Multiple sequence alignment - TraesCS5B01G174500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G174500 chr5B 100.000 3827 0 0 1 3827 320401506 320405332 0.000000e+00 7068.0
1 TraesCS5B01G174500 chr5B 83.784 148 19 2 3434 3581 271941862 271942004 6.670000e-28 135.0
2 TraesCS5B01G174500 chr5A 97.281 2464 36 14 1004 3438 465389761 465392222 0.000000e+00 4150.0
3 TraesCS5B01G174500 chr5A 99.112 1464 12 1 1004 2467 556699200 556700662 0.000000e+00 2630.0
4 TraesCS5B01G174500 chr5A 99.044 1464 12 2 1004 2467 556704115 556705576 0.000000e+00 2625.0
5 TraesCS5B01G174500 chr5A 98.975 1464 14 1 1004 2467 709480880 709479418 0.000000e+00 2619.0
6 TraesCS5B01G174500 chr5A 99.602 1006 4 0 1 1006 556702961 556703966 0.000000e+00 1836.0
7 TraesCS5B01G174500 chr5A 99.205 1006 8 0 1 1006 556698046 556699051 0.000000e+00 1814.0
8 TraesCS5B01G174500 chr5A 99.303 1004 6 1 2424 3427 556700648 556701650 0.000000e+00 1814.0
9 TraesCS5B01G174500 chr5A 99.205 1006 8 0 1 1006 709482034 709481029 0.000000e+00 1814.0
10 TraesCS5B01G174500 chr5A 99.006 1006 10 0 1 1006 465388607 465389612 0.000000e+00 1803.0
11 TraesCS5B01G174500 chr5A 98.909 1008 11 0 2424 3431 709479433 709478426 0.000000e+00 1801.0
12 TraesCS5B01G174500 chr5A 99.560 909 3 1 2519 3426 556705684 556706592 0.000000e+00 1655.0
13 TraesCS5B01G174500 chr5A 89.919 248 9 5 3580 3827 374891466 374891697 4.800000e-79 305.0
14 TraesCS5B01G174500 chr5A 81.250 176 16 6 3429 3588 479407432 479407606 4.010000e-25 126.0
15 TraesCS5B01G174500 chr1D 95.895 2436 81 10 1004 3426 432576873 432579302 0.000000e+00 3927.0
16 TraesCS5B01G174500 chr1D 96.738 797 25 1 210 1006 432575929 432576724 0.000000e+00 1327.0
17 TraesCS5B01G174500 chr1D 96.682 211 7 0 2 212 432562619 432562829 6.080000e-93 351.0
18 TraesCS5B01G174500 chr1D 84.393 173 11 6 3427 3584 127925500 127925329 5.120000e-34 156.0
19 TraesCS5B01G174500 chr1D 78.443 167 20 2 3434 3585 462490925 462491090 1.130000e-15 95.3
20 TraesCS5B01G174500 chr1D 90.769 65 3 2 3532 3593 485043981 485044045 2.450000e-12 84.2
21 TraesCS5B01G174500 chr7A 99.112 1464 12 1 1004 2467 60709499 60708037 0.000000e+00 2630.0
22 TraesCS5B01G174500 chr7A 98.975 1464 14 1 1004 2467 689397751 689396289 0.000000e+00 2619.0
23 TraesCS5B01G174500 chr7A 99.304 1006 7 0 1 1006 689398905 689397900 0.000000e+00 1820.0
24 TraesCS5B01G174500 chr7A 99.103 1003 9 0 2424 3426 60708052 60707050 0.000000e+00 1803.0
25 TraesCS5B01G174500 chr7A 99.006 1006 9 1 1 1006 60710652 60709648 0.000000e+00 1801.0
26 TraesCS5B01G174500 chr7A 98.804 1003 11 1 2424 3426 689396304 689395303 0.000000e+00 1784.0
27 TraesCS5B01G174500 chr4A 96.177 1465 54 2 1004 2467 478730915 478732378 0.000000e+00 2394.0
28 TraesCS5B01G174500 chr4A 88.423 1002 89 14 7 1006 613999709 613998733 0.000000e+00 1182.0
29 TraesCS5B01G174500 chr4A 88.142 1012 95 12 4 1006 519797232 519798227 0.000000e+00 1181.0
30 TraesCS5B01G174500 chr4A 92.144 471 24 4 2424 2884 478732363 478732830 0.000000e+00 652.0
31 TraesCS5B01G174500 chr4A 96.512 172 6 0 835 1006 478730595 478730766 6.260000e-73 285.0
32 TraesCS5B01G174500 chr4A 86.047 129 14 4 3453 3581 692358214 692358338 6.670000e-28 135.0
33 TraesCS5B01G174500 chr2A 93.370 1463 90 4 1004 2460 717806828 717808289 0.000000e+00 2158.0
34 TraesCS5B01G174500 chr6A 96.318 1005 37 0 2 1006 316459001 316460005 0.000000e+00 1652.0
35 TraesCS5B01G174500 chr6A 92.054 667 32 9 2782 3428 316483850 316484515 0.000000e+00 918.0
36 TraesCS5B01G174500 chr6A 78.703 1033 180 25 2 1006 603906072 603907092 0.000000e+00 652.0
37 TraesCS5B01G174500 chr6A 93.168 161 9 2 2424 2583 316483603 316483762 6.390000e-58 235.0
38 TraesCS5B01G174500 chr6A 93.878 98 5 1 3432 3529 495353682 495353586 3.080000e-31 147.0
39 TraesCS5B01G174500 chr4B 99.537 863 4 0 2564 3426 16677590 16678452 0.000000e+00 1572.0
40 TraesCS5B01G174500 chr4B 99.337 754 4 1 1 754 16676813 16677565 0.000000e+00 1363.0
41 TraesCS5B01G174500 chr4B 93.712 652 32 3 358 1006 431016101 431015456 0.000000e+00 968.0
42 TraesCS5B01G174500 chr4B 79.029 1030 179 24 2 1006 167377891 167376874 0.000000e+00 671.0
43 TraesCS5B01G174500 chr4B 85.161 155 19 3 3434 3588 10562574 10562724 5.120000e-34 156.0
44 TraesCS5B01G174500 chr4B 93.204 103 6 1 3427 3529 83144080 83144181 2.380000e-32 150.0
45 TraesCS5B01G174500 chr3D 91.153 1006 68 14 2 1006 611423559 611424544 0.000000e+00 1345.0
46 TraesCS5B01G174500 chr3D 90.846 1005 73 9 2 1006 611435668 611436653 0.000000e+00 1328.0
47 TraesCS5B01G174500 chr3D 92.843 517 20 6 2667 3171 595095801 595095290 0.000000e+00 734.0
48 TraesCS5B01G174500 chr3D 91.150 113 6 4 3420 3529 524774041 524773930 2.380000e-32 150.0
49 TraesCS5B01G174500 chr3D 91.589 107 6 3 3425 3529 291225805 291225700 1.110000e-30 145.0
50 TraesCS5B01G174500 chr3D 93.333 60 4 0 3528 3587 30987050 30986991 5.270000e-14 89.8
51 TraesCS5B01G174500 chr2D 79.743 1012 180 22 2 1006 618324178 618323185 0.000000e+00 710.0
52 TraesCS5B01G174500 chr1A 79.530 1021 181 23 2 1006 564159650 564158642 0.000000e+00 702.0
53 TraesCS5B01G174500 chr1A 77.326 172 23 3 3433 3589 438342106 438341936 1.890000e-13 87.9
54 TraesCS5B01G174500 chr6D 78.620 1029 183 28 2 1006 39065142 39064127 0.000000e+00 647.0
55 TraesCS5B01G174500 chr5D 78.616 968 181 21 2 963 34210825 34211772 5.430000e-173 617.0
56 TraesCS5B01G174500 chr5D 96.386 249 6 3 3580 3827 282352388 282352634 1.280000e-109 407.0
57 TraesCS5B01G174500 chr5D 88.462 260 24 4 2 261 438355703 438355450 3.710000e-80 309.0
58 TraesCS5B01G174500 chr1B 90.323 341 32 1 666 1006 112757390 112757051 2.710000e-121 446.0
59 TraesCS5B01G174500 chr1B 79.651 172 18 3 3434 3590 136078179 136078348 1.450000e-19 108.0
60 TraesCS5B01G174500 chr3B 84.302 172 10 3 3434 3589 19991837 19992007 6.620000e-33 152.0
61 TraesCS5B01G174500 chr3B 90.323 62 6 0 3528 3589 391576073 391576134 8.810000e-12 82.4
