Multiple sequence alignment - TraesCS5B01G172900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G172900 chr5B 100.000 4585 0 0 1 4585 317314190 317309606 0.000000e+00 8468
1 TraesCS5B01G172900 chr5B 95.595 613 21 6 1 610 616688676 616688067 0.000000e+00 977
2 TraesCS5B01G172900 chr5A 94.527 2631 103 28 991 3602 368545716 368548324 0.000000e+00 4023
3 TraesCS5B01G172900 chr5A 95.872 218 7 1 3671 3888 368548313 368548528 7.300000e-93 351
4 TraesCS5B01G172900 chr5A 93.158 190 8 3 4396 4585 368548637 368548821 1.630000e-69 274
5 TraesCS5B01G172900 chr5A 98.214 112 1 1 4143 4254 368548524 368548634 1.300000e-45 195
6 TraesCS5B01G172900 chr5D 97.413 2087 48 6 1519 3600 279315227 279313142 0.000000e+00 3550
7 TraesCS5B01G172900 chr5D 96.029 554 14 2 971 1517 279315869 279315317 0.000000e+00 894
8 TraesCS5B01G172900 chr5D 96.180 445 14 2 4143 4585 279312959 279312516 0.000000e+00 725
9 TraesCS5B01G172900 chr5D 97.849 186 4 0 3679 3864 279313151 279312966 5.720000e-84 322
10 TraesCS5B01G172900 chr7B 96.569 612 16 4 1 610 626165051 626164443 0.000000e+00 1009
11 TraesCS5B01G172900 chr7B 96.072 611 22 2 1 610 112310108 112310717 0.000000e+00 994
12 TraesCS5B01G172900 chr7B 95.595 613 24 3 1 610 112303256 112303868 0.000000e+00 979
13 TraesCS5B01G172900 chr7B 80.165 242 39 5 4351 4585 651072105 651072344 6.100000e-39 172
14 TraesCS5B01G172900 chr3B 96.085 613 21 3 1 610 686097544 686098156 0.000000e+00 996
15 TraesCS5B01G172900 chr3B 95.285 615 24 4 1 610 709229628 709229014 0.000000e+00 970
16 TraesCS5B01G172900 chr3B 96.727 275 6 3 3872 4146 20029239 20029510 5.410000e-124 455
17 TraesCS5B01G172900 chr2B 95.752 612 22 4 1 610 656308019 656307410 0.000000e+00 983
18 TraesCS5B01G172900 chr2B 79.339 242 42 4 4351 4585 423813265 423813505 3.670000e-36 163
19 TraesCS5B01G172900 chr4B 95.603 614 22 5 1 610 15103559 15104171 0.000000e+00 979
20 TraesCS5B01G172900 chr4B 95.595 613 22 5 1 610 512217951 512217341 0.000000e+00 977
21 TraesCS5B01G172900 chr4B 97.358 265 6 1 3882 4146 178645472 178645735 2.520000e-122 449
22 TraesCS5B01G172900 chr4B 79.167 240 42 4 4351 4583 134101615 134101377 4.750000e-35 159
23 TraesCS5B01G172900 chr3D 98.092 262 5 0 3886 4147 586578935 586579196 1.500000e-124 457
24 TraesCS5B01G172900 chr3D 97.026 269 6 2 3883 4149 282527798 282527530 7.000000e-123 451
25 TraesCS5B01G172900 chr3D 96.679 271 7 2 3878 4146 407233220 407232950 2.520000e-122 449
26 TraesCS5B01G172900 chrUn 97.727 264 6 0 3884 4147 108799235 108799498 5.410000e-124 455
27 TraesCS5B01G172900 chr1B 97.037 270 6 2 3882 4150 342321853 342321585 1.940000e-123 453
28 TraesCS5B01G172900 chr1B 97.026 269 6 2 3879 4146 212061810 212061543 7.000000e-123 451
29 TraesCS5B01G172900 chr1B 76.543 243 41 10 4351 4585 334568590 334568356 8.060000e-23 119
30 TraesCS5B01G172900 chr6D 97.368 266 6 1 3882 4147 388990618 388990882 7.000000e-123 451
31 TraesCS5B01G172900 chr6B 76.860 242 29 17 4351 4585 123412717 123412496 1.350000e-20 111


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G172900 chr5B 317309606 317314190 4584 True 8468.00 8468 100.00000 1 4585 1 chr5B.!!$R1 4584
1 TraesCS5B01G172900 chr5B 616688067 616688676 609 True 977.00 977 95.59500 1 610 1 chr5B.!!$R2 609
2 TraesCS5B01G172900 chr5A 368545716 368548821 3105 False 1210.75 4023 95.44275 991 4585 4 chr5A.!!$F1 3594
3 TraesCS5B01G172900 chr5D 279312516 279315869 3353 True 1372.75 3550 96.86775 971 4585 4 chr5D.!!$R1 3614
4 TraesCS5B01G172900 chr7B 626164443 626165051 608 True 1009.00 1009 96.56900 1 610 1 chr7B.!!$R1 609
5 TraesCS5B01G172900 chr7B 112310108 112310717 609 False 994.00 994 96.07200 1 610 1 chr7B.!!$F2 609
6 TraesCS5B01G172900 chr7B 112303256 112303868 612 False 979.00 979 95.59500 1 610 1 chr7B.!!$F1 609
7 TraesCS5B01G172900 chr3B 686097544 686098156 612 False 996.00 996 96.08500 1 610 1 chr3B.!!$F2 609
8 TraesCS5B01G172900 chr3B 709229014 709229628 614 True 970.00 970 95.28500 1 610 1 chr3B.!!$R1 609
9 TraesCS5B01G172900 chr2B 656307410 656308019 609 True 983.00 983 95.75200 1 610 1 chr2B.!!$R1 609
10 TraesCS5B01G172900 chr4B 15103559 15104171 612 False 979.00 979 95.60300 1 610 1 chr4B.!!$F1 609
11 TraesCS5B01G172900 chr4B 512217341 512217951 610 True 977.00 977 95.59500 1 610 1 chr4B.!!$R2 609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
703 710 0.034186 CTTCCTGGGCTGCCACATTA 60.034 55.0 22.05 4.53 0.00 1.90 F
704 711 0.034186 TTCCTGGGCTGCCACATTAG 60.034 55.0 22.05 9.69 0.00 1.73 F
1346 1360 0.040204 CCCCTTGACCTTCATGCCTT 59.960 55.0 0.00 0.00 0.00 4.35 F
1611 1713 0.101219 TGCCTCATCGTCGACTGATG 59.899 55.0 28.73 28.73 43.62 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1598 1700 1.226688 CACCGCATCAGTCGACGAT 60.227 57.895 10.46 12.86 0.00 3.73 R
1983 2087 1.973281 AAGCAACTGGGTGGCATCG 60.973 57.895 0.00 0.00 34.42 3.84 R
3179 3296 1.893137 TGAGCTCTCTAGGCAACGAAA 59.107 47.619 16.19 0.00 46.39 3.46 R
3593 3712 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
385 389 1.000359 TGCTGGATCAGAGTCCGGA 60.000 57.895 0.00 0.00 45.79 5.14
447 451 3.772060 GTACGTTCGGTACTTGGATCT 57.228 47.619 0.00 0.00 46.50 2.75
490 494 1.390123 CTACATCAACCGCGTTGTCAG 59.610 52.381 16.97 11.99 43.23 3.51
546 551 4.263331 GGACAATACTCTCCCCTTTGTTGA 60.263 45.833 0.00 0.00 31.09 3.18
610 617 2.460757 TTACTACGTTCCCCAACAGC 57.539 50.000 0.00 0.00 32.14 4.40
611 618 1.340088 TACTACGTTCCCCAACAGCA 58.660 50.000 0.00 0.00 32.14 4.41
612 619 0.250166 ACTACGTTCCCCAACAGCAC 60.250 55.000 0.00 0.00 32.14 4.40
613 620 0.953960 CTACGTTCCCCAACAGCACC 60.954 60.000 0.00 0.00 32.14 5.01
614 621 1.697082 TACGTTCCCCAACAGCACCA 61.697 55.000 0.00 0.00 32.14 4.17
615 622 1.826054 CGTTCCCCAACAGCACCAA 60.826 57.895 0.00 0.00 32.14 3.67
616 623 1.739667 GTTCCCCAACAGCACCAAC 59.260 57.895 0.00 0.00 32.14 3.77
617 624 0.755327 GTTCCCCAACAGCACCAACT 60.755 55.000 0.00 0.00 32.14 3.16
618 625 0.467290 TTCCCCAACAGCACCAACTC 60.467 55.000 0.00 0.00 0.00 3.01
619 626 1.903404 CCCCAACAGCACCAACTCC 60.903 63.158 0.00 0.00 0.00 3.85
620 627 1.903404 CCCAACAGCACCAACTCCC 60.903 63.158 0.00 0.00 0.00 4.30
621 628 1.151450 CCAACAGCACCAACTCCCT 59.849 57.895 0.00 0.00 0.00 4.20
622 629 0.468029 CCAACAGCACCAACTCCCTT 60.468 55.000 0.00 0.00 0.00 3.95
623 630 0.670162 CAACAGCACCAACTCCCTTG 59.330 55.000 0.00 0.00 0.00 3.61
624 631 0.258774 AACAGCACCAACTCCCTTGT 59.741 50.000 0.00 0.00 0.00 3.16
625 632 0.179018 ACAGCACCAACTCCCTTGTC 60.179 55.000 0.00 0.00 0.00 3.18
626 633 1.071471 AGCACCAACTCCCTTGTCG 59.929 57.895 0.00 0.00 0.00 4.35
627 634 2.617274 GCACCAACTCCCTTGTCGC 61.617 63.158 0.00 0.00 0.00 5.19
628 635 1.966451 CACCAACTCCCTTGTCGCC 60.966 63.158 0.00 0.00 0.00 5.54
629 636 2.147387 ACCAACTCCCTTGTCGCCT 61.147 57.895 0.00 0.00 0.00 5.52
630 637 1.376037 CCAACTCCCTTGTCGCCTC 60.376 63.158 0.00 0.00 0.00 4.70
631 638 1.674057 CAACTCCCTTGTCGCCTCT 59.326 57.895 0.00 0.00 0.00 3.69
632 639 0.671781 CAACTCCCTTGTCGCCTCTG 60.672 60.000 0.00 0.00 0.00 3.35
633 640 1.831652 AACTCCCTTGTCGCCTCTGG 61.832 60.000 0.00 0.00 0.00 3.86
634 641 3.672295 CTCCCTTGTCGCCTCTGGC 62.672 68.421 0.00 0.00 46.75 4.85
655 662 4.713946 GGCACGGAATCCAAGACA 57.286 55.556 0.00 0.00 0.00 3.41
656 663 2.471255 GGCACGGAATCCAAGACAG 58.529 57.895 0.00 0.00 0.00 3.51
657 664 1.026718 GGCACGGAATCCAAGACAGG 61.027 60.000 0.00 0.00 0.00 4.00
658 665 0.036388 GCACGGAATCCAAGACAGGA 60.036 55.000 0.00 0.00 43.01 3.86
659 666 2.009042 GCACGGAATCCAAGACAGGAG 61.009 57.143 0.00 0.00 41.90 3.69
660 667 1.550524 CACGGAATCCAAGACAGGAGA 59.449 52.381 0.00 0.00 41.90 3.71
661 668 1.827969 ACGGAATCCAAGACAGGAGAG 59.172 52.381 0.00 0.00 41.90 3.20
662 669 2.103373 CGGAATCCAAGACAGGAGAGA 58.897 52.381 0.00 0.00 41.90 3.10
663 670 2.159170 CGGAATCCAAGACAGGAGAGAC 60.159 54.545 0.00 0.00 41.90 3.36
664 671 2.834549 GGAATCCAAGACAGGAGAGACA 59.165 50.000 0.00 0.00 41.90 3.41
665 672 3.454082 GGAATCCAAGACAGGAGAGACAT 59.546 47.826 0.00 0.00 41.90 3.06
