Multiple sequence alignment - TraesCS5B01G172300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G172300 chr5B 100.000 6137 0 0 1 6137 316618931 316625067 0.000000e+00 11334.0
1 TraesCS5B01G172300 chr5B 86.061 825 100 9 5314 6137 707355339 707354529 0.000000e+00 872.0
2 TraesCS5B01G172300 chr5B 85.818 825 110 6 5314 6137 707313380 707312562 0.000000e+00 869.0
3 TraesCS5B01G172300 chr5D 94.017 1755 77 15 3546 5287 278466656 278468395 0.000000e+00 2634.0
4 TraesCS5B01G172300 chr5D 91.339 1016 64 11 431 1436 278462713 278463714 0.000000e+00 1367.0
5 TraesCS5B01G172300 chr5D 93.405 743 40 7 2463 3202 278465487 278466223 0.000000e+00 1092.0
6 TraesCS5B01G172300 chr5D 86.532 297 27 4 1 297 278447508 278447791 1.280000e-81 315.0
7 TraesCS5B01G172300 chr5D 88.288 111 13 0 1724 1834 278465367 278465477 3.860000e-27 134.0
8 TraesCS5B01G172300 chr5D 89.333 75 3 4 1432 1506 278464945 278465014 8.470000e-14 89.8
9 TraesCS5B01G172300 chr5A 93.762 1571 71 9 3645 5214 370098007 370096463 0.000000e+00 2333.0
10 TraesCS5B01G172300 chr5A 93.239 1065 54 8 456 1513 370102432 370101379 0.000000e+00 1552.0
11 TraesCS5B01G172300 chr5A 93.689 919 48 2 4294 5212 370042404 370043312 0.000000e+00 1367.0
12 TraesCS5B01G172300 chr5A 92.181 729 42 8 2467 3189 370100143 370099424 0.000000e+00 1016.0
13 TraesCS5B01G172300 chr5A 85.644 808 80 27 1695 2478 370101344 370100549 0.000000e+00 817.0
14 TraesCS5B01G172300 chr5A 90.573 541 35 5 3744 4284 370036495 370037019 0.000000e+00 702.0
15 TraesCS5B01G172300 chr5A 89.883 257 24 1 1 257 370103256 370103002 4.590000e-86 329.0
16 TraesCS5B01G172300 chr3B 89.855 828 83 1 5310 6137 814146084 814145258 0.000000e+00 1062.0
17 TraesCS5B01G172300 chr4B 88.647 828 91 3 5310 6137 613827366 613828190 0.000000e+00 1005.0
18 TraesCS5B01G172300 chr4B 86.303 825 108 3 5314 6137 637458477 637457657 0.000000e+00 893.0
19 TraesCS5B01G172300 chr2D 81.585 820 148 3 5318 6135 427979742 427980560 0.000000e+00 675.0
20 TraesCS5B01G172300 chr2D 80.637 754 144 2 5318 6070 572019094 572019846 3.190000e-162 582.0
21 TraesCS5B01G172300 chr2D 100.000 28 0 0 313 340 26614683 26614710 1.100000e-02 52.8
22 TraesCS5B01G172300 chr7D 82.075 742 129 4 5319 6058 107012151 107012890 1.120000e-176 630.0
23 TraesCS5B01G172300 chr6D 80.657 791 149 4 5318 6106 70649348 70648560 1.460000e-170 610.0
24 TraesCS5B01G172300 chr6D 78.390 236 43 7 4458 4692 369661951 369661723 4.960000e-31 147.0
25 TraesCS5B01G172300 chr6A 79.661 236 40 7 4458 4692 510865765 510865537 4.920000e-36 163.0
26 TraesCS5B01G172300 chr6B 77.119 236 46 6 4458 4692 555294091 555293863 4.990000e-26 130.0
27 TraesCS5B01G172300 chr2B 100.000 45 0 0 296 340 41958871 41958915 3.940000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G172300 chr5B 316618931 316625067 6136 False 11334.00 11334 100.0000 1 6137 1 chr5B.!!$F1 6136
1 TraesCS5B01G172300 chr5B 707354529 707355339 810 True 872.00 872 86.0610 5314 6137 1 chr5B.!!$R2 823
2 TraesCS5B01G172300 chr5B 707312562 707313380 818 True 869.00 869 85.8180 5314 6137 1 chr5B.!!$R1 823
3 TraesCS5B01G172300 chr5D 278462713 278468395 5682 False 1063.36 2634 91.2764 431 5287 5 chr5D.!!$F2 4856
4 TraesCS5B01G172300 chr5A 370042404 370043312 908 False 1367.00 1367 93.6890 4294 5212 1 chr5A.!!$F2 918
5 TraesCS5B01G172300 chr5A 370096463 370103256 6793 True 1209.40 2333 90.9418 1 5214 5 chr5A.!!$R1 5213
6 TraesCS5B01G172300 chr5A 370036495 370037019 524 False 702.00 702 90.5730 3744 4284 1 chr5A.!!$F1 540
7 TraesCS5B01G172300 chr3B 814145258 814146084 826 True 1062.00 1062 89.8550 5310 6137 1 chr3B.!!$R1 827
8 TraesCS5B01G172300 chr4B 613827366 613828190 824 False 1005.00 1005 88.6470 5310 6137 1 chr4B.!!$F1 827
9 TraesCS5B01G172300 chr4B 637457657 637458477 820 True 893.00 893 86.3030 5314 6137 1 chr4B.!!$R1 823
10 TraesCS5B01G172300 chr2D 427979742 427980560 818 False 675.00 675 81.5850 5318 6135 1 chr2D.!!$F2 817
11 TraesCS5B01G172300 chr2D 572019094 572019846 752 False 582.00 582 80.6370 5318 6070 1 chr2D.!!$F3 752
12 TraesCS5B01G172300 chr7D 107012151 107012890 739 False 630.00 630 82.0750 5319 6058 1 chr7D.!!$F1 739
13 TraesCS5B01G172300 chr6D 70648560 70649348 788 True 610.00 610 80.6570 5318 6106 1 chr6D.!!$R1 788

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
238 239 0.107508 AGTGACTGCAGCTGTGTTGT 60.108 50.0 15.27 9.0 0.00 3.32 F
1966 3777 0.104120 CCAGATGCATTGCACCATGG 59.896 55.0 14.66 17.2 43.04 3.66 F
2706 4969 0.105224 TCTGGTTTCGGTTTCTGCGA 59.895 50.0 0.00 0.0 0.00 5.10 F
2824 5087 0.179029 CCAACCCCGTGATCCCATAC 60.179 60.0 0.00 0.0 0.00 2.39 F
3260 5541 0.250252 TCTGCATCAGAACGTGCCAA 60.250 50.0 0.00 0.0 37.57 4.52 F
3700 7071 0.250901 TCAAGTTCTTGCTGCCCCTC 60.251 55.0 7.58 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1976 3820 0.321671 ACACGTTGACCAGGAGGATG 59.678 55.000 0.0 0.0 38.69 3.51 R
3297 5578 0.028902 GCTACGCCCCGCTTAAATTG 59.971 55.000 0.0 0.0 0.00 2.32 R
3991 7366 0.032813 CTGCCCAAATGGACCCAGAT 60.033 55.000 0.0 0.0 37.39 2.90 R
4062 7451 0.320374 TCCGATCCAAACGCTCAACT 59.680 50.000 0.0 0.0 0.00 3.16 R
4692 8081 1.132643 GACGACACGTAGATGAAGCCT 59.867 52.381 0.0 0.0 41.37 4.58 R
5304 8697 0.031178 GCACTTGCACTTGGACTTGG 59.969 55.000 0.0 0.0 41.59 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.961062 CCAATTCCCTAAGGCCAATGAG 59.039 50.000 5.01 0.00 0.00 2.90
39 40 3.373001 CCAATTCCCTAAGGCCAATGAGA 60.373 47.826 5.01 0.00 0.00 3.27
49 50 2.507058 AGGCCAATGAGACTGCTTGATA 59.493 45.455 5.01 0.00 0.00 2.15
67 68 6.143438 GCTTGATACAGCATTGCAATATTCAC 59.857 38.462 12.53 0.00 39.83 3.18
73 74 4.038763 CAGCATTGCAATATTCACTCCCAT 59.961 41.667 12.53 0.00 0.00 4.00
74 75 4.280174 AGCATTGCAATATTCACTCCCATC 59.720 41.667 12.53 0.00 0.00 3.51
79 80 3.824133 CAATATTCACTCCCATCTGCCA 58.176 45.455 0.00 0.00 0.00 4.92
108 109 4.055360 TCCAATATCAAACGCAGATACCG 58.945 43.478 0.00 0.00 31.32 4.02
116 117 1.688772 ACGCAGATACCGGTGATACT 58.311 50.000 19.93 8.08 0.00 2.12
125 126 3.221964 ACCGGTGATACTGTTCGTAAC 57.778 47.619 6.12 0.00 0.00 2.50
174 175 3.030291 TGGTTGGAGCAACACTTGAAAT 58.970 40.909 0.00 0.00 45.11 2.17
178 179 4.503741 TGGAGCAACACTTGAAATTAGC 57.496 40.909 0.00 0.00 0.00 3.09