62 TraesCS5B01G174500 chr2B 82.778 180 11 11 3422 3584 53410881 53410705 3.990000e-30 143.0
63 TraesCS5B01G174500 chr7B 91.667 60 5 0 3530 3589 12186564 12186623 2.450000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G174500 chr5B 320401506 320405332 3826 False 7068.000000 7068 100.000000 1 3827 1 chr5B.!!$F2 3826
1 TraesCS5B01G174500 chr5A 465388607 465392222 3615 False 2976.500000 4150 98.143500 1 3438 2 chr5A.!!$F3 3437
2 TraesCS5B01G174500 chr5A 709478426 709482034 3608 True 2078.000000 2619 99.029667 1 3431 3 chr5A.!!$R1 3430
3 TraesCS5B01G174500 chr5A 556698046 556706592 8546 False 2062.333333 2630 99.304333 1 3427 6 chr5A.!!$F4 3426
4 TraesCS5B01G174500 chr1D 432575929 432579302 3373 False 2627.000000 3927 96.316500 210 3426 2 chr1D.!!$F4 3216
5 TraesCS5B01G174500 chr7A 60707050 60710652 3602 True 2078.000000 2630 99.073667 1 3426 3 chr7A.!!$R1 3425
6 TraesCS5B01G174500 chr7A 689395303 689398905 3602 True 2074.333333 2619 99.027667 1 3426 3 chr7A.!!$R2 3425
7 TraesCS5B01G174500 chr4A 613998733 613999709 976 True 1182.000000 1182 88.423000 7 1006 1 chr4A.!!$R1 999
8 TraesCS5B01G174500 chr4A 519797232 519798227 995 False 1181.000000 1181 88.142000 4 1006 1 chr4A.!!$F1 1002
9 TraesCS5B01G174500 chr4A 478730595 478732830 2235 False 1110.333333 2394 94.944333 835 2884 3 chr4A.!!$F3 2049
10 TraesCS5B01G174500 chr2A 717806828 717808289 1461 False 2158.000000 2158 93.370000 1004 2460 1 chr2A.!!$F1 1456
11 TraesCS5B01G174500 chr6A 316459001 316460005 1004 False 1652.000000 1652 96.318000 2 1006 1 chr6A.!!$F1 1004
12 TraesCS5B01G174500 chr6A 603906072 603907092 1020 False 652.000000 652 78.703000 2 1006 1 chr6A.!!$F2 1004
13 TraesCS5B01G174500 chr6A 316483603 316484515 912 False 576.500000 918 92.611000 2424 3428 2 chr6A.!!$F3 1004
14 TraesCS5B01G174500 chr4B 16676813 16678452 1639 False 1467.500000 1572 99.437000 1 3426 2 chr4B.!!$F3 3425
15 TraesCS5B01G174500 chr4B 431015456 431016101 645 True 968.000000 968 93.712000 358 1006 1 chr4B.!!$R2 648
16 TraesCS5B01G174500 chr4B 167376874 167377891 1017 True 671.000000 671 79.029000 2 1006 1 chr4B.!!$R1 1004
17 TraesCS5B01G174500 chr3D 611423559 611424544 985 False 1345.000000 1345 91.153000 2 1006 1 chr3D.!!$F1 1004
18 TraesCS5B01G174500 chr3D 611435668 611436653 985 False 1328.000000 1328 90.846000 2 1006 1 chr3D.!!$F2 1004
19 TraesCS5B01G174500 chr3D 595095290 595095801 511 True 734.000000 734 92.843000 2667 3171 1 chr3D.!!$R4 504
20 TraesCS5B01G174500 chr2D 618323185 618324178 993 True 710.000000 710 79.743000 2 1006 1 chr2D.!!$R1 1004
21 TraesCS5B01G174500 chr1A 564158642 564159650 1008 True 702.000000 702 79.530000 2 1006 1 chr1A.!!$R2 1004
22 TraesCS5B01G174500 chr6D 39064127 39065142 1015 True 647.000000 647 78.620000 2 1006 1 chr6D.!!$R1 1004
23 TraesCS5B01G174500 chr5D 34210825 34211772 947 False 617.000000 617 78.616000 2 963 1 chr5D.!!$F1 961

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
939 1037 0.037326 ATGCAACTCTCGGAGCGAAA 60.037 50.0 1.35 0.0 34.74 3.46 F
1125 1374 1.735376 GCTGGCTAGTGCTACCGCTA 61.735 60.0 0.00 0.0 39.59 4.26 F
1791 2043 2.403252 AGTTACTCAATTGGGAGGCG 57.597 50.0 13.56 0.0 39.27 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1791 2043 0.886043 ACGACAAACCTAAACCCGCC 60.886 55.000 0.0 0.0 0.00 6.13 R
1980 2232 3.006859 CACTGGGTCTTGTCACACATAGA 59.993 47.826 0.0 0.0 0.00 1.98 R
3640 8957 1.063469 CGGAATCAAACATACCACCGC 59.937 52.381 0.0 0.0 33.24 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
939 1037 0.037326 ATGCAACTCTCGGAGCGAAA 60.037 50.000 1.35 0.00 34.74 3.46
1125 1374 1.735376 GCTGGCTAGTGCTACCGCTA 61.735 60.000 0.00 0.00 39.59 4.26
1174 1423 9.018582 TCCACTTTGTTTTGGAATTTTTGATTT 57.981 25.926 0.00 0.00 39.04 2.17
1791 2043 2.403252 AGTTACTCAATTGGGAGGCG 57.597 50.000 13.56 0.00 39.27 5.52
1980 2232 3.205282 AGCTTATGGCCAACTAATCCCTT 59.795 43.478 10.96 0.00 43.05 3.95
2292 2545 9.357652 GTTTTGTAATCAACTATGCATGTGAAT 57.642 29.630 10.16 6.10 32.93 2.57
3265 8582 5.450453 TCACAAGTTCATCAGGGGTAAAAA 58.550 37.500 0.00 0.00 0.00 1.94
3439 8756 9.984590 AAGGAATTCTCTCTATATAGTACTCCC 57.015 37.037 9.58 3.29 0.00 4.30
3440 8757 9.359195 AGGAATTCTCTCTATATAGTACTCCCT 57.641 37.037 9.58 5.18 0.00 4.20
3441 8758 9.623000 GGAATTCTCTCTATATAGTACTCCCTC 57.377 40.741 9.58 1.77 0.00 4.30
3442 8759 9.623000 GAATTCTCTCTATATAGTACTCCCTCC 57.377 40.741 9.58 0.00 0.00 4.30
3443 8760 6.795144 TCTCTCTATATAGTACTCCCTCCG 57.205 45.833 9.58 0.00 0.00 4.63
3444 8761 6.262980 TCTCTCTATATAGTACTCCCTCCGT 58.737 44.000 9.58 0.00 0.00 4.69
3445 8762 6.730038 TCTCTCTATATAGTACTCCCTCCGTT 59.270 42.308 9.58 0.00 0.00 4.44
3446 8763 7.237263 TCTCTCTATATAGTACTCCCTCCGTTT 59.763 40.741 9.58 0.00 0.00 3.60
3447 8764 7.393216 TCTCTATATAGTACTCCCTCCGTTTC 58.607 42.308 9.58 0.00 0.00 2.78
3448 8765 7.237263 TCTCTATATAGTACTCCCTCCGTTTCT 59.763 40.741 9.58 0.00 0.00 2.52
3449 8766 8.441311 TCTATATAGTACTCCCTCCGTTTCTA 57.559 38.462 9.58 0.00 0.00 2.10
3450 8767 8.884323 TCTATATAGTACTCCCTCCGTTTCTAA 58.116 37.037 9.58 0.00 0.00 2.10
3451 8768 9.512588 CTATATAGTACTCCCTCCGTTTCTAAA 57.487 37.037 0.00 0.00 0.00 1.85
3452 8769 8.953223 ATATAGTACTCCCTCCGTTTCTAAAT 57.047 34.615 0.00 0.00 0.00 1.40
3454 8771 8.953223 ATAGTACTCCCTCCGTTTCTAAATAT 57.047 34.615 0.00 0.00 0.00 1.28
3456 8773 8.773033 AGTACTCCCTCCGTTTCTAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
3457 8774 8.858094 AGTACTCCCTCCGTTTCTAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
3458 8775 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
3459 8776 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
3460 8777 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
3461 8778 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
3462 8779 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
3463 8780 8.827677 CCCTCCGTTTCTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 0.00 2.77
3464 8781 9.379791 CCTCCGTTTCTAAATATAAGTCTTTGT 57.620 33.333 0.00 0.00 0.00 2.83
