0.00 1.73
388 1667 7.051000 ACTTTTAATCATTGTCCTAGAGAGGC 58.949 38.462 0.00 0.00 43.40 4.70
389 1668 5.552870 TTAATCATTGTCCTAGAGAGGCC 57.447 43.478 0.00 0.00 43.40 5.19
390 1669 2.550277 TCATTGTCCTAGAGAGGCCA 57.450 50.000 5.01 0.00 43.40 5.36
391 1670 2.832838 TCATTGTCCTAGAGAGGCCAA 58.167 47.619 5.01 0.00 44.56 4.52
395 1674 4.963318 TTGTCCTAGAGAGGCCAATATG 57.037 45.455 5.01 0.00 43.40 1.78
396 1675 3.242867 TGTCCTAGAGAGGCCAATATGG 58.757 50.000 5.01 0.00 43.40 2.74
412 1691 2.479198 GGCGACAGGCGTTTTAGC 59.521 61.111 0.00 0.00 44.92 3.09
413 1692 2.033194 GGCGACAGGCGTTTTAGCT 61.033 57.895 0.00 0.00 44.92 3.32
414 1693 0.738412 GGCGACAGGCGTTTTAGCTA 60.738 55.000 0.00 0.00 44.92 3.32
415 1694 0.645868 GCGACAGGCGTTTTAGCTAG 59.354 55.000 0.00 0.00 43.41 3.42
416 1695 0.645868 CGACAGGCGTTTTAGCTAGC 59.354 55.000 6.62 6.62 37.29 3.42
417 1696 1.722011 GACAGGCGTTTTAGCTAGCA 58.278 50.000 18.83 0.00 37.29 3.49
418 1697 2.073816 GACAGGCGTTTTAGCTAGCAA 58.926 47.619 18.83 6.50 37.29 3.91
419 1698 2.076863 ACAGGCGTTTTAGCTAGCAAG 58.923 47.619 18.83 0.00 37.29 4.01
422 1701 0.247695 GCGTTTTAGCTAGCAAGGCG 60.248 55.000 18.83 14.76 34.52 5.52
423 1702 0.247695 CGTTTTAGCTAGCAAGGCGC 60.248 55.000 18.83 0.00 42.91 6.53
424 1703 0.802494 GTTTTAGCTAGCAAGGCGCA 59.198 50.000 18.83 0.00 46.13 6.09
426 1705 0.036388 TTTAGCTAGCAAGGCGCAGT 60.036 50.000 18.83 0.00 46.13 4.40
427 1706 0.740868 TTAGCTAGCAAGGCGCAGTG 60.741 55.000 18.83 7.56 46.13 3.66
428 1707 1.888436 TAGCTAGCAAGGCGCAGTGT 61.888 55.000 18.83 0.08 46.13 3.55
429 1708 3.031964 GCTAGCAAGGCGCAGTGTG 62.032 63.158 10.83 0.00 46.13 3.82
430 1709 1.374631 CTAGCAAGGCGCAGTGTGA 60.375 57.895 10.83 0.00 46.13 3.58
431 1710 0.742281 CTAGCAAGGCGCAGTGTGAT 60.742 55.000 10.83 1.94 46.13 3.06
432 1711 0.740868 TAGCAAGGCGCAGTGTGATC 60.741 55.000 10.83 0.00 46.13 2.92
434 1713 1.737735 CAAGGCGCAGTGTGATCGA 60.738 57.895 10.83 0.00 0.00 3.59
435 1714 1.086067 CAAGGCGCAGTGTGATCGAT 61.086 55.000 10.83 0.00 0.00 3.59
436 1715 0.807667 AAGGCGCAGTGTGATCGATC 60.808 55.000 18.72 18.72 0.00 3.69
437 1716 2.240500 GGCGCAGTGTGATCGATCC 61.241 63.158 22.31 13.85 0.00 3.36
439 1718 0.877649 GCGCAGTGTGATCGATCCAT 60.878 55.000 22.31 3.13 0.00 3.41
440 1719 1.575244 CGCAGTGTGATCGATCCATT 58.425 50.000 22.31 13.21 0.00 3.16
441 1720 1.259770 CGCAGTGTGATCGATCCATTG 59.740 52.381 22.31 22.77 0.00 2.82
443 1722 2.679837 GCAGTGTGATCGATCCATTGTT 59.320 45.455 25.45 8.80 0.00 2.83
444 1723 3.127548 GCAGTGTGATCGATCCATTGTTT 59.872 43.478 25.45 7.64 0.00 2.83
445 1724 4.655027 CAGTGTGATCGATCCATTGTTTG 58.345 43.478 22.31 8.13 0.00 2.93
449 1728 3.087781 TGATCGATCCATTGTTTGGCAA 58.912 40.909 22.31 0.00 46.01 4.52
451 1730 3.781079 TCGATCCATTGTTTGGCAATC 57.219 42.857 0.00 0.05 45.33 2.67
452 1731 2.097304 TCGATCCATTGTTTGGCAATCG 59.903 45.455 0.00 4.95 46.24 3.34
453 1732 2.795681 CGATCCATTGTTTGGCAATCGG 60.796 50.000 0.00 0.00 45.33 4.18
454 1733 1.916506 TCCATTGTTTGGCAATCGGA 58.083 45.000 0.00 0.00 45.33 4.55
463 1742 4.941609 GCAATCGGAGCCTTCAGA 57.058 55.556 0.00 0.00 32.06 3.27
465 1744 1.673168 GCAATCGGAGCCTTCAGATT 58.327 50.000 0.00 0.00 45.27 2.40
466 1745 2.019984 GCAATCGGAGCCTTCAGATTT 58.980 47.619 0.00 0.00 42.95 2.17
467 1746 2.424956 GCAATCGGAGCCTTCAGATTTT 59.575 45.455 0.00 0.00 42.95 1.82
468 1747 3.119352 GCAATCGGAGCCTTCAGATTTTT 60.119 43.478 0.00 0.00 42.95 1.94
488 1767 4.849111 TTTTGTCGATGTTTTGGCAAAC 57.151 36.364 13.10 8.70 39.88 2.93
489 1768 2.112475 TGTCGATGTTTTGGCAAACG 57.888 45.000 13.10 12.89 44.76 3.60
490 1769 1.671328 TGTCGATGTTTTGGCAAACGA 59.329 42.857 13.10 15.05 44.76 3.85
491 1770 2.292016 TGTCGATGTTTTGGCAAACGAT 59.708 40.909 21.10 12.89 44.76 3.73
492 1771 2.656422 GTCGATGTTTTGGCAAACGATG 59.344 45.455 21.10 8.72 44.76 3.84
507 1786 4.494350 AACGATGCATCCATATTTGAGC 57.506 40.909 20.87 0.00 0.00 4.26
508 1787 3.479489 ACGATGCATCCATATTTGAGCA 58.521 40.909 20.87 0.00 36.34 4.26
510 1789 4.082949 ACGATGCATCCATATTTGAGCATG 60.083 41.667 20.87 4.19 42.18 4.06
511 1790 4.155280 CGATGCATCCATATTTGAGCATGA 59.845 41.667 20.87 0.00 42.18 3.07
513 1792 5.855740 TGCATCCATATTTGAGCATGAAA 57.144 34.783 0.00 0.00 0.00 2.69
514 1793 6.413783 TGCATCCATATTTGAGCATGAAAT 57.586 33.333 0.00 0.00 35.63 2.17
515 1794 7.527568 TGCATCCATATTTGAGCATGAAATA 57.472 32.000 0.00 0.00 38.47 1.40
516 1795 8.129496 TGCATCCATATTTGAGCATGAAATAT 57.871 30.769 0.00 0.92 43.97 1.28
517 1796 9.245481 TGCATCCATATTTGAGCATGAAATATA 57.755 29.630 0.00 0.00 41.81 0.86
526 1805 7.624360 TTGAGCATGAAATATAAAACTCCGT 57.376 32.000 0.00 0.00 0.00 4.69
527 1806 7.015226 TGAGCATGAAATATAAAACTCCGTG 57.985 36.000 0.00 0.00 0.00 4.94
528 1807 6.821160 TGAGCATGAAATATAAAACTCCGTGA 59.179 34.615 0.00 0.00 0.00 4.35
529 1808 7.016361 AGCATGAAATATAAAACTCCGTGAC 57.984 36.000 0.00 0.00 0.00 3.67
530 1809 5.901884 GCATGAAATATAAAACTCCGTGACG 59.098 40.000 0.00 0.00 0.00 4.35
531 1810 6.237996 GCATGAAATATAAAACTCCGTGACGA 60.238 38.462 6.54 0.00 0.00 4.20
532 1811 6.636666 TGAAATATAAAACTCCGTGACGAC 57.363 37.500 6.54 0.00 0.00 4.34
533 1812 5.286797 TGAAATATAAAACTCCGTGACGACG 59.713 40.000 6.54 0.00 45.67 5.12
534 1813 2.712057 ATAAAACTCCGTGACGACGT 57.288 45.000 6.54 0.00 44.54 4.34
535 1814 3.829886 ATAAAACTCCGTGACGACGTA 57.170 42.857 6.54 0.00 44.54 3.57
536 1815 2.712057 AAAACTCCGTGACGACGTAT 57.288 45.000 6.54 0.00 44.54 3.06
537 1816 2.712057 AAACTCCGTGACGACGTATT 57.288 45.000 6.54 0.00 44.54 1.89
538 1817 3.829886 AAACTCCGTGACGACGTATTA 57.170 42.857 6.54 0.00 44.54 0.98
539 1818 2.813779 ACTCCGTGACGACGTATTAC 57.186 50.000 6.54 0.00 44.54 1.89
540 1819 1.398390 ACTCCGTGACGACGTATTACC 59.602 52.381 6.54 0.00 44.54 2.85
541 1820 1.398041 CTCCGTGACGACGTATTACCA 59.602 52.381 6.54 0.00 44.54 3.25