666 673 4.080638 GGAATCCAAGACAGGAGAGACATT 60.081 45.833 0.00 0.00 41.90 2.71
667 674 4.751767 ATCCAAGACAGGAGAGACATTC 57.248 45.455 0.00 0.00 41.90 2.67
668 675 3.784178 TCCAAGACAGGAGAGACATTCT 58.216 45.455 0.00 0.00 39.43 2.40
678 685 2.818921 AGAGACATTCTCAGCAGGACT 58.181 47.619 5.99 0.00 45.73 3.85
679 686 2.760092 AGAGACATTCTCAGCAGGACTC 59.240 50.000 5.99 0.00 45.73 3.36
680 687 1.476085 AGACATTCTCAGCAGGACTCG 59.524 52.381 0.00 0.00 0.00 4.18
681 688 0.108424 ACATTCTCAGCAGGACTCGC 60.108 55.000 0.00 0.00 0.00 5.03
682 689 0.175302 CATTCTCAGCAGGACTCGCT 59.825 55.000 0.00 0.00 41.47 4.93
683 690 0.459489 ATTCTCAGCAGGACTCGCTC 59.541 55.000 0.00 0.00 37.72 5.03
684 691 1.599606 TTCTCAGCAGGACTCGCTCC 61.600 60.000 0.00 0.00 37.72 4.70
691 698 2.896443 GGACTCGCTCCTTCCTGG 59.104 66.667 0.00 0.00 35.89 4.45
692 699 2.726351 GGACTCGCTCCTTCCTGGG 61.726 68.421 0.00 0.00 35.89 4.45
693 700 3.378399 GACTCGCTCCTTCCTGGGC 62.378 68.421 0.00 0.00 36.20 5.36
694 701 3.080121 CTCGCTCCTTCCTGGGCT 61.080 66.667 0.00 0.00 36.20 5.19
695 702 3.382803 CTCGCTCCTTCCTGGGCTG 62.383 68.421 0.00 0.00 36.20 4.85
697 704 4.811364 GCTCCTTCCTGGGCTGCC 62.811 72.222 11.05 11.05 36.20 4.85
698 705 3.333219 CTCCTTCCTGGGCTGCCA 61.333 66.667 22.05 5.83 36.20 4.92
699 706 3.635268 CTCCTTCCTGGGCTGCCAC 62.635 68.421 22.05 10.55 36.20 5.01
700 707 3.970410 CCTTCCTGGGCTGCCACA 61.970 66.667 22.05 14.67 0.00 4.17
701 708 2.357836 CTTCCTGGGCTGCCACAT 59.642 61.111 22.05 0.00 0.00 3.21
702 709 1.304713 CTTCCTGGGCTGCCACATT 60.305 57.895 22.05 0.00 0.00 2.71
703 710 0.034186 CTTCCTGGGCTGCCACATTA 60.034 55.000 22.05 4.53 0.00 1.90
704 711 0.034186 TTCCTGGGCTGCCACATTAG 60.034 55.000 22.05 9.69 0.00 1.73
705 712 2.123428 CCTGGGCTGCCACATTAGC 61.123 63.158 22.05 1.06 39.17 3.09
709 716 4.643795 GCTGCCACATTAGCCTGA 57.356 55.556 0.00 0.00 33.89 3.86
710 717 3.106738 GCTGCCACATTAGCCTGAT 57.893 52.632 0.00 0.00 33.89 2.90
711 718 0.950116 GCTGCCACATTAGCCTGATC 59.050 55.000 0.00 0.00 33.89 2.92
712 719 1.476471 GCTGCCACATTAGCCTGATCT 60.476 52.381 0.00 0.00 33.89 2.75
713 720 2.219458 CTGCCACATTAGCCTGATCTG 58.781 52.381 0.00 0.00 0.00 2.90
714 721 1.839354 TGCCACATTAGCCTGATCTGA 59.161 47.619 0.38 0.00 0.00 3.27
715 722 2.440627 TGCCACATTAGCCTGATCTGAT 59.559 45.455 0.38 0.00 0.00 2.90
716 723 2.812591 GCCACATTAGCCTGATCTGATG 59.187 50.000 0.38 0.00 36.49 3.07
717 724 3.409570 CCACATTAGCCTGATCTGATGG 58.590 50.000 0.38 0.00 35.22 3.51
718 725 2.812591 CACATTAGCCTGATCTGATGGC 59.187 50.000 10.23 10.23 46.42 4.40
721 728 2.824546 GCCTGATCTGATGGCCGA 59.175 61.111 7.58 0.00 40.71 5.54
722 729 1.146930 GCCTGATCTGATGGCCGAA 59.853 57.895 7.58 0.00 40.71 4.30
723 730 0.250640 GCCTGATCTGATGGCCGAAT 60.251 55.000 7.58 0.00 40.71 3.34
724 731 1.816961 GCCTGATCTGATGGCCGAATT 60.817 52.381 7.58 0.00 40.71 2.17
725 732 1.878088 CCTGATCTGATGGCCGAATTG 59.122 52.381 0.00 0.00 0.00 2.32
726 733 1.266175 CTGATCTGATGGCCGAATTGC 59.734 52.381 0.00 0.00 0.00 3.56
733 740 2.517166 GGCCGAATTGCCCCTCTC 60.517 66.667 0.00 0.00 46.11 3.20
734 741 2.592308 GCCGAATTGCCCCTCTCT 59.408 61.111 0.00 0.00 0.00 3.10
735 742 1.524849 GCCGAATTGCCCCTCTCTC 60.525 63.158 0.00 0.00 0.00 3.20
736 743 1.147153 CCGAATTGCCCCTCTCTCC 59.853 63.158 0.00 0.00 0.00 3.71
737 744 1.227380 CGAATTGCCCCTCTCTCCG 60.227 63.158 0.00 0.00 0.00 4.63
738 745 1.908483 GAATTGCCCCTCTCTCCGT 59.092 57.895 0.00 0.00 0.00 4.69
739 746 0.179070 GAATTGCCCCTCTCTCCGTC 60.179 60.000 0.00 0.00 0.00 4.79
740 747 0.909610 AATTGCCCCTCTCTCCGTCA 60.910 55.000 0.00 0.00 0.00 4.35
741 748 0.909610 ATTGCCCCTCTCTCCGTCAA 60.910 55.000 0.00 0.00 0.00 3.18
742 749 1.544825 TTGCCCCTCTCTCCGTCAAG 61.545 60.000 0.00 0.00 0.00 3.02
743 750 2.896443 CCCCTCTCTCCGTCAAGC 59.104 66.667 0.00 0.00 0.00 4.01
744 751 1.684049 CCCCTCTCTCCGTCAAGCT 60.684 63.158 0.00 0.00 0.00 3.74
745 752 1.515020 CCCTCTCTCCGTCAAGCTG 59.485 63.158 0.00 0.00 0.00 4.24
746 753 1.254284 CCCTCTCTCCGTCAAGCTGT 61.254 60.000 0.00 0.00 0.00 4.40
747 754 0.605589 CCTCTCTCCGTCAAGCTGTT 59.394 55.000 0.00 0.00 0.00 3.16
748 755 1.001406 CCTCTCTCCGTCAAGCTGTTT 59.999 52.381 0.00 0.00 0.00 2.83
749 756 2.064762 CTCTCTCCGTCAAGCTGTTTG 58.935 52.381 0.00 0.00 38.17 2.93
750 757 1.686587 TCTCTCCGTCAAGCTGTTTGA 59.313 47.619 2.62 2.62 43.40 2.69
751 758 2.102420 TCTCTCCGTCAAGCTGTTTGAA 59.898 45.455 8.55 0.00 46.85 2.69
752 759 2.872245 CTCTCCGTCAAGCTGTTTGAAA 59.128 45.455 8.55 0.00 46.85 2.69
753 760 3.476552 TCTCCGTCAAGCTGTTTGAAAT 58.523 40.909 8.55 0.00 46.85 2.17
754 761 3.882888 TCTCCGTCAAGCTGTTTGAAATT 59.117 39.130 8.55 0.00 46.85 1.82
755 762 4.338118 TCTCCGTCAAGCTGTTTGAAATTT 59.662 37.500 8.55 0.00 46.85 1.82
756 763 4.358851 TCCGTCAAGCTGTTTGAAATTTG 58.641 39.130 8.55 0.00 46.85 2.32
757 764 3.490526 CCGTCAAGCTGTTTGAAATTTGG 59.509 43.478 8.55 3.16 46.85 3.28
758 765 4.358851 CGTCAAGCTGTTTGAAATTTGGA 58.641 39.130 8.55 0.00 46.85 3.53
759 766 4.984161 CGTCAAGCTGTTTGAAATTTGGAT 59.016 37.500 8.55 0.00 46.85 3.41
760 767 5.463061 CGTCAAGCTGTTTGAAATTTGGATT 59.537 36.000 8.55 0.00 46.85 3.01
761 768 6.346040 CGTCAAGCTGTTTGAAATTTGGATTC 60.346 38.462 8.55 0.00 46.85 2.52
762 769 5.691305 TCAAGCTGTTTGAAATTTGGATTCG 59.309 36.000 4.36 0.00 42.69 3.34
763 770 5.452078 AGCTGTTTGAAATTTGGATTCGA 57.548 34.783 0.00 0.00 0.00 3.71
764 771 5.464168 AGCTGTTTGAAATTTGGATTCGAG 58.536 37.500 0.00 0.00 0.00 4.04
765 772 5.241506 AGCTGTTTGAAATTTGGATTCGAGA 59.758 36.000 0.00 0.00 0.00 4.04
766 773 5.920273 GCTGTTTGAAATTTGGATTCGAGAA 59.080 36.000 0.00 0.00 0.00 2.87
767 774 6.088616 GCTGTTTGAAATTTGGATTCGAGAAG 59.911 38.462 0.00 0.00 0.00 2.85
768 775 6.446318 TGTTTGAAATTTGGATTCGAGAAGG 58.554 36.000 0.00 0.00 0.00 3.46
769 776 4.701956 TGAAATTTGGATTCGAGAAGGC 57.298 40.909 0.00 0.00 0.00 4.35
770 777 3.126858 TGAAATTTGGATTCGAGAAGGCG 59.873 43.478 0.00 0.00 0.00 5.52
771 778 1.017387 ATTTGGATTCGAGAAGGCGC 58.983 50.000 0.00 0.00 0.00 6.53
772 779 0.321210 TTTGGATTCGAGAAGGCGCA 60.321 50.000 10.83 0.00 0.00 6.09
773 780 0.740868 TTGGATTCGAGAAGGCGCAG 60.741 55.000 10.83 0.00 0.00 5.18
788 795 4.290622 CAGCTGCCCCCACCTTGT 62.291 66.667 0.00 0.00 0.00 3.16
789 796 3.971702 AGCTGCCCCCACCTTGTC 61.972 66.667 0.00 0.00 0.00 3.18
791 798 4.722700 CTGCCCCCACCTTGTCGG 62.723 72.222 0.00 0.00 39.35 4.79
793 800 3.728373 GCCCCCACCTTGTCGGAT 61.728 66.667 0.00 0.00 36.31 4.18
794 801 2.372074 GCCCCCACCTTGTCGGATA 61.372 63.158 0.00 0.00 36.31 2.59
795 802 1.917336 GCCCCCACCTTGTCGGATAA 61.917 60.000 0.00 0.00 36.31 1.75
796 803 0.180406 CCCCCACCTTGTCGGATAAG 59.820 60.000 7.45 7.45 36.31 1.73
797 804 0.463833 CCCCACCTTGTCGGATAAGC 60.464 60.000 8.80 0.00 36.31 3.09
798 805 0.810031 CCCACCTTGTCGGATAAGCG 60.810 60.000 8.80 5.47 36.31 4.68
799 806 0.810031 CCACCTTGTCGGATAAGCGG 60.810 60.000 8.80 7.64 36.31 5.52
800 807 0.108329 CACCTTGTCGGATAAGCGGT 60.108 55.000 8.80 1.32 36.31 5.68
801 808 0.175073 ACCTTGTCGGATAAGCGGTC 59.825 55.000 8.80 0.00 36.31 4.79
802 809 0.174845 CCTTGTCGGATAAGCGGTCA 59.825 55.000 8.80 0.00 33.16 4.02
803 810 1.404986 CCTTGTCGGATAAGCGGTCAA 60.405 52.381 8.80 0.00 33.16 3.18
804 811 2.343101 CTTGTCGGATAAGCGGTCAAA 58.657 47.619 1.42 0.00 0.00 2.69
805 812 2.459060 TGTCGGATAAGCGGTCAAAA 57.541 45.000 0.00 0.00 0.00 2.44
806 813 2.343101 TGTCGGATAAGCGGTCAAAAG 58.657 47.619 0.00 0.00 0.00 2.27
807 814 1.062148 GTCGGATAAGCGGTCAAAAGC 59.938 52.381 0.00 0.00 0.00 3.51
808 815 1.066430 TCGGATAAGCGGTCAAAAGCT 60.066 47.619 0.00 0.00 46.97 3.74
809 816 1.062587 CGGATAAGCGGTCAAAAGCTG 59.937 52.381 0.00 0.00 43.78 4.24
810 817 2.356135 GGATAAGCGGTCAAAAGCTGA 58.644 47.619 0.00 0.00 43.78 4.26
811 818 2.945668 GGATAAGCGGTCAAAAGCTGAT 59.054 45.455 0.00 0.00 43.78 2.90
812 819 4.127171 GGATAAGCGGTCAAAAGCTGATA 58.873 43.478 0.00 0.00 43.78 2.15
813 820 4.757149 GGATAAGCGGTCAAAAGCTGATAT 59.243 41.667 0.00 0.00 43.78 1.63
814 821 5.239525 GGATAAGCGGTCAAAAGCTGATATT 59.760 40.000 0.00 0.00 43.78 1.28