3484 8801 9.974980 TCTTTGTAAAAATTTCACTATGGAACC 57.025 29.630 0.00 0.00 0.00 3.62
3485 8802 9.757227 CTTTGTAAAAATTTCACTATGGAACCA 57.243 29.630 0.00 0.00 0.00 3.67
3515 8832 8.837788 TGGATGTATGTAGATGCATTTTAGAG 57.162 34.615 0.00 0.00 35.26 2.43
3516 8833 8.432013 TGGATGTATGTAGATGCATTTTAGAGT 58.568 33.333 0.00 0.00 35.26 3.24
3517 8834 8.715998 GGATGTATGTAGATGCATTTTAGAGTG 58.284 37.037 0.00 0.00 35.26 3.51
3518 8835 9.265901 GATGTATGTAGATGCATTTTAGAGTGT 57.734 33.333 0.00 0.00 35.26 3.55
3520 8837 9.750125 TGTATGTAGATGCATTTTAGAGTGTAG 57.250 33.333 0.00 0.00 0.00 2.74
3521 8838 9.967346 GTATGTAGATGCATTTTAGAGTGTAGA 57.033 33.333 0.00 0.00 0.00 2.59
3524 8841 9.534565 TGTAGATGCATTTTAGAGTGTAGATTC 57.465 33.333 0.00 0.00 0.00 2.52
3525 8842 9.534565 GTAGATGCATTTTAGAGTGTAGATTCA 57.465 33.333 0.00 0.00 0.00 2.57
3526 8843 8.430801 AGATGCATTTTAGAGTGTAGATTCAC 57.569 34.615 0.00 0.00 38.46 3.18
3576 8893 7.909485 AAGACTTATATTTAGGAACGGAGGA 57.091 36.000 0.00 0.00 0.00 3.71
3577 8894 7.909485 AGACTTATATTTAGGAACGGAGGAA 57.091 36.000 0.00 0.00 0.00 3.36
3578 8895 7.953752 AGACTTATATTTAGGAACGGAGGAAG 58.046 38.462 0.00 0.00 0.00 3.46
3579 8896 7.564292 AGACTTATATTTAGGAACGGAGGAAGT 59.436 37.037 0.00 0.00 0.00 3.01
3580 8897 8.773033 ACTTATATTTAGGAACGGAGGAAGTA 57.227 34.615 0.00 0.00 0.00 2.24
3581 8898 9.377238 ACTTATATTTAGGAACGGAGGAAGTAT 57.623 33.333 0.00 0.00 0.00 2.12
3585 8902 9.771140 ATATTTAGGAACGGAGGAAGTATATCT 57.229 33.333 0.00 0.00 0.00 1.98
3586 8903 7.909485 TTTAGGAACGGAGGAAGTATATCTT 57.091 36.000 0.00 0.00 39.32 2.40
3587 8904 9.597681 ATTTAGGAACGGAGGAAGTATATCTTA 57.402 33.333 0.00 0.00 36.40 2.10
3588 8905 9.425248 TTTAGGAACGGAGGAAGTATATCTTAA 57.575 33.333 0.00 0.00 36.40 1.85
3589 8906 7.909485 AGGAACGGAGGAAGTATATCTTAAA 57.091 36.000 0.00 0.00 36.40 1.52
3590 8907 8.315220 AGGAACGGAGGAAGTATATCTTAAAA 57.685 34.615 0.00 0.00 36.40 1.52
3591 8908 8.765517 AGGAACGGAGGAAGTATATCTTAAAAA 58.234 33.333 0.00 0.00 36.40 1.94
3612 8929 5.468540 AAAAAGCAGGGAGGTGTTAAATC 57.531 39.130 0.00 0.00 0.00 2.17
3613 8930 2.808906 AGCAGGGAGGTGTTAAATCC 57.191 50.000 0.00 0.00 0.00 3.01
3614 8931 1.992557 AGCAGGGAGGTGTTAAATCCA 59.007 47.619 0.00 0.00 34.62 3.41
3615 8932 2.582636 AGCAGGGAGGTGTTAAATCCAT 59.417 45.455 0.00 0.00 34.62 3.41
3616 8933 3.785887 AGCAGGGAGGTGTTAAATCCATA 59.214 43.478 0.00 0.00 34.62 2.74
3617 8934 4.137543 GCAGGGAGGTGTTAAATCCATAG 58.862 47.826 0.00 0.00 34.62 2.23
3618 8935 4.141482 GCAGGGAGGTGTTAAATCCATAGA 60.141 45.833 0.00 0.00 34.62 1.98
3619 8936 5.631481 GCAGGGAGGTGTTAAATCCATAGAA 60.631 44.000 0.00 0.00 34.62 2.10
3620 8937 5.823045 CAGGGAGGTGTTAAATCCATAGAAC 59.177 44.000 0.00 0.00 34.62 3.01
3621 8938 5.104067 AGGGAGGTGTTAAATCCATAGAACC 60.104 44.000 0.00 0.00 34.62 3.62
3622 8939 5.104067 GGGAGGTGTTAAATCCATAGAACCT 60.104 44.000 0.00 0.00 39.46 3.50
3623 8940 6.424032 GGAGGTGTTAAATCCATAGAACCTT 58.576 40.000 0.00 0.00 36.93 3.50
3624 8941 6.318900 GGAGGTGTTAAATCCATAGAACCTTG 59.681 42.308 0.00 0.00 36.93 3.61
3625 8942 7.027874 AGGTGTTAAATCCATAGAACCTTGA 57.972 36.000 0.00 0.00 32.96 3.02
3626 8943 6.884836 AGGTGTTAAATCCATAGAACCTTGAC 59.115 38.462 0.00 0.00 32.96 3.18
3627 8944 6.183360 GGTGTTAAATCCATAGAACCTTGACG 60.183 42.308 0.00 0.00 0.00 4.35
3628 8945 6.592607 GTGTTAAATCCATAGAACCTTGACGA 59.407 38.462 0.00 0.00 0.00 4.20
3629 8946 7.118680 GTGTTAAATCCATAGAACCTTGACGAA 59.881 37.037 0.00 0.00 0.00 3.85
3630 8947 7.333423 TGTTAAATCCATAGAACCTTGACGAAG 59.667 37.037 0.00 0.00 0.00 3.79
3631 8948 5.677319 AATCCATAGAACCTTGACGAAGA 57.323 39.130 0.00 0.00 0.00 2.87
3632 8949 5.677319 ATCCATAGAACCTTGACGAAGAA 57.323 39.130 0.00 0.00 0.00 2.52
3633 8950 5.477607 TCCATAGAACCTTGACGAAGAAA 57.522 39.130 0.00 0.00 0.00 2.52
3634 8951 5.860611 TCCATAGAACCTTGACGAAGAAAA 58.139 37.500 0.00 0.00 0.00 2.29
3635 8952 6.292923 TCCATAGAACCTTGACGAAGAAAAA 58.707 36.000 0.00 0.00 0.00 1.94
3636 8953 6.940298 TCCATAGAACCTTGACGAAGAAAAAT 59.060 34.615 0.00 0.00 0.00 1.82
3637 8954 8.098286 TCCATAGAACCTTGACGAAGAAAAATA 58.902 33.333 0.00 0.00 0.00 1.40
3638 8955 8.175716 CCATAGAACCTTGACGAAGAAAAATAC 58.824 37.037 0.00 0.00 0.00 1.89
3639 8956 8.717821 CATAGAACCTTGACGAAGAAAAATACA 58.282 33.333 0.00 0.00 0.00 2.29
3640 8957 7.190920 AGAACCTTGACGAAGAAAAATACAG 57.809 36.000 0.00 0.00 0.00 2.74
3641 8958 5.358298 ACCTTGACGAAGAAAAATACAGC 57.642 39.130 0.00 0.00 0.00 4.40
3642 8959 4.084013 ACCTTGACGAAGAAAAATACAGCG 60.084 41.667 0.00 0.00 0.00 5.18
3643 8960 4.394795 CTTGACGAAGAAAAATACAGCGG 58.605 43.478 0.00 0.00 0.00 5.52
3644 8961 3.395639 TGACGAAGAAAAATACAGCGGT 58.604 40.909 0.00 0.00 0.00 5.68
3645 8962 3.185594 TGACGAAGAAAAATACAGCGGTG 59.814 43.478 14.13 14.13 0.00 4.94
3646 8963 2.482721 ACGAAGAAAAATACAGCGGTGG 59.517 45.455 20.20 0.80 0.00 4.61
3647 8964 2.482721 CGAAGAAAAATACAGCGGTGGT 59.517 45.455 20.20 7.22 0.00 4.16
3648 8965 3.680937 CGAAGAAAAATACAGCGGTGGTA 59.319 43.478 20.20 9.25 0.00 3.25
3649 8966 4.331717 CGAAGAAAAATACAGCGGTGGTAT 59.668 41.667 20.20 11.10 33.01 2.73
3650 8967 5.560966 AAGAAAAATACAGCGGTGGTATG 57.439 39.130 20.20 0.00 32.06 2.39
3651 8968 4.585879 AGAAAAATACAGCGGTGGTATGT 58.414 39.130 20.20 6.79 32.06 2.29
3652 8969 5.007682 AGAAAAATACAGCGGTGGTATGTT 58.992 37.500 20.20 12.01 31.55 2.71
3653 8970 5.475564 AGAAAAATACAGCGGTGGTATGTTT 59.524 36.000 20.20 18.50 39.93 2.83
3654 8971 4.695217 AAATACAGCGGTGGTATGTTTG 57.305 40.909 20.20 0.00 32.06 2.93
3655 8972 3.620427 ATACAGCGGTGGTATGTTTGA 57.380 42.857 20.20 0.00 30.56 2.69
3656 8973 2.489938 ACAGCGGTGGTATGTTTGAT 57.510 45.000 20.20 0.00 0.00 2.57
3657 8974 2.790433 ACAGCGGTGGTATGTTTGATT 58.210 42.857 20.20 0.00 0.00 2.57
3658 8975 2.747446 ACAGCGGTGGTATGTTTGATTC 59.253 45.455 20.20 0.00 0.00 2.52
3659 8976 2.097466 CAGCGGTGGTATGTTTGATTCC 59.903 50.000 6.74 0.00 0.00 3.01
3660 8977 1.063469 GCGGTGGTATGTTTGATTCCG 59.937 52.381 0.00 0.00 39.71 4.30