542 1821 2.016318 TCCGTGACGACGTATTACCAT 58.984 47.619 6.54 0.00 44.54 3.55
543 1822 3.202097 TCCGTGACGACGTATTACCATA 58.798 45.455 6.54 0.00 44.54 2.74
544 1823 3.625313 TCCGTGACGACGTATTACCATAA 59.375 43.478 6.54 0.00 44.54 1.90
545 1824 4.095632 TCCGTGACGACGTATTACCATAAA 59.904 41.667 6.54 0.00 44.54 1.40
546 1825 4.797868 CCGTGACGACGTATTACCATAAAA 59.202 41.667 6.54 0.00 44.54 1.52
547 1826 5.288232 CCGTGACGACGTATTACCATAAAAA 59.712 40.000 6.54 0.00 44.54 1.94
586 2088 6.651225 GCTAGATGACGCTTAATCCCTAAAAT 59.349 38.462 0.00 0.00 0.00 1.82
651 2162 5.806366 AAAAACGGTAATGATAACTCCCG 57.194 39.130 0.00 0.00 41.09 5.14
652 2163 4.741321 AAACGGTAATGATAACTCCCGA 57.259 40.909 2.57 0.00 38.75 5.14
653 2164 4.741321 AACGGTAATGATAACTCCCGAA 57.259 40.909 2.57 0.00 38.75 4.30
654 2165 4.950205 ACGGTAATGATAACTCCCGAAT 57.050 40.909 2.57 0.00 38.75 3.34
655 2166 4.628074 ACGGTAATGATAACTCCCGAATG 58.372 43.478 2.57 0.00 38.75 2.67
656 2167 4.100498 ACGGTAATGATAACTCCCGAATGT 59.900 41.667 2.57 0.00 38.75 2.71
657 2168 5.054477 CGGTAATGATAACTCCCGAATGTT 58.946 41.667 0.00 0.00 37.66 2.71
658 2169 5.176958 CGGTAATGATAACTCCCGAATGTTC 59.823 44.000 0.00 0.00 37.66 3.18
670 2181 2.343101 CGAATGTTCGGGAGTTAAGCA 58.657 47.619 7.24 0.00 46.30 3.91
671 2182 2.936498 CGAATGTTCGGGAGTTAAGCAT 59.064 45.455 7.24 0.00 46.30 3.79
672 2183 3.242413 CGAATGTTCGGGAGTTAAGCATG 60.242 47.826 7.24 0.00 46.30 4.06
673 2184 2.107950 TGTTCGGGAGTTAAGCATGG 57.892 50.000 0.00 0.00 0.00 3.66
674 2185 0.733150 GTTCGGGAGTTAAGCATGGC 59.267 55.000 0.00 0.00 0.00 4.40
675 2186 0.326595 TTCGGGAGTTAAGCATGGCA 59.673 50.000 0.00 0.00 0.00 4.92
676 2187 0.326595 TCGGGAGTTAAGCATGGCAA 59.673 50.000 0.00 0.00 0.00 4.52
677 2188 0.451783 CGGGAGTTAAGCATGGCAAC 59.548 55.000 0.00 0.00 0.00 4.17
678 2189 0.817654 GGGAGTTAAGCATGGCAACC 59.182 55.000 0.00 0.00 0.00 3.77
679 2190 0.817654 GGAGTTAAGCATGGCAACCC 59.182 55.000 0.00 0.00 0.00 4.11
680 2191 0.451783 GAGTTAAGCATGGCAACCCG 59.548 55.000 0.00 0.00 0.00 5.28
681 2192 0.037590 AGTTAAGCATGGCAACCCGA 59.962 50.000 0.00 0.00 0.00 5.14
682 2193 0.885196 GTTAAGCATGGCAACCCGAA 59.115 50.000 0.00 0.00 0.00 4.30
683 2194 0.885196 TTAAGCATGGCAACCCGAAC 59.115 50.000 0.00 0.00 0.00 3.95
684 2195 1.302383 TAAGCATGGCAACCCGAACG 61.302 55.000 0.00 0.00 0.00 3.95
685 2196 4.114997 GCATGGCAACCCGAACGG 62.115 66.667 6.25 6.25 37.81 4.44
697 2208 2.373540 CCGAACGGGTTTAGATGACA 57.626 50.000 5.25 0.00 0.00 3.58
698 2209 2.690786 CCGAACGGGTTTAGATGACAA 58.309 47.619 5.25 0.00 0.00 3.18
699 2210 3.068560 CCGAACGGGTTTAGATGACAAA 58.931 45.455 5.25 0.00 0.00 2.83
700 2211 3.687698 CCGAACGGGTTTAGATGACAAAT 59.312 43.478 5.25 0.00 0.00 2.32
701 2212 4.155280 CCGAACGGGTTTAGATGACAAATT 59.845 41.667 5.25 0.00 0.00 1.82
702 2213 5.335348 CCGAACGGGTTTAGATGACAAATTT 60.335 40.000 5.25 0.00 0.00 1.82
703 2214 6.128227 CCGAACGGGTTTAGATGACAAATTTA 60.128 38.462 5.25 0.00 0.00 1.40
704 2215 6.959311 CGAACGGGTTTAGATGACAAATTTAG 59.041 38.462 0.00 0.00 0.00 1.85
705 2216 7.360607 CGAACGGGTTTAGATGACAAATTTAGT 60.361 37.037 0.00 0.00 0.00 2.24
706 2217 7.754851 ACGGGTTTAGATGACAAATTTAGTT 57.245 32.000 0.00 0.00 0.00 2.24
707 2218 8.173542 ACGGGTTTAGATGACAAATTTAGTTT 57.826 30.769 0.00 0.00 0.00 2.66
720 2231 7.725610 CAAATTTAGTTTGCGTGAGATTAGG 57.274 36.000 0.00 0.00 40.62 2.69
721 2232 7.526608 CAAATTTAGTTTGCGTGAGATTAGGA 58.473 34.615 0.00 0.00 40.62 2.94
722 2233 7.681939 AATTTAGTTTGCGTGAGATTAGGAA 57.318 32.000 0.00 0.00 0.00 3.36
723 2234 7.681939 ATTTAGTTTGCGTGAGATTAGGAAA 57.318 32.000 0.00 0.00 0.00 3.13
724 2235 7.499321 TTTAGTTTGCGTGAGATTAGGAAAA 57.501 32.000 0.00 0.00 0.00 2.29
725 2236 7.681939 TTAGTTTGCGTGAGATTAGGAAAAT 57.318 32.000 0.00 0.00 0.00 1.82
726 2237 8.780846 TTAGTTTGCGTGAGATTAGGAAAATA 57.219 30.769 0.00 0.00 0.00 1.40
727 2238 7.865706 AGTTTGCGTGAGATTAGGAAAATAT 57.134 32.000 0.00 0.00 0.00 1.28
728 2239 7.697691 AGTTTGCGTGAGATTAGGAAAATATG 58.302 34.615 0.00 0.00 0.00 1.78
729 2240 6.618287 TTGCGTGAGATTAGGAAAATATGG 57.382 37.500 0.00 0.00 0.00 2.74
730 2241 5.680619 TGCGTGAGATTAGGAAAATATGGT 58.319 37.500 0.00 0.00 0.00 3.55
731 2242 6.822442 TGCGTGAGATTAGGAAAATATGGTA 58.178 36.000 0.00 0.00 0.00 3.25
732 2243 7.276658 TGCGTGAGATTAGGAAAATATGGTAA 58.723 34.615 0.00 0.00 0.00 2.85
733 2244 7.936847 TGCGTGAGATTAGGAAAATATGGTAAT 59.063 33.333 0.00 0.00 0.00 1.89
734 2245 8.784043 GCGTGAGATTAGGAAAATATGGTAATT 58.216 33.333 0.00 0.00 0.00 1.40
758 2269 8.839310 TTTTCTGACAAAAATGAAAAAGGACA 57.161 26.923 0.00 0.00 36.07 4.02
759 2270 8.839310 TTTCTGACAAAAATGAAAAAGGACAA 57.161 26.923 0.00 0.00 0.00 3.18
760 2271 8.839310 TTCTGACAAAAATGAAAAAGGACAAA 57.161 26.923 0.00 0.00 0.00 2.83
761 2272 8.477984 TCTGACAAAAATGAAAAAGGACAAAG 57.522 30.769 0.00 0.00 0.00 2.77
762 2273 8.093927 TCTGACAAAAATGAAAAAGGACAAAGT 58.906 29.630 0.00 0.00 0.00 2.66
763 2274 8.614469 TGACAAAAATGAAAAAGGACAAAGTT 57.386 26.923 0.00 0.00 0.00 2.66
764 2275 8.502387 TGACAAAAATGAAAAAGGACAAAGTTG 58.498 29.630 0.00 0.00 0.00 3.16
765 2276 7.304735 ACAAAAATGAAAAAGGACAAAGTTGC 58.695 30.769 0.00 0.00 0.00 4.17
766 2277 6.435430 AAAATGAAAAAGGACAAAGTTGCC 57.565 33.333 0.00 0.00 0.00 4.52
767 2278 4.751767 ATGAAAAAGGACAAAGTTGCCA 57.248 36.364 7.09 0.00 0.00 4.92
768 2279 4.751767 TGAAAAAGGACAAAGTTGCCAT 57.248 36.364 7.09 0.00 0.00 4.40
769 2280 4.692228 TGAAAAAGGACAAAGTTGCCATC 58.308 39.130 7.09 2.38 0.00 3.51
770 2281 4.405358 TGAAAAAGGACAAAGTTGCCATCT 59.595 37.500 7.09 0.00 0.00 2.90
771 2282 5.104982 TGAAAAAGGACAAAGTTGCCATCTT 60.105 36.000 7.09 0.00 0.00 2.40
772 2283 5.357742 AAAAGGACAAAGTTGCCATCTTT 57.642 34.783 0.00 0.00 35.82 2.52
773 2284 5.357742 AAAGGACAAAGTTGCCATCTTTT 57.642 34.783 0.00 0.00 33.58 2.27
