Multiple sequence alignment - TraesCS5B01G173300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G173300 chr5B 100.000 6573 0 0 1 6573 318398897 318392325 0.000000e+00 12139.0
1 TraesCS5B01G173300 chr5A 94.971 2386 94 14 2491 4860 371035994 371038369 0.000000e+00 3718.0
2 TraesCS5B01G173300 chr5A 90.286 1575 81 22 664 2193 371034211 371035758 0.000000e+00 1995.0
3 TraesCS5B01G173300 chr5A 93.657 741 14 9 4858 5576 371038409 371039138 0.000000e+00 1077.0
4 TraesCS5B01G173300 chr5A 90.000 260 25 1 3 261 371033658 371033917 1.060000e-87 335.0
5 TraesCS5B01G173300 chr5A 89.908 109 3 2 2225 2333 371035896 371035996 4.130000e-27 134.0
6 TraesCS5B01G173300 chr5D 94.351 2390 95 22 2492 4858 280778988 280776616 0.000000e+00 3629.0
7 TraesCS5B01G173300 chr5D 88.964 1042 48 21 675 1676 280780950 280779936 0.000000e+00 1225.0
8 TraesCS5B01G173300 chr5D 94.171 772 12 7 4858 5607 280776574 280775814 0.000000e+00 1146.0
9 TraesCS5B01G173300 chr5D 89.864 661 38 11 5939 6573 280775300 280774643 0.000000e+00 822.0
10 TraesCS5B01G173300 chr5D 87.122 629 31 19 1706 2308 280779609 280779005 0.000000e+00 667.0
11 TraesCS5B01G173300 chr5D 88.788 330 15 9 5616 5932 280775671 280775351 1.030000e-102 385.0
12 TraesCS5B01G173300 chr5D 82.069 290 41 5 280 569 280781300 280781022 3.060000e-58 237.0
13 TraesCS5B01G173300 chr2B 95.882 170 6 1 2326 2495 237581405 237581573 2.340000e-69 274.0
14 TraesCS5B01G173300 chr2B 92.737 179 12 1 2324 2502 53410877 53410700 2.350000e-64 257.0
15 TraesCS5B01G173300 chr4B 95.758 165 7 0 2329 2493 407061338 407061174 3.910000e-67 267.0
16 TraesCS5B01G173300 chr7B 94.253 174 9 1 2324 2497 316400939 316400767 1.410000e-66 265.0
17 TraesCS5B01G173300 chr7B 83.908 87 14 0 6411 6497 422911764 422911678 4.220000e-12 84.2
18 TraesCS5B01G173300 chr7A 93.678 174 9 2 2326 2498 727851119 727851291 6.540000e-65 259.0
19 TraesCS5B01G173300 chr7A 91.444 187 13 3 2330 2514 206712120 206711935 3.040000e-63 254.0
20 TraesCS5B01G173300 chr7A 77.143 175 39 1 391 565 197504224 197504051 4.190000e-17 100.0
21 TraesCS5B01G173300 chr7A 83.908 87 13 1 6411 6497 467435321 467435236 1.520000e-11 82.4
22 TraesCS5B01G173300 chr3D 94.545 165 9 0 2329 2493 238999411 238999575 8.460000e-64 255.0
23 TraesCS5B01G173300 chr2A 92.265 181 13 1 2320 2499 460904176 460903996 8.460000e-64 255.0
24 TraesCS5B01G173300 chr1B 91.803 183 11 4 2320 2500 543805931 543806111 1.090000e-62 252.0
25 TraesCS5B01G173300 chr1B 100.000 28 0 0 5753 5780 282128878 282128851 1.200000e-02 52.8
26 TraesCS5B01G173300 chr7D 83.529 85 14 0 6411 6495 408363842 408363758 5.460000e-11 80.5
27 TraesCS5B01G173300 chr7D 91.667 48 3 1 5736 5783 84794261 84794215 1.530000e-06 65.8
28 TraesCS5B01G173300 chr7D 96.875 32 0 1 5753 5784 442305561 442305531 1.200000e-02 52.8
29 TraesCS5B01G173300 chr3A 91.111 45 1 3 5742 5784 57966338 57966295 2.560000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G173300 chr5B 318392325 318398897 6572 True 12139.000000 12139 100.000000 1 6573 1 chr5B.!!$R1 6572
1 TraesCS5B01G173300 chr5A 371033658 371039138 5480 False 1451.800000 3718 91.764400 3 5576 5 chr5A.!!$F1 5573
2 TraesCS5B01G173300 chr5D 280774643 280781300 6657 True 1158.714286 3629 89.332714 280 6573 7 chr5D.!!$R1 6293

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
877 920 0.245539 TTGATCCCACGAACGTCTCC 59.754 55.000 0.00 0.0 0.00 3.71 F
1458 1507 0.179073 CTAGTGATGGTTGGCGGAGG 60.179 60.000 0.00 0.0 0.00 4.30 F
1477 1526 1.202521 GGTGTGGGTTTTGCTCCAAAG 60.203 52.381 0.00 0.0 34.72 2.77 F
2902 3417 1.264288 CAAAGGAAGACAGTGGTTCGC 59.736 52.381 0.00 0.0 0.00 4.70 F
3148 3663 1.798223 CGGACAAAGCGTGAATCTGAA 59.202 47.619 0.00 0.0 0.00 3.02 F
3976 4495 2.119832 AGCCACACCGGACCTACT 59.880 61.111 9.46 0.0 36.56 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2716 3231 1.345741 TGGAACCTGCTTGTCAGAGAG 59.654 52.381 0.00 0.0 45.72 3.20 R
3128 3643 1.428448 TCAGATTCACGCTTTGTCCG 58.572 50.000 0.00 0.0 0.00 4.79 R
3169 3684 4.756642 CAGATGTAACAACATCACACCTGT 59.243 41.667 17.99 0.0 46.52 4.00 R
4114 4641 0.244721 GCCAGGTGTTTCCAAGCATC 59.755 55.000 0.00 0.0 39.02 3.91 R
4190 4718 1.542328 GGTACATGTGTCACAGCCACA 60.542 52.381 12.03 0.0 46.03 4.17 R
5659 6394 1.388837 ATTTTCATTACGCCCGGCCC 61.389 55.000 3.10 0.0 0.00 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.568760 GGCTATCAACAGTTCTACTTGCTC 59.431 45.833 0.00 0.00 0.00 4.26
30 31 3.113260 ACAGTTCTACTTGCTCCACAC 57.887 47.619 0.00 0.00 0.00 3.82
40 41 2.738521 CTCCACACGTTGCTCCCG 60.739 66.667 0.00 0.00 0.00 5.14
47 48 0.948623 CACGTTGCTCCCGTCAATGA 60.949 55.000 0.00 0.00 36.17 2.57
57 59 1.340991 CCCGTCAATGACCCCTTCAAT 60.341 52.381 7.91 0.00 37.92 2.57
61 63 3.081804 GTCAATGACCCCTTCAATCGTT 58.918 45.455 1.10 0.00 37.92 3.85
81 83 1.931635 AGACCTTCTCTCGGCTCTTT 58.068 50.000 0.00 0.00 0.00 2.52
93 95 2.705658 TCGGCTCTTTGGTATCCATGAT 59.294 45.455 0.00 0.00 31.53 2.45
94 96 3.070018 CGGCTCTTTGGTATCCATGATC 58.930 50.000 0.00 0.00 31.53 2.92
96 98 3.244215 GGCTCTTTGGTATCCATGATCGA 60.244 47.826 0.00 0.00 31.53 3.59
97 99 3.743396 GCTCTTTGGTATCCATGATCGAC 59.257 47.826 0.00 0.00 31.53 4.20
98 100 3.977427 TCTTTGGTATCCATGATCGACG 58.023 45.455 0.00 0.00 31.53 5.12
122 124 7.498933 CGAATTCGTATCAGGAGAATCATGCA 61.499 42.308 19.67 0.00 39.74 3.96
179 181 4.651503 TCTTTGGATTGGTTGCCTTGTTTA 59.348 37.500 0.00 0.00 0.00 2.01
185 187 3.967203 TGGTTGCCTTGTTTACGTTAC 57.033 42.857 0.00 0.00 0.00 2.50
196 198 4.493547 TGTTTACGTTACCATTACCGGAG 58.506 43.478 9.46 0.00 0.00 4.63
212 214 3.251487 ACCGGAGATAACCAAACAAAACG 59.749 43.478 9.46 0.00 0.00 3.60
214 216 3.365565 CGGAGATAACCAAACAAAACGGG 60.366 47.826 0.00 0.00 0.00 5.28
241 243 4.708177 AGTCTCACTACAGTTGCAATGTT 58.292 39.130 16.19 1.78 32.02 2.71
242 244 4.512944 AGTCTCACTACAGTTGCAATGTTG 59.487 41.667 16.19 16.01 32.02 3.33
252 254 5.299028 ACAGTTGCAATGTTGTGTATTCTCA 59.701 36.000 0.59 0.00 0.00 3.27
255 257 7.482743 CAGTTGCAATGTTGTGTATTCTCATAC 59.517 37.037 0.59 0.00 36.52 2.39
261 263 8.826710 CAATGTTGTGTATTCTCATACCGTTAT 58.173 33.333 0.00 0.00 35.25 1.89
264 266 8.201464 TGTTGTGTATTCTCATACCGTTATCAT 58.799 33.333 0.00 0.00 35.25 2.45
265 267 8.700644 GTTGTGTATTCTCATACCGTTATCATC 58.299 37.037 0.00 0.00 35.25 2.92
266 268 8.178313 TGTGTATTCTCATACCGTTATCATCT 57.822 34.615 0.00 0.00 35.25 2.90
267 269 9.292195 TGTGTATTCTCATACCGTTATCATCTA 57.708 33.333 0.00 0.00 35.25 1.98
268 270 9.557338 GTGTATTCTCATACCGTTATCATCTAC 57.443 37.037 0.00 0.00 35.25 2.59
269 271 8.448615 TGTATTCTCATACCGTTATCATCTACG 58.551 37.037 0.00 0.00 35.25 3.51
270 272 6.872628 TTCTCATACCGTTATCATCTACGT 57.127 37.500 0.00 0.00 36.09 3.57
271 273 6.872628 TCTCATACCGTTATCATCTACGTT 57.127 37.500 0.00 0.00 36.09 3.99
272 274 7.967890 TCTCATACCGTTATCATCTACGTTA 57.032 36.000 0.00 0.00 36.09 3.18
273 275 8.382030 TCTCATACCGTTATCATCTACGTTAA 57.618 34.615 0.00 0.00 36.09 2.01
274 276 8.285394 TCTCATACCGTTATCATCTACGTTAAC 58.715 37.037 0.00 0.00 36.09 2.01
275 277 7.071414 TCATACCGTTATCATCTACGTTAACG 58.929 38.462 25.68 25.68 43.84 3.18
278 280 5.535842 CGTTATCATCTACGTTAACGGTG 57.464 43.478 29.81 21.16 41.76 4.94
289 291 2.465097 TTAACGGTGCAATGCGGTGC 62.465 55.000 0.00 4.53 45.15 5.01
305 307 4.035091 TGCGGTGCATTCTCATATTGTTAC 59.965 41.667 0.00 0.00 31.71 2.50
309 311 6.566564 CGGTGCATTCTCATATTGTTACCATC 60.567 42.308 0.00 0.00 0.00 3.51
332 334 1.267532 CGTTAATGATGCACGAGCCAC 60.268 52.381 1.39 0.00 41.13 5.01