3661 8978 2.623535 CGGTGGTATGTTTGATTCCGA 58.376 47.619 0.00 0.00 39.17 4.55
3662 8979 3.004171 CGGTGGTATGTTTGATTCCGAA 58.996 45.455 0.00 0.00 39.17 4.30
3663 8980 3.181514 CGGTGGTATGTTTGATTCCGAAC 60.182 47.826 0.00 0.00 39.17 3.95
3665 8982 4.379082 GGTGGTATGTTTGATTCCGAACAC 60.379 45.833 0.00 0.00 46.28 3.32
3666 8983 4.454504 GTGGTATGTTTGATTCCGAACACT 59.545 41.667 0.00 0.00 46.28 3.55
3667 8984 4.454161 TGGTATGTTTGATTCCGAACACTG 59.546 41.667 0.00 0.00 46.28 3.66
3668 8985 4.693566 GGTATGTTTGATTCCGAACACTGA 59.306 41.667 0.00 0.00 46.28 3.41
3669 8986 5.354234 GGTATGTTTGATTCCGAACACTGAT 59.646 40.000 0.00 0.00 46.28 2.90
3670 8987 6.537301 GGTATGTTTGATTCCGAACACTGATA 59.463 38.462 0.00 0.00 46.28 2.15
3671 8988 7.226720 GGTATGTTTGATTCCGAACACTGATAT 59.773 37.037 0.00 0.00 46.28 1.63
3672 8989 6.662414 TGTTTGATTCCGAACACTGATATC 57.338 37.500 0.00 0.00 40.71 1.63
3673 8990 6.406370 TGTTTGATTCCGAACACTGATATCT 58.594 36.000 3.98 0.00 40.71 1.98
3674 8991 6.878923 TGTTTGATTCCGAACACTGATATCTT 59.121 34.615 3.98 0.00 40.71 2.40
3675 8992 7.390440 TGTTTGATTCCGAACACTGATATCTTT 59.610 33.333 3.98 0.00 40.71 2.52
3676 8993 7.921786 TTGATTCCGAACACTGATATCTTTT 57.078 32.000 3.98 0.00 0.00 2.27
3677 8994 7.539712 TGATTCCGAACACTGATATCTTTTC 57.460 36.000 3.98 1.07 0.00 2.29
3678 8995 7.331026 TGATTCCGAACACTGATATCTTTTCT 58.669 34.615 3.98 0.00 0.00 2.52
3679 8996 6.968131 TTCCGAACACTGATATCTTTTCTG 57.032 37.500 3.98 0.00 0.00 3.02
3680 8997 5.419542 TCCGAACACTGATATCTTTTCTGG 58.580 41.667 3.98 7.24 0.00 3.86
3681 8998 5.186992 TCCGAACACTGATATCTTTTCTGGA 59.813 40.000 3.98 8.95 0.00 3.86
3682 8999 5.874810 CCGAACACTGATATCTTTTCTGGAA 59.125 40.000 3.98 0.00 0.00 3.53
3683 9000 6.540189 CCGAACACTGATATCTTTTCTGGAAT 59.460 38.462 3.98 0.00 0.00 3.01
3684 9001 7.254590 CCGAACACTGATATCTTTTCTGGAATC 60.255 40.741 3.98 0.00 0.00 2.52
3685 9002 7.254590 CGAACACTGATATCTTTTCTGGAATCC 60.255 40.741 3.98 0.00 0.00 3.01
3686 9003 6.962182 ACACTGATATCTTTTCTGGAATCCA 58.038 36.000 0.48 0.48 0.00 3.41
3687 9004 6.825721 ACACTGATATCTTTTCTGGAATCCAC 59.174 38.462 0.00 0.00 0.00 4.02
3688 9005 6.825213 CACTGATATCTTTTCTGGAATCCACA 59.175 38.462 0.00 0.00 0.00 4.17
3689 9006 7.501559 CACTGATATCTTTTCTGGAATCCACAT 59.498 37.037 0.00 0.00 0.00 3.21
3690 9007 7.718753 ACTGATATCTTTTCTGGAATCCACATC 59.281 37.037 0.00 0.00 0.00 3.06
3691 9008 7.809238 TGATATCTTTTCTGGAATCCACATCT 58.191 34.615 0.00 0.00 0.00 2.90
3692 9009 7.718314 TGATATCTTTTCTGGAATCCACATCTG 59.282 37.037 0.00 0.00 0.00 2.90
3693 9010 4.012374 TCTTTTCTGGAATCCACATCTGC 58.988 43.478 0.00 0.00 0.00 4.26
3694 9011 3.726557 TTTCTGGAATCCACATCTGCT 57.273 42.857 0.00 0.00 0.00 4.24
3695 9012 2.996249 TCTGGAATCCACATCTGCTC 57.004 50.000 0.00 0.00 0.00 4.26
3696 9013 2.475155 TCTGGAATCCACATCTGCTCT 58.525 47.619 0.00 0.00 0.00 4.09
3697 9014 2.433604 TCTGGAATCCACATCTGCTCTC 59.566 50.000 0.00 0.00 0.00 3.20
3698 9015 2.435069 CTGGAATCCACATCTGCTCTCT 59.565 50.000 0.00 0.00 0.00 3.10
3699 9016 2.169978 TGGAATCCACATCTGCTCTCTG 59.830 50.000 0.00 0.00 0.00 3.35
3700 9017 2.433604 GGAATCCACATCTGCTCTCTGA 59.566 50.000 0.00 0.00 0.00 3.27
3701 9018 3.493002 GGAATCCACATCTGCTCTCTGAG 60.493 52.174 0.00 0.00 0.00 3.35
3702 9019 2.521547 TCCACATCTGCTCTCTGAGA 57.478 50.000 7.24 7.24 0.00 3.27
3703 9020 2.377073 TCCACATCTGCTCTCTGAGAG 58.623 52.381 26.58 26.58 45.04 3.20
3704 9021 2.101783 CCACATCTGCTCTCTGAGAGT 58.898 52.381 29.67 12.17 44.12 3.24
3705 9022 2.496871 CCACATCTGCTCTCTGAGAGTT 59.503 50.000 29.67 13.84 44.12 3.01
3706 9023 3.513662 CACATCTGCTCTCTGAGAGTTG 58.486 50.000 29.67 23.33 44.12 3.16
3707 9024 3.193056 CACATCTGCTCTCTGAGAGTTGA 59.807 47.826 29.67 26.12 44.12 3.18
3708 9025 4.025360 ACATCTGCTCTCTGAGAGTTGAT 58.975 43.478 29.67 26.86 44.12 2.57
3709 9026 4.142116 ACATCTGCTCTCTGAGAGTTGATG 60.142 45.833 36.09 36.09 46.53 3.07
3710 9027 3.694926 TCTGCTCTCTGAGAGTTGATGA 58.305 45.455 29.67 19.02 44.12 2.92
3711 9028 3.443329 TCTGCTCTCTGAGAGTTGATGAC 59.557 47.826 29.67 15.33 44.12 3.06
3712 9029 3.160269 TGCTCTCTGAGAGTTGATGACA 58.840 45.455 29.67 17.38 44.12 3.58
3713 9030 3.056962 TGCTCTCTGAGAGTTGATGACAC 60.057 47.826 29.67 14.12 44.12 3.67
3714 9031 3.193267 GCTCTCTGAGAGTTGATGACACT 59.807 47.826 29.67 0.00 44.12 3.55
3715 9032 4.675146 GCTCTCTGAGAGTTGATGACACTC 60.675 50.000 29.67 9.86 44.12 3.51
3716 9033 4.661222 TCTCTGAGAGTTGATGACACTCT 58.339 43.478 9.62 2.19 43.73 3.24
3722 9039 5.895636 AGAGTTGATGACACTCTCTACAG 57.104 43.478 0.00 0.00 36.20 2.74
3723 9040 5.321102 AGAGTTGATGACACTCTCTACAGT 58.679 41.667 0.00 0.00 36.20 3.55
3724 9041 5.772672 AGAGTTGATGACACTCTCTACAGTT 59.227 40.000 0.00 0.00 36.20 3.16
3725 9042 6.266558 AGAGTTGATGACACTCTCTACAGTTT 59.733 38.462 0.00 0.00 36.20 2.66
3726 9043 7.448777 AGAGTTGATGACACTCTCTACAGTTTA 59.551 37.037 0.00 0.00 36.20 2.01
3727 9044 7.371936 AGTTGATGACACTCTCTACAGTTTAC 58.628 38.462 0.00 0.00 0.00 2.01
3728 9045 7.231722 AGTTGATGACACTCTCTACAGTTTACT 59.768 37.037 0.00 0.00 0.00 2.24
3729 9046 8.512956 GTTGATGACACTCTCTACAGTTTACTA 58.487 37.037 0.00 0.00 0.00 1.82
3730 9047 8.270080 TGATGACACTCTCTACAGTTTACTAG 57.730 38.462 0.00 0.00 0.00 2.57
3731 9048 7.337184 TGATGACACTCTCTACAGTTTACTAGG 59.663 40.741 0.00 0.00 0.00 3.02
3732 9049 6.776744 TGACACTCTCTACAGTTTACTAGGA 58.223 40.000 0.00 0.00 0.00 2.94
3733 9050 7.229308 TGACACTCTCTACAGTTTACTAGGAA 58.771 38.462 0.00 0.00 0.00 3.36
3734 9051 7.390996 TGACACTCTCTACAGTTTACTAGGAAG 59.609 40.741 0.00 0.00 0.00 3.46
3735 9052 7.460071 ACACTCTCTACAGTTTACTAGGAAGA 58.540 38.462 0.00 0.00 0.00 2.87
3736 9053 7.608761 ACACTCTCTACAGTTTACTAGGAAGAG 59.391 40.741 0.00 0.00 0.00 2.85
3737 9054 7.825270 CACTCTCTACAGTTTACTAGGAAGAGA 59.175 40.741 13.76 3.01 0.00 3.10
3738 9055 8.384718 ACTCTCTACAGTTTACTAGGAAGAGAA 58.615 37.037 13.76 0.00 0.00 2.87
3739 9056 9.233649 CTCTCTACAGTTTACTAGGAAGAGAAA 57.766 37.037 3.87 0.00 0.00 2.52
3740 9057 9.584008 TCTCTACAGTTTACTAGGAAGAGAAAA 57.416 33.333 0.09 0.00 0.00 2.29