179 180 4.144297 TGGAGCAACACTTGAAATTAGCT 58.856 39.130 0.00 0.00 0.00 3.32
189 190 7.765307 ACACTTGAAATTAGCTGTATTCATGG 58.235 34.615 18.48 13.27 33.62 3.66
192 193 6.603237 TGAAATTAGCTGTATTCATGGACG 57.397 37.500 0.00 0.00 0.00 4.79
201 202 2.806945 ATTCATGGACGGTGTGGATT 57.193 45.000 0.00 0.00 0.00 3.01
204 205 1.086696 CATGGACGGTGTGGATTGTC 58.913 55.000 0.00 0.00 0.00 3.18
216 217 3.826157 TGTGGATTGTCTGTTCCAAATCC 59.174 43.478 6.37 6.37 43.42 3.01
217 218 3.826157 GTGGATTGTCTGTTCCAAATCCA 59.174 43.478 11.03 11.03 43.42 3.41
227 228 1.896220 TCCAAATCCACAGTGACTGC 58.104 50.000 13.37 0.00 34.37 4.40
238 239 0.107508 AGTGACTGCAGCTGTGTTGT 60.108 50.000 15.27 9.00 0.00 3.32
251 252 3.925913 GCTGTGTTGTTTCAAAAGCTTCA 59.074 39.130 0.00 0.00 0.00 3.02
257 258 7.653713 TGTGTTGTTTCAAAAGCTTCAAAACTA 59.346 29.630 21.78 15.97 32.44 2.24
259 260 8.085296 TGTTGTTTCAAAAGCTTCAAAACTAGA 58.915 29.630 21.78 14.97 32.44 2.43
260 261 8.373256 GTTGTTTCAAAAGCTTCAAAACTAGAC 58.627 33.333 21.78 16.43 32.44 2.59
261 262 6.745450 TGTTTCAAAAGCTTCAAAACTAGACG 59.255 34.615 21.78 0.00 32.44 4.18
262 263 6.431198 TTCAAAAGCTTCAAAACTAGACGT 57.569 33.333 0.00 0.00 0.00 4.34
263 264 6.044512 TCAAAAGCTTCAAAACTAGACGTC 57.955 37.500 7.70 7.70 0.00 4.34
264 265 5.007332 TCAAAAGCTTCAAAACTAGACGTCC 59.993 40.000 13.01 0.00 0.00 4.79
265 266 3.746045 AGCTTCAAAACTAGACGTCCA 57.254 42.857 13.01 0.00 0.00 4.02
266 267 4.067972 AGCTTCAAAACTAGACGTCCAA 57.932 40.909 13.01 0.00 0.00 3.53
267 268 4.642429 AGCTTCAAAACTAGACGTCCAAT 58.358 39.130 13.01 0.00 0.00 3.16
268 269 5.063880 AGCTTCAAAACTAGACGTCCAATT 58.936 37.500 13.01 0.53 0.00 2.32
269 270 5.531287 AGCTTCAAAACTAGACGTCCAATTT 59.469 36.000 13.01 7.30 0.00 1.82
270 271 6.039382 AGCTTCAAAACTAGACGTCCAATTTT 59.961 34.615 13.01 12.91 0.00 1.82
271 272 6.695713 GCTTCAAAACTAGACGTCCAATTTTT 59.304 34.615 13.01 10.73 0.00 1.94
272 273 7.858879 GCTTCAAAACTAGACGTCCAATTTTTA 59.141 33.333 13.01 5.38 0.00 1.52
273 274 9.166126 CTTCAAAACTAGACGTCCAATTTTTAC 57.834 33.333 13.01 0.00 0.00 2.01
274 275 8.211116 TCAAAACTAGACGTCCAATTTTTACA 57.789 30.769 13.01 2.35 0.00 2.41
275 276 8.124199 TCAAAACTAGACGTCCAATTTTTACAC 58.876 33.333 13.01 0.00 0.00 2.90
276 277 7.556733 AAACTAGACGTCCAATTTTTACACA 57.443 32.000 13.01 0.00 0.00 3.72
277 278 7.556733 AACTAGACGTCCAATTTTTACACAA 57.443 32.000 13.01 0.00 0.00 3.33
278 279 7.186021 ACTAGACGTCCAATTTTTACACAAG 57.814 36.000 13.01 0.00 0.00 3.16
279 280 4.855531 AGACGTCCAATTTTTACACAAGC 58.144 39.130 13.01 0.00 0.00 4.01
292 293 2.851195 ACACAAGCGAAATGAAGACCT 58.149 42.857 0.00 0.00 0.00 3.85
346 407 6.422776 AAGTATGTAAATTTCTCTGTGCCG 57.577 37.500 0.00 0.00 0.00 5.69
356 417 0.532862 CTCTGTGCCGGTTGAACACT 60.533 55.000 1.90 0.00 35.33 3.55
375 436 5.706447 ACACTCCTACATCAGATAGCCTTA 58.294 41.667 0.00 0.00 0.00 2.69
376 437 5.536916 ACACTCCTACATCAGATAGCCTTAC 59.463 44.000 0.00 0.00 0.00 2.34
377 438 5.047660 CACTCCTACATCAGATAGCCTTACC 60.048 48.000 0.00 0.00 0.00 2.85
378 439 5.162925 ACTCCTACATCAGATAGCCTTACCT 60.163 44.000 0.00 0.00 0.00 3.08
379 440 5.080337 TCCTACATCAGATAGCCTTACCTG 58.920 45.833 0.00 0.00 0.00 4.00
381 442 3.658725 ACATCAGATAGCCTTACCTGGT 58.341 45.455 4.05 4.05 0.00 4.00
382 443 4.816126 ACATCAGATAGCCTTACCTGGTA 58.184 43.478 1.49 1.49 0.00 3.25
384 445 5.665812 ACATCAGATAGCCTTACCTGGTAAA 59.334 40.000 19.18 6.01 0.00 2.01
387 448 7.208064 TCAGATAGCCTTACCTGGTAAATTT 57.792 36.000 19.18 10.22 0.00 1.82
388 449 7.280356 TCAGATAGCCTTACCTGGTAAATTTC 58.720 38.462 19.18 12.36 0.00 2.17
390 451 7.721399 CAGATAGCCTTACCTGGTAAATTTCAT 59.279 37.037 19.18 9.59 0.00 2.57
391 452 7.721399 AGATAGCCTTACCTGGTAAATTTCATG 59.279 37.037 19.18 6.74 0.00 3.07
392 453 5.580022 AGCCTTACCTGGTAAATTTCATGT 58.420 37.500 19.18 0.00 0.00 3.21
395 464 6.589907 GCCTTACCTGGTAAATTTCATGTTTG 59.410 38.462 19.18 4.33 0.00 2.93
399 468 5.245977 ACCTGGTAAATTTCATGTTTGGAGG 59.754 40.000 0.00 0.00 0.00 4.30
409 478 3.136443 TCATGTTTGGAGGAACAGACTGT 59.864 43.478 1.07 1.07 42.28 3.55
413 482 4.879545 TGTTTGGAGGAACAGACTGTAAAC 59.120 41.667 8.91 14.14 34.77 2.01
415 484 6.126997 TGTTTGGAGGAACAGACTGTAAACTA 60.127 38.462 21.35 11.20 34.77 2.24
418 487 5.364446 TGGAGGAACAGACTGTAAACTACAA 59.636 40.000 8.91 0.00 38.38 2.41
419 488 5.695363 GGAGGAACAGACTGTAAACTACAAC 59.305 44.000 8.91 0.00 38.38 3.32
427 496 7.652507 ACAGACTGTAAACTACAACTCTAAAGC 59.347 37.037 6.24 0.00 38.38 3.51
450 773 6.939163 AGCAATTAGATCATGGAAGTATGGAC 59.061 38.462 0.00 0.00 0.00 4.02
464 870 6.326843 GGAAGTATGGACCTAACCAATAGTCT 59.673 42.308 0.00 0.00 43.47 3.24
471 877 3.947834 ACCTAACCAATAGTCTGCATTGC 59.052 43.478 0.46 0.46 33.00 3.56
509 915 3.265479 AGAAGTTCAAATCTAGGCCTGCT 59.735 43.478 17.99 0.00 0.00 4.24
738 1144 5.925969 GCTTCTAGGAATAAGATCAGCACTC 59.074 44.000 0.00 0.00 30.52 3.51
771 1177 2.417097 GCACTTTGTGGCGCCTTT 59.583 55.556 29.70 1.80 33.64 3.11
823 1232 3.402628 TCAACAGACTAAGGAACTGCC 57.597 47.619 0.00 0.00 40.86 4.85
828 1237 1.552792 AGACTAAGGAACTGCCAGAGC 59.447 52.381 0.00 0.00 40.86 4.09
930 1343 4.522022 AGGATCATAGCTAAAAATGGCTGC 59.478 41.667 0.00 0.00 39.31 5.25
933 1346 4.525996 TCATAGCTAAAAATGGCTGCTCA 58.474 39.130 0.00 0.00 39.31 4.26
934 1347 4.336433 TCATAGCTAAAAATGGCTGCTCAC 59.664 41.667 0.00 0.00 39.31 3.51
942 1355 3.920231 AATGGCTGCTCACTCATAAGA 57.080 42.857 0.00 0.00 0.00 2.10
946 1359 1.202627 GCTGCTCACTCATAAGAGGGG 60.203 57.143 0.00 0.00 45.67 4.79
955 1368 2.697751 CTCATAAGAGGGGACACAGGAG 59.302 54.545 0.00 0.00 38.26 3.69
993 1406 3.703001 TCTCCCAGAAGTTGAATCCAC 57.297 47.619 0.00 0.00 0.00 4.02
995 1408 1.697432 TCCCAGAAGTTGAATCCACGT 59.303 47.619 0.00 0.00 0.00 4.49
1041 1454 2.734673 GAAGAGCGTGCCGAAGCTG 61.735 63.158 0.00 0.00 44.69 4.24
1134 1547 8.801882 TTTAGTTTCTCCTCTCTTTGTTTTCA 57.198 30.769 0.00 0.00 0.00 2.69
1260 1678 3.554324 GCAAACTTGATACCGAAGCGATA 59.446 43.478 0.00 0.00 0.00 2.92
1339 1757 2.968574 TGGCCTTGAATACCAAAGCAAA 59.031 40.909 3.32 0.00 42.53 3.68
1358 1776 5.595952 AGCAAAGTTCTTTGTTTGGAGATCT 59.404 36.000 21.20 0.00 34.75 2.75
1364 1782 5.310409 TCTTTGTTTGGAGATCTCAAGGT 57.690 39.130 23.85 0.00 0.00 3.50