774 2285 4.326504 AGGACAAAGTTGCCATCTTTTG 57.673 40.909 0.00 0.00 33.58 2.44
775 2286 3.706086 AGGACAAAGTTGCCATCTTTTGT 59.294 39.130 0.00 1.51 33.58 2.83
776 2287 4.051237 GGACAAAGTTGCCATCTTTTGTC 58.949 43.478 16.45 16.45 35.24 3.18
777 2288 4.441356 GGACAAAGTTGCCATCTTTTGTCA 60.441 41.667 22.61 0.00 36.25 3.58
778 2289 5.083533 ACAAAGTTGCCATCTTTTGTCAA 57.916 34.783 0.00 0.00 33.58 3.18
779 2290 4.869861 ACAAAGTTGCCATCTTTTGTCAAC 59.130 37.500 0.00 0.00 37.78 3.18
780 2291 4.734398 AAGTTGCCATCTTTTGTCAACA 57.266 36.364 2.86 0.00 39.39 3.33
781 2292 4.734398 AGTTGCCATCTTTTGTCAACAA 57.266 36.364 2.86 0.00 39.39 2.83
782 2293 4.685924 AGTTGCCATCTTTTGTCAACAAG 58.314 39.130 2.86 0.00 39.39 3.16
783 2294 4.160252 AGTTGCCATCTTTTGTCAACAAGT 59.840 37.500 2.86 0.00 39.39 3.16
784 2295 4.734398 TGCCATCTTTTGTCAACAAGTT 57.266 36.364 0.00 0.00 37.15 2.66
785 2296 4.431809 TGCCATCTTTTGTCAACAAGTTG 58.568 39.130 6.60 6.60 41.71 3.16
786 2297 3.803778 GCCATCTTTTGTCAACAAGTTGG 59.196 43.478 20.04 20.04 40.62 3.77
787 2298 3.803778 CCATCTTTTGTCAACAAGTTGGC 59.196 43.478 10.42 10.42 44.84 4.52
797 2308 6.452244 GTCAACAAGTTGGCATGTAAAATC 57.548 37.500 12.28 0.00 44.08 2.17
798 2309 5.982516 GTCAACAAGTTGGCATGTAAAATCA 59.017 36.000 12.28 0.00 44.08 2.57
799 2310 6.646240 GTCAACAAGTTGGCATGTAAAATCAT 59.354 34.615 12.28 0.00 44.08 2.45
800 2311 7.171337 GTCAACAAGTTGGCATGTAAAATCATT 59.829 33.333 12.28 0.00 44.08 2.57
801 2312 7.171167 TCAACAAGTTGGCATGTAAAATCATTG 59.829 33.333 12.54 0.00 40.78 2.82
802 2313 5.933463 ACAAGTTGGCATGTAAAATCATTGG 59.067 36.000 7.96 0.00 0.00 3.16
803 2314 5.088680 AGTTGGCATGTAAAATCATTGGG 57.911 39.130 0.00 0.00 0.00 4.12
804 2315 4.080975 AGTTGGCATGTAAAATCATTGGGG 60.081 41.667 0.00 0.00 0.00 4.96
805 2316 3.717576 TGGCATGTAAAATCATTGGGGA 58.282 40.909 0.00 0.00 0.00 4.81
806 2317 4.296912 TGGCATGTAAAATCATTGGGGAT 58.703 39.130 0.00 0.00 0.00 3.85
807 2318 4.101274 TGGCATGTAAAATCATTGGGGATG 59.899 41.667 0.00 0.00 37.08 3.51
816 2327 3.385314 TCATTGGGGATGAAATGCTCA 57.615 42.857 0.00 0.00 46.46 4.26
821 2332 4.741321 TGGGGATGAAATGCTCAAAATC 57.259 40.909 0.00 0.00 44.53 2.17
822 2333 3.451902 TGGGGATGAAATGCTCAAAATCC 59.548 43.478 0.00 0.00 44.53 3.01
823 2334 3.491447 GGGGATGAAATGCTCAAAATCCG 60.491 47.826 0.00 0.00 33.95 4.18
824 2335 3.381272 GGGATGAAATGCTCAAAATCCGA 59.619 43.478 0.00 0.00 37.67 4.55
825 2336 4.142182 GGGATGAAATGCTCAAAATCCGAA 60.142 41.667 0.00 0.00 37.67 4.30
826 2337 4.800471 GGATGAAATGCTCAAAATCCGAAC 59.200 41.667 0.00 0.00 37.67 3.95
827 2338 3.820689 TGAAATGCTCAAAATCCGAACG 58.179 40.909 0.00 0.00 0.00 3.95
828 2339 3.252215 TGAAATGCTCAAAATCCGAACGT 59.748 39.130 0.00 0.00 0.00 3.99
829 2340 3.915437 AATGCTCAAAATCCGAACGTT 57.085 38.095 0.00 0.00 0.00 3.99
830 2341 2.961522 TGCTCAAAATCCGAACGTTC 57.038 45.000 18.47 18.47 0.00 3.95
843 2354 2.691927 GAACGTTCGGGAGTTATTGGT 58.308 47.619 13.36 0.00 0.00 3.67
844 2355 2.845363 ACGTTCGGGAGTTATTGGTT 57.155 45.000 0.00 0.00 0.00 3.67
847 2358 3.499537 ACGTTCGGGAGTTATTGGTTTTC 59.500 43.478 0.00 0.00 0.00 2.29
1128 2639 2.435059 GTGCTCTTCGCCACCTCC 60.435 66.667 0.00 0.00 38.05 4.30
1155 2666 2.434884 CTGCCACGCCTCGTTCAT 60.435 61.111 0.00 0.00 38.32 2.57
1222 2733 3.524606 CCACGGCCGATACCTCGT 61.525 66.667 35.90 2.60 43.49 4.18
1356 2867 1.660575 CGTCGGTGCGAACTTCACT 60.661 57.895 0.00 0.00 37.72 3.41
1539 3050 2.125350 GAGTCTCTGCCTTGCCCG 60.125 66.667 0.00 0.00 0.00 6.13
1545 3056 4.101448 CTGCCTTGCCCGCCTACT 62.101 66.667 0.00 0.00 0.00 2.57
1693 3204 2.240162 ATTCGTGAAGAGCGGGGTCC 62.240 60.000 0.00 0.00 0.00 4.46
1737 3248 2.880879 CAGGCCGTCGATGTCACG 60.881 66.667 3.52 0.00 36.99 4.35
1798 3309 0.396435 TGGTTTCTCTGTCATGGCGT 59.604 50.000 0.00 0.00 0.00 5.68
1814 3325 2.495669 TGGCGTCTGATGATTCTACACA 59.504 45.455 0.00 0.00 0.00 3.72
1858 3369 4.867608 GCAAAGGTTTTGTGTTTCTTAGCA 59.132 37.500 3.77 0.00 0.00 3.49
1908 3419 1.736681 GATGTGCTTCTGACAGCCTTC 59.263 52.381 0.00 5.58 39.25 3.46
2082 3593 1.209019 GATGAGCATGTCCCACAGTCT 59.791 52.381 0.00 0.00 0.00 3.24
2250 3761 3.736094 AGAGAATGGATACCCACTGGAA 58.264 45.455 0.00 0.00 46.98 3.53
2414 3925 4.584743 GGAAGACATGGTTGAGAGGTTTTT 59.415 41.667 0.00 0.00 0.00 1.94
2451 3962 5.578005 CAAGGATTGTTGCTGATCAGATT 57.422 39.130 27.04 1.61 42.34 2.40
2483 3994 4.142138 GGTTGTCAGTACTCAGTAGATGGG 60.142 50.000 0.00 0.00 34.51 4.00
2534 4045 7.255836 CCGAGGAAAGTAGATATCATACACCAA 60.256 40.741 5.32 0.00 0.00 3.67
2665 4176 5.464389 GCCTTTATGCCATCATGATTTGAAC 59.536 40.000 5.16 0.00 38.03 3.18
2809 4320 7.817478 GGTATTTCCACCTTCCATTTTTGTTAG 59.183 37.037 0.00 0.00 35.55 2.34
2966 4477 2.175931 TCTTACCTGGGCCAACAAAAGA 59.824 45.455 8.04 11.51 0.00 2.52
2967 4478 2.990740 TACCTGGGCCAACAAAAGAT 57.009 45.000 8.04 0.00 0.00 2.40
2968 4479 1.632589 ACCTGGGCCAACAAAAGATC 58.367 50.000 8.04 0.00 0.00 2.75
2969 4480 1.147817 ACCTGGGCCAACAAAAGATCT 59.852 47.619 8.04 0.00 0.00 2.75
2970 4481 1.821136 CCTGGGCCAACAAAAGATCTC 59.179 52.381 8.04 0.00 0.00 2.75
2971 4482 2.517959 CTGGGCCAACAAAAGATCTCA 58.482 47.619 8.04 0.00 0.00 3.27
2972 4483 2.892852 CTGGGCCAACAAAAGATCTCAA 59.107 45.455 8.04 0.00 0.00 3.02
2974 4485 4.671831 TGGGCCAACAAAAGATCTCAATA 58.328 39.130 2.13 0.00 0.00 1.90
2975 4486 4.462483 TGGGCCAACAAAAGATCTCAATAC 59.538 41.667 2.13 0.00 0.00 1.89
2979 4493 5.264395 CCAACAAAAGATCTCAATACCCCT 58.736 41.667 0.00 0.00 0.00 4.79
2983 4497 6.552008 ACAAAAGATCTCAATACCCCTTTCA 58.448 36.000 0.00 0.00 0.00 2.69
3006 4520 3.947910 AAAATGGAGCAGTGACAATGG 57.052 42.857 4.88 0.00 0.00 3.16
3029 4543 6.716173 TGGTTCATCAGAAATCATCAACAGAA 59.284 34.615 0.00 0.00 35.08 3.02
3032 4546 8.509690 GTTCATCAGAAATCATCAACAGAAGAA 58.490 33.333 0.00 0.00 35.08 2.52