3745 9062 9.495572 ACAGTTTACTAGGAAGAGAAAAATCAG 57.504 33.333 0.00 0.00 0.00 2.90
3746 9063 8.940952 CAGTTTACTAGGAAGAGAAAAATCAGG 58.059 37.037 0.00 0.00 0.00 3.86
3747 9064 8.881262 AGTTTACTAGGAAGAGAAAAATCAGGA 58.119 33.333 0.00 0.00 0.00 3.86
3748 9065 9.157104 GTTTACTAGGAAGAGAAAAATCAGGAG 57.843 37.037 0.00 0.00 0.00 3.69
3749 9066 6.943899 ACTAGGAAGAGAAAAATCAGGAGT 57.056 37.500 0.00 0.00 0.00 3.85
3750 9067 6.941857 ACTAGGAAGAGAAAAATCAGGAGTC 58.058 40.000 0.00 0.00 0.00 3.36
3751 9068 5.172687 AGGAAGAGAAAAATCAGGAGTCC 57.827 43.478 0.00 0.00 0.00 3.85
3752 9069 4.599241 AGGAAGAGAAAAATCAGGAGTCCA 59.401 41.667 12.86 0.00 0.00 4.02
3753 9070 4.697828 GGAAGAGAAAAATCAGGAGTCCAC 59.302 45.833 12.86 0.00 0.00 4.02
3754 9071 4.982241 AGAGAAAAATCAGGAGTCCACA 57.018 40.909 12.86 0.00 0.00 4.17
3755 9072 5.511386 AGAGAAAAATCAGGAGTCCACAT 57.489 39.130 12.86 0.00 0.00 3.21
3756 9073 5.251764 AGAGAAAAATCAGGAGTCCACATG 58.748 41.667 12.86 0.67 0.00 3.21
3757 9074 4.338879 AGAAAAATCAGGAGTCCACATGG 58.661 43.478 12.86 0.00 0.00 3.66
3758 9075 4.043310 AGAAAAATCAGGAGTCCACATGGA 59.957 41.667 12.86 0.00 43.08 3.41
3769 9086 3.735720 TCCACATGGATTCCACATTCA 57.264 42.857 7.76 0.00 39.78 2.57
3770 9087 4.044946 TCCACATGGATTCCACATTCAA 57.955 40.909 7.76 0.00 39.78 2.69
3771 9088 4.414677 TCCACATGGATTCCACATTCAAA 58.585 39.130 7.76 0.00 39.78 2.69
3772 9089 4.220382 TCCACATGGATTCCACATTCAAAC 59.780 41.667 7.76 0.00 39.78 2.93
3773 9090 4.021280 CCACATGGATTCCACATTCAAACA 60.021 41.667 7.76 0.00 35.80 2.83
3774 9091 5.511031 CCACATGGATTCCACATTCAAACAA 60.511 40.000 7.76 0.00 35.80 2.83
3775 9092 5.990386 CACATGGATTCCACATTCAAACAAA 59.010 36.000 7.76 0.00 35.80 2.83
3776 9093 6.651643 CACATGGATTCCACATTCAAACAAAT 59.348 34.615 7.76 0.00 35.80 2.32
3777 9094 6.875195 ACATGGATTCCACATTCAAACAAATC 59.125 34.615 7.76 0.00 35.80 2.17
3778 9095 5.792741 TGGATTCCACATTCAAACAAATCC 58.207 37.500 0.00 0.00 40.57 3.01
3779 9096 5.543405 TGGATTCCACATTCAAACAAATCCT 59.457 36.000 0.00 0.00 40.71 3.24
3780 9097 6.043012 TGGATTCCACATTCAAACAAATCCTT 59.957 34.615 0.00 0.00 40.71 3.36
3781 9098 7.234371 TGGATTCCACATTCAAACAAATCCTTA 59.766 33.333 0.00 0.00 40.71 2.69
3782 9099 7.545615 GGATTCCACATTCAAACAAATCCTTAC 59.454 37.037 0.00 0.00 38.30 2.34
3783 9100 6.968263 TCCACATTCAAACAAATCCTTACA 57.032 33.333 0.00 0.00 0.00 2.41
3784 9101 7.353414 TCCACATTCAAACAAATCCTTACAA 57.647 32.000 0.00 0.00 0.00 2.41
3785 9102 7.432869 TCCACATTCAAACAAATCCTTACAAG 58.567 34.615 0.00 0.00 0.00 3.16
3786 9103 7.069331 TCCACATTCAAACAAATCCTTACAAGT 59.931 33.333 0.00 0.00 0.00 3.16
3787 9104 8.356657 CCACATTCAAACAAATCCTTACAAGTA 58.643 33.333 0.00 0.00 0.00 2.24
3788 9105 9.398170 CACATTCAAACAAATCCTTACAAGTAG 57.602 33.333 0.00 0.00 0.00 2.57
3789 9106 8.576442 ACATTCAAACAAATCCTTACAAGTAGG 58.424 33.333 0.00 0.00 0.00 3.18
3790 9107 8.792633 CATTCAAACAAATCCTTACAAGTAGGA 58.207 33.333 0.00 0.00 36.04 2.94
3791 9108 8.754991 TTCAAACAAATCCTTACAAGTAGGAA 57.245 30.769 0.00 0.00 35.13 3.36
3792 9109 8.754991 TCAAACAAATCCTTACAAGTAGGAAA 57.245 30.769 0.00 0.00 35.13 3.13
3793 9110 9.362151 TCAAACAAATCCTTACAAGTAGGAAAT 57.638 29.630 0.00 0.00 35.13 2.17
3794 9111 9.410556 CAAACAAATCCTTACAAGTAGGAAATG 57.589 33.333 0.00 0.00 35.13 2.32
3795 9112 8.934023 AACAAATCCTTACAAGTAGGAAATGA 57.066 30.769 11.76 0.00 35.13 2.57
3796 9113 8.567285 ACAAATCCTTACAAGTAGGAAATGAG 57.433 34.615 11.76 0.00 35.13 2.90
3797 9114 7.611855 ACAAATCCTTACAAGTAGGAAATGAGG 59.388 37.037 11.76 0.00 35.13 3.86
3798 9115 5.693769 TCCTTACAAGTAGGAAATGAGGG 57.306 43.478 0.00 0.00 0.00 4.30
3799 9116 4.080526 TCCTTACAAGTAGGAAATGAGGGC 60.081 45.833 0.00 0.00 0.00 5.19
3800 9117 4.324254 CCTTACAAGTAGGAAATGAGGGCA 60.324 45.833 0.00 0.00 0.00 5.36
3801 9118 3.806949 ACAAGTAGGAAATGAGGGCAA 57.193 42.857 0.00 0.00 0.00 4.52
3802 9119 3.690460 ACAAGTAGGAAATGAGGGCAAG 58.310 45.455 0.00 0.00 0.00 4.01
3803 9120 2.424956 CAAGTAGGAAATGAGGGCAAGC 59.575 50.000 0.00 0.00 0.00 4.01
3804 9121 1.635487 AGTAGGAAATGAGGGCAAGCA 59.365 47.619 0.00 0.00 0.00 3.91
3805 9122 2.041620 AGTAGGAAATGAGGGCAAGCAA 59.958 45.455 0.00 0.00 0.00 3.91
3806 9123 1.553706 AGGAAATGAGGGCAAGCAAG 58.446 50.000 0.00 0.00 0.00 4.01
3807 9124 1.203100 AGGAAATGAGGGCAAGCAAGT 60.203 47.619 0.00 0.00 0.00 3.16
3808 9125 1.620323 GGAAATGAGGGCAAGCAAGTT 59.380 47.619 0.00 0.00 0.00 2.66
3809 9126 2.825532 GGAAATGAGGGCAAGCAAGTTA 59.174 45.455 0.00 0.00 0.00 2.24
3810 9127 3.258123 GGAAATGAGGGCAAGCAAGTTAA 59.742 43.478 0.00 0.00 0.00 2.01
3811 9128 4.081476 GGAAATGAGGGCAAGCAAGTTAAT 60.081 41.667 0.00 0.00 0.00 1.40
3812 9129 5.482006 GAAATGAGGGCAAGCAAGTTAATT 58.518 37.500 0.00 0.00 0.00 1.40
3813 9130 4.725790 ATGAGGGCAAGCAAGTTAATTC 57.274 40.909 0.00 0.00 0.00 2.17
3814 9131 3.495331 TGAGGGCAAGCAAGTTAATTCA 58.505 40.909 0.00 0.00 0.00 2.57
3815 9132 3.255642 TGAGGGCAAGCAAGTTAATTCAC 59.744 43.478 0.00 0.00 0.00 3.18
3816 9133 2.562738 AGGGCAAGCAAGTTAATTCACC 59.437 45.455 0.00 0.00 0.00 4.02
3817 9134 2.562738 GGGCAAGCAAGTTAATTCACCT 59.437 45.455 0.00 0.00 0.00 4.00
3818 9135 3.367395 GGGCAAGCAAGTTAATTCACCTC 60.367 47.826 0.00 0.00 0.00 3.85
3819 9136 3.367395 GGCAAGCAAGTTAATTCACCTCC 60.367 47.826 0.00 0.00 0.00 4.30
3820 9137 3.367395 GCAAGCAAGTTAATTCACCTCCC 60.367 47.826 0.00 0.00 0.00 4.30
3821 9138 3.087370 AGCAAGTTAATTCACCTCCCC 57.913 47.619 0.00 0.00 0.00 4.81
3822 9139 2.100197 GCAAGTTAATTCACCTCCCCC 58.900 52.381 0.00 0.00 0.00 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
939 1037 9.507329 TGTTCTTTAATCTTCTTCTACAATGCT 57.493 29.630 0.00 0.00 0.00 3.79
1174 1423 6.437928 CAAATCCAGTTCTCATTTGTTTCGA 58.562 36.000 0.00 0.00 34.25 3.71
1791 2043 0.886043 ACGACAAACCTAAACCCGCC 60.886 55.000 0.00 0.00 0.00 6.13
1980 2232 3.006859 CACTGGGTCTTGTCACACATAGA 59.993 47.826 0.00 0.00 0.00 1.98
3265 8582 3.069586 TGAAATGACACCTGAGAAGACGT 59.930 43.478 0.00 0.00 0.00 4.34
3431 8748 8.773033 TTATATTTAGAAACGGAGGGAGTACT 57.227 34.615 0.00 0.00 0.00 2.73