1389 1807 1.136147 GCTGTGCAGAATTCTGGCG 59.864 57.895 31.41 11.65 43.94 5.69
1413 1831 6.420903 CGCCAGAATTCATCGTTTCTCTAATA 59.579 38.462 8.44 0.00 29.85 0.98
1476 3129 6.090088 CCTGAAACTGAGATTTCTCGTTACTG 59.910 42.308 13.94 9.21 45.72 2.74
1477 3130 6.745116 TGAAACTGAGATTTCTCGTTACTGA 58.255 36.000 13.94 0.00 45.72 3.41
1478 3131 6.641314 TGAAACTGAGATTTCTCGTTACTGAC 59.359 38.462 13.94 7.81 45.72 3.51
1479 3132 8.462910 TGAAACTGAGATTTCTCGTTACTGACG 61.463 40.741 13.94 0.00 45.72 4.35
1494 3147 7.672738 CGTTACTGACGCTGTATTATTTTCTT 58.327 34.615 0.00 0.00 45.86 2.52
1499 3152 8.730680 ACTGACGCTGTATTATTTTCTTGAAAT 58.269 29.630 0.00 0.00 40.88 2.17
1591 3342 5.417580 ACGCATTGAGAAAATAGCCCTTTTA 59.582 36.000 0.00 0.00 0.00 1.52
1619 3370 8.771766 AGAAACAGAAACGATTACTAGGAAAAC 58.228 33.333 0.00 0.00 0.00 2.43
1620 3371 8.441312 AAACAGAAACGATTACTAGGAAAACA 57.559 30.769 0.00 0.00 0.00 2.83
1621 3372 8.617290 AACAGAAACGATTACTAGGAAAACAT 57.383 30.769 0.00 0.00 0.00 2.71
1622 3373 8.617290 ACAGAAACGATTACTAGGAAAACATT 57.383 30.769 0.00 0.00 0.00 2.71
1623 3374 8.718734 ACAGAAACGATTACTAGGAAAACATTC 58.281 33.333 0.00 0.00 0.00 2.67
1624 3375 8.717821 CAGAAACGATTACTAGGAAAACATTCA 58.282 33.333 0.00 0.00 0.00 2.57
1625 3376 8.936864 AGAAACGATTACTAGGAAAACATTCAG 58.063 33.333 0.00 0.00 0.00 3.02
1626 3377 6.663944 ACGATTACTAGGAAAACATTCAGC 57.336 37.500 0.00 0.00 0.00 4.26
1627 3378 6.170506 ACGATTACTAGGAAAACATTCAGCA 58.829 36.000 0.00 0.00 0.00 4.41
1628 3379 6.313905 ACGATTACTAGGAAAACATTCAGCAG 59.686 38.462 0.00 0.00 0.00 4.24
1629 3380 6.238211 CGATTACTAGGAAAACATTCAGCAGG 60.238 42.308 0.00 0.00 0.00 4.85
1630 3381 4.640771 ACTAGGAAAACATTCAGCAGGA 57.359 40.909 0.00 0.00 0.00 3.86
1636 3387 6.594744 AGGAAAACATTCAGCAGGAAAATTT 58.405 32.000 0.00 0.00 39.39 1.82
1655 3406 1.078637 GGGGAGTAACCGGTTCTGC 60.079 63.158 26.16 23.19 40.11 4.26
1671 3422 1.870055 CTGCTTTCCACGCTGGCAAT 61.870 55.000 0.00 0.00 37.47 3.56
1672 3423 0.607762 TGCTTTCCACGCTGGCAATA 60.608 50.000 0.00 0.00 37.47 1.90
1674 3425 1.468054 GCTTTCCACGCTGGCAATAAG 60.468 52.381 0.00 0.00 37.47 1.73
1675 3426 0.525761 TTTCCACGCTGGCAATAAGC 59.474 50.000 0.00 0.00 44.65 3.09
1736 3539 6.145858 TGAAATTTGATTTGAATTGAGCGTGG 59.854 34.615 0.00 0.00 31.47 4.94
1737 3540 3.574284 TTGATTTGAATTGAGCGTGGG 57.426 42.857 0.00 0.00 0.00 4.61
1746 3549 4.764823 TGAATTGAGCGTGGGTTCTAAAAT 59.235 37.500 0.00 0.00 0.00 1.82
1815 3619 4.690280 GTGATTTTACACCCTTGCATTTGG 59.310 41.667 0.00 0.00 35.07 3.28
1834 3638 8.078596 GCATTTGGGTCTGAGATTTTATATGAC 58.921 37.037 0.00 0.00 0.00 3.06
1866 3671 6.619801 AGCAAATTACCTGTCGATATTTCC 57.380 37.500 0.00 0.00 0.00 3.13
1884 3689 0.108186 CCGGTTACTGCAGCATCTGA 60.108 55.000 15.27 0.00 32.44 3.27
1902 3707 6.591062 GCATCTGAATTATTTTCTGCCAACAA 59.409 34.615 0.00 0.00 0.00 2.83
1903 3708 7.118101 GCATCTGAATTATTTTCTGCCAACAAA 59.882 33.333 0.00 0.00 0.00 2.83
1904 3709 8.653338 CATCTGAATTATTTTCTGCCAACAAAG 58.347 33.333 0.00 0.00 0.00 2.77
1905 3710 7.950512 TCTGAATTATTTTCTGCCAACAAAGA 58.049 30.769 0.00 0.00 0.00 2.52
1906 3711 8.420222 TCTGAATTATTTTCTGCCAACAAAGAA 58.580 29.630 0.00 0.00 0.00 2.52
1907 3712 8.954950 TGAATTATTTTCTGCCAACAAAGAAA 57.045 26.923 0.00 0.00 39.91 2.52
1908 3713 9.558396 TGAATTATTTTCTGCCAACAAAGAAAT 57.442 25.926 0.00 0.00 40.94 2.17
1917 3722 9.995003 TTCTGCCAACAAAGAAATAAATTATGT 57.005 25.926 0.00 0.00 29.59 2.29
1918 3723 9.995003 TCTGCCAACAAAGAAATAAATTATGTT 57.005 25.926 0.00 0.00 0.00 2.71
1966 3777 0.104120 CCAGATGCATTGCACCATGG 59.896 55.000 14.66 17.20 43.04 3.66
1967 3778 0.529773 CAGATGCATTGCACCATGGC 60.530 55.000 14.66 0.00 43.04 4.40
1968 3779 0.686441 AGATGCATTGCACCATGGCT 60.686 50.000 14.66 0.00 43.04 4.75
1970 3781 1.409790 GATGCATTGCACCATGGCTTA 59.590 47.619 14.66 0.00 43.04 3.09
1971 3782 0.818938 TGCATTGCACCATGGCTTAG 59.181 50.000 13.04 0.15 31.71 2.18
1976 3820 1.140375 GCACCATGGCTTAGCTTGC 59.860 57.895 13.04 8.70 0.00 4.01
1978 3822 1.108776 CACCATGGCTTAGCTTGCAT 58.891 50.000 13.04 0.00 0.00 3.96
1992 3836 0.321564 TTGCATCCTCCTGGTCAACG 60.322 55.000 0.00 0.00 34.23 4.10
1999 3843 2.635915 TCCTCCTGGTCAACGTGTTATT 59.364 45.455 0.00 0.00 34.23 1.40
2000 3844 3.000727 CCTCCTGGTCAACGTGTTATTC 58.999 50.000 0.00 0.00 0.00 1.75
2002 3846 4.315803 CTCCTGGTCAACGTGTTATTCTT 58.684 43.478 0.00 0.00 0.00 2.52
2003 3847 4.312443 TCCTGGTCAACGTGTTATTCTTC 58.688 43.478 0.00 0.00 0.00 2.87
2004 3848 4.039973 TCCTGGTCAACGTGTTATTCTTCT 59.960 41.667 0.00 0.00 0.00 2.85
2005 3849 4.755123 CCTGGTCAACGTGTTATTCTTCTT 59.245 41.667 0.00 0.00 0.00 2.52
2007 3851 4.753107 TGGTCAACGTGTTATTCTTCTTCC 59.247 41.667 0.00 0.00 0.00 3.46
2008 3852 4.995487 GGTCAACGTGTTATTCTTCTTCCT 59.005 41.667 0.00 0.00 0.00 3.36
2010 3854 5.694910 GTCAACGTGTTATTCTTCTTCCTGA 59.305 40.000 0.00 0.00 0.00 3.86
2014 3858 7.745620 ACGTGTTATTCTTCTTCCTGATTTT 57.254 32.000 0.00 0.00 0.00 1.82
2081 3925 5.125900 TGTTAAGGGCATCATGTCAAAGATG 59.874 40.000 12.10 12.10 43.42 2.90
2208 4055 5.927030 TCGAATGTAAGAAAATGTCAGCAC 58.073 37.500 0.00 0.00 0.00 4.40
2211 4058 6.347644 CGAATGTAAGAAAATGTCAGCACTGA 60.348 38.462 0.00 0.00 37.24 3.41
2282 4129 8.962857 AATTGAAAACGCAAACAAAATTTTCT 57.037 23.077 0.00 0.00 39.12 2.52
2283 4130 8.599876 ATTGAAAACGCAAACAAAATTTTCTC 57.400 26.923 0.00 0.00 39.12 2.87
2284 4131 7.357951 TGAAAACGCAAACAAAATTTTCTCT 57.642 28.000 0.00 0.00 39.12 3.10
2285 4132 7.232994 TGAAAACGCAAACAAAATTTTCTCTG 58.767 30.769 0.00 0.00 39.12 3.35
2286 4133 6.720012 AAACGCAAACAAAATTTTCTCTGT 57.280 29.167 0.00 0.00 0.00 3.41
2309 4156 4.826274 TTCGGAGAGGTGAGAATGATTT 57.174 40.909 0.00 0.00 38.43 2.17
2338 4185 5.216566 TGAAAATATTCGACGCTCCAAAG 57.783 39.130 0.00 0.00 38.46 2.77
2375 4222 5.163683 ACCTCTTTGATTCGCATGAATTCAG 60.164 40.000 14.54 7.33 44.79 3.02
2384 4231 4.417506 TCGCATGAATTCAGAAAATGCAG 58.582 39.130 23.59 17.69 42.95 4.41
2388 4235 5.234329 GCATGAATTCAGAAAATGCAGGATG 59.766 40.000 20.72 8.70 42.48 3.51
2389 4236 5.333299 TGAATTCAGAAAATGCAGGATGG 57.667 39.130 3.38 0.00 35.86 3.51
2390 4237 3.814005 ATTCAGAAAATGCAGGATGGC 57.186 42.857 0.00 0.00 35.86 4.40
2416 4263 4.329256 CAGTATGCTCTGTTGATCTGTGTG 59.671 45.833 0.00 0.00 0.00 3.82