338 340 0.457853 GATGCACGAGCCACGAACTA 60.458 55.000 1.39 0.00 45.77 2.24
341 343 0.666577 GCACGAGCCACGAACTAAGT 60.667 55.000 7.86 0.00 45.77 2.24
399 401 0.606604 GCACCGAGGTTCAAGTCCTA 59.393 55.000 0.00 0.00 35.20 2.94
407 409 5.472137 CCGAGGTTCAAGTCCTAAATTTGAA 59.528 40.000 0.00 0.00 38.20 2.69
409 411 7.309194 CCGAGGTTCAAGTCCTAAATTTGAAAT 60.309 37.037 0.00 0.00 41.06 2.17
413 415 7.095229 GGTTCAAGTCCTAAATTTGAAATTGGC 60.095 37.037 3.62 0.00 41.06 4.52
419 421 1.708822 AATTTGAAATTGGCGGTCGC 58.291 45.000 6.83 6.83 41.06 5.19
420 422 0.600557 ATTTGAAATTGGCGGTCGCA 59.399 45.000 17.21 0.00 44.11 5.10
422 424 0.600557 TTGAAATTGGCGGTCGCATT 59.399 45.000 17.21 6.41 44.11 3.56
423 425 1.454201 TGAAATTGGCGGTCGCATTA 58.546 45.000 17.21 2.04 44.11 1.90
427 429 3.518634 AATTGGCGGTCGCATTATTTT 57.481 38.095 17.21 0.00 44.11 1.82
450 452 8.970859 TTTTGAATTTATTTCAGGCCTTTTGA 57.029 26.923 0.00 0.00 44.90 2.69
456 458 3.598019 TTTCAGGCCTTTTGATGATGC 57.402 42.857 0.00 0.00 0.00 3.91
457 459 2.219080 TCAGGCCTTTTGATGATGCA 57.781 45.000 0.00 0.00 0.00 3.96
462 464 3.262405 AGGCCTTTTGATGATGCACATTT 59.738 39.130 0.00 0.00 39.56 2.32
492 495 4.580995 AGGAGATGTTCTCGTCGATTATGT 59.419 41.667 0.00 0.00 44.28 2.29
493 496 4.912766 GGAGATGTTCTCGTCGATTATGTC 59.087 45.833 0.00 0.00 44.28 3.06
500 503 1.266786 CGTCGATTATGTCGCCGTCC 61.267 60.000 0.00 0.00 45.56 4.79
532 535 3.371898 TCGTCAATGTCAAGATGATGTGC 59.628 43.478 0.00 0.00 33.02 4.57
534 537 3.441222 GTCAATGTCAAGATGATGTGCCA 59.559 43.478 0.00 0.00 0.00 4.92
544 547 1.560505 TGATGTGCCAGCTCAGTCTA 58.439 50.000 0.65 0.00 0.00 2.59
554 557 4.511527 CCAGCTCAGTCTATCAAATGTGT 58.488 43.478 0.00 0.00 0.00 3.72
556 559 5.413833 CCAGCTCAGTCTATCAAATGTGTTT 59.586 40.000 0.00 0.00 0.00 2.83
561 564 9.534565 GCTCAGTCTATCAAATGTGTTTATAGA 57.465 33.333 0.00 0.00 0.00 1.98
569 572 5.121611 TCAAATGTGTTTATAGAGGTGTGCG 59.878 40.000 0.00 0.00 0.00 5.34
570 573 2.343101 TGTGTTTATAGAGGTGTGCGC 58.657 47.619 0.00 0.00 0.00 6.09
571 574 2.289133 TGTGTTTATAGAGGTGTGCGCA 60.289 45.455 5.66 5.66 0.00 6.09
572 575 2.093783 GTGTTTATAGAGGTGTGCGCAC 59.906 50.000 33.11 33.11 44.53 5.34
573 576 2.289133 TGTTTATAGAGGTGTGCGCACA 60.289 45.455 37.86 37.86 46.95 4.57
580 583 1.942657 GAGGTGTGCGCACATTCATAT 59.057 47.619 42.22 24.84 46.95 1.78
646 660 1.658114 GGGCGAACCAAACACTTCC 59.342 57.895 0.00 0.00 39.85 3.46
647 661 0.822121 GGGCGAACCAAACACTTCCT 60.822 55.000 0.00 0.00 39.85 3.36
648 662 0.591659 GGCGAACCAAACACTTCCTC 59.408 55.000 0.00 0.00 35.26 3.71
649 663 0.591659 GCGAACCAAACACTTCCTCC 59.408 55.000 0.00 0.00 0.00 4.30
650 664 1.235724 CGAACCAAACACTTCCTCCC 58.764 55.000 0.00 0.00 0.00 4.30
651 665 1.476110 CGAACCAAACACTTCCTCCCA 60.476 52.381 0.00 0.00 0.00 4.37
652 666 2.814097 CGAACCAAACACTTCCTCCCAT 60.814 50.000 0.00 0.00 0.00 4.00
653 667 2.292828 ACCAAACACTTCCTCCCATG 57.707 50.000 0.00 0.00 0.00 3.66
654 668 0.890683 CCAAACACTTCCTCCCATGC 59.109 55.000 0.00 0.00 0.00 4.06
655 669 1.619654 CAAACACTTCCTCCCATGCA 58.380 50.000 0.00 0.00 0.00 3.96
656 670 1.962807 CAAACACTTCCTCCCATGCAA 59.037 47.619 0.00 0.00 0.00 4.08
657 671 2.364970 CAAACACTTCCTCCCATGCAAA 59.635 45.455 0.00 0.00 0.00 3.68
658 672 1.620822 ACACTTCCTCCCATGCAAAC 58.379 50.000 0.00 0.00 0.00 2.93
659 673 1.133513 ACACTTCCTCCCATGCAAACA 60.134 47.619 0.00 0.00 0.00 2.83
660 674 1.962807 CACTTCCTCCCATGCAAACAA 59.037 47.619 0.00 0.00 0.00 2.83
661 675 2.364970 CACTTCCTCCCATGCAAACAAA 59.635 45.455 0.00 0.00 0.00 2.83
662 676 3.037549 ACTTCCTCCCATGCAAACAAAA 58.962 40.909 0.00 0.00 0.00 2.44
688 727 6.451064 ACCAAACACTTCCTCAAAGTAAAG 57.549 37.500 0.00 0.00 46.69 1.85
698 737 9.569122 ACTTCCTCAAAGTAAAGTGCTAATAAA 57.431 29.630 0.00 0.00 46.55 1.40
775 816 2.279582 AAAGATACGACGTCAGCTGG 57.720 50.000 17.16 0.36 0.00 4.85
868 911 1.068474 GACGACAAGTTGATCCCACG 58.932 55.000 10.54 7.62 0.00 4.94
875 918 0.966920 AGTTGATCCCACGAACGTCT 59.033 50.000 0.00 0.00 0.00 4.18
877 920 0.245539 TTGATCCCACGAACGTCTCC 59.754 55.000 0.00 0.00 0.00 3.71
931 974 2.430694 CCTGTCTCGGGATGTATTCACA 59.569 50.000 0.00 0.00 39.52 3.58
975 1018 2.066999 CCCTAGGCGCTCTTCCCTT 61.067 63.158 7.64 0.00 32.65 3.95
1301 1349 3.748568 GGTTTGAGCTTCGATGTTCTTCT 59.251 43.478 14.63 0.00 0.00 2.85
1307 1355 4.489810 AGCTTCGATGTTCTTCTAGTGTG 58.510 43.478 0.00 0.00 0.00 3.82
1335 1383 2.760374 GCATCTCGTAGGGGATTTCTG 58.240 52.381 0.00 0.00 0.00 3.02
1358 1406 5.163141 TGGAATTTTTAGGATGCGGAGGATA 60.163 40.000 0.00 0.00 40.04 2.59
1453 1502 5.241728 GGATTTATTCCTAGTGATGGTTGGC 59.758 44.000 0.00 0.00 41.78 4.52
1458 1507 0.179073 CTAGTGATGGTTGGCGGAGG 60.179 60.000 0.00 0.00 0.00 4.30
1477 1526 1.202521 GGTGTGGGTTTTGCTCCAAAG 60.203 52.381 0.00 0.00 34.72 2.77
1487 1536 2.335712 GCTCCAAAGCGAGGTTGGG 61.336 63.158 11.02 2.13 44.82 4.12
1526 1575 9.553064 CATAAGATCATGCTAAGTCTAGGTTTT 57.447 33.333 0.00 0.00 0.00 2.43
1555 1621 7.004086 GGAGTGTTGGGATTTTGGATATGATA 58.996 38.462 0.00 0.00 0.00 2.15
1676 1759 7.808856 GGACCTAACTTCTACTATTAGAATGCG 59.191 40.741 3.27 0.00 42.35 4.73
1679 1762 7.815068 CCTAACTTCTACTATTAGAATGCGCAT 59.185 37.037 19.28 19.28 42.35 4.73
1737 2118 9.817809 CCAGTTATCATGTACTTGTACTTATGT 57.182 33.333 11.53 3.51 0.00 2.29
1765 2146 5.521735 CAGTAGTATGATGTGCTTCCTTGTC 59.478 44.000 0.00 0.00 0.00 3.18
1770 2151 3.141398 TGATGTGCTTCCTTGTCAGAAC 58.859 45.455 0.00 0.00 0.00 3.01
1776 2157 4.005650 TGCTTCCTTGTCAGAACATGATC 58.994 43.478 0.00 0.00 40.92 2.92
1824 2205 9.206870 CTGGTTTGTGCATTGTTAGAAATTAAT 57.793 29.630 0.00 0.00 0.00 1.40
1871 2257 9.797556 GTCCATAATTCACCAAAGGTAATAAAC 57.202 33.333 0.00 0.00 32.11 2.01
1880 2266 8.047911 TCACCAAAGGTAATAAACGGATTATCA 58.952 33.333 0.00 0.00 30.55 2.15
1922 2327 4.250116 TGATTGCACGCCAGTAAATTTT 57.750 36.364 0.00 0.00 0.00 1.82
1923 2328 3.986572 TGATTGCACGCCAGTAAATTTTG 59.013 39.130 0.00 0.00 0.00 2.44
1959 2364 5.594926 AGTCTGAAACAAAGCCAAAGAATG 58.405 37.500 0.00 0.00 0.00 2.67
2051 2456 8.613482 GGAATAAGAAACTAGGCTGATGTAAAC 58.387 37.037 0.00 0.00 0.00 2.01
2060 2465 2.479049 GGCTGATGTAAACATGCAGCAG 60.479 50.000 28.41 19.00 46.72 4.24
2062 2467 1.473677 TGATGTAAACATGCAGCAGCC 59.526 47.619 0.00 0.00 41.13 4.85
2080 2485 4.260579 GCAGCCACCACAAACAAATTTAAC 60.261 41.667 0.00 0.00 0.00 2.01
2086 2491 5.234116 CACCACAAACAAATTTAACCTGCTC 59.766 40.000 0.00 0.00 0.00 4.26
2087 2492 5.128663 ACCACAAACAAATTTAACCTGCTCT 59.871 36.000 0.00 0.00 0.00 4.09
2088 2493 5.463061 CCACAAACAAATTTAACCTGCTCTG 59.537 40.000 0.00 0.00 0.00 3.35
2089 2494 5.049828 ACAAACAAATTTAACCTGCTCTGC 58.950 37.500 0.00 0.00 0.00 4.26
2090 2495 5.163416 ACAAACAAATTTAACCTGCTCTGCT 60.163 36.000 0.00 0.00 0.00 4.24
2091 2496 4.773323 ACAAATTTAACCTGCTCTGCTC 57.227 40.909 0.00 0.00 0.00 4.26
2092 2497 4.401925 ACAAATTTAACCTGCTCTGCTCT 58.598 39.130 0.00 0.00 0.00 4.09
2093 2498 4.457257 ACAAATTTAACCTGCTCTGCTCTC 59.543 41.667 0.00 0.00 0.00 3.20
2094 2499 3.988976 ATTTAACCTGCTCTGCTCTCA 57.011 42.857 0.00 0.00 0.00 3.27
2095 2500 3.769739 TTTAACCTGCTCTGCTCTCAA 57.230 42.857 0.00 0.00 0.00 3.02
2096 2501 3.325293 TTAACCTGCTCTGCTCTCAAG 57.675 47.619 0.00 0.00 0.00 3.02
2123 2528 2.546373 GCCAGAGATCTCTCAGCATGTC 60.546 54.545 27.95 6.15 45.21 3.06
2137 2542 3.980238 GCATGTCGCTATGTATACTGC 57.020 47.619 4.17 5.38 37.77 4.40
2179 2585 1.346062 TCTTTCAGGCTGCTCACTCT 58.654 50.000 10.34 0.00 0.00 3.24
2217 2623 1.488393 CTGGTTTCTCCTCCCCATCTC 59.512 57.143 0.00 0.00 37.07 2.75