3432 8749 8.637099 ACTTATATTTAGAAACGGAGGGAGTAC 58.363 37.037 0.00 0.00 0.00 2.73
3438 8755 9.379791 ACAAAGACTTATATTTAGAAACGGAGG 57.620 33.333 0.00 0.00 0.00 4.30
3458 8775 9.974980 GGTTCCATAGTGAAATTTTTACAAAGA 57.025 29.630 6.79 0.00 0.00 2.52
3459 8776 9.757227 TGGTTCCATAGTGAAATTTTTACAAAG 57.243 29.630 6.79 0.00 0.00 2.77
3489 8806 9.445878 CTCTAAAATGCATCTACATACATCCAT 57.554 33.333 0.00 0.00 0.00 3.41
3490 8807 8.432013 ACTCTAAAATGCATCTACATACATCCA 58.568 33.333 0.00 0.00 0.00 3.41
3491 8808 8.715998 CACTCTAAAATGCATCTACATACATCC 58.284 37.037 0.00 0.00 0.00 3.51
3492 8809 9.265901 ACACTCTAAAATGCATCTACATACATC 57.734 33.333 0.00 0.00 0.00 3.06
3494 8811 9.750125 CTACACTCTAAAATGCATCTACATACA 57.250 33.333 0.00 0.00 0.00 2.29
3495 8812 9.967346 TCTACACTCTAAAATGCATCTACATAC 57.033 33.333 0.00 0.00 0.00 2.39
3498 8815 9.534565 GAATCTACACTCTAAAATGCATCTACA 57.465 33.333 0.00 0.00 0.00 2.74
3499 8816 9.534565 TGAATCTACACTCTAAAATGCATCTAC 57.465 33.333 0.00 0.00 0.00 2.59
3500 8817 9.534565 GTGAATCTACACTCTAAAATGCATCTA 57.465 33.333 0.00 0.00 37.73 1.98
3501 8818 8.263640 AGTGAATCTACACTCTAAAATGCATCT 58.736 33.333 0.00 0.00 46.36 2.90
3502 8819 8.430801 AGTGAATCTACACTCTAAAATGCATC 57.569 34.615 0.00 0.00 46.36 3.91
3550 8867 9.425248 TCCTCCGTTCCTAAATATAAGTCTTTA 57.575 33.333 0.00 0.00 0.00 1.85
3551 8868 8.315220 TCCTCCGTTCCTAAATATAAGTCTTT 57.685 34.615 0.00 0.00 0.00 2.52
3552 8869 7.909485 TCCTCCGTTCCTAAATATAAGTCTT 57.091 36.000 0.00 0.00 0.00 3.01
3553 8870 7.564292 ACTTCCTCCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
3554 8871 7.724287 ACTTCCTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
3555 8872 7.672122 ACTTCCTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
3559 8876 9.771140 AGATATACTTCCTCCGTTCCTAAATAT 57.229 33.333 0.00 0.00 0.00 1.28
3560 8877 9.597681 AAGATATACTTCCTCCGTTCCTAAATA 57.402 33.333 0.00 0.00 32.91 1.40
3561 8878 8.493787 AAGATATACTTCCTCCGTTCCTAAAT 57.506 34.615 0.00 0.00 32.91 1.40
3562 8879 7.909485 AAGATATACTTCCTCCGTTCCTAAA 57.091 36.000 0.00 0.00 32.91 1.85
3563 8880 9.425248 TTTAAGATATACTTCCTCCGTTCCTAA 57.575 33.333 0.00 0.00 39.72 2.69
3564 8881 9.425248 TTTTAAGATATACTTCCTCCGTTCCTA 57.575 33.333 0.00 0.00 39.72 2.94
3565 8882 7.909485 TTTAAGATATACTTCCTCCGTTCCT 57.091 36.000 0.00 0.00 39.72 3.36
3566 8883 8.953368 TTTTTAAGATATACTTCCTCCGTTCC 57.047 34.615 0.00 0.00 39.72 3.62
3590 8907 4.283467 GGATTTAACACCTCCCTGCTTTTT 59.717 41.667 0.00 0.00 0.00 1.94
3591 8908 3.832490 GGATTTAACACCTCCCTGCTTTT 59.168 43.478 0.00 0.00 0.00 2.27
3592 8909 3.181423 TGGATTTAACACCTCCCTGCTTT 60.181 43.478 0.00 0.00 0.00 3.51
3593 8910 2.378547 TGGATTTAACACCTCCCTGCTT 59.621 45.455 0.00 0.00 0.00 3.91
3594 8911 1.992557 TGGATTTAACACCTCCCTGCT 59.007 47.619 0.00 0.00 0.00 4.24
3595 8912 2.507407 TGGATTTAACACCTCCCTGC 57.493 50.000 0.00 0.00 0.00 4.85
3596 8913 5.630415 TCTATGGATTTAACACCTCCCTG 57.370 43.478 0.00 0.00 0.00 4.45
3597 8914 5.104067 GGTTCTATGGATTTAACACCTCCCT 60.104 44.000 0.00 0.00 0.00 4.20
3598 8915 5.104067 AGGTTCTATGGATTTAACACCTCCC 60.104 44.000 0.00 0.00 0.00 4.30
3599 8916 6.002653 AGGTTCTATGGATTTAACACCTCC 57.997 41.667 0.00 0.00 0.00 4.30
3600 8917 7.065923 GTCAAGGTTCTATGGATTTAACACCTC 59.934 40.741 0.00 0.00 31.99 3.85
3601 8918 6.884836 GTCAAGGTTCTATGGATTTAACACCT 59.115 38.462 0.00 0.00 34.77 4.00
3602 8919 6.183360 CGTCAAGGTTCTATGGATTTAACACC 60.183 42.308 0.00 0.00 0.00 4.16
3603 8920 6.592607 TCGTCAAGGTTCTATGGATTTAACAC 59.407 38.462 0.00 0.00 0.00 3.32
3604 8921 6.703319 TCGTCAAGGTTCTATGGATTTAACA 58.297 36.000 0.00 0.00 0.00 2.41
3605 8922 7.548075 TCTTCGTCAAGGTTCTATGGATTTAAC 59.452 37.037 0.00 0.00 0.00 2.01
3606 8923 7.617225 TCTTCGTCAAGGTTCTATGGATTTAA 58.383 34.615 0.00 0.00 0.00 1.52
3607 8924 7.177832 TCTTCGTCAAGGTTCTATGGATTTA 57.822 36.000 0.00 0.00 0.00 1.40
3608 8925 6.049955 TCTTCGTCAAGGTTCTATGGATTT 57.950 37.500 0.00 0.00 0.00 2.17
3609 8926 5.677319 TCTTCGTCAAGGTTCTATGGATT 57.323 39.130 0.00 0.00 0.00 3.01
3610 8927 5.677319 TTCTTCGTCAAGGTTCTATGGAT 57.323 39.130 0.00 0.00 0.00 3.41
3611 8928 5.477607 TTTCTTCGTCAAGGTTCTATGGA 57.522 39.130 0.00 0.00 0.00 3.41
3612 8929 6.554334 TTTTTCTTCGTCAAGGTTCTATGG 57.446 37.500 0.00 0.00 0.00 2.74
3613 8930 8.717821 TGTATTTTTCTTCGTCAAGGTTCTATG 58.282 33.333 0.00 0.00 0.00 2.23
3614 8931 8.842358 TGTATTTTTCTTCGTCAAGGTTCTAT 57.158 30.769 0.00 0.00 0.00 1.98
3615 8932 7.095355 GCTGTATTTTTCTTCGTCAAGGTTCTA 60.095 37.037 0.00 0.00 0.00 2.10
3616 8933 6.293462 GCTGTATTTTTCTTCGTCAAGGTTCT 60.293 38.462 0.00 0.00 0.00 3.01
3617 8934 5.851703 GCTGTATTTTTCTTCGTCAAGGTTC 59.148 40.000 0.00 0.00 0.00 3.62
3618 8935 5.560183 CGCTGTATTTTTCTTCGTCAAGGTT 60.560 40.000 0.00 0.00 0.00 3.50
3619 8936 4.084013 CGCTGTATTTTTCTTCGTCAAGGT 60.084 41.667 0.00 0.00 0.00 3.50
3620 8937 4.394795 CGCTGTATTTTTCTTCGTCAAGG 58.605 43.478 0.00 0.00 0.00 3.61
3621 8938 4.084013 ACCGCTGTATTTTTCTTCGTCAAG 60.084 41.667 0.00 0.00 0.00 3.02
3622 8939 3.810941 ACCGCTGTATTTTTCTTCGTCAA 59.189 39.130 0.00 0.00 0.00 3.18
3623 8940 3.185594 CACCGCTGTATTTTTCTTCGTCA 59.814 43.478 0.00 0.00 0.00 4.35
3624 8941 3.424433 CCACCGCTGTATTTTTCTTCGTC 60.424 47.826 0.00 0.00 0.00 4.20
3625 8942 2.482721 CCACCGCTGTATTTTTCTTCGT 59.517 45.455 0.00 0.00 0.00 3.85
3626 8943 2.482721 ACCACCGCTGTATTTTTCTTCG 59.517 45.455 0.00 0.00 0.00 3.79
3627 8944 5.123344 ACATACCACCGCTGTATTTTTCTTC 59.877 40.000 0.00 0.00 0.00 2.87
3628 8945 5.007682 ACATACCACCGCTGTATTTTTCTT 58.992 37.500 0.00 0.00 0.00 2.52
3629 8946 4.585879 ACATACCACCGCTGTATTTTTCT 58.414 39.130 0.00 0.00 0.00 2.52
3630 8947 4.957759 ACATACCACCGCTGTATTTTTC 57.042 40.909 0.00 0.00 0.00 2.29
3631 8948 5.241949 TCAAACATACCACCGCTGTATTTTT 59.758 36.000 0.00 0.00 31.92 1.94
3632 8949 4.762765 TCAAACATACCACCGCTGTATTTT 59.237 37.500 0.00 0.00 0.00 1.82
3633 8950 4.328536 TCAAACATACCACCGCTGTATTT 58.671 39.130 0.00 0.00 0.00 1.40