2427 4274 5.593909 TGTTGATCTGTGTGGATTCAAAACT 59.406 36.000 0.00 0.00 0.00 2.66
2430 4277 6.533730 TGATCTGTGTGGATTCAAAACTACT 58.466 36.000 0.00 0.00 0.00 2.57
2431 4278 6.998074 TGATCTGTGTGGATTCAAAACTACTT 59.002 34.615 0.00 0.00 0.00 2.24
2445 4292 9.581099 TTCAAAACTACTTGAAATCAAAAGGAC 57.419 29.630 0.00 0.00 41.25 3.85
2578 4841 4.155733 TGCATAGCGGACCACGGG 62.156 66.667 0.00 0.00 44.51 5.28
2706 4969 0.105224 TCTGGTTTCGGTTTCTGCGA 59.895 50.000 0.00 0.00 0.00 5.10
2712 4975 2.758770 TTCGGTTTCTGCGACGGAGG 62.759 60.000 16.74 0.00 0.00 4.30
2824 5087 0.179029 CCAACCCCGTGATCCCATAC 60.179 60.000 0.00 0.00 0.00 2.39
2829 5092 3.036084 CGTGATCCCATACCGCGC 61.036 66.667 0.00 0.00 0.00 6.86
3174 5455 3.068691 CGAGCCGTCTCCCTTCCA 61.069 66.667 0.00 0.00 35.94 3.53
3189 5470 3.368739 CCCTTCCATTGTCCATTTTGCTC 60.369 47.826 0.00 0.00 0.00 4.26
3193 5474 2.232941 CCATTGTCCATTTTGCTCTGCT 59.767 45.455 0.00 0.00 0.00 4.24
3208 5489 4.050719 GCTTTTTGCACAGCGCGC 62.051 61.111 26.66 26.66 46.97 6.86
3209 5490 2.654724 CTTTTTGCACAGCGCGCA 60.655 55.556 35.10 9.38 46.97 6.09
3210 5491 2.017783 CTTTTTGCACAGCGCGCAT 61.018 52.632 35.10 18.85 46.97 4.73
3211 5492 1.937196 CTTTTTGCACAGCGCGCATC 61.937 55.000 35.10 18.50 46.97 3.91
3212 5493 3.895102 TTTTGCACAGCGCGCATCC 62.895 57.895 35.10 18.26 46.97 3.51
3221 5502 3.179481 CGCGCATCCGGGTAAAAA 58.821 55.556 8.75 0.00 41.82 1.94
3225 5506 1.797348 GCGCATCCGGGTAAAAATGTG 60.797 52.381 0.30 4.55 33.77 3.21
3234 5515 3.317150 GGGTAAAAATGTGCACAGCTTC 58.683 45.455 25.84 12.35 0.00 3.86
3235 5516 3.317150 GGTAAAAATGTGCACAGCTTCC 58.683 45.455 25.84 17.03 0.00 3.46
3236 5517 2.531522 AAAAATGTGCACAGCTTCCC 57.468 45.000 25.84 0.00 0.00 3.97
3237 5518 0.314935 AAAATGTGCACAGCTTCCCG 59.685 50.000 25.84 0.00 0.00 5.14
3238 5519 1.526575 AAATGTGCACAGCTTCCCGG 61.527 55.000 25.84 0.00 0.00 5.73
3243 5524 3.710722 CACAGCTTCCCGGCCTCT 61.711 66.667 0.00 0.00 0.00 3.69
3244 5525 3.710722 ACAGCTTCCCGGCCTCTG 61.711 66.667 0.00 2.65 0.00 3.35
3247 5528 4.496336 GCTTCCCGGCCTCTGCAT 62.496 66.667 0.00 0.00 40.13 3.96
3248 5529 2.203126 CTTCCCGGCCTCTGCATC 60.203 66.667 0.00 0.00 40.13 3.91
3249 5530 3.008517 TTCCCGGCCTCTGCATCA 61.009 61.111 0.00 0.00 40.13 3.07
3250 5531 2.937379 CTTCCCGGCCTCTGCATCAG 62.937 65.000 0.00 0.00 40.13 2.90
3251 5532 3.473647 CCCGGCCTCTGCATCAGA 61.474 66.667 0.00 0.00 38.25 3.27
3252 5533 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
3253 5534 1.817099 CCGGCCTCTGCATCAGAAC 60.817 63.158 0.00 0.00 40.18 3.01
3254 5535 2.169789 CGGCCTCTGCATCAGAACG 61.170 63.158 0.00 0.63 40.18 3.95
3255 5536 1.078848 GGCCTCTGCATCAGAACGT 60.079 57.895 0.00 0.00 40.18 3.99
3256 5537 1.364626 GGCCTCTGCATCAGAACGTG 61.365 60.000 0.00 0.00 40.18 4.49
3257 5538 1.975363 GCCTCTGCATCAGAACGTGC 61.975 60.000 0.00 0.00 40.18 5.34
3258 5539 1.364626 CCTCTGCATCAGAACGTGCC 61.365 60.000 0.00 0.00 40.18 5.01
3259 5540 0.671472 CTCTGCATCAGAACGTGCCA 60.671 55.000 0.00 0.00 40.18 4.92
3260 5541 0.250252 TCTGCATCAGAACGTGCCAA 60.250 50.000 0.00 0.00 37.57 4.52
3261 5542 0.806868 CTGCATCAGAACGTGCCAAT 59.193 50.000 0.00 0.00 40.56 3.16
3262 5543 0.522626 TGCATCAGAACGTGCCAATG 59.477 50.000 0.00 0.00 40.56 2.82
3263 5544 0.523072 GCATCAGAACGTGCCAATGT 59.477 50.000 7.40 0.00 35.35 2.71
3264 5545 1.737236 GCATCAGAACGTGCCAATGTA 59.263 47.619 7.40 0.00 35.35 2.29
3265 5546 2.355756 GCATCAGAACGTGCCAATGTAT 59.644 45.455 7.40 0.00 35.35 2.29
3266 5547 3.789791 GCATCAGAACGTGCCAATGTATG 60.790 47.826 7.40 0.65 35.35 2.39
3267 5548 1.737236 TCAGAACGTGCCAATGTATGC 59.263 47.619 0.00 0.00 0.00 3.14
3268 5549 1.468127 CAGAACGTGCCAATGTATGCA 59.532 47.619 0.00 0.00 34.54 3.96
3269 5550 2.097954 CAGAACGTGCCAATGTATGCAT 59.902 45.455 3.79 3.79 40.07 3.96
3270 5551 2.754552 AGAACGTGCCAATGTATGCATT 59.245 40.909 3.54 2.84 45.42 3.56
3279 5560 3.957671 AATGTATGCATTGCTCGTGAG 57.042 42.857 3.54 0.00 43.12 3.51
3280 5561 2.671130 TGTATGCATTGCTCGTGAGA 57.329 45.000 3.54 0.00 39.12 3.27
3281 5562 3.183793 TGTATGCATTGCTCGTGAGAT 57.816 42.857 3.54 0.00 40.84 2.75
3282 5563 3.126073 TGTATGCATTGCTCGTGAGATC 58.874 45.455 3.54 0.00 40.84 2.75
3283 5564 2.320745 ATGCATTGCTCGTGAGATCA 57.679 45.000 10.49 0.00 40.84 2.92
3284 5565 1.362768 TGCATTGCTCGTGAGATCAC 58.637 50.000 10.49 2.78 43.15 3.06
3285 5566 1.066645 TGCATTGCTCGTGAGATCACT 60.067 47.619 10.49 0.00 44.34 3.41
3286 5567 2.005451 GCATTGCTCGTGAGATCACTT 58.995 47.619 10.99 0.00 44.34 3.16
3287 5568 3.190079 GCATTGCTCGTGAGATCACTTA 58.810 45.455 10.99 0.00 44.34 2.24
3288 5569 3.000724 GCATTGCTCGTGAGATCACTTAC 59.999 47.826 10.99 1.18 44.34 2.34
3297 5578 3.368236 GTGAGATCACTTACGTTTGCTCC 59.632 47.826 5.72 0.00 43.25 4.70
3309 5590 2.606108 GTTTGCTCCAATTTAAGCGGG 58.394 47.619 4.77 0.00 41.51 6.13
3314 5595 0.252479 TCCAATTTAAGCGGGGCGTA 59.748 50.000 0.00 0.00 0.00 4.42
3333 5614 3.562635 CCGAAGGCACCGACTTTC 58.437 61.111 0.13 0.00 46.14 2.62
3338 5619 2.495084 GAAGGCACCGACTTTCTTTCT 58.505 47.619 0.00 0.00 26.99 2.52
3339 5620 2.640316 AGGCACCGACTTTCTTTCTT 57.360 45.000 0.00 0.00 0.00 2.52
3340 5621 2.932261 AGGCACCGACTTTCTTTCTTT 58.068 42.857 0.00 0.00 0.00 2.52
3342 5623 3.699538 AGGCACCGACTTTCTTTCTTTTT 59.300 39.130 0.00 0.00 0.00 1.94
3358 5639 2.136791 TTTTTGCGGGGGAAATGCA 58.863 47.368 0.00 0.00 36.72 3.96
3359 5640 0.689623 TTTTTGCGGGGGAAATGCAT 59.310 45.000 0.00 0.00 38.60 3.96
3362 5643 1.561643 TTGCGGGGGAAATGCATAAA 58.438 45.000 0.00 0.00 38.60 1.40
3363 5644 1.561643 TGCGGGGGAAATGCATAAAA 58.438 45.000 0.00 0.00 32.86 1.52
3365 5646 1.472552 GCGGGGGAAATGCATAAAACC 60.473 52.381 0.00 0.33 0.00 3.27
3366 5647 1.827969 CGGGGGAAATGCATAAAACCA 59.172 47.619 0.00 0.00 0.00 3.67
3381 6603 7.930325 TGCATAAAACCATTTTGTTCTCATTGA 59.070 29.630 0.00 0.00 34.19 2.57
3389 6611 8.550376 ACCATTTTGTTCTCATTGAAATTTTCG 58.450 29.630 4.76 0.00 36.30 3.46
3390 6612 8.763356 CCATTTTGTTCTCATTGAAATTTTCGA 58.237 29.630 1.58 1.58 36.30 3.71
3391 6613 9.571804 CATTTTGTTCTCATTGAAATTTTCGAC 57.428 29.630 1.09 0.00 36.30 4.20
3392 6614 6.968004 TTGTTCTCATTGAAATTTTCGACG 57.032 33.333 1.09 0.00 36.30 5.12
3393 6615 5.448438 TGTTCTCATTGAAATTTTCGACGG 58.552 37.500 1.09 0.00 36.30 4.79