815 822 4.622701 AAGCGGTCAAAAGCTGATATTC 57.377 40.909 0.00 0.00 43.78 1.75
816 823 3.878778 AGCGGTCAAAAGCTGATATTCT 58.121 40.909 0.00 0.00 42.82 2.40
817 824 3.624861 AGCGGTCAAAAGCTGATATTCTG 59.375 43.478 0.00 0.00 42.82 3.02
818 825 3.242870 GCGGTCAAAAGCTGATATTCTGG 60.243 47.826 0.00 0.00 36.14 3.86
819 826 3.242870 CGGTCAAAAGCTGATATTCTGGC 60.243 47.826 0.00 0.00 36.14 4.85
820 827 3.067320 GGTCAAAAGCTGATATTCTGGCC 59.933 47.826 0.00 0.00 36.14 5.36
821 828 2.945008 TCAAAAGCTGATATTCTGGCCG 59.055 45.455 0.00 0.00 0.00 6.13
822 829 2.684881 CAAAAGCTGATATTCTGGCCGT 59.315 45.455 0.00 0.00 0.00 5.68
823 830 2.246719 AAGCTGATATTCTGGCCGTC 57.753 50.000 0.00 0.00 0.00 4.79
824 831 1.123077 AGCTGATATTCTGGCCGTCA 58.877 50.000 0.00 0.00 0.00 4.35
825 832 1.069823 AGCTGATATTCTGGCCGTCAG 59.930 52.381 0.00 6.02 44.68 3.51
826 833 1.506493 CTGATATTCTGGCCGTCAGC 58.494 55.000 0.00 0.00 43.06 4.26
836 843 4.007644 CCGTCAGCCTGTCCTGCA 62.008 66.667 0.00 0.00 32.87 4.41
837 844 2.740055 CGTCAGCCTGTCCTGCAC 60.740 66.667 0.00 0.00 32.87 4.57
838 845 2.359230 GTCAGCCTGTCCTGCACC 60.359 66.667 0.00 0.00 32.87 5.01
839 846 4.007644 TCAGCCTGTCCTGCACCG 62.008 66.667 0.00 0.00 32.87 4.94
840 847 4.320456 CAGCCTGTCCTGCACCGT 62.320 66.667 0.00 0.00 0.00 4.83
841 848 3.560251 AGCCTGTCCTGCACCGTT 61.560 61.111 0.00 0.00 0.00 4.44
842 849 2.214216 AGCCTGTCCTGCACCGTTA 61.214 57.895 0.00 0.00 0.00 3.18
843 850 1.741770 GCCTGTCCTGCACCGTTAG 60.742 63.158 0.00 0.00 0.00 2.34
844 851 1.972198 CCTGTCCTGCACCGTTAGA 59.028 57.895 0.00 0.00 0.00 2.10
845 852 0.108615 CCTGTCCTGCACCGTTAGAG 60.109 60.000 0.00 0.00 0.00 2.43
846 853 0.108615 CTGTCCTGCACCGTTAGAGG 60.109 60.000 0.00 0.00 37.30 3.69
847 854 1.218316 GTCCTGCACCGTTAGAGGG 59.782 63.158 0.00 0.00 35.02 4.30
848 855 1.987855 TCCTGCACCGTTAGAGGGG 60.988 63.158 0.00 0.00 37.86 4.79
852 859 3.793888 CACCGTTAGAGGGGCCCC 61.794 72.222 35.90 35.90 35.02 5.80
855 862 3.537874 CGTTAGAGGGGCCCCGAG 61.538 72.222 35.78 19.14 41.95 4.63
856 863 3.162154 GTTAGAGGGGCCCCGAGG 61.162 72.222 35.78 0.00 41.95 4.63
867 874 1.369321 CCCCGAGGCTTAGATCAGC 59.631 63.158 0.00 0.00 39.28 4.26
868 875 1.118356 CCCCGAGGCTTAGATCAGCT 61.118 60.000 5.15 0.00 39.97 4.24
869 876 0.316841 CCCGAGGCTTAGATCAGCTC 59.683 60.000 5.15 1.25 39.97 4.09
870 877 0.316841 CCGAGGCTTAGATCAGCTCC 59.683 60.000 5.15 0.00 39.97 4.70
871 878 1.035923 CGAGGCTTAGATCAGCTCCA 58.964 55.000 5.15 0.00 39.97 3.86
872 879 1.617850 CGAGGCTTAGATCAGCTCCAT 59.382 52.381 5.15 0.00 39.97 3.41
873 880 2.352617 CGAGGCTTAGATCAGCTCCATC 60.353 54.545 5.15 0.00 39.97 3.51
874 881 1.617850 AGGCTTAGATCAGCTCCATCG 59.382 52.381 5.15 0.00 39.97 3.84
875 882 1.337635 GGCTTAGATCAGCTCCATCGG 60.338 57.143 5.15 0.00 39.97 4.18
876 883 1.938926 GCTTAGATCAGCTCCATCGGC 60.939 57.143 0.00 0.00 36.79 5.54
877 884 0.315251 TTAGATCAGCTCCATCGGCG 59.685 55.000 0.00 0.00 34.52 6.46
878 885 1.527433 TAGATCAGCTCCATCGGCGG 61.527 60.000 7.21 0.00 34.52 6.13
879 886 4.615815 ATCAGCTCCATCGGCGGC 62.616 66.667 7.21 0.00 34.52 6.53
882 889 4.408821 AGCTCCATCGGCGGCAAA 62.409 61.111 10.53 0.00 34.52 3.68
883 890 4.179579 GCTCCATCGGCGGCAAAC 62.180 66.667 10.53 0.00 0.00 2.93
884 891 2.745884 CTCCATCGGCGGCAAACA 60.746 61.111 10.53 0.00 0.00 2.83
885 892 3.039202 CTCCATCGGCGGCAAACAC 62.039 63.158 10.53 0.00 0.00 3.32
886 893 4.114997 CCATCGGCGGCAAACACC 62.115 66.667 10.53 0.00 0.00 4.16
887 894 3.361158 CATCGGCGGCAAACACCA 61.361 61.111 10.53 0.00 0.00 4.17
888 895 2.596046 ATCGGCGGCAAACACCAA 60.596 55.556 10.53 0.00 0.00 3.67
889 896 1.976474 ATCGGCGGCAAACACCAAT 60.976 52.632 10.53 0.00 0.00 3.16
890 897 1.933115 ATCGGCGGCAAACACCAATC 61.933 55.000 10.53 0.00 0.00 2.67
891 898 2.913765 CGGCGGCAAACACCAATCA 61.914 57.895 10.53 0.00 0.00 2.57
892 899 1.080569 GGCGGCAAACACCAATCAG 60.081 57.895 3.07 0.00 0.00 2.90
893 900 1.523154 GGCGGCAAACACCAATCAGA 61.523 55.000 3.07 0.00 0.00 3.27
894 901 0.387239 GCGGCAAACACCAATCAGAC 60.387 55.000 0.00 0.00 0.00 3.51
895 902 0.950836 CGGCAAACACCAATCAGACA 59.049 50.000 0.00 0.00 0.00 3.41
896 903 1.334960 CGGCAAACACCAATCAGACAC 60.335 52.381 0.00 0.00 0.00 3.67
897 904 1.000274 GGCAAACACCAATCAGACACC 60.000 52.381 0.00 0.00 0.00 4.16
898 905 1.334960 GCAAACACCAATCAGACACCG 60.335 52.381 0.00 0.00 0.00 4.94
899 906 0.951558 AAACACCAATCAGACACCGC 59.048 50.000 0.00 0.00 0.00 5.68
900 907 0.889186 AACACCAATCAGACACCGCC 60.889 55.000 0.00 0.00 0.00 6.13
901 908 2.047274 ACCAATCAGACACCGCCG 60.047 61.111 0.00 0.00 0.00 6.46
902 909 2.819595 CCAATCAGACACCGCCGG 60.820 66.667 0.00 0.00 0.00 6.13
903 910 2.264480 CAATCAGACACCGCCGGA 59.736 61.111 11.71 0.00 0.00 5.14
904 911 1.811266 CAATCAGACACCGCCGGAG 60.811 63.158 11.71 3.87 0.00 4.63
923 930 2.604686 AGGAACTCAGGCGCCTCA 60.605 61.111 30.29 15.23 0.00 3.86
924 931 2.435059 GGAACTCAGGCGCCTCAC 60.435 66.667 30.29 15.55 0.00 3.51
925 932 2.435059 GAACTCAGGCGCCTCACC 60.435 66.667 30.29 10.60 0.00 4.02
926 933 4.379243 AACTCAGGCGCCTCACCG 62.379 66.667 30.29 16.51 0.00 4.94
934 941 3.197790 CGCCTCACCGCATCCAAG 61.198 66.667 0.00 0.00 0.00 3.61
935 942 2.825836 GCCTCACCGCATCCAAGG 60.826 66.667 0.00 0.00 0.00 3.61
936 943 2.671070 CCTCACCGCATCCAAGGT 59.329 61.111 0.00 0.00 42.34 3.50
940 947 4.740822 ACCGCATCCAAGGTGGCC 62.741 66.667 0.00 0.00 39.66 5.36
964 971 4.748144 GAGCAAGGGGGCACTGGG 62.748 72.222 0.00 0.00 35.83 4.45
967 974 4.366684 CAAGGGGGCACTGGGGAC 62.367 72.222 0.00 0.00 0.00 4.46
978 985 0.609131 ACTGGGGACGCAAAATCAGG 60.609 55.000 0.00 0.00 0.00 3.86
983 990 1.339727 GGGACGCAAAATCAGGGTACT 60.340 52.381 0.00 0.00 33.61 2.73
985 992 1.737793 GACGCAAAATCAGGGTACTGG 59.262 52.381 0.00 0.00 44.99 4.00
1038 1045 1.524848 TCGGGTCTTATGCGCAAAAA 58.475 45.000 17.11 11.54 0.00 1.94
1082 1089 3.047877 CCGAAGCGACACCCAACC 61.048 66.667 0.00 0.00 0.00 3.77
1128 1135 0.397114 TCCTCCTGATGCCGCTTCTA 60.397 55.000 7.69 0.00 0.00 2.10
1325 1339 2.490148 CCCTGAGCGATGGCGACTA 61.490 63.158 0.00 0.00 46.35 2.59
1346 1360 0.040204 CCCCTTGACCTTCATGCCTT 59.960 55.000 0.00 0.00 0.00 4.35
1598 1700 3.365472 TCTTGTAGCTAGACATGCCTCA 58.635 45.455 0.00 0.00 0.00 3.86
1611 1713 0.101219 TGCCTCATCGTCGACTGATG 59.899 55.000 28.73 28.73 43.62 3.07
1707 1809 4.614475 TCTTCAGGTATGATGGTGAGTCT 58.386 43.478 0.00 0.00 34.73 3.24
1712 1814 3.117851 AGGTATGATGGTGAGTCTCTCGA 60.118 47.826 0.65 0.00 32.35 4.04
1763 1865 1.003118 CAAGATGGACCGGACCTTTGA 59.997 52.381 23.51 3.72 0.00 2.69
1911 2015 6.703165 TCTCAGCTATAACGTTATACGACTCA 59.297 38.462 21.32 7.54 46.05 3.41
1983 2087 1.443872 GCAGTGCTGTCATGCTTGC 60.444 57.895 8.18 0.00 37.00 4.01
2100 2204 7.857456 ACTGTTGGAGGTAATATCACATTGTA 58.143 34.615 0.00 0.00 0.00 2.41
2473 2582 4.462483 ACCAAAGACAAACACACATTCACT 59.538 37.500 0.00 0.00 0.00 3.41
2592 2706 6.348540 GCTTTTGCCTATATGACTATTTCCGG 60.349 42.308 0.00 0.00 40.15 5.14
2677 2793 9.639601 TGACATTTCAGTAGTTACTTCATGTAG 57.360 33.333 0.00 0.00 32.21 2.74
2701 2817 8.818622 AGTACTTATTTTCCCTTGGTTATTCC 57.181 34.615 0.00 0.00 0.00 3.01
2707 2823 3.271055 TCCCTTGGTTATTCCGTAAGC 57.729 47.619 0.00 0.00 40.40 3.09
2754 2871 5.106277 GGAGGTGCAACATTTCCTACTTTAC 60.106 44.000 3.64 0.00 39.98 2.01
2823 2940 7.512746 AGGAAAGGGGAACTTAAAAAGCTTAAT 59.487 33.333 0.00 0.00 38.85 1.40
3176 3293 4.202131 TGAAACTGATTGTGCTTTGATGCA 60.202 37.500 0.00 0.00 41.05 3.96
3179 3296 3.762288 ACTGATTGTGCTTTGATGCATCT 59.238 39.130 26.32 3.58 45.23 2.90
3341 3459 9.965902 ATTGTGGTGCCCATTTTTATTTATTTA 57.034 25.926 0.00 0.00 35.28 1.40
3345 3463 9.965902 TGGTGCCCATTTTTATTTATTTATTGT 57.034 25.926 0.00 0.00 0.00 2.71
3588 3707 5.048504 GCAAGATTGGAGAATGACTGAAACA 60.049 40.000 0.00 0.00 0.00 2.83
3589 3708 6.609533 CAAGATTGGAGAATGACTGAAACAG 58.390 40.000 0.00 0.00 37.52 3.16
3591 3710 5.704515 AGATTGGAGAATGACTGAAACAGTG 59.295 40.000 9.15 0.00 45.44 3.66
3592 3711 4.422073 TGGAGAATGACTGAAACAGTGT 57.578 40.909 9.15 0.00 45.44 3.55
3593 3712 4.129380 TGGAGAATGACTGAAACAGTGTG 58.871 43.478 9.15 0.00 45.44 3.82