2231 2743 6.296836 CCTCCCCATCTCATTATGAATGATCA 60.297 42.308 14.40 0.00 46.10 2.92
2273 2785 8.643324 ACAGCTAGTCGAAATCCTAATCTTTAT 58.357 33.333 0.00 0.00 0.00 1.40
2307 2819 5.278660 GCTGTGATGGTTTTGTTCTCAGAAT 60.279 40.000 0.00 0.00 34.51 2.40
2308 2820 6.713762 TGTGATGGTTTTGTTCTCAGAATT 57.286 33.333 0.00 0.00 0.00 2.17
2309 2821 6.738114 TGTGATGGTTTTGTTCTCAGAATTC 58.262 36.000 0.00 0.00 0.00 2.17
2310 2822 6.320926 TGTGATGGTTTTGTTCTCAGAATTCA 59.679 34.615 8.44 0.00 0.00 2.57
2311 2823 7.014518 TGTGATGGTTTTGTTCTCAGAATTCAT 59.985 33.333 8.44 0.00 0.00 2.57
2312 2824 7.327761 GTGATGGTTTTGTTCTCAGAATTCATG 59.672 37.037 8.44 3.57 0.00 3.07
2313 2825 6.713762 TGGTTTTGTTCTCAGAATTCATGT 57.286 33.333 8.44 0.00 0.00 3.21
2331 2843 9.851686 AATTCATGTTGGACTATGTACATATGT 57.148 29.630 15.81 13.93 29.43 2.29
2344 2856 5.526506 GTACATATGTACTCCCTCCGTTT 57.473 43.478 30.41 0.00 45.47 3.60
2345 2857 4.667519 ACATATGTACTCCCTCCGTTTC 57.332 45.455 6.56 0.00 0.00 2.78
2346 2858 4.287552 ACATATGTACTCCCTCCGTTTCT 58.712 43.478 6.56 0.00 0.00 2.52
2347 2859 5.452255 ACATATGTACTCCCTCCGTTTCTA 58.548 41.667 6.56 0.00 0.00 2.10
2348 2860 5.895534 ACATATGTACTCCCTCCGTTTCTAA 59.104 40.000 6.56 0.00 0.00 2.10
2349 2861 6.381994 ACATATGTACTCCCTCCGTTTCTAAA 59.618 38.462 6.56 0.00 0.00 1.85
2350 2862 5.952347 ATGTACTCCCTCCGTTTCTAAAT 57.048 39.130 0.00 0.00 0.00 1.40
2351 2863 8.582437 CATATGTACTCCCTCCGTTTCTAAATA 58.418 37.037 0.00 0.00 0.00 1.40
2352 2864 7.613551 ATGTACTCCCTCCGTTTCTAAATAT 57.386 36.000 0.00 0.00 0.00 1.28
2353 2865 8.716674 ATGTACTCCCTCCGTTTCTAAATATA 57.283 34.615 0.00 0.00 0.00 0.86
2354 2866 8.537728 TGTACTCCCTCCGTTTCTAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
2355 2867 8.636213 TGTACTCCCTCCGTTTCTAAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
2356 2868 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
2357 2869 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
2358 2870 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
2359 2871 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
2360 2872 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
2361 2873 8.827677 CCCTCCGTTTCTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 0.00 2.77
2362 2874 8.827677 CCTCCGTTTCTAAATATAAGTCTTTGG 58.172 37.037 0.00 0.00 0.00 3.28
2363 2875 9.595823 CTCCGTTTCTAAATATAAGTCTTTGGA 57.404 33.333 0.00 0.00 0.00 3.53
2364 2876 9.595823 TCCGTTTCTAAATATAAGTCTTTGGAG 57.404 33.333 0.00 0.00 0.00 3.86
2365 2877 9.595823 CCGTTTCTAAATATAAGTCTTTGGAGA 57.404 33.333 0.00 0.00 0.00 3.71
2383 2895 4.698575 GGAGAGATTCCACTATGAACCAC 58.301 47.826 0.00 0.00 46.01 4.16
2384 2896 4.162320 GGAGAGATTCCACTATGAACCACA 59.838 45.833 0.00 0.00 46.01 4.17
2385 2897 5.163258 GGAGAGATTCCACTATGAACCACAT 60.163 44.000 0.00 0.00 46.01 3.21
2386 2898 6.042093 GGAGAGATTCCACTATGAACCACATA 59.958 42.308 0.00 0.00 46.01 2.29
2387 2899 6.821388 AGAGATTCCACTATGAACCACATAC 58.179 40.000 0.00 0.00 40.07 2.39
2388 2900 5.601662 AGATTCCACTATGAACCACATACG 58.398 41.667 0.00 0.00 40.07 3.06
2389 2901 3.812156 TCCACTATGAACCACATACGG 57.188 47.619 0.00 0.00 40.07 4.02
2390 2902 3.367321 TCCACTATGAACCACATACGGA 58.633 45.455 0.00 0.00 40.07 4.69
2391 2903 3.964688 TCCACTATGAACCACATACGGAT 59.035 43.478 0.00 0.00 40.07 4.18
2392 2904 4.058124 CCACTATGAACCACATACGGATG 58.942 47.826 5.94 5.94 40.07 3.51
2394 2906 5.221362 CCACTATGAACCACATACGGATGTA 60.221 44.000 14.23 0.00 44.82 2.29
2395 2907 6.455647 CACTATGAACCACATACGGATGTAT 58.544 40.000 14.23 5.54 44.82 2.29
2408 2920 5.474578 ACGGATGTATGTAGATGCATTCT 57.525 39.130 0.00 2.14 35.26 2.40
2409 2921 6.590234 ACGGATGTATGTAGATGCATTCTA 57.410 37.500 0.00 1.10 35.26 2.10
2410 2922 6.625362 ACGGATGTATGTAGATGCATTCTAG 58.375 40.000 0.00 1.10 37.62 2.43
2411 2923 6.434340 ACGGATGTATGTAGATGCATTCTAGA 59.566 38.462 0.00 3.20 37.62 2.43
2412 2924 6.971756 CGGATGTATGTAGATGCATTCTAGAG 59.028 42.308 0.00 0.00 37.62 2.43
2413 2925 7.362487 CGGATGTATGTAGATGCATTCTAGAGT 60.362 40.741 0.00 0.00 37.62 3.24
2414 2926 7.758980 GGATGTATGTAGATGCATTCTAGAGTG 59.241 40.741 10.74 10.74 37.62 3.51
2415 2927 7.588497 TGTATGTAGATGCATTCTAGAGTGT 57.412 36.000 15.79 0.00 37.62 3.55
2416 2928 8.691661 TGTATGTAGATGCATTCTAGAGTGTA 57.308 34.615 15.79 12.27 37.62 2.90
2417 2929 8.787852 TGTATGTAGATGCATTCTAGAGTGTAG 58.212 37.037 15.79 0.00 37.62 2.74
2418 2930 9.004717 GTATGTAGATGCATTCTAGAGTGTAGA 57.995 37.037 15.79 0.00 37.62 2.59
2419 2931 8.648698 ATGTAGATGCATTCTAGAGTGTAGAT 57.351 34.615 15.79 7.49 37.62 1.98
2420 2932 8.470657 TGTAGATGCATTCTAGAGTGTAGATT 57.529 34.615 15.79 5.09 37.62 2.40
2421 2933 8.572185 TGTAGATGCATTCTAGAGTGTAGATTC 58.428 37.037 15.79 7.10 37.62 2.52
2422 2934 7.594351 AGATGCATTCTAGAGTGTAGATTCA 57.406 36.000 15.79 5.48 30.96 2.57
2423 2935 7.432869 AGATGCATTCTAGAGTGTAGATTCAC 58.567 38.462 15.79 0.00 34.19 3.18
2424 2936 7.287466 AGATGCATTCTAGAGTGTAGATTCACT 59.713 37.037 15.79 0.00 41.03 3.41
2434 2946 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2435 2947 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2436 2948 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2437 2949 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2438 2950 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2439 2951 4.872691 AGATTCACTCATTTTGCTCCGTAG 59.127 41.667 0.00 0.00 0.00 3.51
2458 2970 6.636562 CGTAGGTAGTCCATAGTGAAATCT 57.363 41.667 0.00 0.00 35.89 2.40
2459 2971 6.670233 CGTAGGTAGTCCATAGTGAAATCTC 58.330 44.000 0.00 0.00 35.89 2.75
2460 2972 6.487331 CGTAGGTAGTCCATAGTGAAATCTCT 59.513 42.308 0.00 0.00 35.89 3.10
2461 2973 7.660617 CGTAGGTAGTCCATAGTGAAATCTCTA 59.339 40.741 0.00 0.00 35.89 2.43
2462 2974 7.826918 AGGTAGTCCATAGTGAAATCTCTAC 57.173 40.000 0.00 0.00 35.89 2.59
2463 2975 7.355101 AGGTAGTCCATAGTGAAATCTCTACA 58.645 38.462 0.00 0.00 35.89 2.74
2464 2976 7.839705 AGGTAGTCCATAGTGAAATCTCTACAA 59.160 37.037 0.00 0.00 35.89 2.41
2465 2977 8.475639 GGTAGTCCATAGTGAAATCTCTACAAA 58.524 37.037 0.00 0.00 0.00 2.83
2466 2978 9.522804 GTAGTCCATAGTGAAATCTCTACAAAG 57.477 37.037 0.00 0.00 0.00 2.77
2467 2979 8.367660 AGTCCATAGTGAAATCTCTACAAAGA 57.632 34.615 0.00 0.00 0.00 2.52
2468 2980 8.254508 AGTCCATAGTGAAATCTCTACAAAGAC 58.745 37.037 0.00 0.00 0.00 3.01
2469 2981 8.254508 GTCCATAGTGAAATCTCTACAAAGACT 58.745 37.037 0.00 0.00 0.00 3.24
2470 2982 8.816894 TCCATAGTGAAATCTCTACAAAGACTT 58.183 33.333 0.00 0.00 0.00 3.01
2483 2995 9.680315 CTCTACAAAGACTTATATTTAGGGACG 57.320 37.037 0.00 0.00 0.00 4.79
2484 2996 8.636213 TCTACAAAGACTTATATTTAGGGACGG 58.364 37.037 0.00 0.00 0.00 4.79
2485 2997 7.427989 ACAAAGACTTATATTTAGGGACGGA 57.572 36.000 0.00 0.00 0.00 4.69
2486 2998 7.498443 ACAAAGACTTATATTTAGGGACGGAG 58.502 38.462 0.00 0.00 0.00 4.63
2487 2999 6.667558 AAGACTTATATTTAGGGACGGAGG 57.332 41.667 0.00 0.00 0.00 4.30
2488 3000 5.085219 AGACTTATATTTAGGGACGGAGGG 58.915 45.833 0.00 0.00 0.00 4.30
2489 3001 5.082425 GACTTATATTTAGGGACGGAGGGA 58.918 45.833 0.00 0.00 0.00 4.20
2490 3002 5.085219 ACTTATATTTAGGGACGGAGGGAG 58.915 45.833 0.00 0.00 0.00 4.30
2593 3106 4.569966 GTCTGTAGGCACATGATCTCTTTG 59.430 45.833 0.00 0.00 33.14 2.77
2617 3130 8.197592 TGTTACTTTCACTTAATGGGAGACTA 57.802 34.615 0.00 0.00 0.00 2.59
2646 3161 7.925043 TTTGGTTTAGATAACGCCTGAATTA 57.075 32.000 0.00 0.00 0.00 1.40
2647 3162 8.514330 TTTGGTTTAGATAACGCCTGAATTAT 57.486 30.769 0.00 0.00 0.00 1.28