3394 6616 5.008217 TGTTCTCATTGAAATTTTCGACGGT 59.992 36.000 1.09 0.00 36.30 4.83
3395 6617 5.682943 TCTCATTGAAATTTTCGACGGTT 57.317 34.783 1.09 0.00 0.00 4.44
3396 6618 6.067263 TCTCATTGAAATTTTCGACGGTTT 57.933 33.333 1.09 0.00 0.00 3.27
3397 6619 6.500041 TCTCATTGAAATTTTCGACGGTTTT 58.500 32.000 1.09 0.00 0.00 2.43
3398 6620 6.975772 TCTCATTGAAATTTTCGACGGTTTTT 59.024 30.769 1.09 0.00 0.00 1.94
3399 6621 7.155858 TCATTGAAATTTTCGACGGTTTTTC 57.844 32.000 1.09 1.33 0.00 2.29
3400 6622 5.952698 TTGAAATTTTCGACGGTTTTTCC 57.047 34.783 4.76 0.00 0.00 3.13
3401 6623 5.251601 TGAAATTTTCGACGGTTTTTCCT 57.748 34.783 4.76 0.00 0.00 3.36
3402 6624 5.038033 TGAAATTTTCGACGGTTTTTCCTG 58.962 37.500 4.76 0.00 0.00 3.86
3403 6625 3.636282 ATTTTCGACGGTTTTTCCTGG 57.364 42.857 0.00 0.00 0.00 4.45
3404 6626 0.664224 TTTCGACGGTTTTTCCTGGC 59.336 50.000 0.00 0.00 0.00 4.85
3405 6627 1.167781 TTCGACGGTTTTTCCTGGCC 61.168 55.000 0.00 0.00 0.00 5.36
3406 6628 2.622962 CGACGGTTTTTCCTGGCCC 61.623 63.158 0.00 0.00 0.00 5.80
3407 6629 1.228459 GACGGTTTTTCCTGGCCCT 60.228 57.895 0.00 0.00 0.00 5.19
3408 6630 1.524008 GACGGTTTTTCCTGGCCCTG 61.524 60.000 0.00 0.00 0.00 4.45
3409 6631 1.228429 CGGTTTTTCCTGGCCCTGA 60.228 57.895 0.00 0.00 0.00 3.86
3414 6636 1.065410 TTTTCCTGGCCCTGACCTGA 61.065 55.000 0.00 0.00 0.00 3.86
3417 6639 1.001641 CCTGGCCCTGACCTGAAAG 60.002 63.158 0.00 0.00 0.00 2.62
3430 6652 6.313519 TGACCTGAAAGTATAGGCTGATTT 57.686 37.500 0.00 0.00 37.61 2.17
3435 6657 6.560003 TGAAAGTATAGGCTGATTTCAGGA 57.440 37.500 9.49 0.00 43.94 3.86
3461 6683 7.502226 ACTCTCCTGATTTTTGTGTATGTTTCA 59.498 33.333 0.00 0.00 0.00 2.69
3470 6692 3.937814 TGTGTATGTTTCACTGGCCTAG 58.062 45.455 3.32 2.01 36.83 3.02
3478 6700 4.953579 TGTTTCACTGGCCTAGTTCTTTTT 59.046 37.500 3.32 0.00 37.60 1.94
3570 6852 1.743252 GGCAACAGCTCCTTCTCCG 60.743 63.158 0.00 0.00 0.00 4.63
3575 6857 1.153469 CAGCTCCTTCTCCGCTTCC 60.153 63.158 0.00 0.00 0.00 3.46
3631 6917 4.095610 CAAGACGTTGTCAGAAACCAAAC 58.904 43.478 0.00 0.00 34.60 2.93
3640 6926 4.207955 GTCAGAAACCAAACTCCTTCCTT 58.792 43.478 0.00 0.00 0.00 3.36
3643 7013 3.954258 AGAAACCAAACTCCTTCCTTGTG 59.046 43.478 0.00 0.00 0.00 3.33
3661 7031 5.446473 CCTTGTGTATAGCTCTCGCAAAAAG 60.446 44.000 0.00 0.00 39.10 2.27
3682 7052 4.381411 AGTTGCAACTTAAGAGACCACTC 58.619 43.478 26.36 0.00 38.54 3.51
3697 7068 0.595095 CACTCAAGTTCTTGCTGCCC 59.405 55.000 7.58 0.00 0.00 5.36
3700 7071 0.250901 TCAAGTTCTTGCTGCCCCTC 60.251 55.000 7.58 0.00 0.00 4.30
3705 7076 0.540365 TTCTTGCTGCCCCTCCAAAG 60.540 55.000 0.00 0.00 0.00 2.77
3762 7133 6.549364 TCCCTAGCCCAACACAATTATATTTG 59.451 38.462 5.93 5.93 0.00 2.32
3787 7158 7.918033 TGTGTCAACATGATTTTGTTTACGAAT 59.082 29.630 0.00 0.00 37.73 3.34
3811 7182 0.388649 GCAGATCTCCAACACGTCGT 60.389 55.000 0.00 0.00 0.00 4.34
3830 7201 1.063174 GTCACGATCTTCCATGCTTGC 59.937 52.381 0.00 0.00 0.00 4.01
3854 7225 2.975851 CAACGTTTGCAGCTCAGAATTC 59.024 45.455 0.00 0.00 0.00 2.17
3863 7235 8.550376 GTTTGCAGCTCAGAATTCAAATTAAAA 58.450 29.630 8.44 0.00 0.00 1.52
3884 7256 0.529119 GCCACTTGCAAGCATATGGC 60.529 55.000 31.26 31.26 44.44 4.40
3912 7284 2.082231 CAGATCACTTGTGAAGGCCAG 58.918 52.381 5.01 0.00 0.00 4.85
4017 7392 0.471591 TCCATTTGGGCAGCTGGTTT 60.472 50.000 17.12 0.00 36.21 3.27
4045 7420 3.743396 GTCACCTCACATTCTTCTGTCAC 59.257 47.826 0.00 0.00 0.00 3.67
4052 7427 6.401474 CCTCACATTCTTCTGTCACATTTACG 60.401 42.308 0.00 0.00 0.00 3.18
4058 7447 4.447724 TCTTCTGTCACATTTACGCTGTTC 59.552 41.667 0.00 0.00 0.00 3.18
4059 7448 3.723260 TCTGTCACATTTACGCTGTTCA 58.277 40.909 0.00 0.00 0.00 3.18
4061 7450 4.754618 TCTGTCACATTTACGCTGTTCAAT 59.245 37.500 0.00 0.00 0.00 2.57
4062 7451 5.929415 TCTGTCACATTTACGCTGTTCAATA 59.071 36.000 0.00 0.00 0.00 1.90
4063 7452 6.090763 TCTGTCACATTTACGCTGTTCAATAG 59.909 38.462 0.00 0.00 0.00 1.73
4064 7453 5.699001 TGTCACATTTACGCTGTTCAATAGT 59.301 36.000 0.00 0.00 0.00 2.12
4065 7454 6.203915 TGTCACATTTACGCTGTTCAATAGTT 59.796 34.615 0.00 0.00 0.00 2.24
4066 7455 6.519761 GTCACATTTACGCTGTTCAATAGTTG 59.480 38.462 0.00 0.00 0.00 3.16
4067 7456 6.425417 TCACATTTACGCTGTTCAATAGTTGA 59.575 34.615 0.00 0.00 38.04 3.18
4068 7457 6.738200 CACATTTACGCTGTTCAATAGTTGAG 59.262 38.462 0.00 0.00 41.38 3.02
4069 7458 4.921470 TTACGCTGTTCAATAGTTGAGC 57.079 40.909 0.37 0.37 41.38 4.26
4070 7459 2.425989 CGCTGTTCAATAGTTGAGCG 57.574 50.000 9.35 9.35 42.91 5.03
4071 7460 1.726791 CGCTGTTCAATAGTTGAGCGT 59.273 47.619 13.31 0.00 42.92 5.07
4072 7461 2.157668 CGCTGTTCAATAGTTGAGCGTT 59.842 45.455 13.31 0.00 42.92 4.84
4073 7462 3.363970 CGCTGTTCAATAGTTGAGCGTTT 60.364 43.478 13.31 0.00 42.92 3.60
4074 7463 3.908382 GCTGTTCAATAGTTGAGCGTTTG 59.092 43.478 2.85 0.00 42.91 2.93
4075 7464 4.466828 CTGTTCAATAGTTGAGCGTTTGG 58.533 43.478 2.85 0.00 42.91 3.28
4080 7469 2.004583 TAGTTGAGCGTTTGGATCGG 57.995 50.000 0.00 0.00 32.36 4.18
4084 7473 2.933906 GTTGAGCGTTTGGATCGGATTA 59.066 45.455 0.00 0.00 32.36 1.75
4103 7492 6.087555 CGGATTAACTTTTGGTGAAACATTCG 59.912 38.462 0.00 0.00 39.98 3.34
4126 7515 5.228635 CGCACATGAGATGAAAGTAAATTGC 59.771 40.000 0.00 0.00 0.00 3.56
4225 7614 2.586357 GGGACTGGAAGATCGCGC 60.586 66.667 0.00 0.00 37.43 6.86
4356 7745 2.357034 ACCCGCTACAACACGCTG 60.357 61.111 0.00 0.00 0.00 5.18
4692 8081 2.363795 ATCAGCCGGACCGAGGAA 60.364 61.111 17.49 0.00 0.00 3.36
5019 8408 3.200593 CCGCTGCTCATGCTGTCC 61.201 66.667 0.00 0.00 39.81 4.02
5192 8581 2.396160 ACGTCAGTCAGTCGTGTAAC 57.604 50.000 0.00 0.00 40.37 2.50
5275 8668 3.004734 CACCGCCTTTTGAGACAAATCTT 59.995 43.478 0.00 0.00 34.34 2.40
5280 8673 5.562696 CGCCTTTTGAGACAAATCTTTGCTA 60.563 40.000 2.63 0.00 41.79 3.49
5287 8680 5.180117 TGAGACAAATCTTTGCTAAGAGCAC 59.820 40.000 15.63 6.14 43.14 4.40
5288 8681 5.411053 GAGACAAATCTTTGCTAAGAGCACT 59.589 40.000 15.63 10.03 43.14 4.40
5289 8682 6.591834 GAGACAAATCTTTGCTAAGAGCACTA 59.408 38.462 15.63 0.00 43.14 2.74
5290 8683 7.118390 GAGACAAATCTTTGCTAAGAGCACTAA 59.882 37.037 15.63 0.00 43.14 2.24
5297 8690 2.189342 GCTAAGAGCACTAACTCTGCG 58.811 52.381 0.00 0.00 46.38 5.18
5298 8691 2.416162 GCTAAGAGCACTAACTCTGCGT 60.416 50.000 0.00 0.00 46.38 5.24
5299 8692 2.071688 AAGAGCACTAACTCTGCGTG 57.928 50.000 0.00 0.00 46.38 5.34