3634 8951 3.945346 TCAAACATACCACCGCTGTATT 58.055 40.909 0.00 0.00 0.00 1.89
3635 8952 3.620427 TCAAACATACCACCGCTGTAT 57.380 42.857 0.00 0.00 0.00 2.29
3636 8953 3.620427 ATCAAACATACCACCGCTGTA 57.380 42.857 0.00 0.00 0.00 2.74
3637 8954 2.489938 ATCAAACATACCACCGCTGT 57.510 45.000 0.00 0.00 0.00 4.40
3638 8955 2.097466 GGAATCAAACATACCACCGCTG 59.903 50.000 0.00 0.00 0.00 5.18
3639 8956 2.365582 GGAATCAAACATACCACCGCT 58.634 47.619 0.00 0.00 0.00 5.52
3640 8957 1.063469 CGGAATCAAACATACCACCGC 59.937 52.381 0.00 0.00 33.24 5.68
3641 8958 2.623535 TCGGAATCAAACATACCACCG 58.376 47.619 0.00 0.00 40.36 4.94
3642 8959 3.754323 TGTTCGGAATCAAACATACCACC 59.246 43.478 0.00 0.00 30.73 4.61
3643 8960 4.454504 AGTGTTCGGAATCAAACATACCAC 59.545 41.667 4.22 0.00 37.67 4.16
3644 8961 4.454161 CAGTGTTCGGAATCAAACATACCA 59.546 41.667 4.22 0.00 37.67 3.25
3645 8962 4.693566 TCAGTGTTCGGAATCAAACATACC 59.306 41.667 4.22 0.00 37.67 2.73
3646 8963 5.856126 TCAGTGTTCGGAATCAAACATAC 57.144 39.130 4.22 0.00 37.67 2.39
3647 8964 8.204160 AGATATCAGTGTTCGGAATCAAACATA 58.796 33.333 5.32 0.00 37.67 2.29
3648 8965 7.050377 AGATATCAGTGTTCGGAATCAAACAT 58.950 34.615 5.32 0.00 37.67 2.71
3649 8966 6.406370 AGATATCAGTGTTCGGAATCAAACA 58.594 36.000 5.32 0.00 33.18 2.83
3650 8967 6.910536 AGATATCAGTGTTCGGAATCAAAC 57.089 37.500 5.32 0.00 0.00 2.93
3651 8968 7.921786 AAAGATATCAGTGTTCGGAATCAAA 57.078 32.000 5.32 0.00 0.00 2.69
3652 8969 7.824289 AGAAAAGATATCAGTGTTCGGAATCAA 59.176 33.333 5.32 0.00 0.00 2.57
3653 8970 7.278646 CAGAAAAGATATCAGTGTTCGGAATCA 59.721 37.037 5.32 0.00 0.00 2.57
3654 8971 7.254590 CCAGAAAAGATATCAGTGTTCGGAATC 60.255 40.741 5.32 0.00 0.00 2.52
3655 8972 6.540189 CCAGAAAAGATATCAGTGTTCGGAAT 59.460 38.462 5.32 0.00 0.00 3.01
3656 8973 5.874810 CCAGAAAAGATATCAGTGTTCGGAA 59.125 40.000 5.32 0.00 0.00 4.30
3657 8974 5.186992 TCCAGAAAAGATATCAGTGTTCGGA 59.813 40.000 5.32 9.96 0.00 4.55
3658 8975 5.419542 TCCAGAAAAGATATCAGTGTTCGG 58.580 41.667 5.32 8.23 0.00 4.30
3659 8976 6.968131 TTCCAGAAAAGATATCAGTGTTCG 57.032 37.500 5.32 0.82 0.00 3.95
3660 8977 7.554118 TGGATTCCAGAAAAGATATCAGTGTTC 59.446 37.037 0.00 3.00 0.00 3.18
3661 8978 7.337942 GTGGATTCCAGAAAAGATATCAGTGTT 59.662 37.037 5.39 0.00 32.34 3.32
3662 8979 6.825721 GTGGATTCCAGAAAAGATATCAGTGT 59.174 38.462 5.39 0.00 32.34 3.55
3663 8980 6.825213 TGTGGATTCCAGAAAAGATATCAGTG 59.175 38.462 5.39 0.00 32.34 3.66
3664 8981 6.962182 TGTGGATTCCAGAAAAGATATCAGT 58.038 36.000 5.39 0.00 32.34 3.41
3665 8982 7.937942 AGATGTGGATTCCAGAAAAGATATCAG 59.062 37.037 5.39 0.00 32.34 2.90
3666 8983 7.718314 CAGATGTGGATTCCAGAAAAGATATCA 59.282 37.037 5.39 0.00 32.34 2.15
3667 8984 7.308469 GCAGATGTGGATTCCAGAAAAGATATC 60.308 40.741 5.39 0.00 32.34 1.63
3668 8985 6.489361 GCAGATGTGGATTCCAGAAAAGATAT 59.511 38.462 5.39 0.00 32.34 1.63
3669 8986 5.824624 GCAGATGTGGATTCCAGAAAAGATA 59.175 40.000 5.39 0.00 32.34 1.98
3670 8987 4.643784 GCAGATGTGGATTCCAGAAAAGAT 59.356 41.667 5.39 0.00 32.34 2.40
3671 8988 4.012374 GCAGATGTGGATTCCAGAAAAGA 58.988 43.478 5.39 0.00 32.34 2.52
3672 8989 4.015084 AGCAGATGTGGATTCCAGAAAAG 58.985 43.478 5.39 0.31 32.34 2.27
3673 8990 4.012374 GAGCAGATGTGGATTCCAGAAAA 58.988 43.478 5.39 0.00 32.34 2.29
3674 8991 3.265221 AGAGCAGATGTGGATTCCAGAAA 59.735 43.478 5.39 0.00 32.34 2.52
3675 8992 2.842496 AGAGCAGATGTGGATTCCAGAA 59.158 45.455 5.39 0.00 32.34 3.02
3676 8993 2.433604 GAGAGCAGATGTGGATTCCAGA 59.566 50.000 5.39 5.09 32.34 3.86
3677 8994 2.435069 AGAGAGCAGATGTGGATTCCAG 59.565 50.000 5.39 0.00 32.34 3.86
3678 8995 2.169978 CAGAGAGCAGATGTGGATTCCA 59.830 50.000 0.00 0.00 0.00 3.53
3679 8996 2.433604 TCAGAGAGCAGATGTGGATTCC 59.566 50.000 0.00 0.00 0.00 3.01
3680 8997 3.384146 TCTCAGAGAGCAGATGTGGATTC 59.616 47.826 0.00 0.00 0.00 2.52
3681 8998 3.372897 TCTCAGAGAGCAGATGTGGATT 58.627 45.455 0.00 0.00 0.00 3.01
3682 8999 2.960384 CTCTCAGAGAGCAGATGTGGAT 59.040 50.000 14.74 0.00 35.30 3.41
3683 9000 2.291475 ACTCTCAGAGAGCAGATGTGGA 60.291 50.000 25.20 0.00 46.12 4.02
3684 9001 2.101783 ACTCTCAGAGAGCAGATGTGG 58.898 52.381 25.20 1.92 46.12 4.17
3685 9002 3.193056 TCAACTCTCAGAGAGCAGATGTG 59.807 47.826 25.20 14.03 46.12 3.21
3686 9003 3.429492 TCAACTCTCAGAGAGCAGATGT 58.571 45.455 25.20 4.72 46.12 3.06
3687 9004 4.098196 TCATCAACTCTCAGAGAGCAGATG 59.902 45.833 32.97 32.97 46.12 2.90
3688 9005 4.098349 GTCATCAACTCTCAGAGAGCAGAT 59.902 45.833 25.20 23.00 46.12 2.90
3689 9006 3.443329 GTCATCAACTCTCAGAGAGCAGA 59.557 47.826 25.20 21.96 46.12 4.26
3690 9007 3.193056 TGTCATCAACTCTCAGAGAGCAG 59.807 47.826 25.20 17.92 46.12 4.24
3691 9008 3.056962 GTGTCATCAACTCTCAGAGAGCA 60.057 47.826 25.20 11.63 46.12 4.26
3692 9009 3.193267 AGTGTCATCAACTCTCAGAGAGC 59.807 47.826 25.20 9.28 46.12 4.09
3693 9010 4.701651 AGAGTGTCATCAACTCTCAGAGAG 59.298 45.833 23.90 23.90 46.38 3.20
3694 9011 4.661222 AGAGTGTCATCAACTCTCAGAGA 58.339 43.478 9.27 0.00 46.38 3.10
3700 9017 5.321102 ACTGTAGAGAGTGTCATCAACTCT 58.679 41.667 5.81 5.81 42.82 3.24
3701 9018 5.637006 ACTGTAGAGAGTGTCATCAACTC 57.363 43.478 0.00 0.00 33.14 3.01
3702 9019 6.412362 AAACTGTAGAGAGTGTCATCAACT 57.588 37.500 0.00 0.00 0.00 3.16
3703 9020 7.371936 AGTAAACTGTAGAGAGTGTCATCAAC 58.628 38.462 0.00 0.00 0.00 3.18
3704 9021 7.526142 AGTAAACTGTAGAGAGTGTCATCAA 57.474 36.000 0.00 0.00 0.00 2.57
3705 9022 7.337184 CCTAGTAAACTGTAGAGAGTGTCATCA 59.663 40.741 0.00 0.00 0.00 3.07
3706 9023 7.553402 TCCTAGTAAACTGTAGAGAGTGTCATC 59.447 40.741 0.00 0.00 0.00 2.92
3707 9024 7.403671 TCCTAGTAAACTGTAGAGAGTGTCAT 58.596 38.462 0.00 0.00 0.00 3.06
3708 9025 6.776744 TCCTAGTAAACTGTAGAGAGTGTCA 58.223 40.000 0.00 0.00 0.00 3.58
3709 9026 7.607223 TCTTCCTAGTAAACTGTAGAGAGTGTC 59.393 40.741 0.00 0.00 0.00 3.67
3710 9027 7.460071 TCTTCCTAGTAAACTGTAGAGAGTGT 58.540 38.462 0.00 0.00 0.00 3.55
3711 9028 7.825270 TCTCTTCCTAGTAAACTGTAGAGAGTG 59.175 40.741 0.00 0.00 0.00 3.51
3712 9029 7.920227 TCTCTTCCTAGTAAACTGTAGAGAGT 58.080 38.462 0.00 0.00 0.00 3.24