2690 3205 4.638304 TGGGCTGTTTCTGTTTCTACTAC 58.362 43.478 0.00 0.00 0.00 2.73
2691 3206 4.347000 TGGGCTGTTTCTGTTTCTACTACT 59.653 41.667 0.00 0.00 0.00 2.57
2693 3208 5.763698 GGGCTGTTTCTGTTTCTACTACTTT 59.236 40.000 0.00 0.00 0.00 2.66
2694 3209 6.262496 GGGCTGTTTCTGTTTCTACTACTTTT 59.738 38.462 0.00 0.00 0.00 2.27
2805 3320 5.635120 AGGTTTGGCTTTTCATCTTCTACT 58.365 37.500 0.00 0.00 0.00 2.57
2902 3417 1.264288 CAAAGGAAGACAGTGGTTCGC 59.736 52.381 0.00 0.00 0.00 4.70
2968 3483 4.009675 GGTGATGAACTAAATGACCTGCA 58.990 43.478 0.00 0.00 29.54 4.41
3128 3643 4.632688 CAGAAATGGAAAATGTCATTGCCC 59.367 41.667 12.70 10.74 34.28 5.36
3148 3663 1.798223 CGGACAAAGCGTGAATCTGAA 59.202 47.619 0.00 0.00 0.00 3.02
3151 3666 4.613622 CGGACAAAGCGTGAATCTGAAAAT 60.614 41.667 0.00 0.00 0.00 1.82
3204 3719 7.424803 TGTTGTTACATCTGATTTCTGGTTTG 58.575 34.615 0.00 0.00 0.00 2.93
3407 3922 2.952978 AGATTCTAGTGGAGCTGTACCG 59.047 50.000 0.00 0.00 0.00 4.02
3455 3970 5.764686 TGTTGACATGACTGATAAGCAACTT 59.235 36.000 0.00 0.00 36.34 2.66
3475 3990 7.361286 GCAACTTGGAGAGGTACTTTTTCTATG 60.361 40.741 0.00 0.00 41.55 2.23
3485 4000 7.394816 AGGTACTTTTTCTATGTAGTGCATGT 58.605 34.615 3.69 0.00 34.26 3.21
3563 4079 9.313118 GAATTTTGTCCTACTTTTCATTTGTGT 57.687 29.630 0.00 0.00 0.00 3.72
3564 4080 9.665719 AATTTTGTCCTACTTTTCATTTGTGTT 57.334 25.926 0.00 0.00 0.00 3.32
3615 4131 7.143340 CACATTGCTTTCTGGGTGATAATATG 58.857 38.462 0.00 0.00 0.00 1.78
3616 4132 5.772825 TTGCTTTCTGGGTGATAATATGC 57.227 39.130 0.00 0.00 0.00 3.14
3618 4134 4.141181 TGCTTTCTGGGTGATAATATGCCT 60.141 41.667 0.00 0.00 0.00 4.75
3628 4147 6.295292 GGGTGATAATATGCCTTTGGGATTTC 60.295 42.308 0.00 0.00 34.92 2.17
3680 4199 2.357075 GGAGTCGAAAGGTTTGATCCC 58.643 52.381 0.00 0.00 0.00 3.85
3797 4316 9.722184 AAGGTATGTATCATCATCAAGATTCTG 57.278 33.333 0.00 0.00 33.72 3.02
3820 4339 7.556275 TCTGATATGTATGTTTTTCCCTGTTCC 59.444 37.037 0.00 0.00 0.00 3.62
3865 4384 7.657761 GGTTCTTAGAGTTCTTGAGTTTGATCA 59.342 37.037 0.00 0.00 0.00 2.92
3976 4495 2.119832 AGCCACACCGGACCTACT 59.880 61.111 9.46 0.00 36.56 2.57
3985 4505 2.683867 CACCGGACCTACTGTCTAGAAG 59.316 54.545 9.46 0.00 43.89 2.85
3990 4510 5.124645 CGGACCTACTGTCTAGAAGTATGT 58.875 45.833 15.75 15.75 43.89 2.29
4000 4520 9.915629 ACTGTCTAGAAGTATGTTCTTTTGTAG 57.084 33.333 0.00 0.00 0.00 2.74
4021 4547 5.108187 AGTCATTGTAGATGGTCATGCTT 57.892 39.130 0.00 0.00 0.00 3.91
4022 4548 6.239217 AGTCATTGTAGATGGTCATGCTTA 57.761 37.500 0.00 0.00 0.00 3.09
4096 4623 9.499479 AATCAGAGTATTTCGATTGCATAGAAT 57.501 29.630 0.00 0.00 32.06 2.40
4114 4641 8.366666 GCATAGAATAAGCGTAAAGAATAGTCG 58.633 37.037 0.00 0.00 0.00 4.18
4157 4684 2.372172 AGTTACTGGCTACTGGCTTTGT 59.628 45.455 0.00 0.00 41.46 2.83
4166 4693 5.105310 TGGCTACTGGCTTTGTTTTGTAAAA 60.105 36.000 0.00 0.00 41.46 1.52
4211 4739 0.320334 TGGCTGTGACACATGTACCG 60.320 55.000 9.11 0.00 0.00 4.02
4212 4740 0.320421 GGCTGTGACACATGTACCGT 60.320 55.000 9.11 0.00 0.00 4.83
4213 4741 1.068474 GCTGTGACACATGTACCGTC 58.932 55.000 9.11 2.65 0.00 4.79
4253 4784 9.123902 TGTTTTGACATTATATCTCCATGGAAG 57.876 33.333 17.00 10.18 0.00 3.46
4296 4830 6.148480 ACTTCTGAAGTAATGTCTGATTGCAC 59.852 38.462 20.85 0.00 40.69 4.57
4332 4866 7.900782 ACAACCTACATGTGTAGTTAATGTC 57.099 36.000 9.11 0.00 44.88 3.06
4341 4875 8.349983 ACATGTGTAGTTAATGTCAAACCTTTC 58.650 33.333 0.00 0.00 28.38 2.62
4349 4884 4.701956 ATGTCAAACCTTTCTATTGCCG 57.298 40.909 0.00 0.00 0.00 5.69
4362 4897 1.392589 ATTGCCGTATTCCCTGCTTG 58.607 50.000 0.00 0.00 0.00 4.01
4474 5010 4.126437 TGATATACGGATTTGCACTGTGG 58.874 43.478 10.21 0.00 0.00 4.17
4535 5071 6.094048 AGTTGCAGCATAAATCGATTAGTTGT 59.906 34.615 11.83 0.00 0.00 3.32
4536 5072 7.279981 AGTTGCAGCATAAATCGATTAGTTGTA 59.720 33.333 11.83 9.40 0.00 2.41
4537 5073 7.728847 TGCAGCATAAATCGATTAGTTGTAT 57.271 32.000 11.83 2.28 0.00 2.29
4538 5074 7.796838 TGCAGCATAAATCGATTAGTTGTATC 58.203 34.615 11.83 2.20 0.00 2.24
4539 5075 7.657354 TGCAGCATAAATCGATTAGTTGTATCT 59.343 33.333 11.83 2.91 0.00 1.98
4540 5076 8.499162 GCAGCATAAATCGATTAGTTGTATCTT 58.501 33.333 11.83 0.00 0.00 2.40
4541 5077 9.803130 CAGCATAAATCGATTAGTTGTATCTTG 57.197 33.333 11.83 2.73 0.00 3.02
4604 5140 2.008242 TAACTTGGCATTGTTGGGCT 57.992 45.000 14.09 0.00 0.00 5.19
4633 5169 7.174413 TCTTTGATTCAACCATCTATTGTGGA 58.826 34.615 0.00 0.00 39.12 4.02
4663 5199 0.987294 ATATCATGCCCCTCCTTCCG 59.013 55.000 0.00 0.00 0.00 4.30
4674 5210 1.067071 CCTCCTTCCGTGTAGGTTGTC 60.067 57.143 0.00 0.00 41.99 3.18
4713 5249 2.742589 CAGCCGTTCCCTTTTAGACTTC 59.257 50.000 0.00 0.00 0.00 3.01
4779 5315 1.352083 ACTCTGTGTGCACCTATGGT 58.648 50.000 15.69 5.24 35.62 3.55
4804 5340 4.910195 TCTGCACAACACTAGAAATCCAT 58.090 39.130 0.00 0.00 0.00 3.41
4913 5491 3.497332 AGCTGTACTCCAGTAGTCACAA 58.503 45.455 0.00 0.00 43.55 3.33
4940 5518 5.202765 TGGGCTATTTTCATGTGTCATGAT 58.797 37.500 12.22 2.38 0.00 2.45
5031 5610 1.135527 TGCAGCCTGAAATTATGCAGC 59.864 47.619 0.00 0.00 41.65 5.25
5144 5723 1.188863 ATGGTTTGAGATTGGCTGGC 58.811 50.000 0.00 0.00 0.00 4.85
5145 5724 0.112995 TGGTTTGAGATTGGCTGGCT 59.887 50.000 2.00 0.00 0.00 4.75
5146 5725 0.529378 GGTTTGAGATTGGCTGGCTG 59.471 55.000 2.00 0.00 0.00 4.85
5147 5726 1.538047 GTTTGAGATTGGCTGGCTGA 58.462 50.000 2.00 0.00 0.00 4.26
5193 5773 2.224161 CGGCAAAATTCTGTTTTCCCCA 60.224 45.455 0.00 0.00 0.00 4.96
5332 5912 2.834549 TGAGGAGAAATCAGGTGGAGAC 59.165 50.000 0.00 0.00 0.00 3.36
5344 5924 9.981460 AAATCAGGTGGAGACTAGATTAAAATT 57.019 29.630 0.00 0.00 30.49 1.82
5558 6159 6.885922 GGGCTTTGAGACCTTAATAAGAGTA 58.114 40.000 0.83 0.00 41.45 2.59
5610 6211 5.921962 AAAAAGTGAATTAGGGCATCTCC 57.078 39.130 0.00 0.00 0.00 3.71
5611 6212 4.591321 AAAGTGAATTAGGGCATCTCCA 57.409 40.909 0.00 0.00 36.21 3.86
5612 6213 4.591321 AAGTGAATTAGGGCATCTCCAA 57.409 40.909 0.00 0.00 36.21 3.53
5620 6355 3.130734 AGGGCATCTCCAAGGTAAGTA 57.869 47.619 0.00 0.00 36.21 2.24
5655 6390 1.739466 CCAAATGACCGTGGACATCTG 59.261 52.381 4.38 1.42 37.03 2.90
5656 6391 1.739466 CAAATGACCGTGGACATCTGG 59.261 52.381 4.38 0.00 30.91 3.86
5657 6392 0.392998 AATGACCGTGGACATCTGGC 60.393 55.000 4.38 0.00 30.91 4.85
5658 6393 2.125106 GACCGTGGACATCTGGCC 60.125 66.667 0.00 0.00 45.93 5.36
5675 6410 4.841861 CGGGCCGGGCGTAATGAA 62.842 66.667 23.19 0.00 0.00 2.57
5798 6533 9.868277 AGTTCAAAATTTTCACACATGTTCTAA 57.132 25.926 0.00 0.00 0.00 2.10
5848 6591 7.095607 GCTTCGTTAGATTATGTTGGGTATGAG 60.096 40.741 0.00 0.00 0.00 2.90
5869 6612 4.005650 AGTTGCTCGATTGTGAATGATGT 58.994 39.130 0.00 0.00 0.00 3.06
5870 6613 5.178061 AGTTGCTCGATTGTGAATGATGTA 58.822 37.500 0.00 0.00 0.00 2.29
5871 6614 5.063944 AGTTGCTCGATTGTGAATGATGTAC 59.936 40.000 0.00 0.00 0.00 2.90
5872 6615 4.758688 TGCTCGATTGTGAATGATGTACT 58.241 39.130 0.00 0.00 0.00 2.73
5874 6617 6.337356 TGCTCGATTGTGAATGATGTACTTA 58.663 36.000 0.00 0.00 0.00 2.24
5875 6618 6.816140 TGCTCGATTGTGAATGATGTACTTAA 59.184 34.615 0.00 0.00 0.00 1.85
5889 6637 7.644490 TGATGTACTTAAATTGTTCAAACGCT 58.356 30.769 0.00 0.00 0.00 5.07
5890 6638 7.589587 TGATGTACTTAAATTGTTCAAACGCTG 59.410 33.333 0.00 0.00 0.00 5.18
5891 6639 5.683743 TGTACTTAAATTGTTCAAACGCTGC 59.316 36.000 0.00 0.00 0.00 5.25
5935 6683 9.874205 ACAATCCATATGTTTAAAATGAACAGG 57.126 29.630 1.24 0.00 40.04 4.00
6008 6803 8.344098 CAAAATGAACAACTTGGCAAACATAAT 58.656 29.630 0.00 0.00 0.00 1.28
6010 6805 5.537188 TGAACAACTTGGCAAACATAATCC 58.463 37.500 0.00 0.00 0.00 3.01
6012 6807 5.391312 ACAACTTGGCAAACATAATCCTC 57.609 39.130 0.00 0.00 0.00 3.71