5300 8693 1.937108 AAGAGCACTAACTCTGCGTGC 60.937 52.381 5.55 5.55 46.38 5.34
5303 8696 3.201342 CACTAACTCTGCGTGCTGT 57.799 52.632 0.00 0.00 0.00 4.40
5304 8697 1.063806 CACTAACTCTGCGTGCTGTC 58.936 55.000 0.00 0.00 0.00 3.51
5305 8698 0.038159 ACTAACTCTGCGTGCTGTCC 60.038 55.000 0.00 0.00 0.00 4.02
5306 8699 0.038251 CTAACTCTGCGTGCTGTCCA 60.038 55.000 0.00 0.00 0.00 4.02
5307 8700 0.391228 TAACTCTGCGTGCTGTCCAA 59.609 50.000 0.00 0.00 0.00 3.53
5308 8701 0.882042 AACTCTGCGTGCTGTCCAAG 60.882 55.000 0.00 0.00 0.00 3.61
5309 8702 1.301244 CTCTGCGTGCTGTCCAAGT 60.301 57.895 0.00 0.00 0.00 3.16
5310 8703 1.287730 CTCTGCGTGCTGTCCAAGTC 61.288 60.000 0.00 0.00 0.00 3.01
5311 8704 2.280797 TGCGTGCTGTCCAAGTCC 60.281 61.111 0.00 0.00 0.00 3.85
5312 8705 2.280797 GCGTGCTGTCCAAGTCCA 60.281 61.111 0.00 0.00 0.00 4.02
5316 8709 0.947244 GTGCTGTCCAAGTCCAAGTG 59.053 55.000 0.00 0.00 0.00 3.16
5350 8743 3.730761 CCCTTCTGCGTGCTGTGC 61.731 66.667 0.00 0.00 0.00 4.57
5353 8746 1.356270 CTTCTGCGTGCTGTGCAAA 59.644 52.632 0.00 0.00 42.70 3.68
5431 8824 0.106708 TTATGGGCAGTGCGATCTCC 59.893 55.000 9.45 4.63 0.00 3.71
5493 8886 1.003355 CCGAACTGCCAGTGGATGT 60.003 57.895 15.20 7.56 0.00 3.06
5655 9048 1.757118 CTTCCCTTCTGCGGATCTGTA 59.243 52.381 2.89 0.00 0.00 2.74
5677 9070 1.215382 CATGGCGAAGTCGAGTGGA 59.785 57.895 4.59 0.00 43.02 4.02
5691 9084 5.414765 AGTCGAGTGGAAAACTTTTCTTGTT 59.585 36.000 12.88 0.00 40.07 2.83
5725 9118 0.933097 CTGCCACTGTGCGTGATATC 59.067 55.000 1.29 0.00 46.81 1.63
5761 9154 2.189257 CCGATGGTCATGCCCGAA 59.811 61.111 4.07 0.00 36.04 4.30
5764 9157 1.714899 CGATGGTCATGCCCGAAACC 61.715 60.000 4.07 0.00 36.04 3.27
5765 9158 0.679640 GATGGTCATGCCCGAAACCA 60.680 55.000 4.34 4.34 45.32 3.67
5767 9160 1.303317 GGTCATGCCCGAAACCAGT 60.303 57.895 0.00 0.00 0.00 4.00
5819 9212 0.037326 GTGTGAGGACCGCATCAAGA 60.037 55.000 0.00 0.00 36.47 3.02
5884 9277 3.664769 CTCATCAGGATGGGGCCA 58.335 61.111 4.39 0.00 39.24 5.36
5977 9370 2.378547 AGGCTACCAAATCAAGGTGGAA 59.621 45.455 0.00 0.00 39.74 3.53
5978 9371 3.161866 GGCTACCAAATCAAGGTGGAAA 58.838 45.455 0.00 0.00 39.74 3.13
5980 9373 3.193479 GCTACCAAATCAAGGTGGAAAGG 59.807 47.826 0.00 0.00 39.74 3.11
6113 9508 2.359107 CAGTCGGTGCAGCCACAT 60.359 61.111 15.96 0.00 43.88 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 3.382546 GGGAGTGAATATTGCAATGCTGT 59.617 43.478 22.27 4.04 0.00 4.40
58 59 3.824133 TGGCAGATGGGAGTGAATATTG 58.176 45.455 0.00 0.00 0.00 1.90
67 68 2.213499 GAAACGTATGGCAGATGGGAG 58.787 52.381 6.27 0.00 0.00 4.30
73 74 5.029807 TGATATTGGAAACGTATGGCAGA 57.970 39.130 0.00 0.00 0.00 4.26
74 75 5.749596 TTGATATTGGAAACGTATGGCAG 57.250 39.130 0.00 0.00 0.00 4.85
99 100 3.381949 GAACAGTATCACCGGTATCTGC 58.618 50.000 6.87 0.00 0.00 4.26
100 101 3.066342 ACGAACAGTATCACCGGTATCTG 59.934 47.826 6.87 15.40 0.00 2.90
101 102 3.285484 ACGAACAGTATCACCGGTATCT 58.715 45.455 6.87 0.00 0.00 1.98
108 109 6.759827 ACCAATATGTTACGAACAGTATCACC 59.240 38.462 0.00 0.00 45.95 4.02
174 175 3.196901 ACACCGTCCATGAATACAGCTAA 59.803 43.478 0.00 0.00 0.00 3.09
178 179 2.093711 TCCACACCGTCCATGAATACAG 60.094 50.000 0.00 0.00 0.00 2.74
179 180 1.903183 TCCACACCGTCCATGAATACA 59.097 47.619 0.00 0.00 0.00 2.29
189 190 1.798813 GAACAGACAATCCACACCGTC 59.201 52.381 0.00 0.00 0.00 4.79
192 193 2.270352 TGGAACAGACAATCCACACC 57.730 50.000 0.00 0.00 40.74 4.16
201 202 3.118075 TCACTGTGGATTTGGAACAGACA 60.118 43.478 8.11 0.00 43.22 3.41
204 205 3.251729 CAGTCACTGTGGATTTGGAACAG 59.748 47.826 8.11 0.67 45.46 3.16
216 217 4.451241 ACAGCTGCAGTCACTGTG 57.549 55.556 20.46 0.17 42.83 3.66
217 218 0.107508 AACACAGCTGCAGTCACTGT 60.108 50.000 15.27 16.76 45.25 3.55
227 228 3.514645 AGCTTTTGAAACAACACAGCTG 58.485 40.909 13.48 13.48 36.16 4.24
238 239 6.848451 ACGTCTAGTTTTGAAGCTTTTGAAA 58.152 32.000 0.00 0.00 0.00 2.69
251 252 7.987649 TGTGTAAAAATTGGACGTCTAGTTTT 58.012 30.769 23.26 23.26 34.18 2.43
257 258 4.553938 CGCTTGTGTAAAAATTGGACGTCT 60.554 41.667 16.46 0.00 0.00 4.18
259 260 3.312973 TCGCTTGTGTAAAAATTGGACGT 59.687 39.130 0.00 0.00 0.00 4.34
260 261 3.879427 TCGCTTGTGTAAAAATTGGACG 58.121 40.909 0.00 0.00 0.00 4.79
261 262 6.419413 TCATTTCGCTTGTGTAAAAATTGGAC 59.581 34.615 0.00 0.00 0.00 4.02
262 263 6.507900 TCATTTCGCTTGTGTAAAAATTGGA 58.492 32.000 0.00 0.00 0.00 3.53
263 264 6.761731 TCATTTCGCTTGTGTAAAAATTGG 57.238 33.333 0.00 0.00 0.00 3.16
264 265 7.998212 GTCTTCATTTCGCTTGTGTAAAAATTG 59.002 33.333 0.00 0.00 0.00 2.32
265 266 7.169140 GGTCTTCATTTCGCTTGTGTAAAAATT 59.831 33.333 0.00 0.00 0.00 1.82
266 267 6.640907 GGTCTTCATTTCGCTTGTGTAAAAAT 59.359 34.615 0.00 0.00 0.00 1.82
267 268 5.974751 GGTCTTCATTTCGCTTGTGTAAAAA 59.025 36.000 0.00 0.00 0.00 1.94
268 269 5.298276 AGGTCTTCATTTCGCTTGTGTAAAA 59.702 36.000 0.00 0.00 0.00 1.52
269 270 4.819630 AGGTCTTCATTTCGCTTGTGTAAA 59.180 37.500 0.00 0.00 0.00 2.01
270 271 4.385825 AGGTCTTCATTTCGCTTGTGTAA 58.614 39.130 0.00 0.00 0.00 2.41
271 272 3.994392 GAGGTCTTCATTTCGCTTGTGTA 59.006 43.478 0.00 0.00 0.00 2.90
272 273 2.808543 GAGGTCTTCATTTCGCTTGTGT 59.191 45.455 0.00 0.00 0.00 3.72
273 274 2.160417 GGAGGTCTTCATTTCGCTTGTG 59.840 50.000 0.00 0.00 0.00 3.33
274 275 2.039084 AGGAGGTCTTCATTTCGCTTGT 59.961 45.455 0.00 0.00 0.00 3.16
275 276 2.704572 AGGAGGTCTTCATTTCGCTTG 58.295 47.619 0.00 0.00 0.00 4.01
276 277 3.425162 AAGGAGGTCTTCATTTCGCTT 57.575 42.857 0.00 0.00 0.00 4.68
277 278 3.425162 AAAGGAGGTCTTCATTTCGCT 57.575 42.857 0.00 0.00 34.96 4.93
278 279 3.502211 TCAAAAGGAGGTCTTCATTTCGC 59.498 43.478 0.00 0.00 38.74 4.70
279 280 5.689383 TTCAAAAGGAGGTCTTCATTTCG 57.311 39.130 0.00 0.00 38.74 3.46
319 380 7.065803 GGCACAGAGAAATTTACATACTTAGCA 59.934 37.037 0.00 0.00 0.00 3.49
321 382 7.254455 CCGGCACAGAGAAATTTACATACTTAG 60.254 40.741 0.00 0.00 0.00 2.18
322 383 6.537301 CCGGCACAGAGAAATTTACATACTTA 59.463 38.462 0.00 0.00 0.00 2.24
323 384 5.354234 CCGGCACAGAGAAATTTACATACTT 59.646 40.000 0.00 0.00 0.00 2.24
324 385 4.876107 CCGGCACAGAGAAATTTACATACT 59.124 41.667 0.00 0.00 0.00 2.12
325 386 4.634443 ACCGGCACAGAGAAATTTACATAC 59.366 41.667 0.00 0.00 0.00 2.39
326 387 4.839121 ACCGGCACAGAGAAATTTACATA 58.161 39.130 0.00 0.00 0.00 2.29