3175 4714 8.966868 TCAACCTTGTTTCTTTCTTTCTATGTT 58.033 29.630 0.00 0.00 0.00 2.71
3176 4715 9.023967 CAACCTTGTTTCTTTCTTTCTATGTTG 57.976 33.333 0.00 0.00 0.00 3.33
3177 4716 8.293699 ACCTTGTTTCTTTCTTTCTATGTTGT 57.706 30.769 0.00 0.00 0.00 3.32
3178 4717 9.403583 ACCTTGTTTCTTTCTTTCTATGTTGTA 57.596 29.630 0.00 0.00 0.00 2.41
3179 4718 9.884465 CCTTGTTTCTTTCTTTCTATGTTGTAG 57.116 33.333 0.00 0.00 0.00 2.74
3180 4719 9.387123 CTTGTTTCTTTCTTTCTATGTTGTAGC 57.613 33.333 0.00 0.00 0.00 3.58
3181 4720 8.445275 TGTTTCTTTCTTTCTATGTTGTAGCA 57.555 30.769 0.00 0.00 0.00 3.49
3229 4768 4.357018 TGCGTGACAAATTGTGTTGTTA 57.643 36.364 2.20 0.00 41.78 2.41
3243 4782 9.816354 AATTGTGTTGTTAAAACTTGAGCTTAT 57.184 25.926 0.00 0.00 0.00 1.73
3339 4879 4.261801 TCAAGTTCAGTTATAGCCTTGCC 58.738 43.478 0.00 0.00 31.64 4.52
3347 4887 4.096382 CAGTTATAGCCTTGCCGTTTGAAT 59.904 41.667 0.00 0.00 0.00 2.57
3348 4888 4.335594 AGTTATAGCCTTGCCGTTTGAATC 59.664 41.667 0.00 0.00 0.00 2.52
3410 4950 0.250901 AGTCTGAATTGCCCGCAACT 60.251 50.000 3.85 0.00 38.88 3.16
3411 4951 0.109597 GTCTGAATTGCCCGCAACTG 60.110 55.000 3.85 0.00 38.88 3.16
3450 4990 9.520515 ACTGTGATACAAAAAGGAATAGTCAAT 57.479 29.630 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.964978 CCCGCCTCAGCTTTTTGG 59.035 61.111 0.00 0.00 36.60 3.28
35 36 2.259511 GCCCGCCTCAGCTTTTTG 59.740 61.111 0.00 0.00 36.60 2.44
62 64 3.850752 TGAAAAATAAGGTTGAGCCCCA 58.149 40.909 0.00 0.00 38.26 4.96
64 66 5.418840 TCTCATGAAAAATAAGGTTGAGCCC 59.581 40.000 0.00 0.00 38.26 5.19
65 67 6.515272 TCTCATGAAAAATAAGGTTGAGCC 57.485 37.500 0.00 0.00 37.58 4.70
66 68 7.490402 CCATTCTCATGAAAAATAAGGTTGAGC 59.510 37.037 0.00 0.00 35.63 4.26
69 71 6.536224 GGCCATTCTCATGAAAAATAAGGTTG 59.464 38.462 0.00 0.00 35.63 3.77
82 84 1.452651 AGCCACGGCCATTCTCATG 60.453 57.895 2.24 0.00 43.17 3.07
92 94 4.785453 CCTTCCTCCAGCCACGGC 62.785 72.222 0.00 0.00 42.33 5.68
96 98 1.354368 CCTAAAACCTTCCTCCAGCCA 59.646 52.381 0.00 0.00 0.00 4.75
98 100 1.341089 CCCCTAAAACCTTCCTCCAGC 60.341 57.143 0.00 0.00 0.00 4.85
101 103 1.677490 TCCCCCTAAAACCTTCCTCC 58.323 55.000 0.00 0.00 0.00 4.30
102 104 3.820195 TTTCCCCCTAAAACCTTCCTC 57.180 47.619 0.00 0.00 0.00 3.71
105 107 7.490657 AATATGTTTTCCCCCTAAAACCTTC 57.509 36.000 9.10 0.00 44.89 3.46
157 159 5.023533 TCTACCCATTGCAGATCACTTAC 57.976 43.478 0.00 0.00 0.00 2.34
162 164 3.430790 CGTCTTCTACCCATTGCAGATCA 60.431 47.826 0.00 0.00 0.00 2.92
170 172 1.153429 GCCGCGTCTTCTACCCATT 60.153 57.895 4.92 0.00 0.00 3.16
172 174 1.378911 TAGCCGCGTCTTCTACCCA 60.379 57.895 4.92 0.00 0.00 4.51
173 175 1.065436 GTAGCCGCGTCTTCTACCC 59.935 63.158 4.92 0.00 0.00 3.69
174 176 0.248539 CAGTAGCCGCGTCTTCTACC 60.249 60.000 4.92 0.00 34.70 3.18
176 178 1.432251 GCAGTAGCCGCGTCTTCTA 59.568 57.895 4.92 0.00 33.58 2.10
177 179 2.182030 GCAGTAGCCGCGTCTTCT 59.818 61.111 4.92 0.00 33.58 2.85
186 835 2.054140 CTCGAGTCTCCGCAGTAGCC 62.054 65.000 3.62 0.00 37.52 3.93
188 837 1.092921 AGCTCGAGTCTCCGCAGTAG 61.093 60.000 15.13 0.00 0.00 2.57
189 838 0.677098 AAGCTCGAGTCTCCGCAGTA 60.677 55.000 15.13 0.00 0.00 2.74
190 839 1.528292 AAAGCTCGAGTCTCCGCAGT 61.528 55.000 15.13 0.00 0.00 4.40
191 840 1.075425 CAAAGCTCGAGTCTCCGCAG 61.075 60.000 15.13 0.00 0.00 5.18
197 846 2.093764 CCATCCTTCAAAGCTCGAGTCT 60.094 50.000 15.13 8.90 0.00 3.24
198 847 2.275318 CCATCCTTCAAAGCTCGAGTC 58.725 52.381 15.13 6.52 0.00 3.36
199 848 1.677217 GCCATCCTTCAAAGCTCGAGT 60.677 52.381 15.13 0.00 0.00 4.18
201 850 0.392998 GGCCATCCTTCAAAGCTCGA 60.393 55.000 0.00 0.00 0.00 4.04
204 853 0.700564 TCAGGCCATCCTTCAAAGCT 59.299 50.000 5.01 0.00 41.93 3.74
206 855 4.501071 CAAAATCAGGCCATCCTTCAAAG 58.499 43.478 5.01 0.00 41.93 2.77
207 856 3.261390 CCAAAATCAGGCCATCCTTCAAA 59.739 43.478 5.01 0.00 41.93 2.69
211 860 1.197812 GCCAAAATCAGGCCATCCTT 58.802 50.000 5.01 0.00 46.50 3.36
219 868 1.080569 GGTGCACGCCAAAATCAGG 60.081 57.895 11.45 0.00 0.00 3.86
221 870 0.678395 AATGGTGCACGCCAAAATCA 59.322 45.000 11.45 0.21 42.48 2.57
222 871 1.070038 CAATGGTGCACGCCAAAATC 58.930 50.000 11.45 0.00 42.48 2.17
223 872 0.320596 CCAATGGTGCACGCCAAAAT 60.321 50.000 11.45 0.00 42.48 1.82
224 873 1.068753 CCAATGGTGCACGCCAAAA 59.931 52.632 11.45 0.00 42.48 2.44
225 874 2.733301 CCAATGGTGCACGCCAAA 59.267 55.556 11.45 0.00 42.48 3.28
227 876 4.972733 AGCCAATGGTGCACGCCA 62.973 61.111 11.45 5.22 43.48 5.69
235 884 0.323360 ACGTTATGGCAGCCAATGGT 60.323 50.000 20.84 11.50 36.95 3.55
236 885 0.101040 CACGTTATGGCAGCCAATGG 59.899 55.000 20.84 10.81 36.95 3.16
237 886 1.093972 TCACGTTATGGCAGCCAATG 58.906 50.000 20.84 11.23 36.95 2.82
238 887 2.057137 ATCACGTTATGGCAGCCAAT 57.943 45.000 20.84 9.89 36.95 3.16
239 888 1.832883 AATCACGTTATGGCAGCCAA 58.167 45.000 20.84 5.11 36.95 4.52
240 889 1.742831 GAAATCACGTTATGGCAGCCA 59.257 47.619 18.99 18.99 38.19 4.75
241 890 2.017049 AGAAATCACGTTATGGCAGCC 58.983 47.619 3.66 3.66 0.00 4.85
242 891 3.126858 TCAAGAAATCACGTTATGGCAGC 59.873 43.478 0.00 0.00 0.00 5.25
244 893 3.689161 CCTCAAGAAATCACGTTATGGCA 59.311 43.478 0.00 0.00 0.00 4.92
245 894 3.487544 GCCTCAAGAAATCACGTTATGGC 60.488 47.826 0.00 0.00 0.00 4.40
247 896 4.631377 TCAGCCTCAAGAAATCACGTTATG 59.369 41.667 0.00 0.00 0.00 1.90
248 897 4.832248 TCAGCCTCAAGAAATCACGTTAT 58.168 39.130 0.00 0.00 0.00 1.89
249 898 4.265904 TCAGCCTCAAGAAATCACGTTA 57.734 40.909 0.00 0.00 0.00 3.18
250 899 3.126001 TCAGCCTCAAGAAATCACGTT 57.874 42.857 0.00 0.00 0.00 3.99
253 902 6.459298 CCATACAATCAGCCTCAAGAAATCAC 60.459 42.308 0.00 0.00 0.00 3.06
254 903 5.591472 CCATACAATCAGCCTCAAGAAATCA 59.409 40.000 0.00 0.00 0.00 2.57
256 905 5.759059 TCCATACAATCAGCCTCAAGAAAT 58.241 37.500 0.00 0.00 0.00 2.17