6038 6833 8.791605 CATATTTCATAATTATGTCGTGCATGC 58.208 33.333 21.89 11.82 38.47 4.06
6056 6852 6.248420 GTGCATGCTAATACAACTACAAAACG 59.752 38.462 20.33 0.00 0.00 3.60
6059 6855 6.715344 TGCTAATACAACTACAAAACGGAG 57.285 37.500 0.00 0.00 0.00 4.63
6081 6877 1.888512 TGAAGCACTTGAAATGCCCTC 59.111 47.619 0.00 0.00 44.53 4.30
6082 6878 1.888512 GAAGCACTTGAAATGCCCTCA 59.111 47.619 0.00 0.00 44.53 3.86
6086 6882 1.068055 CACTTGAAATGCCCTCACTGC 60.068 52.381 0.00 0.00 0.00 4.40
6094 6890 1.751927 GCCCTCACTGCATTCCCTG 60.752 63.158 0.00 0.00 0.00 4.45
6122 6918 6.500684 TCTTTTTATCTAGCAGCAAAGTGG 57.499 37.500 0.00 0.00 0.00 4.00
6162 6958 3.399330 TCGGAGATCAAAGGTTGTTCAC 58.601 45.455 0.00 0.00 32.98 3.18
6169 6965 1.608590 CAAAGGTTGTTCACGGAGCAT 59.391 47.619 0.00 0.00 0.00 3.79
6227 7024 3.308530 CATCGATCTATAGTTGCACGCA 58.691 45.455 0.00 0.00 0.00 5.24
6228 7025 3.000082 TCGATCTATAGTTGCACGCAG 58.000 47.619 0.00 0.00 0.00 5.18
6237 7034 2.250939 TTGCACGCAGGAGTTTCGG 61.251 57.895 0.00 0.00 0.00 4.30
6241 7038 3.121030 CGCAGGAGTTTCGGCTGG 61.121 66.667 0.00 0.00 0.00 4.85
6246 7043 1.207089 CAGGAGTTTCGGCTGGACATA 59.793 52.381 0.00 0.00 0.00 2.29
6257 7054 2.352715 GGCTGGACATAACCTTGCAAAC 60.353 50.000 0.00 0.00 34.12 2.93
6302 7099 3.084039 TGATGTCATTTTGAGACCCTGC 58.916 45.455 0.00 0.00 35.15 4.85
6306 7103 1.820519 TCATTTTGAGACCCTGCATGC 59.179 47.619 11.82 11.82 0.00 4.06
6321 7118 4.418392 CTGCATGCCAATGAAAAGAGTAC 58.582 43.478 16.68 0.00 35.67 2.73
6331 7128 7.523709 GCCAATGAAAAGAGTACCAAATTCAGA 60.524 37.037 7.52 0.00 31.14 3.27
6346 7143 3.490439 TTCAGAGGTCTTGTGATGCAA 57.510 42.857 0.00 0.00 35.50 4.08
6410 7207 2.614057 CTCGTATTGCCCTTGTTGATCC 59.386 50.000 0.00 0.00 0.00 3.36
6418 7236 3.523157 TGCCCTTGTTGATCCAATCTAGA 59.477 43.478 0.00 0.00 0.00 2.43
6453 7271 5.510430 ACCTGAAAACCCTATTGATTCTCC 58.490 41.667 0.00 0.00 0.00 3.71
6513 7331 2.885616 TCTCAAGTACTCCGGTCCTTT 58.114 47.619 0.00 0.00 0.00 3.11
6527 7345 2.515901 CTTTGGGCCCCCTATCGG 59.484 66.667 22.27 0.00 36.94 4.18
6545 7363 3.461773 CCTCCGCGGGTGACTCAT 61.462 66.667 27.83 0.00 0.00 2.90
6552 7370 2.990479 GGGTGACTCATCGGCCTT 59.010 61.111 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.331168 GCAAGTAGAACTGTTGATAGCCAG 59.669 45.833 0.00 0.00 34.82 4.85
1 2 4.020218 AGCAAGTAGAACTGTTGATAGCCA 60.020 41.667 0.00 0.00 0.00 4.75
2 3 4.508662 AGCAAGTAGAACTGTTGATAGCC 58.491 43.478 0.00 0.00 0.00 3.93
3 4 4.568760 GGAGCAAGTAGAACTGTTGATAGC 59.431 45.833 0.00 0.00 0.00 2.97
4 5 5.578727 GTGGAGCAAGTAGAACTGTTGATAG 59.421 44.000 0.00 0.00 0.00 2.08
5 6 5.011635 TGTGGAGCAAGTAGAACTGTTGATA 59.988 40.000 0.00 0.00 0.00 2.15
19 20 1.571460 GAGCAACGTGTGGAGCAAG 59.429 57.895 0.00 0.00 0.00 4.01
25 26 3.041940 GACGGGAGCAACGTGTGG 61.042 66.667 5.10 0.00 45.68 4.17
30 31 1.635663 GGTCATTGACGGGAGCAACG 61.636 60.000 10.56 0.00 32.65 4.10
40 41 2.711542 ACGATTGAAGGGGTCATTGAC 58.288 47.619 8.34 8.34 35.70 3.18
47 48 2.547990 AGGTCTAACGATTGAAGGGGT 58.452 47.619 0.00 0.00 0.00 4.95
57 59 1.093159 GCCGAGAGAAGGTCTAACGA 58.907 55.000 0.00 0.00 34.71 3.85
61 63 2.755655 CAAAGAGCCGAGAGAAGGTCTA 59.244 50.000 0.00 0.00 34.71 2.59
81 83 4.556233 GAATTCGTCGATCATGGATACCA 58.444 43.478 0.00 0.00 38.19 3.25
97 99 5.164012 GCATGATTCTCCTGATACGAATTCG 60.164 44.000 25.64 25.64 46.33 3.34
98 100 5.698089 TGCATGATTCTCCTGATACGAATTC 59.302 40.000 0.00 0.00 0.00 2.17
122 124 0.611714 CTACAACTAGGGGTGGCGTT 59.388 55.000 0.00 0.00 0.00 4.84
155 157 3.242011 ACAAGGCAACCAATCCAAAGAT 58.758 40.909 0.00 0.00 37.17 2.40
179 181 4.202151 GGTTATCTCCGGTAATGGTAACGT 60.202 45.833 0.00 0.00 38.85 3.99
185 187 4.519213 TGTTTGGTTATCTCCGGTAATGG 58.481 43.478 0.00 0.00 0.00 3.16
196 198 3.372660 TGCCCGTTTTGTTTGGTTATC 57.627 42.857 0.00 0.00 0.00 1.75
212 214 4.184629 CAACTGTAGTGAGACTATTGCCC 58.815 47.826 0.00 0.00 32.65 5.36
214 216 4.245660 TGCAACTGTAGTGAGACTATTGC 58.754 43.478 11.21 11.21 41.23 3.56
241 243 8.178313 AGATGATAACGGTATGAGAATACACA 57.822 34.615 0.00 0.00 0.00 3.72
242 244 9.557338 GTAGATGATAACGGTATGAGAATACAC 57.443 37.037 0.00 0.00 0.00 2.90
261 263 3.300852 TTGCACCGTTAACGTAGATGA 57.699 42.857 25.15 5.34 37.74 2.92
264 266 1.727880 GCATTGCACCGTTAACGTAGA 59.272 47.619 25.15 8.03 37.74 2.59
265 267 1.526184 CGCATTGCACCGTTAACGTAG 60.526 52.381 25.15 17.75 37.74 3.51
266 268 0.439214 CGCATTGCACCGTTAACGTA 59.561 50.000 25.15 7.25 37.74 3.57
267 269 1.205568 CGCATTGCACCGTTAACGT 59.794 52.632 25.15 11.62 37.74 3.99
268 270 1.511043 CCGCATTGCACCGTTAACG 60.511 57.895 20.99 20.99 39.44 3.18
269 271 0.727793 CACCGCATTGCACCGTTAAC 60.728 55.000 9.69 0.00 0.00 2.01
270 272 1.576920 CACCGCATTGCACCGTTAA 59.423 52.632 9.69 0.00 0.00 2.01
271 273 2.972144 GCACCGCATTGCACCGTTA 61.972 57.895 9.69 0.00 42.49 3.18
272 274 4.341502 GCACCGCATTGCACCGTT 62.342 61.111 9.69 0.00 42.49 4.44
300 302 8.832668 CGTGCATCATTAACGTAGATGGTAACA 61.833 40.741 16.71 8.02 41.17 2.41
305 307 4.048504 TCGTGCATCATTAACGTAGATGG 58.951 43.478 16.71 5.88 39.53 3.51
309 311 2.218759 GGCTCGTGCATCATTAACGTAG 59.781 50.000 12.07 0.00 41.91 3.51
318 320 2.027073 GTTCGTGGCTCGTGCATCA 61.027 57.895 12.07 0.00 41.91 3.07
320 322 0.037697 TTAGTTCGTGGCTCGTGCAT 60.038 50.000 12.07 0.00 41.91 3.96
399 401 2.065512 GCGACCGCCAATTTCAAATTT 58.934 42.857 2.55 0.00 34.56 1.82
407 409 3.518634 AAAATAATGCGACCGCCAATT 57.481 38.095 12.08 8.33 41.09 2.32
409 411 2.229062 TCAAAAATAATGCGACCGCCAA 59.771 40.909 12.08 0.00 41.09 4.52
413 415 9.618410 GAAATAAATTCAAAAATAATGCGACCG 57.382 29.630 0.00 0.00 37.99 4.79
448 450 5.104817 TCCTCTCACTAAATGTGCATCATCA 60.105 40.000 0.00 0.00 45.81 3.07
450 452 5.129980 TCTCCTCTCACTAAATGTGCATCAT 59.870 40.000 0.00 0.00 45.81 2.45
456 458 6.756074 GAGAACATCTCCTCTCACTAAATGTG 59.244 42.308 0.00 0.00 41.39 3.21
457 459 6.405286 CGAGAACATCTCCTCTCACTAAATGT 60.405 42.308 1.98 0.00 40.34 2.71
462 464 4.193090 GACGAGAACATCTCCTCTCACTA 58.807 47.826 1.98 0.00 40.34 2.74
487 490 2.182284 CCACGGACGGCGACATAA 59.818 61.111 16.62 0.00 0.00 1.90
500 503 1.344837 CATTGACGATGTCGCCACG 59.655 57.895 1.77 0.00 44.43 4.94
518 521 1.669779 GAGCTGGCACATCATCTTGAC 59.330 52.381 0.00 0.00 38.20 3.18
532 535 4.511527 ACACATTTGATAGACTGAGCTGG 58.488 43.478 0.00 0.00 0.00 4.85
534 537 9.539825 CTATAAACACATTTGATAGACTGAGCT 57.460 33.333 0.00 0.00 0.00 4.09
544 547 6.183360 CGCACACCTCTATAAACACATTTGAT 60.183 38.462 0.00 0.00 0.00 2.57
554 557 2.753055 TGTGCGCACACCTCTATAAA 57.247 45.000 37.86 12.61 46.86 1.40
556 559 2.167487 TGAATGTGCGCACACCTCTATA 59.833 45.455 42.74 22.98 46.86 1.31
561 564 1.672363 CATATGAATGTGCGCACACCT 59.328 47.619 42.74 32.25 46.86 4.00
604 607 2.190325 TTTTTAACACGCAACACCCG 57.810 45.000 0.00 0.00 0.00 5.28
625 639 1.388837 AAGTGTTTGGTTCGCCCACC 61.389 55.000 0.00 0.00 45.19 4.61
627 641 1.104577 GGAAGTGTTTGGTTCGCCCA 61.105 55.000 0.00 0.00 43.27 5.36
629 643 0.591659 GAGGAAGTGTTTGGTTCGCC 59.408 55.000 0.00 0.00 37.92 5.54
631 645 1.235724 GGGAGGAAGTGTTTGGTTCG 58.764 55.000 0.00 0.00 0.00 3.95
632 646 2.358322 TGGGAGGAAGTGTTTGGTTC 57.642 50.000 0.00 0.00 0.00 3.62
633 647 2.597455 CATGGGAGGAAGTGTTTGGTT 58.403 47.619 0.00 0.00 0.00 3.67
634 648 1.823250 GCATGGGAGGAAGTGTTTGGT 60.823 52.381 0.00 0.00 0.00 3.67
635 649 0.890683 GCATGGGAGGAAGTGTTTGG 59.109 55.000 0.00 0.00 0.00 3.28
636 650 1.619654 TGCATGGGAGGAAGTGTTTG 58.380 50.000 0.00 0.00 0.00 2.93
637 651 2.365293 GTTTGCATGGGAGGAAGTGTTT 59.635 45.455 0.00 0.00 0.00 2.83