3594 3713 4.130118 GGAGAATGACTGAAACAGTGTGT 58.870 43.478 9.15 0.00 45.44 3.72
3595 3714 4.024556 GGAGAATGACTGAAACAGTGTGTG 60.025 45.833 9.15 0.00 45.44 3.82
3596 3715 4.517285 AGAATGACTGAAACAGTGTGTGT 58.483 39.130 9.15 0.00 45.44 3.72
3597 3716 4.333649 AGAATGACTGAAACAGTGTGTGTG 59.666 41.667 9.15 0.00 45.44 3.82
3598 3717 3.052455 TGACTGAAACAGTGTGTGTGT 57.948 42.857 9.15 0.00 45.44 3.72
3599 3718 2.741517 TGACTGAAACAGTGTGTGTGTG 59.258 45.455 9.15 0.00 45.44 3.82
3600 3719 2.742053 GACTGAAACAGTGTGTGTGTGT 59.258 45.455 9.15 0.00 45.44 3.72
3601 3720 2.483877 ACTGAAACAGTGTGTGTGTGTG 59.516 45.455 0.00 0.00 43.63 3.82
3602 3721 2.483877 CTGAAACAGTGTGTGTGTGTGT 59.516 45.455 0.00 0.00 40.26 3.72
3603 3722 2.225255 TGAAACAGTGTGTGTGTGTGTG 59.775 45.455 0.00 0.00 40.26 3.82
3604 3723 1.890876 AACAGTGTGTGTGTGTGTGT 58.109 45.000 0.00 0.00 40.26 3.72
3605 3724 1.155889 ACAGTGTGTGTGTGTGTGTG 58.844 50.000 0.00 0.00 38.28 3.82
3606 3725 1.155889 CAGTGTGTGTGTGTGTGTGT 58.844 50.000 0.00 0.00 0.00 3.72
3607 3726 1.136000 CAGTGTGTGTGTGTGTGTGTG 60.136 52.381 0.00 0.00 0.00 3.82
3608 3727 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
3609 3728 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
3610 3729 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
3611 3730 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
3612 3731 0.454285 GTGTGTGTGTGTGTGTGTGC 60.454 55.000 0.00 0.00 0.00 4.57
3613 3732 1.225991 GTGTGTGTGTGTGTGTGCG 60.226 57.895 0.00 0.00 0.00 5.34
3614 3733 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
3615 3734 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
3663 3782 4.310788 TGCGTGCGTGCATGTGTG 62.311 61.111 14.92 0.00 40.62 3.82
3664 3783 4.312231 GCGTGCGTGCATGTGTGT 62.312 61.111 14.92 0.00 35.52 3.72
3665 3784 2.425610 CGTGCGTGCATGTGTGTG 60.426 61.111 7.93 0.00 0.00 3.82
3666 3785 2.715005 GTGCGTGCATGTGTGTGT 59.285 55.556 7.93 0.00 0.00 3.72
3667 3786 1.655046 GTGCGTGCATGTGTGTGTG 60.655 57.895 7.93 0.00 0.00 3.82
3668 3787 2.111582 TGCGTGCATGTGTGTGTGT 61.112 52.632 7.93 0.00 0.00 3.72
3669 3788 1.655046 GCGTGCATGTGTGTGTGTG 60.655 57.895 7.93 0.00 0.00 3.82
3711 3830 1.955778 CCTGTGAGAATGCAAACACCA 59.044 47.619 0.00 0.00 33.08 4.17
3767 3886 3.769739 TTGTAGATGTGCAGTTCCTGT 57.230 42.857 0.00 0.00 33.43 4.00
3899 4018 4.107363 CTGTAAGTACTCCCTCCGTTTC 57.893 50.000 0.00 0.00 0.00 2.78
3900 4019 3.762823 CTGTAAGTACTCCCTCCGTTTCT 59.237 47.826 0.00 0.00 0.00 2.52
3901 4020 4.154942 TGTAAGTACTCCCTCCGTTTCTT 58.845 43.478 0.00 0.00 0.00 2.52
3902 4021 4.590222 TGTAAGTACTCCCTCCGTTTCTTT 59.410 41.667 0.00 0.00 0.00 2.52
3903 4022 4.701651 AAGTACTCCCTCCGTTTCTTTT 57.298 40.909 0.00 0.00 0.00 2.27
3904 4023 4.701651 AGTACTCCCTCCGTTTCTTTTT 57.298 40.909 0.00 0.00 0.00 1.94
3905 4024 5.813513 AGTACTCCCTCCGTTTCTTTTTA 57.186 39.130 0.00 0.00 0.00 1.52
3906 4025 5.791666 AGTACTCCCTCCGTTTCTTTTTAG 58.208 41.667 0.00 0.00 0.00 1.85
3907 4026 4.701651 ACTCCCTCCGTTTCTTTTTAGT 57.298 40.909 0.00 0.00 0.00 2.24
3908 4027 4.639334 ACTCCCTCCGTTTCTTTTTAGTC 58.361 43.478 0.00 0.00 0.00 2.59
3909 4028 4.347292 ACTCCCTCCGTTTCTTTTTAGTCT 59.653 41.667 0.00 0.00 0.00 3.24
3910 4029 4.638304 TCCCTCCGTTTCTTTTTAGTCTG 58.362 43.478 0.00 0.00 0.00 3.51
3911 4030 3.188667 CCCTCCGTTTCTTTTTAGTCTGC 59.811 47.826 0.00 0.00 0.00 4.26
3912 4031 3.813166 CCTCCGTTTCTTTTTAGTCTGCA 59.187 43.478 0.00 0.00 0.00 4.41
3913 4032 4.455877 CCTCCGTTTCTTTTTAGTCTGCAT 59.544 41.667 0.00 0.00 0.00 3.96
3914 4033 5.642063 CCTCCGTTTCTTTTTAGTCTGCATA 59.358 40.000 0.00 0.00 0.00 3.14
3915 4034 6.316390 CCTCCGTTTCTTTTTAGTCTGCATAT 59.684 38.462 0.00 0.00 0.00 1.78
3916 4035 7.494625 CCTCCGTTTCTTTTTAGTCTGCATATA 59.505 37.037 0.00 0.00 0.00 0.86
3917 4036 8.780846 TCCGTTTCTTTTTAGTCTGCATATAA 57.219 30.769 0.00 0.00 0.00 0.98
3918 4037 8.879759 TCCGTTTCTTTTTAGTCTGCATATAAG 58.120 33.333 0.00 0.00 0.00 1.73
3919 4038 8.122952 CCGTTTCTTTTTAGTCTGCATATAAGG 58.877 37.037 0.00 0.00 0.00 2.69
3920 4039 8.665685 CGTTTCTTTTTAGTCTGCATATAAGGT 58.334 33.333 0.00 0.00 0.00 3.50
3924 4043 8.956426 TCTTTTTAGTCTGCATATAAGGTTTGG 58.044 33.333 0.00 0.00 0.00 3.28
3925 4044 8.644374 TTTTTAGTCTGCATATAAGGTTTGGT 57.356 30.769 0.00 0.00 0.00 3.67
3926 4045 7.859325 TTTAGTCTGCATATAAGGTTTGGTC 57.141 36.000 0.00 0.00 0.00 4.02
3927 4046 5.435686 AGTCTGCATATAAGGTTTGGTCA 57.564 39.130 0.00 0.00 0.00 4.02
3928 4047 5.815581 AGTCTGCATATAAGGTTTGGTCAA 58.184 37.500 0.00 0.00 0.00 3.18
3929 4048 6.245408 AGTCTGCATATAAGGTTTGGTCAAA 58.755 36.000 0.00 0.00 0.00 2.69
3930 4049 6.375455 AGTCTGCATATAAGGTTTGGTCAAAG 59.625 38.462 0.00 0.00 0.00 2.77
3931 4050 6.151144 GTCTGCATATAAGGTTTGGTCAAAGT 59.849 38.462 0.00 0.00 0.00 2.66
3932 4051 6.374333 TCTGCATATAAGGTTTGGTCAAAGTC 59.626 38.462 0.00 0.00 0.00 3.01
3933 4052 6.007076 TGCATATAAGGTTTGGTCAAAGTCA 58.993 36.000 0.00 0.00 0.00 3.41
3934 4053 6.491745 TGCATATAAGGTTTGGTCAAAGTCAA 59.508 34.615 0.00 0.00 0.00 3.18
3935 4054 7.029563 GCATATAAGGTTTGGTCAAAGTCAAG 58.970 38.462 0.00 0.00 0.00 3.02
3936 4055 3.801114 AAGGTTTGGTCAAAGTCAAGC 57.199 42.857 0.00 0.00 0.00 4.01
3937 4056 3.018423 AGGTTTGGTCAAAGTCAAGCT 57.982 42.857 0.00 0.00 0.00 3.74
3938 4057 3.365472 AGGTTTGGTCAAAGTCAAGCTT 58.635 40.909 0.00 0.00 39.52 3.74
3955 4074 7.478520 TCAAGCTTTGTAGAGTTTGACTAAC 57.521 36.000 0.00 0.00 40.46 2.34
3957 4076 7.769044 TCAAGCTTTGTAGAGTTTGACTAACTT 59.231 33.333 0.00 0.00 47.00 2.66
3958 4077 8.398665 CAAGCTTTGTAGAGTTTGACTAACTTT 58.601 33.333 0.00 1.31 47.00 2.66
3959 4078 9.609346 AAGCTTTGTAGAGTTTGACTAACTTTA 57.391 29.630 3.78 0.37 47.00 1.85
3960 4079 9.780186 AGCTTTGTAGAGTTTGACTAACTTTAT 57.220 29.630 3.78 0.00 47.00 1.40
4019 4138 9.281075 CAATATTATCATATGCACCATGAAACG 57.719 33.333 14.85 0.00 36.08 3.60
4020 4139 6.882610 ATTATCATATGCACCATGAAACGT 57.117 33.333 14.85 3.85 36.08 3.99
4021 4140 7.977789 ATTATCATATGCACCATGAAACGTA 57.022 32.000 14.85 3.05 36.08 3.57
4022 4141 7.977789 TTATCATATGCACCATGAAACGTAT 57.022 32.000 14.85 2.96 36.08 3.06
4023 4142 6.882610 ATCATATGCACCATGAAACGTATT 57.117 33.333 14.85 0.00 36.08 1.89
4024 4143 6.691754 TCATATGCACCATGAAACGTATTT 57.308 33.333 9.77 0.00 29.55 1.40
4025 4144 7.094508 TCATATGCACCATGAAACGTATTTT 57.905 32.000 9.77 0.00 29.55 1.82
4026 4145 7.192913 TCATATGCACCATGAAACGTATTTTC 58.807 34.615 9.77 0.00 43.63 2.29
4097 4216 8.840833 AAATTTGGTCAAACTTTGTGTAGTTT 57.159 26.923 1.44 0.00 46.42 2.66
4107 4226 8.975410 AAACTTTGTGTAGTTTGACTTTAACC 57.025 30.769 0.00 0.00 44.42 2.85
4108 4227 7.690952 ACTTTGTGTAGTTTGACTTTAACCA 57.309 32.000 0.00 0.00 0.00 3.67
4109 4228 8.113173 ACTTTGTGTAGTTTGACTTTAACCAA 57.887 30.769 0.00 0.00 0.00 3.67
4110 4229 8.578151 ACTTTGTGTAGTTTGACTTTAACCAAA 58.422 29.630 0.00 0.00 0.00 3.28
4111 4230 9.581099 CTTTGTGTAGTTTGACTTTAACCAAAT 57.419 29.630 0.00 0.00 35.14 2.32
4112 4231 9.575783 TTTGTGTAGTTTGACTTTAACCAAATC 57.424 29.630 0.00 0.00 35.14 2.17
4113 4232 8.514330 TGTGTAGTTTGACTTTAACCAAATCT 57.486 30.769 0.00 0.00 35.14 2.40
4114 4233 8.962679 TGTGTAGTTTGACTTTAACCAAATCTT 58.037 29.630 0.00 0.00 35.14 2.40
4121 4240 9.781834 TTTGACTTTAACCAAATCTTATATGCG 57.218 29.630 0.00 0.00 0.00 4.73
4122 4241 7.925993 TGACTTTAACCAAATCTTATATGCGG 58.074 34.615 0.00 0.00 0.00 5.69
4123 4242 7.771361 TGACTTTAACCAAATCTTATATGCGGA 59.229 33.333 0.00 0.00 0.00 5.54
4124 4243 8.154649 ACTTTAACCAAATCTTATATGCGGAG 57.845 34.615 0.00 0.00 0.00 4.63
4125 4244 7.773690 ACTTTAACCAAATCTTATATGCGGAGT 59.226 33.333 0.00 0.00 0.00 3.85
4126 4245 9.268268 CTTTAACCAAATCTTATATGCGGAGTA 57.732 33.333 0.00 0.00 0.00 2.59
4127 4246 9.616156 TTTAACCAAATCTTATATGCGGAGTAA 57.384 29.630 0.00 0.00 0.00 2.24
4128 4247 9.616156 TTAACCAAATCTTATATGCGGAGTAAA 57.384 29.630 0.00 0.00 0.00 2.01
4129 4248 8.514330 AACCAAATCTTATATGCGGAGTAAAA 57.486 30.769 0.00 0.00 0.00 1.52
4130 4249 8.514330 ACCAAATCTTATATGCGGAGTAAAAA 57.486 30.769 0.00 0.00 0.00 1.94