327 388 3.686016 ACCGGCACAGAGAAATTTACAT 58.314 40.909 0.00 0.00 0.00 2.29
328 389 3.134574 ACCGGCACAGAGAAATTTACA 57.865 42.857 0.00 0.00 0.00 2.41
329 390 3.500680 TCAACCGGCACAGAGAAATTTAC 59.499 43.478 0.00 0.00 0.00 2.01
330 391 3.745799 TCAACCGGCACAGAGAAATTTA 58.254 40.909 0.00 0.00 0.00 1.40
331 392 2.582052 TCAACCGGCACAGAGAAATTT 58.418 42.857 0.00 0.00 0.00 1.82
332 393 2.270352 TCAACCGGCACAGAGAAATT 57.730 45.000 0.00 0.00 0.00 1.82
333 394 1.880027 GTTCAACCGGCACAGAGAAAT 59.120 47.619 0.00 0.00 0.00 2.17
334 395 1.305201 GTTCAACCGGCACAGAGAAA 58.695 50.000 0.00 0.00 0.00 2.52
335 396 0.179234 TGTTCAACCGGCACAGAGAA 59.821 50.000 0.00 0.00 0.00 2.87
336 397 0.531974 GTGTTCAACCGGCACAGAGA 60.532 55.000 0.00 0.00 33.70 3.10
337 398 0.532862 AGTGTTCAACCGGCACAGAG 60.533 55.000 0.00 0.00 35.75 3.35
338 399 0.531974 GAGTGTTCAACCGGCACAGA 60.532 55.000 0.00 0.00 35.75 3.41
346 407 4.537135 TCTGATGTAGGAGTGTTCAACC 57.463 45.455 0.00 0.00 0.00 3.77
356 417 5.080337 CAGGTAAGGCTATCTGATGTAGGA 58.920 45.833 0.00 0.00 38.38 2.94
375 436 5.245977 CCTCCAAACATGAAATTTACCAGGT 59.754 40.000 0.00 0.00 0.00 4.00
376 437 5.480073 TCCTCCAAACATGAAATTTACCAGG 59.520 40.000 0.00 0.00 0.00 4.45
377 438 6.588719 TCCTCCAAACATGAAATTTACCAG 57.411 37.500 0.00 0.00 0.00 4.00
378 439 6.325028 TGTTCCTCCAAACATGAAATTTACCA 59.675 34.615 0.00 0.00 34.31 3.25
379 440 6.754193 TGTTCCTCCAAACATGAAATTTACC 58.246 36.000 0.00 0.00 34.31 2.85
381 442 7.505585 AGTCTGTTCCTCCAAACATGAAATTTA 59.494 33.333 0.00 0.00 38.41 1.40
382 443 6.324770 AGTCTGTTCCTCCAAACATGAAATTT 59.675 34.615 0.00 0.00 38.41 1.82
384 445 5.242393 CAGTCTGTTCCTCCAAACATGAAAT 59.758 40.000 0.00 0.00 38.41 2.17
387 448 3.136443 ACAGTCTGTTCCTCCAAACATGA 59.864 43.478 0.00 0.00 38.41 3.07
388 449 3.480470 ACAGTCTGTTCCTCCAAACATG 58.520 45.455 0.00 0.00 38.41 3.21
390 451 4.764050 TTACAGTCTGTTCCTCCAAACA 57.236 40.909 11.54 0.00 37.56 2.83
391 452 5.123936 AGTTTACAGTCTGTTCCTCCAAAC 58.876 41.667 11.54 13.59 0.00 2.93
392 453 5.367945 AGTTTACAGTCTGTTCCTCCAAA 57.632 39.130 11.54 1.51 0.00 3.28
395 464 5.464030 TGTAGTTTACAGTCTGTTCCTCC 57.536 43.478 11.54 0.00 34.06 4.30
399 468 9.525409 TTTAGAGTTGTAGTTTACAGTCTGTTC 57.475 33.333 11.54 2.87 40.24 3.18
427 496 7.456725 AGGTCCATACTTCCATGATCTAATTG 58.543 38.462 0.00 0.00 0.00 2.32
433 502 5.071788 TGGTTAGGTCCATACTTCCATGATC 59.928 44.000 0.00 0.00 31.96 2.92
435 758 4.367166 TGGTTAGGTCCATACTTCCATGA 58.633 43.478 0.00 0.00 31.96 3.07
450 773 3.947196 TGCAATGCAGACTATTGGTTAGG 59.053 43.478 2.72 0.00 36.33 2.69
464 870 2.894763 ACTTCAAAAGCTGCAATGCA 57.105 40.000 7.99 7.99 36.92 3.96
471 877 6.324819 TGAACTTCTCAAACTTCAAAAGCTG 58.675 36.000 0.00 0.00 0.00 4.24
509 915 5.008217 GTGCACAAAACTGTTCCACACTATA 59.992 40.000 13.17 0.00 0.00 1.31
605 1011 4.811024 ACATAATGTCGCTGTAAGATGGTG 59.189 41.667 0.00 0.00 34.07 4.17
738 1144 3.420839 AGTGCCAGTTTTTCTTGTTCG 57.579 42.857 0.00 0.00 0.00 3.95
771 1177 6.127647 GGTGCATCTGATTTTACCAAGAATGA 60.128 38.462 0.00 0.00 0.00 2.57
823 1232 4.142447 CCCTCAACTGATGAAATTGCTCTG 60.142 45.833 0.00 0.00 37.67 3.35
828 1237 3.698040 CCTCCCCTCAACTGATGAAATTG 59.302 47.826 0.00 0.00 37.67 2.32
930 1343 3.099905 TGTGTCCCCTCTTATGAGTGAG 58.900 50.000 5.03 0.00 38.61 3.51
933 1346 2.044492 TCCTGTGTCCCCTCTTATGAGT 59.956 50.000 5.03 0.00 38.61 3.41
934 1347 2.697751 CTCCTGTGTCCCCTCTTATGAG 59.302 54.545 0.00 0.00 39.92 2.90
942 1355 3.947041 AGGGCTCCTGTGTCCCCT 61.947 66.667 0.00 0.00 42.99 4.79
955 1368 3.530535 GAGAAGAATCTGAACTCAGGGC 58.469 50.000 6.87 0.00 43.91 5.19
993 1406 2.016961 CTTCCAATCCATGCCGACG 58.983 57.895 0.00 0.00 0.00 5.12
995 1408 0.749091 CAGCTTCCAATCCATGCCGA 60.749 55.000 0.00 0.00 0.00 5.54
1035 1448 0.647925 GCGATCCGTTCTTCAGCTTC 59.352 55.000 0.00 0.00 0.00 3.86
1041 1454 0.379669 TCGTAGGCGATCCGTTCTTC 59.620 55.000 0.00 0.00 42.81 2.87
1134 1547 5.477984 ACCACAGATGTTTCATTTGCATAGT 59.522 36.000 0.00 0.00 0.00 2.12
1260 1678 1.754226 ACATTTCCTTGGTTTGCGTGT 59.246 42.857 0.00 0.00 0.00 4.49
1339 1757 5.767168 CCTTGAGATCTCCAAACAAAGAACT 59.233 40.000 20.03 0.00 0.00 3.01
1358 1776 1.623311 TGCACAGCTAAGCTACCTTGA 59.377 47.619 10.47 0.00 36.40 3.02
1364 1782 4.186926 CAGAATTCTGCACAGCTAAGCTA 58.813 43.478 21.96 0.00 35.43 3.32
1389 1807 6.610741 ATTAGAGAAACGATGAATTCTGGC 57.389 37.500 7.05 0.00 36.08 4.85
1413 1831 7.543172 CAGCTAACATGTTTTTGTAATGCTGAT 59.457 33.333 17.78 0.00 42.83 2.90
1560 3311 4.836125 ATTTTCTCAATGCGTCAAGTGT 57.164 36.364 0.00 0.00 0.00 3.55
1566 3317 2.945668 AGGGCTATTTTCTCAATGCGTC 59.054 45.455 0.00 0.00 0.00 5.19
1591 3342 6.989659 TCCTAGTAATCGTTTCTGTTTCTGT 58.010 36.000 0.00 0.00 0.00 3.41
1619 3370 3.261390 TCCCCAAATTTTCCTGCTGAATG 59.739 43.478 0.00 0.00 31.67 2.67
1620 3371 3.516700 CTCCCCAAATTTTCCTGCTGAAT 59.483 43.478 0.00 0.00 31.67 2.57
1621 3372 2.899256 CTCCCCAAATTTTCCTGCTGAA 59.101 45.455 0.00 0.00 0.00 3.02
1622 3373 2.158325 ACTCCCCAAATTTTCCTGCTGA 60.158 45.455 0.00 0.00 0.00 4.26
1623 3374 2.250924 ACTCCCCAAATTTTCCTGCTG 58.749 47.619 0.00 0.00 0.00 4.41
1624 3375 2.702270 ACTCCCCAAATTTTCCTGCT 57.298 45.000 0.00 0.00 0.00 4.24
1625 3376 3.056107 GGTTACTCCCCAAATTTTCCTGC 60.056 47.826 0.00 0.00 0.00 4.85
1626 3377 3.192633 CGGTTACTCCCCAAATTTTCCTG 59.807 47.826 0.00 0.00 0.00 3.86
1627 3378 3.427573 CGGTTACTCCCCAAATTTTCCT 58.572 45.455 0.00 0.00 0.00 3.36
1628 3379 2.494471 CCGGTTACTCCCCAAATTTTCC 59.506 50.000 0.00 0.00 0.00 3.13
1629 3380 3.159472 ACCGGTTACTCCCCAAATTTTC 58.841 45.455 0.00 0.00 0.00 2.29
1630 3381 3.247948 ACCGGTTACTCCCCAAATTTT 57.752 42.857 0.00 0.00 0.00 1.82
1636 3387 1.833787 GCAGAACCGGTTACTCCCCA 61.834 60.000 22.33 0.00 0.00 4.96
1655 3406 1.468054 GCTTATTGCCAGCGTGGAAAG 60.468 52.381 8.04 6.43 38.76 2.62
1671 3422 3.592427 TGGTTACAGGGGTTATTGGCTTA 59.408 43.478 0.00 0.00 0.00 3.09
1672 3423 2.380590 TGGTTACAGGGGTTATTGGCTT 59.619 45.455 0.00 0.00 0.00 4.35
1674 3425 2.375146 CTGGTTACAGGGGTTATTGGC 58.625 52.381 0.00 0.00 41.13 4.52
1686 3441 8.997323 CAATTTTGATTTATTTGCCTGGTTACA 58.003 29.630 0.00 0.00 0.00 2.41
1722 3477 2.270352 AGAACCCACGCTCAATTCAA 57.730 45.000 0.00 0.00 0.00 2.69
1730 3533 4.929819 AACAAATTTTAGAACCCACGCT 57.070 36.364 0.00 0.00 0.00 5.07