257 906 5.178096 TCCATACAATCAGCCTCAAGAAA 57.822 39.130 0.00 0.00 0.00 2.52
258 907 4.384537 CCTCCATACAATCAGCCTCAAGAA 60.385 45.833 0.00 0.00 0.00 2.52
259 908 3.135348 CCTCCATACAATCAGCCTCAAGA 59.865 47.826 0.00 0.00 0.00 3.02
260 909 3.118112 ACCTCCATACAATCAGCCTCAAG 60.118 47.826 0.00 0.00 0.00 3.02
261 910 2.846206 ACCTCCATACAATCAGCCTCAA 59.154 45.455 0.00 0.00 0.00 3.02
262 911 2.171237 CACCTCCATACAATCAGCCTCA 59.829 50.000 0.00 0.00 0.00 3.86
263 912 2.435805 TCACCTCCATACAATCAGCCTC 59.564 50.000 0.00 0.00 0.00 4.70
264 913 2.481441 TCACCTCCATACAATCAGCCT 58.519 47.619 0.00 0.00 0.00 4.58
266 915 3.062763 CGATCACCTCCATACAATCAGC 58.937 50.000 0.00 0.00 0.00 4.26
267 916 4.302455 GTCGATCACCTCCATACAATCAG 58.698 47.826 0.00 0.00 0.00 2.90
270 919 2.693591 ACGTCGATCACCTCCATACAAT 59.306 45.455 0.00 0.00 0.00 2.71
271 920 2.097036 ACGTCGATCACCTCCATACAA 58.903 47.619 0.00 0.00 0.00 2.41
272 921 1.758936 ACGTCGATCACCTCCATACA 58.241 50.000 0.00 0.00 0.00 2.29
273 922 3.976793 TTACGTCGATCACCTCCATAC 57.023 47.619 0.00 0.00 0.00 2.39
274 923 3.305131 GCATTACGTCGATCACCTCCATA 60.305 47.826 0.00 0.00 0.00 2.74
282 1561 0.380733 AGCGAGCATTACGTCGATCA 59.619 50.000 0.00 0.00 38.50 2.92
288 1567 1.065701 CTGTCCTAGCGAGCATTACGT 59.934 52.381 0.00 0.00 0.00 3.57
291 1570 0.389391 GCCTGTCCTAGCGAGCATTA 59.611 55.000 0.00 0.00 0.00 1.90
292 1571 1.144936 GCCTGTCCTAGCGAGCATT 59.855 57.895 0.00 0.00 0.00 3.56
293 1572 1.617018 TTGCCTGTCCTAGCGAGCAT 61.617 55.000 0.00 0.00 0.00 3.79
294 1573 2.282783 TTGCCTGTCCTAGCGAGCA 61.283 57.895 0.00 0.00 0.00 4.26
295 1574 1.811679 GTTGCCTGTCCTAGCGAGC 60.812 63.158 0.00 0.00 0.00 5.03
296 1575 1.517257 CGTTGCCTGTCCTAGCGAG 60.517 63.158 0.00 0.00 0.00 5.03
297 1576 1.974875 TCGTTGCCTGTCCTAGCGA 60.975 57.895 0.00 0.00 0.00 4.93
298 1577 1.805945 GTCGTTGCCTGTCCTAGCG 60.806 63.158 0.00 0.00 0.00 4.26
299 1578 1.448013 GGTCGTTGCCTGTCCTAGC 60.448 63.158 0.00 0.00 0.00 3.42
300 1579 0.537188 ATGGTCGTTGCCTGTCCTAG 59.463 55.000 0.00 0.00 0.00 3.02
302 1581 1.194781 AGATGGTCGTTGCCTGTCCT 61.195 55.000 0.00 0.00 0.00 3.85
305 1584 1.831106 TCATAGATGGTCGTTGCCTGT 59.169 47.619 0.00 0.00 0.00 4.00
306 1585 2.602257 TCATAGATGGTCGTTGCCTG 57.398 50.000 0.00 0.00 0.00 4.85
307 1586 2.766263 TCTTCATAGATGGTCGTTGCCT 59.234 45.455 0.00 0.00 0.00 4.75
309 1588 4.572389 ACATTCTTCATAGATGGTCGTTGC 59.428 41.667 0.00 0.00 0.00 4.17
310 1589 6.536582 AGAACATTCTTCATAGATGGTCGTTG 59.463 38.462 0.00 0.00 34.04 4.10
311 1590 6.644347 AGAACATTCTTCATAGATGGTCGTT 58.356 36.000 0.00 0.00 34.04 3.85
315 1594 7.637511 AGGAAAGAACATTCTTCATAGATGGT 58.362 34.615 7.32 0.00 46.22 3.55
316 1595 8.517062 AAGGAAAGAACATTCTTCATAGATGG 57.483 34.615 7.32 0.00 46.22 3.51
319 1598 9.877178 GACTAAGGAAAGAACATTCTTCATAGA 57.123 33.333 7.32 0.00 46.22 1.98
320 1599 8.812329 CGACTAAGGAAAGAACATTCTTCATAG 58.188 37.037 7.32 9.52 46.22 2.23
321 1600 8.528643 TCGACTAAGGAAAGAACATTCTTCATA 58.471 33.333 7.32 0.00 46.22 2.15
322 1601 7.386851 TCGACTAAGGAAAGAACATTCTTCAT 58.613 34.615 7.32 0.00 46.22 2.57
323 1602 6.755206 TCGACTAAGGAAAGAACATTCTTCA 58.245 36.000 7.32 0.00 46.22 3.02
324 1603 7.653767 TTCGACTAAGGAAAGAACATTCTTC 57.346 36.000 7.32 2.27 46.22 2.87
326 1605 8.507249 CAATTTCGACTAAGGAAAGAACATTCT 58.493 33.333 0.00 0.00 36.88 2.40
327 1606 8.290325 ACAATTTCGACTAAGGAAAGAACATTC 58.710 33.333 0.00 0.00 36.88 2.67
328 1607 8.166422 ACAATTTCGACTAAGGAAAGAACATT 57.834 30.769 0.00 0.00 36.88 2.71
329 1608 7.745620 ACAATTTCGACTAAGGAAAGAACAT 57.254 32.000 0.00 0.00 36.88 2.71
330 1609 7.497909 AGAACAATTTCGACTAAGGAAAGAACA 59.502 33.333 0.00 0.00 36.88 3.18
331 1610 7.862648 AGAACAATTTCGACTAAGGAAAGAAC 58.137 34.615 0.00 0.00 36.88 3.01
332 1611 8.446599 AAGAACAATTTCGACTAAGGAAAGAA 57.553 30.769 0.00 0.00 36.88 2.52
333 1612 7.931948 AGAAGAACAATTTCGACTAAGGAAAGA 59.068 33.333 0.00 0.00 36.88 2.52
334 1613 8.089115 AGAAGAACAATTTCGACTAAGGAAAG 57.911 34.615 0.00 0.00 36.88 2.62
335 1614 9.720769 ATAGAAGAACAATTTCGACTAAGGAAA 57.279 29.630 0.00 0.00 36.78 3.13
336 1615 9.720769 AATAGAAGAACAATTTCGACTAAGGAA 57.279 29.630 0.00 0.00 36.78 3.36
388 1667 1.095228 AACGCCTGTCGCCATATTGG 61.095 55.000 0.00 0.00 43.23 3.16
389 1668 0.732571 AAACGCCTGTCGCCATATTG 59.267 50.000 0.00 0.00 43.23 1.90
390 1669 1.459450 AAAACGCCTGTCGCCATATT 58.541 45.000 0.00 0.00 43.23 1.28
391 1670 2.210116 CTAAAACGCCTGTCGCCATAT 58.790 47.619 0.00 0.00 43.23 1.78
392 1671 1.647346 CTAAAACGCCTGTCGCCATA 58.353 50.000 0.00 0.00 43.23 2.74
393 1672 1.644786 GCTAAAACGCCTGTCGCCAT 61.645 55.000 0.00 0.00 43.23 4.40
394 1673 2.322081 GCTAAAACGCCTGTCGCCA 61.322 57.895 0.00 0.00 43.23 5.69
395 1674 0.738412 TAGCTAAAACGCCTGTCGCC 60.738 55.000 0.00 0.00 43.23 5.54
396 1675 0.645868 CTAGCTAAAACGCCTGTCGC 59.354 55.000 0.00 0.00 43.23 5.19
397 1676 0.645868 GCTAGCTAAAACGCCTGTCG 59.354 55.000 7.70 0.00 45.38 4.35
398 1677 1.722011 TGCTAGCTAAAACGCCTGTC 58.278 50.000 17.23 0.00 0.00 3.51
399 1678 2.076863 CTTGCTAGCTAAAACGCCTGT 58.923 47.619 17.23 0.00 0.00 4.00
400 1679 1.398390 CCTTGCTAGCTAAAACGCCTG 59.602 52.381 17.23 0.00 0.00 4.85
401 1680 1.739067 CCTTGCTAGCTAAAACGCCT 58.261 50.000 17.23 0.00 0.00 5.52
402 1681 0.098905 GCCTTGCTAGCTAAAACGCC 59.901 55.000 17.23 0.00 0.00 5.68
403 1682 0.247695 CGCCTTGCTAGCTAAAACGC 60.248 55.000 17.23 6.72 0.00 4.84
404 1683 0.247695 GCGCCTTGCTAGCTAAAACG 60.248 55.000 17.23 13.81 41.73 3.60
405 1684 0.802494 TGCGCCTTGCTAGCTAAAAC 59.198 50.000 17.23 1.89 46.63 2.43
406 1685 1.086696 CTGCGCCTTGCTAGCTAAAA 58.913 50.000 17.23 0.60 46.63 1.52
407 1686 0.036388 ACTGCGCCTTGCTAGCTAAA 60.036 50.000 17.23 1.40 46.63 1.85
408 1687 0.740868 CACTGCGCCTTGCTAGCTAA 60.741 55.000 17.23 7.78 46.63 3.09
409 1688 1.153568 CACTGCGCCTTGCTAGCTA 60.154 57.895 17.23 7.59 46.63 3.32