4131 4250 8.621286 ACCAAATCTTATATGCGGAGTAAAAAG 58.379 33.333 0.00 0.00 0.00 2.27
4132 4251 8.836413 CCAAATCTTATATGCGGAGTAAAAAGA 58.164 33.333 0.00 0.00 0.00 2.52
4136 4255 7.902032 TCTTATATGCGGAGTAAAAAGAAACG 58.098 34.615 0.00 0.00 0.00 3.60
4137 4256 3.824414 ATGCGGAGTAAAAAGAAACGG 57.176 42.857 0.00 0.00 0.00 4.44
4138 4257 2.836262 TGCGGAGTAAAAAGAAACGGA 58.164 42.857 0.00 0.00 0.00 4.69
4139 4258 2.803956 TGCGGAGTAAAAAGAAACGGAG 59.196 45.455 0.00 0.00 0.00 4.63
4140 4259 2.159037 GCGGAGTAAAAAGAAACGGAGG 59.841 50.000 0.00 0.00 0.00 4.30
4141 4260 2.740447 CGGAGTAAAAAGAAACGGAGGG 59.260 50.000 0.00 0.00 0.00 4.30
4212 4331 0.912486 AACCTATCACTGCCTGTCCC 59.088 55.000 0.00 0.00 0.00 4.46
4294 4413 8.588290 AACAAATACAGATTGGGCATACTTTA 57.412 30.769 0.00 0.00 32.02 1.85
4462 4583 3.561528 GGGTAGGGAAGGACAAGAAAAGG 60.562 52.174 0.00 0.00 0.00 3.11
4497 4618 0.110644 GTCACAAGTGTAAGCAGCGC 60.111 55.000 0.00 0.00 0.00 5.92
4505 4626 1.552226 TGTAAGCAGCGCGTACATAC 58.448 50.000 19.03 5.83 45.25 2.39
4530 4651 3.454082 GGAAGGACTGTCCAGATCTCAAT 59.546 47.826 27.48 1.56 39.61 2.57
4547 4668 9.222581 AGATCTCAATCGTAAGTGCTAACACGA 62.223 40.741 6.64 6.64 46.22 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
161 164 3.335579 CCCGTATATAAAGGAGCAAGGC 58.664 50.000 7.00 0.00 0.00 4.35
546 551 3.439129 CGCAAGATCATGGTGATGCATAT 59.561 43.478 0.00 0.00 37.20 1.78
610 617 1.966451 GGCGACAAGGGAGTTGGTG 60.966 63.158 0.00 0.00 40.90 4.17
611 618 2.113243 GAGGCGACAAGGGAGTTGGT 62.113 60.000 0.00 0.00 40.90 3.67
612 619 1.376037 GAGGCGACAAGGGAGTTGG 60.376 63.158 0.00 0.00 40.90 3.77
613 620 0.671781 CAGAGGCGACAAGGGAGTTG 60.672 60.000 0.00 0.00 42.48 3.16
614 621 1.674057 CAGAGGCGACAAGGGAGTT 59.326 57.895 0.00 0.00 0.00 3.01
615 622 2.286523 CCAGAGGCGACAAGGGAGT 61.287 63.158 0.00 0.00 0.00 3.85
616 623 2.581354 CCAGAGGCGACAAGGGAG 59.419 66.667 0.00 0.00 0.00 4.30
617 624 3.706373 GCCAGAGGCGACAAGGGA 61.706 66.667 0.00 0.00 39.62 4.20
634 641 2.745884 TTGGATTCCGTGCCGCTG 60.746 61.111 0.00 0.00 0.00 5.18
635 642 2.436646 CTTGGATTCCGTGCCGCT 60.437 61.111 0.00 0.00 0.00 5.52
636 643 2.435938 TCTTGGATTCCGTGCCGC 60.436 61.111 0.00 0.00 0.00 6.53
637 644 1.361668 CTGTCTTGGATTCCGTGCCG 61.362 60.000 0.00 0.00 0.00 5.69
638 645 1.026718 CCTGTCTTGGATTCCGTGCC 61.027 60.000 0.00 0.00 0.00 5.01
639 646 0.036388 TCCTGTCTTGGATTCCGTGC 60.036 55.000 0.00 0.00 0.00 5.34
640 647 1.550524 TCTCCTGTCTTGGATTCCGTG 59.449 52.381 0.00 0.00 35.30 4.94
641 648 1.827969 CTCTCCTGTCTTGGATTCCGT 59.172 52.381 0.00 0.00 35.30 4.69
642 649 2.103373 TCTCTCCTGTCTTGGATTCCG 58.897 52.381 0.00 0.00 35.30 4.30
643 650 2.834549 TGTCTCTCCTGTCTTGGATTCC 59.165 50.000 0.00 0.00 35.30 3.01
644 651 4.751767 ATGTCTCTCCTGTCTTGGATTC 57.248 45.455 0.00 0.00 35.30 2.52
645 652 4.782156 AGAATGTCTCTCCTGTCTTGGATT 59.218 41.667 0.00 0.00 35.30 3.01
646 653 4.360889 AGAATGTCTCTCCTGTCTTGGAT 58.639 43.478 0.00 0.00 35.30 3.41
647 654 3.766591 GAGAATGTCTCTCCTGTCTTGGA 59.233 47.826 0.00 0.00 44.39 3.53
648 655 4.122143 GAGAATGTCTCTCCTGTCTTGG 57.878 50.000 0.00 0.00 44.39 3.61
658 665 2.760092 GAGTCCTGCTGAGAATGTCTCT 59.240 50.000 6.80 0.00 43.73 3.10
659 666 2.479389 CGAGTCCTGCTGAGAATGTCTC 60.479 54.545 0.00 0.00 43.65 3.36
660 667 1.476085 CGAGTCCTGCTGAGAATGTCT 59.524 52.381 0.00 0.00 0.00 3.41
661 668 1.919918 CGAGTCCTGCTGAGAATGTC 58.080 55.000 0.00 0.00 0.00 3.06
662 669 0.108424 GCGAGTCCTGCTGAGAATGT 60.108 55.000 0.00 0.00 0.00 2.71
663 670 0.175302 AGCGAGTCCTGCTGAGAATG 59.825 55.000 0.00 0.00 42.14 2.67
664 671 0.459489 GAGCGAGTCCTGCTGAGAAT 59.541 55.000 0.00 0.00 44.18 2.40
665 672 1.599606 GGAGCGAGTCCTGCTGAGAA 61.600 60.000 0.00 0.00 44.18 2.87
666 673 2.049185 GGAGCGAGTCCTGCTGAGA 61.049 63.158 0.00 0.00 44.18 3.27
667 674 2.493973 GGAGCGAGTCCTGCTGAG 59.506 66.667 0.00 0.00 44.18 3.35
675 682 2.896443 CCCAGGAAGGAGCGAGTC 59.104 66.667 0.00 0.00 41.22 3.36
676 683 3.394836 GCCCAGGAAGGAGCGAGT 61.395 66.667 0.00 0.00 41.22 4.18
677 684 3.080121 AGCCCAGGAAGGAGCGAG 61.080 66.667 0.00 0.00 41.22 5.03
678 685 3.393970 CAGCCCAGGAAGGAGCGA 61.394 66.667 0.00 0.00 41.22 4.93
680 687 4.811364 GGCAGCCCAGGAAGGAGC 62.811 72.222 0.00 0.00 41.22 4.70
681 688 3.333219 TGGCAGCCCAGGAAGGAG 61.333 66.667 9.64 0.00 41.22 3.69
682 689 3.650950 GTGGCAGCCCAGGAAGGA 61.651 66.667 9.64 0.00 43.18 3.36
683 690 2.793317 AATGTGGCAGCCCAGGAAGG 62.793 60.000 9.64 0.00 43.18 3.46
684 691 0.034186 TAATGTGGCAGCCCAGGAAG 60.034 55.000 9.64 0.00 43.18 3.46
685 692 0.034186 CTAATGTGGCAGCCCAGGAA 60.034 55.000 9.64 0.00 43.18 3.36
686 693 1.609239 CTAATGTGGCAGCCCAGGA 59.391 57.895 9.64 0.00 43.18 3.86
687 694 2.123428 GCTAATGTGGCAGCCCAGG 61.123 63.158 9.64 3.03 43.18 4.45
688 695 3.518003 GCTAATGTGGCAGCCCAG 58.482 61.111 9.64 0.00 43.18 4.45
692 699 0.950116 GATCAGGCTAATGTGGCAGC 59.050 55.000 0.00 0.00 37.05 5.25
693 700 2.158856 TCAGATCAGGCTAATGTGGCAG 60.159 50.000 0.00 0.00 34.73 4.85
694 701 1.839354 TCAGATCAGGCTAATGTGGCA 59.161 47.619 0.00 0.00 34.73 4.92
695 702 2.627515 TCAGATCAGGCTAATGTGGC 57.372 50.000 0.00 0.00 0.00 5.01
696 703 3.409570 CCATCAGATCAGGCTAATGTGG 58.590 50.000 0.00 0.00 0.00 4.17
697 704 2.812591 GCCATCAGATCAGGCTAATGTG 59.187 50.000 4.75 0.00 44.92 3.21
698 705 3.137446 GCCATCAGATCAGGCTAATGT 57.863 47.619 4.75 0.00 44.92 2.71
705 712 1.878088 CAATTCGGCCATCAGATCAGG 59.122 52.381 2.24 0.00 0.00 3.86
706 713 1.266175 GCAATTCGGCCATCAGATCAG 59.734 52.381 2.24 0.00 0.00 2.90
707 714 1.311859 GCAATTCGGCCATCAGATCA 58.688 50.000 2.24 0.00 0.00 2.92
717 724 1.524849 GAGAGAGGGGCAATTCGGC 60.525 63.158 0.00 0.00 40.20 5.54
718 725 1.147153 GGAGAGAGGGGCAATTCGG 59.853 63.158 0.00 0.00 0.00 4.30
719 726 1.227380 CGGAGAGAGGGGCAATTCG 60.227 63.158 0.00 0.00 0.00 3.34
720 727 0.179070 GACGGAGAGAGGGGCAATTC 60.179 60.000 0.00 0.00 0.00 2.17
721 728 0.909610 TGACGGAGAGAGGGGCAATT 60.910 55.000 0.00 0.00 0.00 2.32
722 729 0.909610 TTGACGGAGAGAGGGGCAAT 60.910 55.000 0.00 0.00 0.00 3.56
723 730 1.535444 TTGACGGAGAGAGGGGCAA 60.535 57.895 0.00 0.00 0.00 4.52
724 731 1.984570 CTTGACGGAGAGAGGGGCA 60.985 63.158 0.00 0.00 0.00 5.36
725 732 2.896443 CTTGACGGAGAGAGGGGC 59.104 66.667 0.00 0.00 0.00 5.80
726 733 1.684049 AGCTTGACGGAGAGAGGGG 60.684 63.158 0.00 0.00 0.00 4.79
727 734 1.254284 ACAGCTTGACGGAGAGAGGG 61.254 60.000 0.00 0.00 0.00 4.30
728 735 0.605589 AACAGCTTGACGGAGAGAGG 59.394 55.000 0.00 0.00 0.00 3.69
729 736 2.064762 CAAACAGCTTGACGGAGAGAG 58.935 52.381 0.00 0.00 37.17 3.20
730 737 1.686587 TCAAACAGCTTGACGGAGAGA 59.313 47.619 0.00 0.00 39.20 3.10
731 738 2.154854 TCAAACAGCTTGACGGAGAG 57.845 50.000 0.00 0.00 39.20 3.20
732 739 2.613026 TTCAAACAGCTTGACGGAGA 57.387 45.000 0.00 0.00 43.90 3.71
733 740 3.904136 ATTTCAAACAGCTTGACGGAG 57.096 42.857 0.00 0.00 43.90 4.63
734 741 4.358851 CAAATTTCAAACAGCTTGACGGA 58.641 39.130 0.00 0.00 43.90 4.69
735 742 3.490526 CCAAATTTCAAACAGCTTGACGG 59.509 43.478 0.00 0.00 43.90 4.79
736 743 4.358851 TCCAAATTTCAAACAGCTTGACG 58.641 39.130 0.00 0.00 43.90 4.35
737 744 6.346040 CGAATCCAAATTTCAAACAGCTTGAC 60.346 38.462 0.00 0.00 43.90 3.18
738 745 5.691305 CGAATCCAAATTTCAAACAGCTTGA 59.309 36.000 0.00 0.00 42.48 3.02
739 746 5.691305 TCGAATCCAAATTTCAAACAGCTTG 59.309 36.000 0.00 0.00 36.25 4.01
740 747 5.841810 TCGAATCCAAATTTCAAACAGCTT 58.158 33.333 0.00 0.00 0.00 3.74
741 748 5.241506 TCTCGAATCCAAATTTCAAACAGCT 59.758 36.000 0.00 0.00 0.00 4.24
742 749 5.460646 TCTCGAATCCAAATTTCAAACAGC 58.539 37.500 0.00 0.00 0.00 4.40
743 750 6.583806 CCTTCTCGAATCCAAATTTCAAACAG 59.416 38.462 0.00 0.00 0.00 3.16
744 751 6.446318 CCTTCTCGAATCCAAATTTCAAACA 58.554 36.000 0.00 0.00 0.00 2.83
745 752 5.346011 GCCTTCTCGAATCCAAATTTCAAAC 59.654 40.000 0.00 0.00 0.00 2.93
746 753 5.469479 GCCTTCTCGAATCCAAATTTCAAA 58.531 37.500 0.00 0.00 0.00 2.69
747 754 4.379394 CGCCTTCTCGAATCCAAATTTCAA 60.379 41.667 0.00 0.00 0.00 2.69
748 755 3.126858 CGCCTTCTCGAATCCAAATTTCA 59.873 43.478 0.00 0.00 0.00 2.69