638 652 1.963515 GTTTGCATGGGAGGAAGTGTT 59.036 47.619 0.00 0.00 0.00 3.32
639 653 1.133513 TGTTTGCATGGGAGGAAGTGT 60.134 47.619 0.00 0.00 0.00 3.55
640 654 1.619654 TGTTTGCATGGGAGGAAGTG 58.380 50.000 0.00 0.00 0.00 3.16
641 655 2.380064 TTGTTTGCATGGGAGGAAGT 57.620 45.000 0.00 0.00 0.00 3.01
642 656 3.321682 TCTTTTGTTTGCATGGGAGGAAG 59.678 43.478 0.00 0.00 0.00 3.46
643 657 3.303938 TCTTTTGTTTGCATGGGAGGAA 58.696 40.909 0.00 0.00 0.00 3.36
644 658 2.956132 TCTTTTGTTTGCATGGGAGGA 58.044 42.857 0.00 0.00 0.00 3.71
645 659 3.392882 GTTCTTTTGTTTGCATGGGAGG 58.607 45.455 0.00 0.00 0.00 4.30
646 660 3.181467 TGGTTCTTTTGTTTGCATGGGAG 60.181 43.478 0.00 0.00 0.00 4.30
647 661 2.768527 TGGTTCTTTTGTTTGCATGGGA 59.231 40.909 0.00 0.00 0.00 4.37
648 662 3.191078 TGGTTCTTTTGTTTGCATGGG 57.809 42.857 0.00 0.00 0.00 4.00
649 663 4.394300 TGTTTGGTTCTTTTGTTTGCATGG 59.606 37.500 0.00 0.00 0.00 3.66
650 664 5.122082 AGTGTTTGGTTCTTTTGTTTGCATG 59.878 36.000 0.00 0.00 0.00 4.06
651 665 5.244755 AGTGTTTGGTTCTTTTGTTTGCAT 58.755 33.333 0.00 0.00 0.00 3.96
652 666 4.636249 AGTGTTTGGTTCTTTTGTTTGCA 58.364 34.783 0.00 0.00 0.00 4.08
653 667 5.390461 GGAAGTGTTTGGTTCTTTTGTTTGC 60.390 40.000 0.00 0.00 0.00 3.68
654 668 5.931724 AGGAAGTGTTTGGTTCTTTTGTTTG 59.068 36.000 0.00 0.00 0.00 2.93
655 669 6.109156 AGGAAGTGTTTGGTTCTTTTGTTT 57.891 33.333 0.00 0.00 0.00 2.83
656 670 5.245075 TGAGGAAGTGTTTGGTTCTTTTGTT 59.755 36.000 0.00 0.00 0.00 2.83
657 671 4.770010 TGAGGAAGTGTTTGGTTCTTTTGT 59.230 37.500 0.00 0.00 0.00 2.83
658 672 5.323371 TGAGGAAGTGTTTGGTTCTTTTG 57.677 39.130 0.00 0.00 0.00 2.44
659 673 5.993748 TTGAGGAAGTGTTTGGTTCTTTT 57.006 34.783 0.00 0.00 0.00 2.27
660 674 5.480422 ACTTTGAGGAAGTGTTTGGTTCTTT 59.520 36.000 0.00 0.00 46.66 2.52
661 675 5.016831 ACTTTGAGGAAGTGTTTGGTTCTT 58.983 37.500 0.00 0.00 46.66 2.52
662 676 4.600062 ACTTTGAGGAAGTGTTTGGTTCT 58.400 39.130 0.00 0.00 46.66 3.01
775 816 4.881850 TCTTGAGAACAAACAGAAGGGTTC 59.118 41.667 0.00 0.00 39.83 3.62
868 911 3.454375 TGTGTCTTTTGAGGAGACGTTC 58.546 45.455 0.00 0.00 45.05 3.95
875 918 4.105697 AGGGGTATTTGTGTCTTTTGAGGA 59.894 41.667 0.00 0.00 0.00 3.71
877 920 4.321230 GCAGGGGTATTTGTGTCTTTTGAG 60.321 45.833 0.00 0.00 0.00 3.02
1301 1349 0.973632 AGATGCGACCCAACACACTA 59.026 50.000 0.00 0.00 0.00 2.74
1307 1355 0.527817 CCTACGAGATGCGACCCAAC 60.528 60.000 0.00 0.00 44.57 3.77
1335 1383 3.551846 TCCTCCGCATCCTAAAAATTCC 58.448 45.455 0.00 0.00 0.00 3.01
1358 1406 3.790437 CACCGAGCCTGGATGCCT 61.790 66.667 0.00 0.00 0.00 4.75
1453 1502 1.515521 GAGCAAAACCCACACCTCCG 61.516 60.000 0.00 0.00 0.00 4.63
1458 1507 2.223537 CTTTGGAGCAAAACCCACAC 57.776 50.000 0.00 0.00 32.75 3.82
1477 1526 0.966179 AATCCAAAACCCAACCTCGC 59.034 50.000 0.00 0.00 0.00 5.03
1487 1536 6.634436 GCATGATCTTATGACGAATCCAAAAC 59.366 38.462 0.00 0.00 0.00 2.43
1526 1575 0.178975 AAAATCCCAACACTCCGCCA 60.179 50.000 0.00 0.00 0.00 5.69
1555 1621 6.153000 ACACTCGGAAACATAACTCATAGACT 59.847 38.462 0.00 0.00 0.00 3.24
1652 1734 7.146648 GCGCATTCTAATAGTAGAAGTTAGGT 58.853 38.462 16.86 0.00 46.91 3.08
1697 1780 7.293299 ACATGATAACTGGGATTCTGGAATCTA 59.707 37.037 18.80 10.28 44.90 1.98
1737 2118 4.442052 GGAAGCACATCATACTACTGCAGA 60.442 45.833 23.35 2.95 0.00 4.26
1765 2146 8.205131 TGACACAATATTCAGATCATGTTCTG 57.795 34.615 22.63 22.63 43.70 3.02
1776 2157 8.950210 ACCAGAGTTAATTGACACAATATTCAG 58.050 33.333 2.93 0.00 0.00 3.02
1824 2205 6.069905 TGGACTCAAATTAGTTGTAGGCCATA 60.070 38.462 5.01 0.00 42.69 2.74
1841 2226 5.640147 ACCTTTGGTGAATTATGGACTCAA 58.360 37.500 0.00 0.00 32.98 3.02
1871 2257 6.691508 TCATCCTGTTAGACATGATAATCCG 58.308 40.000 0.00 0.00 32.82 4.18
1898 2303 5.574891 AATTTACTGGCGTGCAATCATTA 57.425 34.783 0.00 0.00 0.00 1.90
1922 2327 5.111989 GTTTCAGACTATCTAGCATGTGCA 58.888 41.667 7.83 0.00 45.16 4.57
1923 2328 5.111989 TGTTTCAGACTATCTAGCATGTGC 58.888 41.667 0.00 0.00 42.49 4.57
1959 2364 7.123247 CCCAATAACCCAAGATATGATGGATTC 59.877 40.741 5.17 0.00 0.00 2.52
1980 2385 8.946085 CGATAGCATAAACATATACAACCCAAT 58.054 33.333 0.00 0.00 0.00 3.16
2051 2456 2.089887 TTTGTGGTGGCTGCTGCATG 62.090 55.000 17.89 0.00 41.91 4.06
2060 2465 4.272261 CAGGTTAAATTTGTTTGTGGTGGC 59.728 41.667 0.00 0.00 0.00 5.01
2062 2467 5.115480 AGCAGGTTAAATTTGTTTGTGGTG 58.885 37.500 0.00 0.00 0.00 4.17
2088 2493 5.618654 ATCTCTGGCAGATGCTTGAGAGC 62.619 52.174 19.11 0.00 44.77 4.09
2089 2494 1.481363 TCTCTGGCAGATGCTTGAGAG 59.519 52.381 19.11 17.59 40.89 3.20
2090 2495 1.565067 TCTCTGGCAGATGCTTGAGA 58.435 50.000 19.11 18.80 42.19 3.27
2091 2496 2.103432 AGATCTCTGGCAGATGCTTGAG 59.897 50.000 19.11 15.98 42.48 3.02
2092 2497 2.102757 GAGATCTCTGGCAGATGCTTGA 59.897 50.000 19.11 11.73 42.48 3.02
2093 2498 2.103432 AGAGATCTCTGGCAGATGCTTG 59.897 50.000 24.56 5.98 42.48 4.01
2094 2499 2.366266 GAGAGATCTCTGGCAGATGCTT 59.634 50.000 29.81 4.54 42.48 3.91
2095 2500 1.965643 GAGAGATCTCTGGCAGATGCT 59.034 52.381 29.81 14.88 42.48 3.79
2096 2501 1.687660 TGAGAGATCTCTGGCAGATGC 59.312 52.381 29.81 12.80 42.48 3.91
2137 2542 5.707242 TGCTCTACCAAGATATAAGACCG 57.293 43.478 0.00 0.00 0.00 4.79
2138 2543 7.475137 AGATGCTCTACCAAGATATAAGACC 57.525 40.000 0.00 0.00 0.00 3.85
2166 2572 1.670590 GTCACAGAGTGAGCAGCCT 59.329 57.895 0.00 0.00 43.57 4.58
2273 2785 7.109501 ACAAAACCATCACAGCATATGTAGTA 58.890 34.615 4.29 0.00 41.41 1.82
2280 2792 5.069318 TGAGAACAAAACCATCACAGCATA 58.931 37.500 0.00 0.00 0.00 3.14
2331 2843 8.773033 ACTTATATTTAGAAACGGAGGGAGTA 57.227 34.615 0.00 0.00 0.00 2.59
2332 2844 7.564292 AGACTTATATTTAGAAACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
2333 2845 7.953752 AGACTTATATTTAGAAACGGAGGGAG 58.046 38.462 0.00 0.00 0.00 4.30
2334 2846 7.909485 AGACTTATATTTAGAAACGGAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
2335 2847 8.827677 CAAAGACTTATATTTAGAAACGGAGGG 58.172 37.037 0.00 0.00 0.00 4.30
2336 2848 8.827677 CCAAAGACTTATATTTAGAAACGGAGG 58.172 37.037 0.00 0.00 0.00 4.30
2337 2849 9.595823 TCCAAAGACTTATATTTAGAAACGGAG 57.404 33.333 0.00 0.00 0.00 4.63
2338 2850 9.595823 CTCCAAAGACTTATATTTAGAAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2339 2851 9.595823 TCTCCAAAGACTTATATTTAGAAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2359 2871 8.954344 ATGTGGTTCATAGTGGAATCTCTCCAA 61.954 40.741 0.00 0.00 44.66 3.53
2360 2872 7.548782 ATGTGGTTCATAGTGGAATCTCTCCA 61.549 42.308 0.00 0.00 42.66 3.86
2361 2873 4.162320 TGTGGTTCATAGTGGAATCTCTCC 59.838 45.833 0.00 0.00 45.64 3.71
2362 2874 5.344743 TGTGGTTCATAGTGGAATCTCTC 57.655 43.478 0.00 0.00 0.00 3.20
2363 2875 5.965033 ATGTGGTTCATAGTGGAATCTCT 57.035 39.130 0.00 0.00 34.67 3.10
2364 2876 5.692204 CGTATGTGGTTCATAGTGGAATCTC 59.308 44.000 0.00 0.00 39.36 2.75
2365 2877 5.453339 CCGTATGTGGTTCATAGTGGAATCT 60.453 44.000 0.00 0.00 39.36 2.40
2366 2878 4.750098 CCGTATGTGGTTCATAGTGGAATC 59.250 45.833 0.00 0.00 39.36 2.52
2367 2879 4.407621 TCCGTATGTGGTTCATAGTGGAAT 59.592 41.667 0.00 0.00 39.60 3.01
2368 2880 3.770388 TCCGTATGTGGTTCATAGTGGAA 59.230 43.478 0.00 0.00 39.60 3.53
2369 2881 3.367321 TCCGTATGTGGTTCATAGTGGA 58.633 45.455 0.00 0.00 39.94 4.02
2370 2882 3.812156 TCCGTATGTGGTTCATAGTGG 57.188 47.619 0.00 0.00 39.36 4.00
2371 2883 4.693283 ACATCCGTATGTGGTTCATAGTG 58.307 43.478 0.00 0.00 44.79 2.74
2372 2884 6.455647 CATACATCCGTATGTGGTTCATAGT 58.544 40.000 3.56 0.00 46.70 2.12
2373 2885 6.951256 CATACATCCGTATGTGGTTCATAG 57.049 41.667 3.56 0.00 46.70 2.23