410 1689 2.435586 CACTGCGCCTTGCTAGCT 60.436 61.111 17.23 0.00 46.63 3.32
412 1691 0.742281 ATCACACTGCGCCTTGCTAG 60.742 55.000 4.18 0.00 46.63 3.42
413 1692 0.740868 GATCACACTGCGCCTTGCTA 60.741 55.000 4.18 0.00 46.63 3.49
414 1693 2.033141 ATCACACTGCGCCTTGCT 59.967 55.556 4.18 0.00 46.63 3.91
415 1694 2.482374 GATCACACTGCGCCTTGC 59.518 61.111 4.18 0.00 46.70 4.01
416 1695 1.086067 ATCGATCACACTGCGCCTTG 61.086 55.000 4.18 4.01 0.00 3.61
417 1696 0.807667 GATCGATCACACTGCGCCTT 60.808 55.000 20.52 0.00 0.00 4.35
418 1697 1.227089 GATCGATCACACTGCGCCT 60.227 57.895 20.52 0.00 0.00 5.52
419 1698 2.240500 GGATCGATCACACTGCGCC 61.241 63.158 25.93 2.98 0.00 6.53
422 1701 2.283298 ACAATGGATCGATCACACTGC 58.717 47.619 25.93 8.76 0.00 4.40
423 1702 4.655027 CAAACAATGGATCGATCACACTG 58.345 43.478 25.93 21.22 0.00 3.66
424 1703 4.952262 CAAACAATGGATCGATCACACT 57.048 40.909 25.93 9.56 0.00 3.55
466 1745 4.201628 CGTTTGCCAAAACATCGACAAAAA 60.202 37.500 0.00 0.00 45.01 1.94
467 1746 3.304559 CGTTTGCCAAAACATCGACAAAA 59.695 39.130 0.00 0.00 45.01 2.44
468 1747 2.854777 CGTTTGCCAAAACATCGACAAA 59.145 40.909 0.00 0.00 45.01 2.83
469 1748 2.097629 TCGTTTGCCAAAACATCGACAA 59.902 40.909 0.00 0.00 45.01 3.18
470 1749 1.671328 TCGTTTGCCAAAACATCGACA 59.329 42.857 0.00 0.00 45.01 4.35
472 1751 2.920227 GCATCGTTTGCCAAAACATCGA 60.920 45.455 3.56 3.56 45.01 3.59
473 1752 1.386412 GCATCGTTTGCCAAAACATCG 59.614 47.619 0.00 0.00 45.01 3.84
484 1763 4.678287 GCTCAAATATGGATGCATCGTTTG 59.322 41.667 24.38 24.38 0.00 2.93
486 1765 3.884693 TGCTCAAATATGGATGCATCGTT 59.115 39.130 20.15 12.25 0.00 3.85
487 1766 3.479489 TGCTCAAATATGGATGCATCGT 58.521 40.909 20.15 13.62 0.00 3.73
488 1767 4.155280 TCATGCTCAAATATGGATGCATCG 59.845 41.667 20.15 4.96 36.78 3.84
489 1768 5.638596 TCATGCTCAAATATGGATGCATC 57.361 39.130 18.81 18.81 36.78 3.91
490 1769 6.413783 TTTCATGCTCAAATATGGATGCAT 57.586 33.333 4.68 4.68 38.17 3.96
491 1770 5.855740 TTTCATGCTCAAATATGGATGCA 57.144 34.783 0.00 0.00 34.29 3.96
501 1780 7.967854 CACGGAGTTTTATATTTCATGCTCAAA 59.032 33.333 0.00 0.00 41.61 2.69
502 1781 7.335673 TCACGGAGTTTTATATTTCATGCTCAA 59.664 33.333 0.00 0.00 41.61 3.02
503 1782 6.821160 TCACGGAGTTTTATATTTCATGCTCA 59.179 34.615 0.00 0.00 41.61 4.26
505 1784 6.238103 CGTCACGGAGTTTTATATTTCATGCT 60.238 38.462 0.00 0.00 41.61 3.79
507 1786 7.117454 GTCGTCACGGAGTTTTATATTTCATG 58.883 38.462 0.00 0.00 41.61 3.07
508 1787 6.020121 CGTCGTCACGGAGTTTTATATTTCAT 60.020 38.462 0.00 0.00 41.61 2.57
510 1789 5.711302 CGTCGTCACGGAGTTTTATATTTC 58.289 41.667 0.00 0.00 41.61 2.17
511 1790 5.691508 CGTCGTCACGGAGTTTTATATTT 57.308 39.130 0.00 0.00 41.61 1.40
544 1823 6.158695 TCATCTAGCAGGTCTCCCTTATTTTT 59.841 38.462 0.00 0.00 39.89 1.94
545 1824 5.667626 TCATCTAGCAGGTCTCCCTTATTTT 59.332 40.000 0.00 0.00 39.89 1.82
546 1825 5.071115 GTCATCTAGCAGGTCTCCCTTATTT 59.929 44.000 0.00 0.00 39.89 1.40
547 1826 4.591072 GTCATCTAGCAGGTCTCCCTTATT 59.409 45.833 0.00 0.00 39.89 1.40
548 1827 4.156477 GTCATCTAGCAGGTCTCCCTTAT 58.844 47.826 0.00 0.00 39.89 1.73
549 1828 3.567397 GTCATCTAGCAGGTCTCCCTTA 58.433 50.000 0.00 0.00 39.89 2.69
550 1829 2.393646 GTCATCTAGCAGGTCTCCCTT 58.606 52.381 0.00 0.00 39.89 3.95
551 1830 1.752436 CGTCATCTAGCAGGTCTCCCT 60.752 57.143 0.00 0.00 44.02 4.20
552 1831 0.671251 CGTCATCTAGCAGGTCTCCC 59.329 60.000 0.00 0.00 0.00 4.30
555 1834 1.479709 AAGCGTCATCTAGCAGGTCT 58.520 50.000 0.00 0.00 35.48 3.85
557 1836 3.243907 GGATTAAGCGTCATCTAGCAGGT 60.244 47.826 0.00 0.00 35.48 4.00
558 1837 3.321497 GGATTAAGCGTCATCTAGCAGG 58.679 50.000 0.00 0.00 35.48 4.85
560 1839 2.965831 AGGGATTAAGCGTCATCTAGCA 59.034 45.455 0.00 0.00 35.48 3.49
566 1845 7.393515 GGGAATATTTTAGGGATTAAGCGTCAT 59.606 37.037 0.00 0.00 0.00 3.06
567 1846 6.713450 GGGAATATTTTAGGGATTAAGCGTCA 59.287 38.462 0.00 0.00 0.00 4.35
568 1847 6.150641 GGGGAATATTTTAGGGATTAAGCGTC 59.849 42.308 0.00 0.00 0.00 5.19
569 1848 6.008331 GGGGAATATTTTAGGGATTAAGCGT 58.992 40.000 0.00 0.00 0.00 5.07
570 1849 6.246163 AGGGGAATATTTTAGGGATTAAGCG 58.754 40.000 0.00 0.00 0.00 4.68
571 1850 7.238710 TGAGGGGAATATTTTAGGGATTAAGC 58.761 38.462 0.00 0.00 0.00 3.09
625 2136 8.400186 CGGGAGTTATCATTACCGTTTTTATTT 58.600 33.333 0.00 0.00 36.78 1.40
626 2137 7.769970 TCGGGAGTTATCATTACCGTTTTTATT 59.230 33.333 0.00 0.00 41.82 1.40
627 2138 7.274447 TCGGGAGTTATCATTACCGTTTTTAT 58.726 34.615 0.00 0.00 41.82 1.40
628 2139 6.638610 TCGGGAGTTATCATTACCGTTTTTA 58.361 36.000 0.00 0.00 41.82 1.52
629 2140 5.490159 TCGGGAGTTATCATTACCGTTTTT 58.510 37.500 0.00 0.00 41.82 1.94
630 2141 5.088680 TCGGGAGTTATCATTACCGTTTT 57.911 39.130 0.00 0.00 41.82 2.43
631 2142 4.741321 TCGGGAGTTATCATTACCGTTT 57.259 40.909 0.00 0.00 41.82 3.60
632 2143 4.741321 TTCGGGAGTTATCATTACCGTT 57.259 40.909 0.00 0.00 41.82 4.44
633 2144 4.100498 ACATTCGGGAGTTATCATTACCGT 59.900 41.667 0.00 0.00 41.82 4.83
634 2145 4.628074 ACATTCGGGAGTTATCATTACCG 58.372 43.478 0.00 0.00 42.45 4.02
635 2146 5.176958 CGAACATTCGGGAGTTATCATTACC 59.823 44.000 6.11 0.00 46.30 2.85
636 2147 6.211664 CGAACATTCGGGAGTTATCATTAC 57.788 41.667 6.11 0.00 46.30 1.89
651 2162 3.065371 CCATGCTTAACTCCCGAACATTC 59.935 47.826 0.00 0.00 0.00 2.67
652 2163 3.016736 CCATGCTTAACTCCCGAACATT 58.983 45.455 0.00 0.00 0.00 2.71
653 2164 2.643551 CCATGCTTAACTCCCGAACAT 58.356 47.619 0.00 0.00 0.00 2.71
654 2165 1.948611 GCCATGCTTAACTCCCGAACA 60.949 52.381 0.00 0.00 0.00 3.18
655 2166 0.733150 GCCATGCTTAACTCCCGAAC 59.267 55.000 0.00 0.00 0.00 3.95
656 2167 0.326595 TGCCATGCTTAACTCCCGAA 59.673 50.000 0.00 0.00 0.00 4.30
657 2168 0.326595 TTGCCATGCTTAACTCCCGA 59.673 50.000 0.00 0.00 0.00 5.14
658 2169 0.451783 GTTGCCATGCTTAACTCCCG 59.548 55.000 0.00 0.00 0.00 5.14