749 756 3.685058 CGCCTTCTCGAATCCAAATTTC 58.315 45.455 0.00 0.00 0.00 2.17
750 757 2.159379 GCGCCTTCTCGAATCCAAATTT 60.159 45.455 0.00 0.00 0.00 1.82
751 758 1.401905 GCGCCTTCTCGAATCCAAATT 59.598 47.619 0.00 0.00 0.00 1.82
752 759 1.017387 GCGCCTTCTCGAATCCAAAT 58.983 50.000 0.00 0.00 0.00 2.32
753 760 0.321210 TGCGCCTTCTCGAATCCAAA 60.321 50.000 4.18 0.00 0.00 3.28
754 761 0.740868 CTGCGCCTTCTCGAATCCAA 60.741 55.000 4.18 0.00 0.00 3.53
755 762 1.153568 CTGCGCCTTCTCGAATCCA 60.154 57.895 4.18 0.00 0.00 3.41
756 763 2.529619 GCTGCGCCTTCTCGAATCC 61.530 63.158 4.18 0.00 0.00 3.01
757 764 1.520342 AGCTGCGCCTTCTCGAATC 60.520 57.895 4.18 0.00 0.00 2.52
758 765 1.812922 CAGCTGCGCCTTCTCGAAT 60.813 57.895 4.18 0.00 0.00 3.34
759 766 2.433145 CAGCTGCGCCTTCTCGAA 60.433 61.111 4.18 0.00 0.00 3.71
771 778 4.290622 ACAAGGTGGGGGCAGCTG 62.291 66.667 10.11 10.11 32.72 4.24
772 779 3.971702 GACAAGGTGGGGGCAGCT 61.972 66.667 0.00 0.00 33.94 4.24
774 781 4.722700 CCGACAAGGTGGGGGCAG 62.723 72.222 0.00 0.00 34.51 4.85
776 783 1.917336 TTATCCGACAAGGTGGGGGC 61.917 60.000 0.00 0.00 41.99 5.80
777 784 0.180406 CTTATCCGACAAGGTGGGGG 59.820 60.000 0.00 0.00 41.99 5.40
778 785 0.463833 GCTTATCCGACAAGGTGGGG 60.464 60.000 0.00 0.00 41.99 4.96
779 786 0.810031 CGCTTATCCGACAAGGTGGG 60.810 60.000 0.00 0.00 41.99 4.61
780 787 0.810031 CCGCTTATCCGACAAGGTGG 60.810 60.000 0.00 0.00 41.99 4.61
781 788 0.108329 ACCGCTTATCCGACAAGGTG 60.108 55.000 0.00 0.00 41.99 4.00
782 789 0.175073 GACCGCTTATCCGACAAGGT 59.825 55.000 0.00 0.00 41.99 3.50
783 790 0.174845 TGACCGCTTATCCGACAAGG 59.825 55.000 0.00 0.00 42.97 3.61
784 791 2.004583 TTGACCGCTTATCCGACAAG 57.995 50.000 0.00 0.00 0.00 3.16
785 792 2.459060 TTTGACCGCTTATCCGACAA 57.541 45.000 0.00 0.00 0.00 3.18
786 793 2.343101 CTTTTGACCGCTTATCCGACA 58.657 47.619 0.00 0.00 0.00 4.35
787 794 1.062148 GCTTTTGACCGCTTATCCGAC 59.938 52.381 0.00 0.00 0.00 4.79
788 795 1.066430 AGCTTTTGACCGCTTATCCGA 60.066 47.619 0.00 0.00 31.17 4.55
789 796 1.062587 CAGCTTTTGACCGCTTATCCG 59.937 52.381 0.00 0.00 33.45 4.18
790 797 2.356135 TCAGCTTTTGACCGCTTATCC 58.644 47.619 0.00 0.00 33.45 2.59
791 798 5.931441 ATATCAGCTTTTGACCGCTTATC 57.069 39.130 0.00 0.00 38.99 1.75
792 799 6.017605 CAGAATATCAGCTTTTGACCGCTTAT 60.018 38.462 0.00 0.00 38.99 1.73
793 800 5.294306 CAGAATATCAGCTTTTGACCGCTTA 59.706 40.000 0.00 0.00 38.99 3.09
794 801 4.095483 CAGAATATCAGCTTTTGACCGCTT 59.905 41.667 0.00 0.00 38.99 4.68
795 802 3.624861 CAGAATATCAGCTTTTGACCGCT 59.375 43.478 0.00 0.00 38.99 5.52
796 803 3.242870 CCAGAATATCAGCTTTTGACCGC 60.243 47.826 0.00 0.00 38.99 5.68
797 804 3.242870 GCCAGAATATCAGCTTTTGACCG 60.243 47.826 0.00 0.00 38.99 4.79
798 805 3.067320 GGCCAGAATATCAGCTTTTGACC 59.933 47.826 0.00 0.00 38.99 4.02
799 806 3.242870 CGGCCAGAATATCAGCTTTTGAC 60.243 47.826 2.24 0.00 38.99 3.18
800 807 2.945008 CGGCCAGAATATCAGCTTTTGA 59.055 45.455 2.24 0.00 40.85 2.69
801 808 2.684881 ACGGCCAGAATATCAGCTTTTG 59.315 45.455 2.24 0.00 0.00 2.44
802 809 2.945668 GACGGCCAGAATATCAGCTTTT 59.054 45.455 2.24 0.00 0.00 2.27
803 810 2.092968 TGACGGCCAGAATATCAGCTTT 60.093 45.455 2.24 0.00 0.00 3.51
804 811 1.486310 TGACGGCCAGAATATCAGCTT 59.514 47.619 2.24 0.00 0.00 3.74
805 812 1.069823 CTGACGGCCAGAATATCAGCT 59.930 52.381 2.24 0.00 45.78 4.24
806 813 1.506493 CTGACGGCCAGAATATCAGC 58.494 55.000 2.24 0.00 45.78 4.26
807 814 1.506493 GCTGACGGCCAGAATATCAG 58.494 55.000 2.24 6.65 45.78 2.90
808 815 3.686622 GCTGACGGCCAGAATATCA 57.313 52.632 2.24 0.00 45.78 2.15
819 826 4.007644 TGCAGGACAGGCTGACGG 62.008 66.667 23.66 14.75 0.00 4.79
820 827 2.740055 GTGCAGGACAGGCTGACG 60.740 66.667 23.66 4.44 0.00 4.35
821 828 2.359230 GGTGCAGGACAGGCTGAC 60.359 66.667 23.66 15.73 0.00 3.51
822 829 4.007644 CGGTGCAGGACAGGCTGA 62.008 66.667 23.66 0.00 0.00 4.26
823 830 2.449031 TAACGGTGCAGGACAGGCTG 62.449 60.000 14.16 14.16 0.00 4.85
824 831 2.172483 CTAACGGTGCAGGACAGGCT 62.172 60.000 0.00 0.00 0.00 4.58
825 832 1.741770 CTAACGGTGCAGGACAGGC 60.742 63.158 0.00 0.00 0.00 4.85
826 833 0.108615 CTCTAACGGTGCAGGACAGG 60.109 60.000 0.00 0.00 0.00 4.00
827 834 0.108615 CCTCTAACGGTGCAGGACAG 60.109 60.000 0.00 0.00 0.00 3.51
828 835 1.541310 CCCTCTAACGGTGCAGGACA 61.541 60.000 1.06 0.00 0.00 4.02
829 836 1.218316 CCCTCTAACGGTGCAGGAC 59.782 63.158 1.06 0.00 0.00 3.85
830 837 1.987855 CCCCTCTAACGGTGCAGGA 60.988 63.158 1.06 0.00 0.00 3.86
831 838 2.584608 CCCCTCTAACGGTGCAGG 59.415 66.667 0.00 0.00 0.00 4.85
832 839 2.125106 GCCCCTCTAACGGTGCAG 60.125 66.667 0.00 0.00 0.00 4.41
833 840 3.712907 GGCCCCTCTAACGGTGCA 61.713 66.667 0.00 0.00 0.00 4.57
834 841 4.484872 GGGCCCCTCTAACGGTGC 62.485 72.222 12.23 0.00 0.00 5.01
835 842 3.793888 GGGGCCCCTCTAACGGTG 61.794 72.222 35.49 0.00 0.00 4.94
838 845 3.537874 CTCGGGGCCCCTCTAACG 61.538 72.222 38.17 23.57 0.00 3.18
839 846 3.162154 CCTCGGGGCCCCTCTAAC 61.162 72.222 38.17 11.65 0.00 2.34
849 856 1.118356 AGCTGATCTAAGCCTCGGGG 61.118 60.000 0.00 0.00 44.68 5.73
850 857 0.316841 GAGCTGATCTAAGCCTCGGG 59.683 60.000 0.00 0.00 44.68 5.14
851 858 0.316841 GGAGCTGATCTAAGCCTCGG 59.683 60.000 0.00 0.00 44.68 4.63
852 859 1.035923 TGGAGCTGATCTAAGCCTCG 58.964 55.000 0.00 0.00 44.68 4.63
853 860 2.352617 CGATGGAGCTGATCTAAGCCTC 60.353 54.545 0.00 0.25 44.68 4.70
854 861 1.617850 CGATGGAGCTGATCTAAGCCT 59.382 52.381 0.00 0.00 44.68 4.58
855 862 1.337635 CCGATGGAGCTGATCTAAGCC 60.338 57.143 0.00 0.00 44.68 4.35
856 863 1.938926 GCCGATGGAGCTGATCTAAGC 60.939 57.143 0.00 0.00 43.88 3.09
857 864 1.668337 CGCCGATGGAGCTGATCTAAG 60.668 57.143 0.00 0.00 0.00 2.18
858 865 0.315251 CGCCGATGGAGCTGATCTAA 59.685 55.000 0.00 0.00 0.00 2.10
859 866 1.527433 CCGCCGATGGAGCTGATCTA 61.527 60.000 0.00 0.00 0.00 1.98
860 867 2.733301 CGCCGATGGAGCTGATCT 59.267 61.111 0.00 0.00 0.00 2.75
861 868 2.356793 CCGCCGATGGAGCTGATC 60.357 66.667 0.00 0.00 0.00 2.92
862 869 4.615815 GCCGCCGATGGAGCTGAT 62.616 66.667 0.00 0.00 0.00 2.90
865 872 4.408821 TTTGCCGCCGATGGAGCT 62.409 61.111 0.00 0.00 0.00 4.09
866 873 4.179579 GTTTGCCGCCGATGGAGC 62.180 66.667 0.00 0.00 0.00 4.70
867 874 2.745884 TGTTTGCCGCCGATGGAG 60.746 61.111 0.00 0.00 0.00 3.86
868 875 3.053291 GTGTTTGCCGCCGATGGA 61.053 61.111 0.00 0.00 0.00 3.41
869 876 4.114997 GGTGTTTGCCGCCGATGG 62.115 66.667 0.00 0.00 33.11 3.51
870 877 2.211619 ATTGGTGTTTGCCGCCGATG 62.212 55.000 0.00 0.00 44.70 3.84
874 881 1.080569 CTGATTGGTGTTTGCCGCC 60.081 57.895 0.00 0.00 44.53 6.13
875 882 0.387239 GTCTGATTGGTGTTTGCCGC 60.387 55.000 0.00 0.00 0.00 6.53
876 883 0.950836 TGTCTGATTGGTGTTTGCCG 59.049 50.000 0.00 0.00 0.00 5.69
877 884 1.000274 GGTGTCTGATTGGTGTTTGCC 60.000 52.381 0.00 0.00 0.00 4.52
878 885 1.334960 CGGTGTCTGATTGGTGTTTGC 60.335 52.381 0.00 0.00 0.00 3.68
879 886 1.334960 GCGGTGTCTGATTGGTGTTTG 60.335 52.381 0.00 0.00 0.00 2.93
880 887 0.951558 GCGGTGTCTGATTGGTGTTT 59.048 50.000 0.00 0.00 0.00 2.83
881 888 0.889186 GGCGGTGTCTGATTGGTGTT 60.889 55.000 0.00 0.00 0.00 3.32
882 889 1.302511 GGCGGTGTCTGATTGGTGT 60.303 57.895 0.00 0.00 0.00 4.16
883 890 2.390599 CGGCGGTGTCTGATTGGTG 61.391 63.158 0.00 0.00 0.00 4.17
884 891 2.047274 CGGCGGTGTCTGATTGGT 60.047 61.111 0.00 0.00 0.00 3.67
885 892 2.819595 CCGGCGGTGTCTGATTGG 60.820 66.667 19.97 0.00 0.00 3.16
886 893 1.811266 CTCCGGCGGTGTCTGATTG 60.811 63.158 27.32 0.00 0.00 2.67
887 894 2.579201 CTCCGGCGGTGTCTGATT 59.421 61.111 27.32 0.00 0.00 2.57
888 895 3.461773 CCTCCGGCGGTGTCTGAT 61.462 66.667 27.32 0.00 0.00 2.90
889 896 4.671590 TCCTCCGGCGGTGTCTGA 62.672 66.667 27.32 13.29 0.00 3.27
890 897 4.135153 CTCCTCCGGCGGTGTCTG 62.135 72.222 27.32 11.01 0.00 3.51
894 901 4.452733 GTTCCTCCTCCGGCGGTG 62.453 72.222 27.32 23.68 0.00 4.94
895 902 4.698625 AGTTCCTCCTCCGGCGGT 62.699 66.667 27.32 0.00 0.00 5.68
896 903 3.839432 GAGTTCCTCCTCCGGCGG 61.839 72.222 22.51 22.51 0.00 6.13
897 904 3.068691 TGAGTTCCTCCTCCGGCG 61.069 66.667 0.00 0.00 0.00 6.46
898 905 2.726351 CCTGAGTTCCTCCTCCGGC 61.726 68.421 0.00 0.00 30.50 6.13