2384 2896 7.175347 AGAATGCATCTACATACATCCGTAT 57.825 36.000 0.00 0.00 36.20 3.06
2385 2897 6.590234 AGAATGCATCTACATACATCCGTA 57.410 37.500 0.00 0.00 36.32 4.02
2386 2898 5.474578 AGAATGCATCTACATACATCCGT 57.525 39.130 0.00 0.00 36.32 4.69
2387 2899 6.856895 TCTAGAATGCATCTACATACATCCG 58.143 40.000 0.00 0.00 39.71 4.18
2388 2900 7.758980 CACTCTAGAATGCATCTACATACATCC 59.241 40.741 0.00 0.00 39.71 3.51
2389 2901 8.303156 ACACTCTAGAATGCATCTACATACATC 58.697 37.037 0.00 0.00 39.71 3.06
2390 2902 8.187913 ACACTCTAGAATGCATCTACATACAT 57.812 34.615 0.00 0.00 39.71 2.29
2391 2903 7.588497 ACACTCTAGAATGCATCTACATACA 57.412 36.000 0.00 0.00 39.71 2.29
2392 2904 9.004717 TCTACACTCTAGAATGCATCTACATAC 57.995 37.037 0.00 0.00 39.71 2.39
2393 2905 9.746457 ATCTACACTCTAGAATGCATCTACATA 57.254 33.333 0.00 0.00 39.71 2.29
2394 2906 8.648698 ATCTACACTCTAGAATGCATCTACAT 57.351 34.615 0.00 0.00 39.71 2.29
2395 2907 8.470657 AATCTACACTCTAGAATGCATCTACA 57.529 34.615 0.00 0.00 39.71 2.74
2396 2908 8.572185 TGAATCTACACTCTAGAATGCATCTAC 58.428 37.037 0.00 0.00 39.71 2.59
2397 2909 8.572185 GTGAATCTACACTCTAGAATGCATCTA 58.428 37.037 0.00 2.77 37.41 1.98
2398 2910 7.287466 AGTGAATCTACACTCTAGAATGCATCT 59.713 37.037 0.00 1.57 46.36 2.90
2399 2911 7.432869 AGTGAATCTACACTCTAGAATGCATC 58.567 38.462 0.00 0.00 46.36 3.91
2400 2912 7.358770 AGTGAATCTACACTCTAGAATGCAT 57.641 36.000 0.01 0.00 46.36 3.96
2401 2913 6.782082 AGTGAATCTACACTCTAGAATGCA 57.218 37.500 0.01 0.00 46.36 3.96
2412 2924 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2413 2925 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2414 2926 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2415 2927 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2416 2928 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2417 2929 4.034510 CCTACGGAGCAAAATGAGTGAATC 59.965 45.833 0.00 0.00 0.00 2.52
2418 2930 3.941483 CCTACGGAGCAAAATGAGTGAAT 59.059 43.478 0.00 0.00 0.00 2.57
2419 2931 3.244422 ACCTACGGAGCAAAATGAGTGAA 60.244 43.478 0.00 0.00 0.00 3.18
2420 2932 2.301870 ACCTACGGAGCAAAATGAGTGA 59.698 45.455 0.00 0.00 0.00 3.41
2421 2933 2.699954 ACCTACGGAGCAAAATGAGTG 58.300 47.619 0.00 0.00 0.00 3.51
2422 2934 3.514309 ACTACCTACGGAGCAAAATGAGT 59.486 43.478 0.00 0.00 0.00 3.41
2423 2935 4.113354 GACTACCTACGGAGCAAAATGAG 58.887 47.826 0.00 0.00 0.00 2.90
2424 2936 3.118884 GGACTACCTACGGAGCAAAATGA 60.119 47.826 0.00 0.00 0.00 2.57
2425 2937 3.195661 GGACTACCTACGGAGCAAAATG 58.804 50.000 0.00 0.00 0.00 2.32
2426 2938 2.835764 TGGACTACCTACGGAGCAAAAT 59.164 45.455 0.00 0.00 37.04 1.82
2427 2939 2.250031 TGGACTACCTACGGAGCAAAA 58.750 47.619 0.00 0.00 37.04 2.44
2428 2940 1.927487 TGGACTACCTACGGAGCAAA 58.073 50.000 0.00 0.00 37.04 3.68
2429 2941 2.154567 ATGGACTACCTACGGAGCAA 57.845 50.000 0.00 0.00 37.04 3.91
2430 2942 2.174210 ACTATGGACTACCTACGGAGCA 59.826 50.000 0.00 0.00 37.04 4.26
2431 2943 2.553172 CACTATGGACTACCTACGGAGC 59.447 54.545 0.00 0.00 37.04 4.70
2432 2944 4.082665 TCACTATGGACTACCTACGGAG 57.917 50.000 0.00 0.00 37.04 4.63
2433 2945 4.508551 TTCACTATGGACTACCTACGGA 57.491 45.455 0.00 0.00 37.04 4.69
2434 2946 5.535406 AGATTTCACTATGGACTACCTACGG 59.465 44.000 0.00 0.00 37.04 4.02
2435 2947 6.487331 AGAGATTTCACTATGGACTACCTACG 59.513 42.308 0.00 0.00 37.04 3.51
2436 2948 7.826918 AGAGATTTCACTATGGACTACCTAC 57.173 40.000 0.00 0.00 37.04 3.18
2437 2949 8.500238 TGTAGAGATTTCACTATGGACTACCTA 58.500 37.037 0.00 0.00 37.04 3.08
2438 2950 7.355101 TGTAGAGATTTCACTATGGACTACCT 58.645 38.462 0.00 0.00 37.04 3.08
2439 2951 7.584122 TGTAGAGATTTCACTATGGACTACC 57.416 40.000 0.00 0.00 0.00 3.18
2440 2952 9.522804 CTTTGTAGAGATTTCACTATGGACTAC 57.477 37.037 0.00 0.00 0.00 2.73
2441 2953 9.475620 TCTTTGTAGAGATTTCACTATGGACTA 57.524 33.333 0.00 0.00 0.00 2.59
2442 2954 8.254508 GTCTTTGTAGAGATTTCACTATGGACT 58.745 37.037 0.00 0.00 0.00 3.85
2443 2955 8.254508 AGTCTTTGTAGAGATTTCACTATGGAC 58.745 37.037 0.00 0.00 0.00 4.02
2444 2956 8.367660 AGTCTTTGTAGAGATTTCACTATGGA 57.632 34.615 0.00 0.00 0.00 3.41
2457 2969 9.680315 CGTCCCTAAATATAAGTCTTTGTAGAG 57.320 37.037 0.00 0.00 0.00 2.43
2458 2970 8.636213 CCGTCCCTAAATATAAGTCTTTGTAGA 58.364 37.037 0.00 0.00 0.00 2.59
2459 2971 8.636213 TCCGTCCCTAAATATAAGTCTTTGTAG 58.364 37.037 0.00 0.00 0.00 2.74
2460 2972 8.537728 TCCGTCCCTAAATATAAGTCTTTGTA 57.462 34.615 0.00 0.00 0.00 2.41
2461 2973 7.418712 CCTCCGTCCCTAAATATAAGTCTTTGT 60.419 40.741 0.00 0.00 0.00 2.83
2462 2974 6.929606 CCTCCGTCCCTAAATATAAGTCTTTG 59.070 42.308 0.00 0.00 0.00 2.77
2463 2975 6.042897 CCCTCCGTCCCTAAATATAAGTCTTT 59.957 42.308 0.00 0.00 0.00 2.52
2464 2976 5.543020 CCCTCCGTCCCTAAATATAAGTCTT 59.457 44.000 0.00 0.00 0.00 3.01
2465 2977 5.085219 CCCTCCGTCCCTAAATATAAGTCT 58.915 45.833 0.00 0.00 0.00 3.24
2466 2978 5.082425 TCCCTCCGTCCCTAAATATAAGTC 58.918 45.833 0.00 0.00 0.00 3.01
2467 2979 5.083953 TCCCTCCGTCCCTAAATATAAGT 57.916 43.478 0.00 0.00 0.00 2.24
2468 2980 5.085219 ACTCCCTCCGTCCCTAAATATAAG 58.915 45.833 0.00 0.00 0.00 1.73
2469 2981 5.083953 ACTCCCTCCGTCCCTAAATATAA 57.916 43.478 0.00 0.00 0.00 0.98
2470 2982 4.754411 ACTCCCTCCGTCCCTAAATATA 57.246 45.455 0.00 0.00 0.00 0.86
2471 2983 3.632420 ACTCCCTCCGTCCCTAAATAT 57.368 47.619 0.00 0.00 0.00 1.28
2472 2984 4.754411 ATACTCCCTCCGTCCCTAAATA 57.246 45.455 0.00 0.00 0.00 1.40
2473 2985 3.632420 ATACTCCCTCCGTCCCTAAAT 57.368 47.619 0.00 0.00 0.00 1.40
2474 2986 4.541250 TTATACTCCCTCCGTCCCTAAA 57.459 45.455 0.00 0.00 0.00 1.85
2475 2987 4.754411 ATTATACTCCCTCCGTCCCTAA 57.246 45.455 0.00 0.00 0.00 2.69
2476 2988 4.754411 AATTATACTCCCTCCGTCCCTA 57.246 45.455 0.00 0.00 0.00 3.53
2477 2989 3.632420 AATTATACTCCCTCCGTCCCT 57.368 47.619 0.00 0.00 0.00 4.20
2478 2990 6.370186 AATAAATTATACTCCCTCCGTCCC 57.630 41.667 0.00 0.00 0.00 4.46
2479 2991 9.597170 GATTAATAAATTATACTCCCTCCGTCC 57.403 37.037 0.00 0.00 0.00 4.79
2480 2992 9.597170 GGATTAATAAATTATACTCCCTCCGTC 57.403 37.037 0.00 0.00 0.00 4.79
2481 2993 9.108111 TGGATTAATAAATTATACTCCCTCCGT 57.892 33.333 0.00 0.00 0.00 4.69
2482 2994 9.379791 GTGGATTAATAAATTATACTCCCTCCG 57.620 37.037 0.00 0.00 0.00 4.63
2511 3023 6.768483 TGTGGAATAAGACATCAGAAAGTGA 58.232 36.000 0.00 0.00 40.38 3.41
2593 3106 9.668497 AATAGTCTCCCATTAAGTGAAAGTAAC 57.332 33.333 0.00 0.00 0.00 2.50
2617 3130 8.514330 TCAGGCGTTATCTAAACCAAATTAAT 57.486 30.769 0.00 0.00 0.00 1.40
2646 3161 7.500559 GCCCAAAGACAGAAGATTACTATTGAT 59.499 37.037 0.00 0.00 0.00 2.57
2647 3162 6.823689 GCCCAAAGACAGAAGATTACTATTGA 59.176 38.462 0.00 0.00 0.00 2.57
2715 3230 1.437625 GAACCTGCTTGTCAGAGAGC 58.562 55.000 0.00 0.00 45.72 4.09
2716 3231 1.345741 TGGAACCTGCTTGTCAGAGAG 59.654 52.381 0.00 0.00 45.72 3.20
2805 3320 6.139679 ACCTCCTTATCATTTTGTTGAGGA 57.860 37.500 9.06 0.00 40.43 3.71
2902 3417 4.974399 AGTCTTTCAAACCTACTTCCAGG 58.026 43.478 0.00 0.00 41.87 4.45
2968 3483 8.547173 AGATCTTCTGTACCTGAATCAGAAAAT 58.453 33.333 12.53 1.51 44.10 1.82
2976 3491 7.125507 ACAGATCAAGATCTTCTGTACCTGAAT 59.874 37.037 21.69 1.11 46.13 2.57
3128 3643 1.428448 TCAGATTCACGCTTTGTCCG 58.572 50.000 0.00 0.00 0.00 4.79
3169 3684 4.756642 CAGATGTAACAACATCACACCTGT 59.243 41.667 17.99 0.00 46.52 4.00
3197 3712 6.875195 ACTATGCCATCAAAATTTCAAACCAG 59.125 34.615 0.00 0.00 0.00 4.00
3199 3714 6.873076 TCACTATGCCATCAAAATTTCAAACC 59.127 34.615 0.00 0.00 0.00 3.27
3279 3794 5.482908 AGAGAAGTTCTGCATACACGATTT 58.517 37.500 10.90 0.00 33.93 2.17