659 2170 0.817654 GGTTGCCATGCTTAACTCCC 59.182 55.000 0.00 0.00 0.00 4.30
660 2171 0.817654 GGGTTGCCATGCTTAACTCC 59.182 55.000 0.00 0.00 0.00 3.85
661 2172 0.451783 CGGGTTGCCATGCTTAACTC 59.548 55.000 0.00 0.00 0.00 3.01
662 2173 0.037590 TCGGGTTGCCATGCTTAACT 59.962 50.000 0.00 0.00 0.00 2.24
663 2174 0.885196 TTCGGGTTGCCATGCTTAAC 59.115 50.000 0.00 0.00 0.00 2.01
664 2175 0.885196 GTTCGGGTTGCCATGCTTAA 59.115 50.000 0.00 0.00 0.00 1.85
665 2176 1.302383 CGTTCGGGTTGCCATGCTTA 61.302 55.000 0.00 0.00 0.00 3.09
666 2177 2.625823 CGTTCGGGTTGCCATGCTT 61.626 57.895 0.00 0.00 0.00 3.91
667 2178 3.055719 CGTTCGGGTTGCCATGCT 61.056 61.111 0.00 0.00 0.00 3.79
668 2179 4.114997 CCGTTCGGGTTGCCATGC 62.115 66.667 3.04 0.00 0.00 4.06
669 2180 3.439540 CCCGTTCGGGTTGCCATG 61.440 66.667 20.65 0.00 40.49 3.66
678 2189 2.373540 TGTCATCTAAACCCGTTCGG 57.626 50.000 4.08 4.08 37.81 4.30
679 2190 4.939509 ATTTGTCATCTAAACCCGTTCG 57.060 40.909 0.00 0.00 0.00 3.95
680 2191 7.813645 ACTAAATTTGTCATCTAAACCCGTTC 58.186 34.615 0.00 0.00 0.00 3.95
681 2192 7.754851 ACTAAATTTGTCATCTAAACCCGTT 57.245 32.000 0.00 0.00 0.00 4.44
682 2193 7.754851 AACTAAATTTGTCATCTAAACCCGT 57.245 32.000 0.00 0.00 0.00 5.28
683 2194 8.447787 CAAACTAAATTTGTCATCTAAACCCG 57.552 34.615 0.00 0.00 42.46 5.28
697 2208 7.681939 TCCTAATCTCACGCAAACTAAATTT 57.318 32.000 0.00 0.00 0.00 1.82
698 2209 7.681939 TTCCTAATCTCACGCAAACTAAATT 57.318 32.000 0.00 0.00 0.00 1.82
699 2210 7.681939 TTTCCTAATCTCACGCAAACTAAAT 57.318 32.000 0.00 0.00 0.00 1.40
700 2211 7.499321 TTTTCCTAATCTCACGCAAACTAAA 57.501 32.000 0.00 0.00 0.00 1.85
701 2212 7.681939 ATTTTCCTAATCTCACGCAAACTAA 57.318 32.000 0.00 0.00 0.00 2.24
702 2213 8.826710 CATATTTTCCTAATCTCACGCAAACTA 58.173 33.333 0.00 0.00 0.00 2.24
703 2214 7.201732 CCATATTTTCCTAATCTCACGCAAACT 60.202 37.037 0.00 0.00 0.00 2.66
704 2215 6.912591 CCATATTTTCCTAATCTCACGCAAAC 59.087 38.462 0.00 0.00 0.00 2.93
705 2216 6.601613 ACCATATTTTCCTAATCTCACGCAAA 59.398 34.615 0.00 0.00 0.00 3.68
706 2217 6.119536 ACCATATTTTCCTAATCTCACGCAA 58.880 36.000 0.00 0.00 0.00 4.85
707 2218 5.680619 ACCATATTTTCCTAATCTCACGCA 58.319 37.500 0.00 0.00 0.00 5.24
708 2219 7.724305 TTACCATATTTTCCTAATCTCACGC 57.276 36.000 0.00 0.00 0.00 5.34
732 2243 9.447157 TGTCCTTTTTCATTTTTGTCAGAAAAT 57.553 25.926 0.00 0.00 39.05 1.82
733 2244 8.839310 TGTCCTTTTTCATTTTTGTCAGAAAA 57.161 26.923 0.00 0.00 37.97 2.29
734 2245 8.839310 TTGTCCTTTTTCATTTTTGTCAGAAA 57.161 26.923 0.00 0.00 0.00 2.52
735 2246 8.839310 TTTGTCCTTTTTCATTTTTGTCAGAA 57.161 26.923 0.00 0.00 0.00 3.02
736 2247 8.093927 ACTTTGTCCTTTTTCATTTTTGTCAGA 58.906 29.630 0.00 0.00 0.00 3.27
737 2248 8.255394 ACTTTGTCCTTTTTCATTTTTGTCAG 57.745 30.769 0.00 0.00 0.00 3.51
738 2249 8.502387 CAACTTTGTCCTTTTTCATTTTTGTCA 58.498 29.630 0.00 0.00 0.00 3.58
739 2250 7.481483 GCAACTTTGTCCTTTTTCATTTTTGTC 59.519 33.333 0.00 0.00 0.00 3.18
740 2251 7.304735 GCAACTTTGTCCTTTTTCATTTTTGT 58.695 30.769 0.00 0.00 0.00 2.83
741 2252 6.746822 GGCAACTTTGTCCTTTTTCATTTTTG 59.253 34.615 0.00 0.00 0.00 2.44
742 2253 6.432472 TGGCAACTTTGTCCTTTTTCATTTTT 59.568 30.769 0.00 0.00 37.61 1.94
743 2254 5.942826 TGGCAACTTTGTCCTTTTTCATTTT 59.057 32.000 0.00 0.00 37.61 1.82
744 2255 5.495640 TGGCAACTTTGTCCTTTTTCATTT 58.504 33.333 0.00 0.00 37.61 2.32
745 2256 5.096443 TGGCAACTTTGTCCTTTTTCATT 57.904 34.783 0.00 0.00 37.61 2.57
746 2257 4.751767 TGGCAACTTTGTCCTTTTTCAT 57.248 36.364 0.00 0.00 37.61 2.57
747 2258 4.405358 AGATGGCAACTTTGTCCTTTTTCA 59.595 37.500 0.00 0.00 37.61 2.69
748 2259 4.948847 AGATGGCAACTTTGTCCTTTTTC 58.051 39.130 0.00 0.00 37.61 2.29
749 2260 5.357742 AAGATGGCAACTTTGTCCTTTTT 57.642 34.783 3.93 0.00 37.61 1.94
750 2261 5.357742 AAAGATGGCAACTTTGTCCTTTT 57.642 34.783 20.19 0.00 36.43 2.27
751 2262 5.118286 CAAAAGATGGCAACTTTGTCCTTT 58.882 37.500 21.33 4.07 37.59 3.11
752 2263 4.162131 ACAAAAGATGGCAACTTTGTCCTT 59.838 37.500 21.33 4.74 37.59 3.36
753 2264 3.706086 ACAAAAGATGGCAACTTTGTCCT 59.294 39.130 21.33 5.09 37.59 3.85
754 2265 4.051237 GACAAAAGATGGCAACTTTGTCC 58.949 43.478 26.11 15.37 36.87 4.02
755 2266 4.681744 TGACAAAAGATGGCAACTTTGTC 58.318 39.130 27.90 27.90 46.71 3.18
756 2267 4.734398 TGACAAAAGATGGCAACTTTGT 57.266 36.364 21.33 19.95 46.71 2.83
764 2275 3.803778 CCAACTTGTTGACAAAAGATGGC 59.196 43.478 14.30 0.00 38.85 4.40
765 2276 3.803778 GCCAACTTGTTGACAAAAGATGG 59.196 43.478 21.57 21.57 44.77 3.51
766 2277 4.431809 TGCCAACTTGTTGACAAAAGATG 58.568 39.130 14.30 11.97 35.15 2.90
767 2278 4.734398 TGCCAACTTGTTGACAAAAGAT 57.266 36.364 14.30 3.45 35.15 2.40
768 2279 4.081752 ACATGCCAACTTGTTGACAAAAGA 60.082 37.500 14.30 0.00 35.15 2.52
769 2280 4.183101 ACATGCCAACTTGTTGACAAAAG 58.817 39.130 14.30 6.83 35.15 2.27
770 2281 4.199432 ACATGCCAACTTGTTGACAAAA 57.801 36.364 14.30 0.00 35.15 2.44
771 2282 3.883830 ACATGCCAACTTGTTGACAAA 57.116 38.095 14.30 0.00 35.15 2.83
772 2283 4.991153 TTACATGCCAACTTGTTGACAA 57.009 36.364 14.30 0.00 35.85 3.18
773 2284 4.991153 TTTACATGCCAACTTGTTGACA 57.009 36.364 14.30 9.73 35.85 3.58
774 2285 5.982516 TGATTTTACATGCCAACTTGTTGAC 59.017 36.000 14.30 4.08 35.85 3.18
775 2286 6.154203 TGATTTTACATGCCAACTTGTTGA 57.846 33.333 14.30 0.00 35.85 3.18
776 2287 7.292292 CAATGATTTTACATGCCAACTTGTTG 58.708 34.615 6.52 6.52 35.85 3.33
777 2288 6.427547 CCAATGATTTTACATGCCAACTTGTT 59.572 34.615 0.00 0.00 35.85 2.83
778 2289 5.933463 CCAATGATTTTACATGCCAACTTGT 59.067 36.000 0.00 0.00 37.82 3.16
779 2290 5.352016 CCCAATGATTTTACATGCCAACTTG 59.648 40.000 0.00 0.00 0.00 3.16
780 2291 5.490159 CCCAATGATTTTACATGCCAACTT 58.510 37.500 0.00 0.00 0.00 2.66
781 2292 4.080975 CCCCAATGATTTTACATGCCAACT 60.081 41.667 0.00 0.00 0.00 3.16