899 906 2.726351 GCCTGAGTTCCTCCTCCGG 61.726 68.421 0.00 0.00 38.48 5.14
900 907 2.896443 GCCTGAGTTCCTCCTCCG 59.104 66.667 0.00 0.00 0.00 4.63
901 908 2.896443 CGCCTGAGTTCCTCCTCC 59.104 66.667 0.00 0.00 0.00 4.30
902 909 2.185608 GCGCCTGAGTTCCTCCTC 59.814 66.667 0.00 0.00 0.00 3.71
903 910 3.394836 GGCGCCTGAGTTCCTCCT 61.395 66.667 22.15 0.00 0.00 3.69
904 911 3.378399 GAGGCGCCTGAGTTCCTCC 62.378 68.421 38.41 12.64 39.27 4.30
905 912 2.185608 GAGGCGCCTGAGTTCCTC 59.814 66.667 38.41 13.78 38.40 3.71
906 913 2.604686 TGAGGCGCCTGAGTTCCT 60.605 61.111 38.41 7.08 0.00 3.36
907 914 2.435059 GTGAGGCGCCTGAGTTCC 60.435 66.667 38.41 19.44 0.00 3.62
908 915 2.435059 GGTGAGGCGCCTGAGTTC 60.435 66.667 38.41 20.51 0.00 3.01
909 916 4.379243 CGGTGAGGCGCCTGAGTT 62.379 66.667 38.41 10.09 0.00 3.01
917 924 3.197790 CTTGGATGCGGTGAGGCG 61.198 66.667 0.00 0.00 35.06 5.52
918 925 2.825836 CCTTGGATGCGGTGAGGC 60.826 66.667 0.00 0.00 0.00 4.70
919 926 2.671070 ACCTTGGATGCGGTGAGG 59.329 61.111 0.00 0.00 30.90 3.86
923 930 4.740822 GGCCACCTTGGATGCGGT 62.741 66.667 0.00 0.00 40.96 5.68
947 954 4.748144 CCCAGTGCCCCCTTGCTC 62.748 72.222 0.00 0.00 0.00 4.26
950 957 4.366684 GTCCCCAGTGCCCCCTTG 62.367 72.222 0.00 0.00 0.00 3.61
955 962 4.966787 TTTGCGTCCCCAGTGCCC 62.967 66.667 0.00 0.00 0.00 5.36
956 963 2.212900 GATTTTGCGTCCCCAGTGCC 62.213 60.000 0.00 0.00 0.00 5.01
957 964 1.212751 GATTTTGCGTCCCCAGTGC 59.787 57.895 0.00 0.00 0.00 4.40
958 965 0.523072 CTGATTTTGCGTCCCCAGTG 59.477 55.000 0.00 0.00 0.00 3.66
959 966 0.609131 CCTGATTTTGCGTCCCCAGT 60.609 55.000 0.00 0.00 0.00 4.00
960 967 1.315257 CCCTGATTTTGCGTCCCCAG 61.315 60.000 0.00 0.00 0.00 4.45
961 968 1.304052 CCCTGATTTTGCGTCCCCA 60.304 57.895 0.00 0.00 0.00 4.96
962 969 0.034863 TACCCTGATTTTGCGTCCCC 60.035 55.000 0.00 0.00 0.00 4.81
963 970 1.092348 GTACCCTGATTTTGCGTCCC 58.908 55.000 0.00 0.00 0.00 4.46
964 971 1.737793 CAGTACCCTGATTTTGCGTCC 59.262 52.381 0.00 0.00 41.50 4.79
965 972 1.737793 CCAGTACCCTGATTTTGCGTC 59.262 52.381 0.00 0.00 41.50 5.19
966 973 1.613255 CCCAGTACCCTGATTTTGCGT 60.613 52.381 0.00 0.00 41.50 5.24
967 974 1.094785 CCCAGTACCCTGATTTTGCG 58.905 55.000 0.00 0.00 41.50 4.85
968 975 1.005450 TCCCCAGTACCCTGATTTTGC 59.995 52.381 0.00 0.00 41.50 3.68
969 976 3.669939 ATCCCCAGTACCCTGATTTTG 57.330 47.619 0.00 0.00 41.50 2.44
978 985 2.891191 TGGTTTGAATCCCCAGTACC 57.109 50.000 0.00 0.00 0.00 3.34
983 990 3.541242 ACATCTTGGTTTGAATCCCCA 57.459 42.857 0.00 0.00 0.00 4.96
1038 1045 3.482436 TGATAAAGTGCCTCGGTTGTTT 58.518 40.909 0.00 0.00 0.00 2.83
1082 1089 1.277580 AATCTCCTCCCCTGTGCCTG 61.278 60.000 0.00 0.00 0.00 4.85
1128 1135 2.990479 GGTGGGGAGAGACGCATT 59.010 61.111 0.00 0.00 35.68 3.56
1325 1339 0.259938 GGCATGAAGGTCAAGGGGAT 59.740 55.000 0.00 0.00 0.00 3.85
1346 1360 5.163663 CCAATCTAACGCTGGAAAGCATTAA 60.164 40.000 0.00 0.00 31.38 1.40
1598 1700 1.226688 CACCGCATCAGTCGACGAT 60.227 57.895 10.46 12.86 0.00 3.73
1611 1713 4.874977 GCTCCTAGGACGCACCGC 62.875 72.222 21.42 13.61 44.74 5.68
1707 1809 8.132995 TGATACAACGCTAAAAATAGATCGAGA 58.867 33.333 0.00 0.00 0.00 4.04
1712 1814 6.982141 TCGGTGATACAACGCTAAAAATAGAT 59.018 34.615 4.26 0.00 44.89 1.98
1911 2015 4.500499 ACAGCTTCCTGCAAAGAGATAT 57.500 40.909 2.23 0.00 45.94 1.63
1983 2087 1.973281 AAGCAACTGGGTGGCATCG 60.973 57.895 0.00 0.00 34.42 3.84
2592 2706 5.750067 ACATCACAAAAGAAACTGTCATTGC 59.250 36.000 0.00 0.00 31.75 3.56
2677 2793 7.337689 ACGGAATAACCAAGGGAAAATAAGTAC 59.662 37.037 0.00 0.00 38.90 2.73
2701 2817 4.318546 GGCAAACATATTACGGAGCTTACG 60.319 45.833 9.80 9.80 37.36 3.18
2707 2823 4.747108 CAGAGAGGCAAACATATTACGGAG 59.253 45.833 0.00 0.00 0.00 4.63
2754 2871 5.697178 TGCATGGTTTCTGAATTGTTCAATG 59.303 36.000 0.00 0.00 39.58 2.82
2823 2940 4.984785 GCATTTATCTGACGTAGCTGATCA 59.015 41.667 0.00 0.00 0.00 2.92
2965 3082 2.968574 TCTTCCCAGTCCTCAGATATGC 59.031 50.000 0.00 0.00 0.00 3.14
3176 3293 2.763448 AGCTCTCTAGGCAACGAAAGAT 59.237 45.455 0.00 0.00 46.39 2.40
3179 3296 1.893137 TGAGCTCTCTAGGCAACGAAA 59.107 47.619 16.19 0.00 46.39 3.46
3216 3334 3.719268 ACTACCATTGGCATGTTCAGA 57.281 42.857 1.54 0.00 0.00 3.27
3341 3459 3.750371 TCCGTCAGTTTGGATTCACAAT 58.250 40.909 0.00 0.00 0.00 2.71
3344 3462 3.139077 ACTTCCGTCAGTTTGGATTCAC 58.861 45.455 0.00 0.00 33.42 3.18
3345 3463 3.399330 GACTTCCGTCAGTTTGGATTCA 58.601 45.455 0.00 0.00 39.98 2.57
3346 3464 2.742589 GGACTTCCGTCAGTTTGGATTC 59.257 50.000 0.00 0.00 42.05 2.52
3347 3465 2.372172 AGGACTTCCGTCAGTTTGGATT 59.628 45.455 0.00 0.00 42.05 3.01
3349 3467 1.420430 AGGACTTCCGTCAGTTTGGA 58.580 50.000 0.00 0.00 42.05 3.53
3350 3468 2.256117 AAGGACTTCCGTCAGTTTGG 57.744 50.000 0.00 0.00 42.05 3.28
3351 3469 2.287009 GCAAAGGACTTCCGTCAGTTTG 60.287 50.000 11.87 11.87 42.57 2.93
3352 3470 1.947456 GCAAAGGACTTCCGTCAGTTT 59.053 47.619 0.00 0.00 42.05 2.66
3588 3707 1.155889 CACACACACACACACACACT 58.844 50.000 0.00 0.00 0.00 3.55
3589 3708 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3590 3709 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3591 3710 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3592 3711 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3593 3712 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
3594 3713 1.872468 GCACACACACACACACACA 59.128 52.632 0.00 0.00 0.00 3.72
3595 3714 1.225991 CGCACACACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
3596 3715 3.033166 GCGCACACACACACACACA 62.033 57.895 0.30 0.00 0.00 3.72
3597 3716 2.277247 GCGCACACACACACACAC 60.277 61.111 0.30 0.00 0.00 3.82
3598 3717 3.858989 CGCGCACACACACACACA 61.859 61.111 8.75 0.00 0.00 3.72
3645 3764 4.312231 ACACATGCACGCACGCAC 62.312 61.111 0.00 0.00 46.56 5.34
3647 3766 4.312231 ACACACATGCACGCACGC 62.312 61.111 0.00 0.00 0.00 5.34
3648 3767 2.425610 CACACACATGCACGCACG 60.426 61.111 0.00 0.00 0.00 5.34
3649 3768 1.655046 CACACACACATGCACGCAC 60.655 57.895 0.00 0.00 0.00 5.34
3650 3769 2.111582 ACACACACACATGCACGCA 61.112 52.632 0.00 0.00 0.00 5.24
3651 3770 1.655046 CACACACACACATGCACGC 60.655 57.895 0.00 0.00 0.00 5.34
3652 3771 0.589479 CACACACACACACATGCACG 60.589 55.000 0.00 0.00 0.00 5.34
3653 3772 0.451383 ACACACACACACACATGCAC 59.549 50.000 0.00 0.00 0.00 4.57
3654 3773 0.450983 CACACACACACACACATGCA 59.549 50.000 0.00 0.00 0.00 3.96
3655 3774 0.451383 ACACACACACACACACATGC 59.549 50.000 0.00 0.00 0.00 4.06
3656 3775 1.468127 ACACACACACACACACACATG 59.532 47.619 0.00 0.00 0.00 3.21
3657 3776 1.468127 CACACACACACACACACACAT 59.532 47.619 0.00 0.00 0.00 3.21
3658 3777 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3659 3778 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3660 3779 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3661 3780 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3662 3781 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3663 3782 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3664 3783 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3665 3784 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3666 3785 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3667 3786 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3668 3787 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
3669 3788 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
3711 3830 7.977853 TGACTAGTGAAGAACGAAAAGTTTAGT 59.022 33.333 0.00 0.00 44.35 2.24
3883 4002 4.701651 AAAAAGAAACGGAGGGAGTACT 57.298 40.909 0.00 0.00 0.00 2.73
3884 4003 5.545588 ACTAAAAAGAAACGGAGGGAGTAC 58.454 41.667 0.00 0.00 0.00 2.73
3885 4004 5.541484 AGACTAAAAAGAAACGGAGGGAGTA 59.459 40.000 0.00 0.00 0.00 2.59
3886 4005 4.347292 AGACTAAAAAGAAACGGAGGGAGT 59.653 41.667 0.00 0.00 0.00 3.85
3887 4006 4.691216 CAGACTAAAAAGAAACGGAGGGAG 59.309 45.833 0.00 0.00 0.00 4.30
3888 4007 4.638304 CAGACTAAAAAGAAACGGAGGGA 58.362 43.478 0.00 0.00 0.00 4.20
3889 4008 3.188667 GCAGACTAAAAAGAAACGGAGGG 59.811 47.826 0.00 0.00 0.00 4.30