3455 3970 7.578955 GCACTACATAGAAAAAGTACCTCTCCA 60.579 40.741 0.00 0.00 0.00 3.86
3628 4147 7.984617 TCTTAAAAACCTGTTCAAAATTGAGGG 59.015 33.333 0.00 7.30 38.61 4.30
3659 4178 2.000447 GGATCAAACCTTTCGACTCCG 59.000 52.381 0.00 0.00 37.07 4.63
3680 4199 6.915544 TCAGGATCGAATTTCTCATTCAAG 57.084 37.500 0.00 0.00 0.00 3.02
3797 4316 7.639113 TGGAACAGGGAAAAACATACATATC 57.361 36.000 0.00 0.00 0.00 1.63
3834 4353 6.831976 ACTCAAGAACTCTAAGAACCAACAT 58.168 36.000 0.00 0.00 0.00 2.71
3835 4354 6.235231 ACTCAAGAACTCTAAGAACCAACA 57.765 37.500 0.00 0.00 0.00 3.33
3949 4468 1.735571 CCGGTGTGGCTGTATAAACAC 59.264 52.381 0.00 0.00 41.71 3.32
3976 4495 9.909644 GACTACAAAAGAACATACTTCTAGACA 57.090 33.333 0.00 0.00 0.00 3.41
3990 4510 8.154203 TGACCATCTACAATGACTACAAAAGAA 58.846 33.333 0.00 0.00 0.00 2.52
4000 4520 7.332926 CCTATAAGCATGACCATCTACAATGAC 59.667 40.741 0.00 0.00 0.00 3.06
4064 4591 7.065683 TGCAATCGAAATACTCTGATTTGCTAA 59.934 33.333 11.73 0.00 31.85 3.09
4077 4604 7.510630 ACGCTTATTCTATGCAATCGAAATAC 58.489 34.615 0.00 0.00 31.42 1.89
4083 4610 7.105494 TCTTTACGCTTATTCTATGCAATCG 57.895 36.000 0.00 0.00 0.00 3.34
4096 4623 5.828747 AGCATCGACTATTCTTTACGCTTA 58.171 37.500 0.00 0.00 0.00 3.09
4114 4641 0.244721 GCCAGGTGTTTCCAAGCATC 59.755 55.000 0.00 0.00 39.02 3.91
4190 4718 1.542328 GGTACATGTGTCACAGCCACA 60.542 52.381 12.03 0.00 46.03 4.17
4211 4739 5.405269 GTCAAAACAGCCAAAATATGTGGAC 59.595 40.000 9.43 2.21 38.54 4.02
4212 4740 5.069648 TGTCAAAACAGCCAAAATATGTGGA 59.930 36.000 9.43 0.00 38.54 4.02
4213 4741 5.295950 TGTCAAAACAGCCAAAATATGTGG 58.704 37.500 1.93 1.93 39.33 4.17
4253 4784 5.523188 CAGAAGTGATTCTCCTTGTATGCTC 59.477 44.000 0.00 0.00 0.00 4.26
4332 4866 5.449999 GGGAATACGGCAATAGAAAGGTTTG 60.450 44.000 0.00 0.00 0.00 2.93
4341 4875 2.549754 CAAGCAGGGAATACGGCAATAG 59.450 50.000 0.00 0.00 0.00 1.73
4349 4884 6.014156 AGTGATATAGGTCAAGCAGGGAATAC 60.014 42.308 0.00 0.00 0.00 1.89
4456 4992 2.489938 ACCACAGTGCAAATCCGTAT 57.510 45.000 0.00 0.00 0.00 3.06
4582 5118 3.066380 GCCCAACAATGCCAAGTTAAAG 58.934 45.455 0.00 0.00 0.00 1.85
4633 5169 2.700897 GGGCATGATATCGCTACCCTAT 59.299 50.000 13.10 0.00 32.88 2.57
4663 5199 6.743575 ATTTATTGAGCAGACAACCTACAC 57.256 37.500 0.00 0.00 32.50 2.90
4674 5210 5.008019 ACGGCTGTGAATATTTATTGAGCAG 59.992 40.000 0.00 0.00 0.00 4.24
4713 5249 3.103007 GTTCAAAACGGACTGGTTTTCG 58.897 45.455 0.00 0.00 45.57 3.46
4765 5301 2.351738 GCAGAAAACCATAGGTGCACAC 60.352 50.000 20.43 8.23 35.34 3.82
4779 5315 5.592282 TGGATTTCTAGTGTTGTGCAGAAAA 59.408 36.000 0.00 0.00 39.65 2.29
4913 5491 7.506599 TCATGACACATGAAAATAGCCCATTAT 59.493 33.333 11.27 0.00 0.00 1.28
5031 5610 9.151471 TCATCAAGAGATTTAAGTTTAAGACCG 57.849 33.333 0.00 0.00 30.20 4.79
5118 5697 2.355007 CCAATCTCAAACCATTTGGGGC 60.355 50.000 0.96 0.00 41.51 5.80
5144 5723 3.584406 AGAGGTTTCAGATGTCGTCAG 57.416 47.619 0.00 0.00 0.00 3.51
5145 5724 5.661056 AATAGAGGTTTCAGATGTCGTCA 57.339 39.130 0.00 0.00 0.00 4.35
5146 5725 7.028926 TCTAATAGAGGTTTCAGATGTCGTC 57.971 40.000 0.00 0.00 0.00 4.20
5147 5726 7.259161 GTTCTAATAGAGGTTTCAGATGTCGT 58.741 38.462 0.00 0.00 0.00 4.34
5344 5924 4.270834 ACAGCTACGTCTTCTAGATTCCA 58.729 43.478 0.00 0.00 0.00 3.53
5558 6159 8.954950 AGAGATCGTATCATGTGAAAAGAAAT 57.045 30.769 0.00 0.00 0.00 2.17
5620 6355 2.838637 TTTGGGGAGTCTGTTTGGTT 57.161 45.000 0.00 0.00 0.00 3.67
5658 6393 4.841861 TTCATTACGCCCGGCCCG 62.842 66.667 3.10 10.66 0.00 6.13
5659 6394 1.388837 ATTTTCATTACGCCCGGCCC 61.389 55.000 3.10 0.00 0.00 5.80
5695 6430 7.893124 ATCTACCTTTGAATTCTTGATGCAT 57.107 32.000 0.00 0.00 0.00 3.96
5780 6515 7.950512 TGGACAATTAGAACATGTGTGAAAAT 58.049 30.769 0.00 0.00 0.00 1.82
5798 6533 5.649395 CACTTGGACAGTTCATATGGACAAT 59.351 40.000 16.62 3.42 30.92 2.71
5848 6591 4.346734 ACATCATTCACAATCGAGCAAC 57.653 40.909 0.00 0.00 0.00 4.17
5869 6612 6.017440 AGAGCAGCGTTTGAACAATTTAAGTA 60.017 34.615 0.00 0.00 0.00 2.24
5870 6613 4.932146 AGCAGCGTTTGAACAATTTAAGT 58.068 34.783 0.00 0.00 0.00 2.24
5871 6614 5.215160 AGAGCAGCGTTTGAACAATTTAAG 58.785 37.500 0.00 0.00 0.00 1.85
5872 6615 5.181690 AGAGCAGCGTTTGAACAATTTAA 57.818 34.783 0.00 0.00 0.00 1.52
5874 6617 3.715628 AGAGCAGCGTTTGAACAATTT 57.284 38.095 0.00 0.00 0.00 1.82
5875 6618 4.065088 TCTAGAGCAGCGTTTGAACAATT 58.935 39.130 0.00 0.00 0.00 2.32
5889 6637 9.358797 GGATTGTCATATCCAGCTTCTAGAGCA 62.359 44.444 14.12 0.00 45.36 4.26
5890 6638 7.069738 GGATTGTCATATCCAGCTTCTAGAGC 61.070 46.154 6.17 6.17 43.04 4.09
5891 6639 6.397272 GGATTGTCATATCCAGCTTCTAGAG 58.603 44.000 0.00 0.00 43.04 2.43
5932 6680 4.060038 AGTGCGGTTGTCTTATATCCTG 57.940 45.455 0.00 0.00 0.00 3.86
5934 6682 5.449107 TCTAGTGCGGTTGTCTTATATCC 57.551 43.478 0.00 0.00 0.00 2.59
5935 6683 5.402867 GCTTCTAGTGCGGTTGTCTTATATC 59.597 44.000 0.00 0.00 0.00 1.63
5936 6684 5.069251 AGCTTCTAGTGCGGTTGTCTTATAT 59.931 40.000 5.21 0.00 35.28 0.86
5982 6774 5.542616 TGTTTGCCAAGTTGTTCATTTTG 57.457 34.783 1.45 0.00 0.00 2.44
5991 6783 5.389859 TGAGGATTATGTTTGCCAAGTTG 57.610 39.130 0.00 0.00 0.00 3.16
5995 6787 8.303780 TGAAATATGAGGATTATGTTTGCCAA 57.696 30.769 0.00 0.00 0.00 4.52
6008 6803 8.935844 GCACGACATAATTATGAAATATGAGGA 58.064 33.333 28.13 0.00 37.15 3.71
6012 6807 8.791605 GCATGCACGACATAATTATGAAATATG 58.208 33.333 28.13 21.52 36.64 1.78
6030 6825 5.463499 TTGTAGTTGTATTAGCATGCACG 57.537 39.130 21.98 0.00 0.00 5.34
6038 6833 8.301730 TCAACTCCGTTTTGTAGTTGTATTAG 57.698 34.615 12.61 0.00 46.49 1.73
6056 6852 3.311966 GCATTTCAAGTGCTTCAACTCC 58.688 45.455 0.00 0.00 39.45 3.85
6059 6855 2.036346 AGGGCATTTCAAGTGCTTCAAC 59.964 45.455 4.71 0.00 42.16 3.18
6081 6877 3.340814 AGAACTACAGGGAATGCAGTG 57.659 47.619 0.00 0.00 35.59 3.66
6082 6878 4.373156 AAAGAACTACAGGGAATGCAGT 57.627 40.909 0.00 0.00 37.08 4.40
6086 6882 8.831550 GCTAGATAAAAAGAACTACAGGGAATG 58.168 37.037 0.00 0.00 0.00 2.67
6094 6890 8.722394 ACTTTGCTGCTAGATAAAAAGAACTAC 58.278 33.333 11.72 0.00 0.00 2.73
6133 6929 5.127693 ACCTTTGATCTCCGATCGAATAG 57.872 43.478 18.66 11.00 0.00 1.73
6138 6934 2.893637 ACAACCTTTGATCTCCGATCG 58.106 47.619 8.51 8.51 0.00 3.69
6227 7024 1.568504 TATGTCCAGCCGAAACTCCT 58.431 50.000 0.00 0.00 0.00 3.69
6228 7025 2.007608 GTTATGTCCAGCCGAAACTCC 58.992 52.381 0.00 0.00 0.00 3.85
6237 7034 2.295909 TGTTTGCAAGGTTATGTCCAGC 59.704 45.455 0.00 0.00 0.00 4.85
6241 7038 7.119846 AGTCTCTATTGTTTGCAAGGTTATGTC 59.880 37.037 0.00 0.00 38.10 3.06
6246 7043 5.133221 ACAGTCTCTATTGTTTGCAAGGTT 58.867 37.500 0.00 0.00 38.10 3.50
6257 7054 4.176271 TCGTGATGCAACAGTCTCTATTG 58.824 43.478 0.00 0.00 0.00 1.90
6302 7099 5.389859 TTGGTACTCTTTTCATTGGCATG 57.610 39.130 0.00 0.00 0.00 4.06
6306 7103 7.885297 TCTGAATTTGGTACTCTTTTCATTGG 58.115 34.615 0.00 0.00 0.00 3.16
6321 7118 4.380233 GCATCACAAGACCTCTGAATTTGG 60.380 45.833 0.00 0.00 0.00 3.28
6346 7143 8.023128 CACCATCATTCTTTTTCGTTAAGTGAT 58.977 33.333 0.00 0.00 0.00 3.06
6349 7146 6.294508 CCCACCATCATTCTTTTTCGTTAAGT 60.295 38.462 0.00 0.00 0.00 2.24
6355 7152 2.493278 AGCCCACCATCATTCTTTTTCG 59.507 45.455 0.00 0.00 0.00 3.46
6410 7207 6.319911 TCAGGTATGCTCGGATATCTAGATTG 59.680 42.308 11.25 0.00 0.00 2.67
6418 7236 4.505039 GGGTTTTCAGGTATGCTCGGATAT 60.505 45.833 0.00 0.00 0.00 1.63
6453 7271 0.601558 AGCAAAGCTCATGGCACTTG 59.398 50.000 8.58 10.90 44.79 3.16
6545 7363 3.249189 AAGCACAGGGAAGGCCGA 61.249 61.111 0.00 0.00 33.83 5.54
6552 7370 4.329545 GACCGGCAAGCACAGGGA 62.330 66.667 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.