782 2293 4.081198 TCCCCAATGATTTTACATGCCAAC 60.081 41.667 0.00 0.00 0.00 3.77
783 2294 4.099633 TCCCCAATGATTTTACATGCCAA 58.900 39.130 0.00 0.00 0.00 4.52
784 2295 3.717576 TCCCCAATGATTTTACATGCCA 58.282 40.909 0.00 0.00 0.00 4.92
785 2296 4.344679 TCATCCCCAATGATTTTACATGCC 59.655 41.667 0.00 0.00 39.52 4.40
786 2297 5.534207 TCATCCCCAATGATTTTACATGC 57.466 39.130 0.00 0.00 39.52 4.06
787 2298 7.041644 GCATTTCATCCCCAATGATTTTACATG 60.042 37.037 0.00 0.00 43.87 3.21
788 2299 6.993902 GCATTTCATCCCCAATGATTTTACAT 59.006 34.615 0.00 0.00 43.87 2.29
789 2300 6.156602 AGCATTTCATCCCCAATGATTTTACA 59.843 34.615 0.00 0.00 43.87 2.41
790 2301 6.585416 AGCATTTCATCCCCAATGATTTTAC 58.415 36.000 0.00 0.00 43.87 2.01
791 2302 6.383436 TGAGCATTTCATCCCCAATGATTTTA 59.617 34.615 0.00 0.00 43.87 1.52
792 2303 5.190132 TGAGCATTTCATCCCCAATGATTTT 59.810 36.000 0.00 0.00 43.87 1.82
793 2304 4.717778 TGAGCATTTCATCCCCAATGATTT 59.282 37.500 0.00 0.00 43.87 2.17
794 2305 4.291792 TGAGCATTTCATCCCCAATGATT 58.708 39.130 0.00 0.00 43.87 2.57
795 2306 3.918566 TGAGCATTTCATCCCCAATGAT 58.081 40.909 0.00 0.00 43.87 2.45
796 2307 3.385314 TGAGCATTTCATCCCCAATGA 57.615 42.857 0.00 0.00 42.76 2.57
797 2308 4.475051 TTTGAGCATTTCATCCCCAATG 57.525 40.909 0.00 0.00 35.27 2.82
798 2309 5.397109 GGATTTTGAGCATTTCATCCCCAAT 60.397 40.000 0.00 0.00 35.27 3.16
799 2310 4.080975 GGATTTTGAGCATTTCATCCCCAA 60.081 41.667 0.00 0.00 35.27 4.12
800 2311 3.451902 GGATTTTGAGCATTTCATCCCCA 59.548 43.478 0.00 0.00 35.27 4.96
801 2312 3.491447 CGGATTTTGAGCATTTCATCCCC 60.491 47.826 0.00 0.00 35.27 4.81
802 2313 3.381272 TCGGATTTTGAGCATTTCATCCC 59.619 43.478 0.00 0.00 35.27 3.85
803 2314 4.637483 TCGGATTTTGAGCATTTCATCC 57.363 40.909 0.00 0.00 35.27 3.51
804 2315 4.496895 CGTTCGGATTTTGAGCATTTCATC 59.503 41.667 0.00 0.00 35.27 2.92
805 2316 4.082787 ACGTTCGGATTTTGAGCATTTCAT 60.083 37.500 0.00 0.00 35.27 2.57
806 2317 3.252215 ACGTTCGGATTTTGAGCATTTCA 59.748 39.130 0.00 0.00 0.00 2.69
807 2318 3.821841 ACGTTCGGATTTTGAGCATTTC 58.178 40.909 0.00 0.00 0.00 2.17
808 2319 3.915437 ACGTTCGGATTTTGAGCATTT 57.085 38.095 0.00 0.00 0.00 2.32
809 2320 3.666902 CGAACGTTCGGATTTTGAGCATT 60.667 43.478 36.53 0.00 46.30 3.56
810 2321 2.159707 CGAACGTTCGGATTTTGAGCAT 60.160 45.455 36.53 0.00 46.30 3.79
811 2322 1.193650 CGAACGTTCGGATTTTGAGCA 59.806 47.619 36.53 0.00 46.30 4.26
812 2323 1.865725 CGAACGTTCGGATTTTGAGC 58.134 50.000 36.53 4.05 46.30 4.26
823 2334 2.691927 ACCAATAACTCCCGAACGTTC 58.308 47.619 18.47 18.47 0.00 3.95
824 2335 2.845363 ACCAATAACTCCCGAACGTT 57.155 45.000 0.00 0.00 0.00 3.99
825 2336 2.845363 AACCAATAACTCCCGAACGT 57.155 45.000 0.00 0.00 0.00 3.99
826 2337 3.499157 TGAAAACCAATAACTCCCGAACG 59.501 43.478 0.00 0.00 0.00 3.95
827 2338 5.441709 TTGAAAACCAATAACTCCCGAAC 57.558 39.130 0.00 0.00 0.00 3.95
828 2339 7.762588 TTATTGAAAACCAATAACTCCCGAA 57.237 32.000 6.23 0.00 46.90 4.30
837 2348 9.646427 CCTCGGAATTTTTATTGAAAACCAATA 57.354 29.630 0.00 0.00 43.30 1.90
841 2352 6.693466 TCCCTCGGAATTTTTATTGAAAACC 58.307 36.000 0.00 0.00 39.87 3.27
843 2354 7.382898 CCTTCCCTCGGAATTTTTATTGAAAA 58.617 34.615 0.00 0.00 41.23 2.29
844 2355 6.071051 CCCTTCCCTCGGAATTTTTATTGAAA 60.071 38.462 0.00 0.00 41.23 2.69
847 2358 4.709886 ACCCTTCCCTCGGAATTTTTATTG 59.290 41.667 0.00 0.00 41.23 1.90
858 2369 1.689273 CATCTCTAACCCTTCCCTCGG 59.311 57.143 0.00 0.00 0.00 4.63
1204 2715 4.280494 CGAGGTATCGGCCGTGGG 62.280 72.222 27.15 4.89 45.39 4.61
1356 2867 1.446099 GTGGTGCGCGATTGAGAGA 60.446 57.895 12.10 0.00 0.00 3.10
1539 3050 1.726265 CTCGTCGTACCCAGTAGGC 59.274 63.158 0.00 0.00 40.58 3.93
1693 3204 0.613260 TTGACGACCTTGGAGGGATG 59.387 55.000 0.00 0.00 40.58 3.51
1737 3248 0.171231 GCTTGGCCGGATCAAAGAAC 59.829 55.000 5.05 0.00 0.00 3.01
1760 3271 2.978824 TCGGAAGAGGAAAGGCGG 59.021 61.111 0.00 0.00 34.84 6.13
1814 3325 4.410228 TGCCTTTGGAGCTATCAGTATTCT 59.590 41.667 0.00 0.00 0.00 2.40
1858 3369 2.309755 TCCTCTGCTCCCATTTGAACAT 59.690 45.455 0.00 0.00 0.00 2.71
1908 3419 0.536260 CTCCAGAGAACTCCTGCAGG 59.464 60.000 27.87 27.87 0.00 4.85
2047 3558 0.036164 TCATCAACCACCCGGACTTG 59.964 55.000 0.73 0.00 35.59 3.16
2121 3632 2.283388 TCGCCACGGGAAGGTAGT 60.283 61.111 0.00 0.00 0.00 2.73
2250 3761 1.190833 CCTCAGTCAGCCTGTCCACT 61.191 60.000 0.00 0.00 42.19 4.00
2483 3994 7.706607 GGAAATTTGTGATAAGATTTGGGCTAC 59.293 37.037 0.00 0.00 0.00 3.58
2534 4045 8.207350 AGCTTACCATACCTACATCATATGTT 57.793 34.615 1.90 0.00 41.63 2.71
2717 4228 9.020813 GTTCTTTTAACAGGAAATGTCAAGTTC 57.979 33.333 0.00 0.00 43.00 3.01
2790 4301 6.642707 TGTACTAACAAAAATGGAAGGTGG 57.357 37.500 0.00 0.00 30.91 4.61
2809 4320 5.335661 CCAACCTAAGCAACCTTGAATGTAC 60.336 44.000 0.00 0.00 32.47 2.90
2888 4399 9.679661 TTTTGATATAACTGAATGCTCCTTGTA 57.320 29.630 0.00 0.00 0.00 2.41
3006 4520 8.037382 TCTTCTGTTGATGATTTCTGATGAAC 57.963 34.615 0.00 0.00 31.02 3.18
3029 4543 7.416438 GCATCAACATCTTCCATGAATTCTTCT 60.416 37.037 7.05 0.00 0.00 2.85
3032 4546 5.655090 TGCATCAACATCTTCCATGAATTCT 59.345 36.000 7.05 0.00 0.00 2.40
3047 4561 3.719268 ACCACTCCTTATGCATCAACA 57.281 42.857 0.19 0.00 0.00 3.33
3179 4718 6.198966 GGTACAATAAAAAGCATGCTACATGC 59.801 38.462 23.00 21.83 44.85 4.06
3180 4719 7.483307 AGGTACAATAAAAAGCATGCTACATG 58.517 34.615 23.00 15.88 0.00 3.21
3181 4720 7.645058 AGGTACAATAAAAAGCATGCTACAT 57.355 32.000 23.00 12.25 0.00 2.29
3229 4768 6.998673 ACAACCTGACTATAAGCTCAAGTTTT 59.001 34.615 0.00 0.00 0.00 2.43
3373 4913 3.834726 TGGCAACCCAAACAGTCG 58.165 55.556 0.00 0.00 38.46 4.18
3410 4950 9.549078 TTTGTATCACAGTAACTCAATTACACA 57.451 29.630 0.10 0.00 45.00 3.72
3450 4990 5.829829 TGCATGATATAAAAAGCATCGCAA 58.170 33.333 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.