3890 4009 3.813166 TGCAGACTAAAAAGAAACGGAGG 59.187 43.478 0.00 0.00 0.00 4.30
3891 4010 5.613358 ATGCAGACTAAAAAGAAACGGAG 57.387 39.130 0.00 0.00 0.00 4.63
3892 4011 8.780846 TTATATGCAGACTAAAAAGAAACGGA 57.219 30.769 0.00 0.00 0.00 4.69
3893 4012 8.122952 CCTTATATGCAGACTAAAAAGAAACGG 58.877 37.037 0.00 0.00 0.00 4.44
3894 4013 8.665685 ACCTTATATGCAGACTAAAAAGAAACG 58.334 33.333 0.00 0.00 0.00 3.60
3898 4017 8.956426 CCAAACCTTATATGCAGACTAAAAAGA 58.044 33.333 0.00 0.00 0.00 2.52
3899 4018 8.739972 ACCAAACCTTATATGCAGACTAAAAAG 58.260 33.333 0.00 0.00 0.00 2.27
3900 4019 8.644374 ACCAAACCTTATATGCAGACTAAAAA 57.356 30.769 0.00 0.00 0.00 1.94
3901 4020 7.885922 TGACCAAACCTTATATGCAGACTAAAA 59.114 33.333 0.00 0.00 0.00 1.52
3902 4021 7.398829 TGACCAAACCTTATATGCAGACTAAA 58.601 34.615 0.00 0.00 0.00 1.85
3903 4022 6.953101 TGACCAAACCTTATATGCAGACTAA 58.047 36.000 0.00 0.00 0.00 2.24
3904 4023 6.553953 TGACCAAACCTTATATGCAGACTA 57.446 37.500 0.00 0.00 0.00 2.59
3905 4024 5.435686 TGACCAAACCTTATATGCAGACT 57.564 39.130 0.00 0.00 0.00 3.24
3906 4025 6.151144 ACTTTGACCAAACCTTATATGCAGAC 59.849 38.462 0.00 0.00 0.00 3.51
3907 4026 6.245408 ACTTTGACCAAACCTTATATGCAGA 58.755 36.000 0.00 0.00 0.00 4.26
3908 4027 6.150976 TGACTTTGACCAAACCTTATATGCAG 59.849 38.462 0.00 0.00 0.00 4.41
3909 4028 6.007076 TGACTTTGACCAAACCTTATATGCA 58.993 36.000 0.00 0.00 0.00 3.96
3910 4029 6.509418 TGACTTTGACCAAACCTTATATGC 57.491 37.500 0.00 0.00 0.00 3.14
3911 4030 7.029563 GCTTGACTTTGACCAAACCTTATATG 58.970 38.462 0.00 0.00 0.00 1.78
3912 4031 6.948309 AGCTTGACTTTGACCAAACCTTATAT 59.052 34.615 0.00 0.00 0.00 0.86
3913 4032 6.303839 AGCTTGACTTTGACCAAACCTTATA 58.696 36.000 0.00 0.00 0.00 0.98
3914 4033 5.140454 AGCTTGACTTTGACCAAACCTTAT 58.860 37.500 0.00 0.00 0.00 1.73
3915 4034 4.532834 AGCTTGACTTTGACCAAACCTTA 58.467 39.130 0.00 0.00 0.00 2.69
3916 4035 3.365472 AGCTTGACTTTGACCAAACCTT 58.635 40.909 0.00 0.00 0.00 3.50
3917 4036 3.018423 AGCTTGACTTTGACCAAACCT 57.982 42.857 0.00 0.00 0.00 3.50
3918 4037 3.801114 AAGCTTGACTTTGACCAAACC 57.199 42.857 0.00 0.00 33.71 3.27
3928 4047 6.116126 AGTCAAACTCTACAAAGCTTGACTT 58.884 36.000 13.94 3.16 41.70 3.01
3929 4048 5.675538 AGTCAAACTCTACAAAGCTTGACT 58.324 37.500 13.94 13.94 0.00 3.41
3930 4049 5.993106 AGTCAAACTCTACAAAGCTTGAC 57.007 39.130 0.00 10.63 0.00 3.18
3931 4050 7.272978 AGTTAGTCAAACTCTACAAAGCTTGA 58.727 34.615 0.00 0.00 45.64 3.02
3932 4051 7.484035 AGTTAGTCAAACTCTACAAAGCTTG 57.516 36.000 0.00 0.00 45.64 4.01
3993 4112 9.281075 CGTTTCATGGTGCATATGATAATATTG 57.719 33.333 6.97 0.00 34.76 1.90
3994 4113 9.013229 ACGTTTCATGGTGCATATGATAATATT 57.987 29.630 6.97 0.00 34.76 1.28
3995 4114 8.565896 ACGTTTCATGGTGCATATGATAATAT 57.434 30.769 6.97 0.00 34.76 1.28
3996 4115 7.977789 ACGTTTCATGGTGCATATGATAATA 57.022 32.000 6.97 1.19 34.76 0.98
3997 4116 6.882610 ACGTTTCATGGTGCATATGATAAT 57.117 33.333 6.97 3.39 34.76 1.28
3998 4117 7.977789 ATACGTTTCATGGTGCATATGATAA 57.022 32.000 6.97 10.39 34.76 1.75
3999 4118 7.977789 AATACGTTTCATGGTGCATATGATA 57.022 32.000 6.97 9.28 34.76 2.15
4000 4119 6.882610 AATACGTTTCATGGTGCATATGAT 57.117 33.333 6.97 5.58 34.76 2.45
4001 4120 6.691754 AAATACGTTTCATGGTGCATATGA 57.308 33.333 6.97 11.28 33.00 2.15
4002 4121 7.380438 GAAAATACGTTTCATGGTGCATATG 57.620 36.000 0.00 0.00 44.42 1.78
4071 4190 9.930693 AAACTACACAAAGTTTGACCAAATTTA 57.069 25.926 22.23 0.00 45.60 1.40
4072 4191 8.840833 AAACTACACAAAGTTTGACCAAATTT 57.159 26.923 22.23 11.30 45.60 1.82
4083 4202 8.113173 TGGTTAAAGTCAAACTACACAAAGTT 57.887 30.769 0.00 0.00 41.46 2.66
4084 4203 7.690952 TGGTTAAAGTCAAACTACACAAAGT 57.309 32.000 0.00 0.00 0.00 2.66
4085 4204 8.973835 TTTGGTTAAAGTCAAACTACACAAAG 57.026 30.769 0.00 0.00 0.00 2.77
4086 4205 9.575783 GATTTGGTTAAAGTCAAACTACACAAA 57.424 29.630 0.00 0.00 35.97 2.83
4087 4206 8.962679 AGATTTGGTTAAAGTCAAACTACACAA 58.037 29.630 0.00 0.00 35.97 3.33
4088 4207 8.514330 AGATTTGGTTAAAGTCAAACTACACA 57.486 30.769 0.00 0.00 35.97 3.72
4095 4214 9.781834 CGCATATAAGATTTGGTTAAAGTCAAA 57.218 29.630 0.00 0.00 37.29 2.69
4096 4215 8.402472 CCGCATATAAGATTTGGTTAAAGTCAA 58.598 33.333 0.00 0.00 0.00 3.18
4097 4216 7.771361 TCCGCATATAAGATTTGGTTAAAGTCA 59.229 33.333 0.00 0.00 0.00 3.41
4098 4217 8.149973 TCCGCATATAAGATTTGGTTAAAGTC 57.850 34.615 0.00 0.00 0.00 3.01
4099 4218 7.773690 ACTCCGCATATAAGATTTGGTTAAAGT 59.226 33.333 0.00 0.00 0.00 2.66
4100 4219 8.154649 ACTCCGCATATAAGATTTGGTTAAAG 57.845 34.615 0.00 0.00 0.00 1.85
4101 4220 9.616156 TTACTCCGCATATAAGATTTGGTTAAA 57.384 29.630 0.00 0.00 0.00 1.52
4102 4221 9.616156 TTTACTCCGCATATAAGATTTGGTTAA 57.384 29.630 0.00 0.00 0.00 2.01
4103 4222 9.616156 TTTTACTCCGCATATAAGATTTGGTTA 57.384 29.630 0.00 0.00 0.00 2.85
4104 4223 8.514330 TTTTACTCCGCATATAAGATTTGGTT 57.486 30.769 0.00 0.00 0.00 3.67
4105 4224 8.514330 TTTTTACTCCGCATATAAGATTTGGT 57.486 30.769 0.00 0.00 0.00 3.67
4106 4225 8.836413 TCTTTTTACTCCGCATATAAGATTTGG 58.164 33.333 0.00 0.00 0.00 3.28
4110 4229 8.548721 CGTTTCTTTTTACTCCGCATATAAGAT 58.451 33.333 0.00 0.00 0.00 2.40
4111 4230 7.010738 CCGTTTCTTTTTACTCCGCATATAAGA 59.989 37.037 0.00 0.00 0.00 2.10
4112 4231 7.010738 TCCGTTTCTTTTTACTCCGCATATAAG 59.989 37.037 0.00 0.00 0.00 1.73
4113 4232 6.817641 TCCGTTTCTTTTTACTCCGCATATAA 59.182 34.615 0.00 0.00 0.00 0.98
4114 4233 6.339730 TCCGTTTCTTTTTACTCCGCATATA 58.660 36.000 0.00 0.00 0.00 0.86
4115 4234 5.180271 TCCGTTTCTTTTTACTCCGCATAT 58.820 37.500 0.00 0.00 0.00 1.78
4116 4235 4.567971 TCCGTTTCTTTTTACTCCGCATA 58.432 39.130 0.00 0.00 0.00 3.14
4117 4236 3.404899 TCCGTTTCTTTTTACTCCGCAT 58.595 40.909 0.00 0.00 0.00 4.73
4118 4237 2.803956 CTCCGTTTCTTTTTACTCCGCA 59.196 45.455 0.00 0.00 0.00 5.69
4119 4238 2.159037 CCTCCGTTTCTTTTTACTCCGC 59.841 50.000 0.00 0.00 0.00 5.54
4120 4239 2.740447 CCCTCCGTTTCTTTTTACTCCG 59.260 50.000 0.00 0.00 0.00 4.63
4121 4240 4.001652 CTCCCTCCGTTTCTTTTTACTCC 58.998 47.826 0.00 0.00 0.00 3.85
4122 4241 4.639334 ACTCCCTCCGTTTCTTTTTACTC 58.361 43.478 0.00 0.00 0.00 2.59
4123 4242 4.701651 ACTCCCTCCGTTTCTTTTTACT 57.298 40.909 0.00 0.00 0.00 2.24
4124 4243 5.299949 TGTACTCCCTCCGTTTCTTTTTAC 58.700 41.667 0.00 0.00 0.00 2.01
4125 4244 5.549742 TGTACTCCCTCCGTTTCTTTTTA 57.450 39.130 0.00 0.00 0.00 1.52
4126 4245 4.426736 TGTACTCCCTCCGTTTCTTTTT 57.573 40.909 0.00 0.00 0.00 1.94
4127 4246 4.426736 TTGTACTCCCTCCGTTTCTTTT 57.573 40.909 0.00 0.00 0.00 2.27
4128 4247 4.132336 GTTTGTACTCCCTCCGTTTCTTT 58.868 43.478 0.00 0.00 0.00 2.52
4129 4248 3.736720 GTTTGTACTCCCTCCGTTTCTT 58.263 45.455 0.00 0.00 0.00 2.52
4130 4249 2.288640 CGTTTGTACTCCCTCCGTTTCT 60.289 50.000 0.00 0.00 0.00 2.52
4131 4250 2.064014 CGTTTGTACTCCCTCCGTTTC 58.936 52.381 0.00 0.00 0.00 2.78
4132 4251 1.688197 TCGTTTGTACTCCCTCCGTTT 59.312 47.619 0.00 0.00 0.00 3.60
4133 4252 1.331214 TCGTTTGTACTCCCTCCGTT 58.669 50.000 0.00 0.00 0.00 4.44
4134 4253 1.331214 TTCGTTTGTACTCCCTCCGT 58.669 50.000 0.00 0.00 0.00 4.69
4135 4254 2.443887 TTTCGTTTGTACTCCCTCCG 57.556 50.000 0.00 0.00 0.00 4.63
4136 4255 3.268330 GGATTTCGTTTGTACTCCCTCC 58.732 50.000 0.00 0.00 0.00 4.30
4137 4256 3.933332 CTGGATTTCGTTTGTACTCCCTC 59.067 47.826 0.00 0.00 0.00 4.30
4138 4257 3.868754 GCTGGATTTCGTTTGTACTCCCT 60.869 47.826 0.00 0.00 0.00 4.20
4139 4258 2.418976 GCTGGATTTCGTTTGTACTCCC 59.581 50.000 0.00 0.00 0.00 4.30
4140 4259 3.335579 AGCTGGATTTCGTTTGTACTCC 58.664 45.455 0.00 0.00 0.00 3.85
4141 4260 5.358298 AAAGCTGGATTTCGTTTGTACTC 57.642 39.130 0.00 0.00 0.00 2.59
4366 4487 7.068839 TGAGAGACTTCTACTGTGTTCTTCTTT 59.931 37.037 0.00 0.00 32.53 2.52
4462 4583 3.454375 TGTGACTCGACACCTTCTTTTC 58.546 45.455 3.94 0.00 39.69 2.29
4497 4618 6.727594 GGACAGTCCTTCCACGTATGTACG 62.728 54.167 12.94 10.73 43.50 3.67
4505 4626 0.898320 ATCTGGACAGTCCTTCCACG 59.102 55.000 20.82 2.77 38.28 4.94
4530 4651 2.919387 GCTGTCGTGTTAGCACTTACGA 60.919 50.000 8.15 0.00 43.16 3.43
4547 4668 3.144506 CTGAGTCATCACCAAAAGCTGT 58.855 45.455 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.