3713 9030 8.795842 TTCTCTTCCTAGTAAACTGTAGAGAG 57.204 38.462 0.00 9.92 31.61 3.20
3714 9031 9.584008 TTTTCTCTTCCTAGTAAACTGTAGAGA 57.416 33.333 0.00 0.00 0.00 3.10
3719 9036 9.495572 CTGATTTTTCTCTTCCTAGTAAACTGT 57.504 33.333 0.00 0.00 0.00 3.55
3720 9037 8.940952 CCTGATTTTTCTCTTCCTAGTAAACTG 58.059 37.037 0.00 0.00 0.00 3.16
3721 9038 8.881262 TCCTGATTTTTCTCTTCCTAGTAAACT 58.119 33.333 0.00 0.00 0.00 2.66
3722 9039 9.157104 CTCCTGATTTTTCTCTTCCTAGTAAAC 57.843 37.037 0.00 0.00 0.00 2.01
3723 9040 8.881262 ACTCCTGATTTTTCTCTTCCTAGTAAA 58.119 33.333 0.00 0.00 0.00 2.01
3724 9041 8.437274 ACTCCTGATTTTTCTCTTCCTAGTAA 57.563 34.615 0.00 0.00 0.00 2.24
3725 9042 7.124448 GGACTCCTGATTTTTCTCTTCCTAGTA 59.876 40.741 0.00 0.00 0.00 1.82
3726 9043 6.070481 GGACTCCTGATTTTTCTCTTCCTAGT 60.070 42.308 0.00 0.00 0.00 2.57
3727 9044 6.070538 TGGACTCCTGATTTTTCTCTTCCTAG 60.071 42.308 0.00 0.00 0.00 3.02
3728 9045 5.785423 TGGACTCCTGATTTTTCTCTTCCTA 59.215 40.000 0.00 0.00 0.00 2.94
3729 9046 4.599241 TGGACTCCTGATTTTTCTCTTCCT 59.401 41.667 0.00 0.00 0.00 3.36
3730 9047 4.697828 GTGGACTCCTGATTTTTCTCTTCC 59.302 45.833 0.00 0.00 0.00 3.46
3731 9048 5.308825 TGTGGACTCCTGATTTTTCTCTTC 58.691 41.667 0.00 0.00 0.00 2.87
3732 9049 5.310409 TGTGGACTCCTGATTTTTCTCTT 57.690 39.130 0.00 0.00 0.00 2.85
3733 9050 4.982241 TGTGGACTCCTGATTTTTCTCT 57.018 40.909 0.00 0.00 0.00 3.10
3734 9051 4.397417 CCATGTGGACTCCTGATTTTTCTC 59.603 45.833 0.00 0.00 37.39 2.87
3735 9052 4.043310 TCCATGTGGACTCCTGATTTTTCT 59.957 41.667 0.00 0.00 39.78 2.52
3736 9053 4.335416 TCCATGTGGACTCCTGATTTTTC 58.665 43.478 0.00 0.00 39.78 2.29
3737 9054 4.387026 TCCATGTGGACTCCTGATTTTT 57.613 40.909 0.00 0.00 39.78 1.94
3750 9067 4.021280 TGTTTGAATGTGGAATCCATGTGG 60.021 41.667 4.81 0.00 35.28 4.17
3751 9068 5.136816 TGTTTGAATGTGGAATCCATGTG 57.863 39.130 4.81 0.00 35.28 3.21
3752 9069 5.804944 TTGTTTGAATGTGGAATCCATGT 57.195 34.783 4.81 0.00 35.28 3.21
3753 9070 6.314400 GGATTTGTTTGAATGTGGAATCCATG 59.686 38.462 4.81 0.00 40.30 3.66
3754 9071 6.214005 AGGATTTGTTTGAATGTGGAATCCAT 59.786 34.615 4.81 0.00 42.06 3.41
3755 9072 5.543405 AGGATTTGTTTGAATGTGGAATCCA 59.457 36.000 0.00 0.00 42.06 3.41
3756 9073 6.041423 AGGATTTGTTTGAATGTGGAATCC 57.959 37.500 0.00 0.00 40.68 3.01
3757 9074 8.087750 TGTAAGGATTTGTTTGAATGTGGAATC 58.912 33.333 0.00 0.00 0.00 2.52
3758 9075 7.961351 TGTAAGGATTTGTTTGAATGTGGAAT 58.039 30.769 0.00 0.00 0.00 3.01
3759 9076 7.353414 TGTAAGGATTTGTTTGAATGTGGAA 57.647 32.000 0.00 0.00 0.00 3.53
3760 9077 6.968263 TGTAAGGATTTGTTTGAATGTGGA 57.032 33.333 0.00 0.00 0.00 4.02
3761 9078 7.209475 ACTTGTAAGGATTTGTTTGAATGTGG 58.791 34.615 0.00 0.00 0.00 4.17
3762 9079 9.398170 CTACTTGTAAGGATTTGTTTGAATGTG 57.602 33.333 0.00 0.00 0.00 3.21
3763 9080 8.576442 CCTACTTGTAAGGATTTGTTTGAATGT 58.424 33.333 0.00 0.00 36.08 2.71
3764 9081 8.792633 TCCTACTTGTAAGGATTTGTTTGAATG 58.207 33.333 0.00 0.00 38.24 2.67
3765 9082 8.934023 TCCTACTTGTAAGGATTTGTTTGAAT 57.066 30.769 0.00 0.00 38.24 2.57
3766 9083 8.754991 TTCCTACTTGTAAGGATTTGTTTGAA 57.245 30.769 0.00 0.00 42.69 2.69
3767 9084 8.754991 TTTCCTACTTGTAAGGATTTGTTTGA 57.245 30.769 0.00 0.00 42.69 2.69
3768 9085 9.410556 CATTTCCTACTTGTAAGGATTTGTTTG 57.589 33.333 0.00 0.00 42.69 2.93
3769 9086 9.362151 TCATTTCCTACTTGTAAGGATTTGTTT 57.638 29.630 0.00 0.00 42.69 2.83
3770 9087 8.934023 TCATTTCCTACTTGTAAGGATTTGTT 57.066 30.769 0.00 0.00 42.69 2.83
3771 9088 7.611855 CCTCATTTCCTACTTGTAAGGATTTGT 59.388 37.037 0.00 0.00 42.69 2.83
3772 9089 7.067494 CCCTCATTTCCTACTTGTAAGGATTTG 59.933 40.741 0.00 0.00 42.69 2.32
3773 9090 7.119387 CCCTCATTTCCTACTTGTAAGGATTT 58.881 38.462 0.00 0.00 42.69 2.17
3774 9091 6.663734 CCCTCATTTCCTACTTGTAAGGATT 58.336 40.000 0.00 0.00 42.69 3.01
3775 9092 5.398012 GCCCTCATTTCCTACTTGTAAGGAT 60.398 44.000 0.00 0.00 42.69 3.24
3776 9093 4.080526 GCCCTCATTTCCTACTTGTAAGGA 60.081 45.833 0.00 0.00 41.47 3.36
3777 9094 4.200092 GCCCTCATTTCCTACTTGTAAGG 58.800 47.826 0.00 0.00 35.26 2.69
3778 9095 4.843728 TGCCCTCATTTCCTACTTGTAAG 58.156 43.478 0.00 0.00 0.00 2.34
3779 9096 4.919774 TGCCCTCATTTCCTACTTGTAA 57.080 40.909 0.00 0.00 0.00 2.41
3780 9097 4.843728 CTTGCCCTCATTTCCTACTTGTA 58.156 43.478 0.00 0.00 0.00 2.41
3781 9098 3.690460 CTTGCCCTCATTTCCTACTTGT 58.310 45.455 0.00 0.00 0.00 3.16
3782 9099 2.424956 GCTTGCCCTCATTTCCTACTTG 59.575 50.000 0.00 0.00 0.00 3.16
3783 9100 2.041620 TGCTTGCCCTCATTTCCTACTT 59.958 45.455 0.00 0.00 0.00 2.24
3784 9101 1.635487 TGCTTGCCCTCATTTCCTACT 59.365 47.619 0.00 0.00 0.00 2.57
3785 9102 2.128771 TGCTTGCCCTCATTTCCTAC 57.871 50.000 0.00 0.00 0.00 3.18
3786 9103 2.041620 ACTTGCTTGCCCTCATTTCCTA 59.958 45.455 0.00 0.00 0.00 2.94
3787 9104 1.203100 ACTTGCTTGCCCTCATTTCCT 60.203 47.619 0.00 0.00 0.00 3.36
3788 9105 1.260544 ACTTGCTTGCCCTCATTTCC 58.739 50.000 0.00 0.00 0.00 3.13
3789 9106 4.519540 TTAACTTGCTTGCCCTCATTTC 57.480 40.909 0.00 0.00 0.00 2.17
3790 9107 5.011943 TGAATTAACTTGCTTGCCCTCATTT 59.988 36.000 0.00 0.00 0.00 2.32
3791 9108 4.527816 TGAATTAACTTGCTTGCCCTCATT 59.472 37.500 0.00 0.00 0.00 2.57
3792 9109 4.082026 GTGAATTAACTTGCTTGCCCTCAT 60.082 41.667 0.00 0.00 0.00 2.90
3793 9110 3.255642 GTGAATTAACTTGCTTGCCCTCA 59.744 43.478 0.00 0.00 0.00 3.86
3794 9111 3.367395 GGTGAATTAACTTGCTTGCCCTC 60.367 47.826 0.00 0.00 0.00 4.30
3795 9112 2.562738 GGTGAATTAACTTGCTTGCCCT 59.437 45.455 0.00 0.00 0.00 5.19
3796 9113 2.562738 AGGTGAATTAACTTGCTTGCCC 59.437 45.455 0.00 0.00 0.00 5.36
3797 9114 3.367395 GGAGGTGAATTAACTTGCTTGCC 60.367 47.826 0.00 0.00 0.00 4.52
3798 9115 3.367395 GGGAGGTGAATTAACTTGCTTGC 60.367 47.826 0.00 0.00 0.00 4.01
3799 9116 3.193479 GGGGAGGTGAATTAACTTGCTTG 59.807 47.826 0.00 0.00 0.00 4.01
3800 9117 3.431415 GGGGAGGTGAATTAACTTGCTT 58.569 45.455 0.00 0.00 0.00 3.91
3801 9118 2.291605 GGGGGAGGTGAATTAACTTGCT 60.292 50.000 0.00 0.00 0.00 3.91
3802 9119 2.100197 GGGGGAGGTGAATTAACTTGC 58.900 52.381 0.00 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.