1732 3535 9.471084 AGATTTAAACAAATTTTAGAACCCACG 57.529 29.630 0.00 0.00 0.00 4.94
1839 3643 9.997482 GAAATATCGACAGGTAATTTGCTAAAA 57.003 29.630 0.00 0.00 0.00 1.52
1866 3671 1.725641 TTCAGATGCTGCAGTAACCG 58.274 50.000 16.64 1.87 0.00 4.44
1956 3767 0.889994 CAAGCTAAGCCATGGTGCAA 59.110 50.000 14.67 0.00 0.00 4.08
1966 3777 1.307097 CAGGAGGATGCAAGCTAAGC 58.693 55.000 4.23 4.23 0.00 3.09
1967 3778 1.211457 ACCAGGAGGATGCAAGCTAAG 59.789 52.381 0.00 0.00 38.69 2.18
1968 3779 1.210478 GACCAGGAGGATGCAAGCTAA 59.790 52.381 0.00 0.00 38.69 3.09
1970 3781 1.203441 TGACCAGGAGGATGCAAGCT 61.203 55.000 0.00 0.00 38.69 3.74
1971 3782 0.322816 TTGACCAGGAGGATGCAAGC 60.323 55.000 0.00 0.00 38.69 4.01
1976 3820 0.321671 ACACGTTGACCAGGAGGATG 59.678 55.000 0.00 0.00 38.69 3.51
1978 3822 1.707106 TAACACGTTGACCAGGAGGA 58.293 50.000 0.00 0.00 38.69 3.71
1992 3836 9.399403 GTCAAAAATCAGGAAGAAGAATAACAC 57.601 33.333 0.00 0.00 0.00 3.32
1999 3843 7.880160 TGAAAGTCAAAAATCAGGAAGAAGA 57.120 32.000 0.00 0.00 0.00 2.87
2000 3844 8.408601 TCTTGAAAGTCAAAAATCAGGAAGAAG 58.591 33.333 0.00 0.00 35.73 2.85
2002 3846 7.557719 ACTCTTGAAAGTCAAAAATCAGGAAGA 59.442 33.333 0.00 0.00 35.73 2.87
2003 3847 7.710896 ACTCTTGAAAGTCAAAAATCAGGAAG 58.289 34.615 0.00 0.00 35.73 3.46
2004 3848 7.645058 ACTCTTGAAAGTCAAAAATCAGGAA 57.355 32.000 0.00 0.00 35.73 3.36
2005 3849 7.993183 ACTACTCTTGAAAGTCAAAAATCAGGA 59.007 33.333 0.00 0.00 35.73 3.86
2014 3858 8.190326 TCCATCTAACTACTCTTGAAAGTCAA 57.810 34.615 0.00 0.00 34.79 3.18
2068 3912 8.281531 AGGGGATTAAATACATCTTTGACATGA 58.718 33.333 0.00 0.00 0.00 3.07
2184 4031 6.204688 AGTGCTGACATTTTCTTACATTCGAA 59.795 34.615 0.00 0.00 0.00 3.71
2220 4067 5.163652 GCACTGTAAAATTATCGGCTCCTTT 60.164 40.000 0.00 0.00 0.00 3.11
2226 4073 5.168526 TGATGCACTGTAAAATTATCGGC 57.831 39.130 0.00 0.00 0.00 5.54
2257 4104 8.962857 AGAAAATTTTGTTTGCGTTTTCAATT 57.037 23.077 8.47 0.00 39.81 2.32
2259 4106 7.743838 CAGAGAAAATTTTGTTTGCGTTTTCAA 59.256 29.630 8.47 0.00 39.81 2.69
2261 4108 7.233689 ACAGAGAAAATTTTGTTTGCGTTTTC 58.766 30.769 15.83 0.00 38.44 2.29
2267 4114 6.682441 CCGAAAACAGAGAAAATTTTGTTTGC 59.318 34.615 15.83 13.66 41.43 3.68
2280 4127 2.558795 CTCACCTCTCCGAAAACAGAGA 59.441 50.000 0.00 0.00 38.85 3.10
2281 4128 2.558795 TCTCACCTCTCCGAAAACAGAG 59.441 50.000 0.00 0.00 36.63 3.35
2282 4129 2.594131 TCTCACCTCTCCGAAAACAGA 58.406 47.619 0.00 0.00 0.00 3.41
2283 4130 3.386768 TTCTCACCTCTCCGAAAACAG 57.613 47.619 0.00 0.00 0.00 3.16
2284 4131 3.323691 TCATTCTCACCTCTCCGAAAACA 59.676 43.478 0.00 0.00 0.00 2.83
2285 4132 3.926616 TCATTCTCACCTCTCCGAAAAC 58.073 45.455 0.00 0.00 0.00 2.43
2286 4133 4.826274 ATCATTCTCACCTCTCCGAAAA 57.174 40.909 0.00 0.00 0.00 2.29
2309 4156 2.094575 CGTCGAATATTTTCAACCGGCA 59.905 45.455 0.00 0.00 0.00 5.69
2338 4185 1.609208 AAGAGGTTGTGACATGTGGC 58.391 50.000 1.15 0.00 0.00 5.01
2375 4222 0.533491 TGCTGCCATCCTGCATTTTC 59.467 50.000 0.00 0.00 42.52 2.29
2404 4251 6.076981 AGTTTTGAATCCACACAGATCAAC 57.923 37.500 0.00 0.00 0.00 3.18
2410 4257 6.618287 TCAAGTAGTTTTGAATCCACACAG 57.382 37.500 0.00 0.00 34.32 3.66
2413 4260 8.231692 TGATTTCAAGTAGTTTTGAATCCACA 57.768 30.769 2.43 0.06 44.12 4.17
2427 4274 8.918202 ACATACTGTCCTTTTGATTTCAAGTA 57.082 30.769 0.00 0.00 37.15 2.24
2430 4277 8.690884 TCAAACATACTGTCCTTTTGATTTCAA 58.309 29.630 6.55 0.00 32.57 2.69
2431 4278 8.231692 TCAAACATACTGTCCTTTTGATTTCA 57.768 30.769 6.55 0.00 32.57 2.69
2712 4975 1.050988 TGTATGCTGGGAGGAGGAGC 61.051 60.000 0.00 0.00 0.00 4.70
2764 5027 2.779033 ATCCCTTCGTCGCGGTACC 61.779 63.158 6.13 0.16 0.00 3.34
2771 5034 2.182825 CGACTTAACATCCCTTCGTCG 58.817 52.381 0.00 0.00 37.13 5.12
2860 5123 4.005472 GCGCGCGATGGAAGATGG 62.005 66.667 37.18 0.00 0.00 3.51
2862 5125 4.529219 TGGCGCGCGATGGAAGAT 62.529 61.111 37.18 0.00 0.00 2.40
3174 5455 4.612264 AAAGCAGAGCAAAATGGACAAT 57.388 36.364 0.00 0.00 0.00 2.71
3202 5483 3.961838 TTTTACCCGGATGCGCGCT 62.962 57.895 33.29 17.95 0.00 5.92
3205 5486 0.454196 ACATTTTTACCCGGATGCGC 59.546 50.000 0.73 0.00 0.00 6.09
3208 5489 2.230025 TGTGCACATTTTTACCCGGATG 59.770 45.455 17.42 0.00 0.00 3.51
3209 5490 2.491693 CTGTGCACATTTTTACCCGGAT 59.508 45.455 22.00 0.00 0.00 4.18
3210 5491 1.883275 CTGTGCACATTTTTACCCGGA 59.117 47.619 22.00 0.00 0.00 5.14
3211 5492 1.668628 GCTGTGCACATTTTTACCCGG 60.669 52.381 22.00 5.47 0.00 5.73
3212 5493 1.269448 AGCTGTGCACATTTTTACCCG 59.731 47.619 22.00 6.27 0.00 5.28
3213 5494 3.317150 GAAGCTGTGCACATTTTTACCC 58.683 45.455 22.00 2.48 0.00 3.69
3214 5495 3.317150 GGAAGCTGTGCACATTTTTACC 58.683 45.455 22.00 14.78 0.00 2.85
3215 5496 3.317150 GGGAAGCTGTGCACATTTTTAC 58.683 45.455 22.00 14.85 0.00 2.01
3216 5497 2.030363 CGGGAAGCTGTGCACATTTTTA 60.030 45.455 22.00 0.00 0.00 1.52
3217 5498 1.269726 CGGGAAGCTGTGCACATTTTT 60.270 47.619 22.00 14.59 0.00 1.94
3221 5502 2.360350 CCGGGAAGCTGTGCACAT 60.360 61.111 22.00 5.36 0.00 3.21
3234 5515 3.035173 TTCTGATGCAGAGGCCGGG 62.035 63.158 2.18 0.00 41.75 5.73
3235 5516 1.817099 GTTCTGATGCAGAGGCCGG 60.817 63.158 0.00 0.00 41.75 6.13
3236 5517 2.169789 CGTTCTGATGCAGAGGCCG 61.170 63.158 0.00 0.00 41.75 6.13
3237 5518 1.078848 ACGTTCTGATGCAGAGGCC 60.079 57.895 0.00 0.00 41.75 5.19
3238 5519 1.975363 GCACGTTCTGATGCAGAGGC 61.975 60.000 0.00 0.00 41.75 4.70
3239 5520 1.364626 GGCACGTTCTGATGCAGAGG 61.365 60.000 4.34 0.00 41.75 3.69
3240 5521 0.671472 TGGCACGTTCTGATGCAGAG 60.671 55.000 4.34 0.00 41.75 3.35
3241 5522 0.250252 TTGGCACGTTCTGATGCAGA 60.250 50.000 4.34 0.00 43.93 4.26
3242 5523 0.806868 ATTGGCACGTTCTGATGCAG 59.193 50.000 4.34 0.00 43.93 4.41
3243 5524 0.522626 CATTGGCACGTTCTGATGCA 59.477 50.000 4.34 0.00 43.93 3.96
3244 5525 0.523072 ACATTGGCACGTTCTGATGC 59.477 50.000 0.00 0.00 41.29 3.91
3245 5526 3.789791 GCATACATTGGCACGTTCTGATG 60.790 47.826 0.00 0.00 0.00 3.07
3246 5527 2.355756 GCATACATTGGCACGTTCTGAT 59.644 45.455 0.00 0.00 0.00 2.90
3247 5528 1.737236 GCATACATTGGCACGTTCTGA 59.263 47.619 0.00 0.00 0.00 3.27
3248 5529 1.468127 TGCATACATTGGCACGTTCTG 59.532 47.619 0.00 0.00 34.58 3.02
3249 5530 1.819928 TGCATACATTGGCACGTTCT 58.180 45.000 0.00 0.00 34.58 3.01
3250 5531 2.849880 ATGCATACATTGGCACGTTC 57.150 45.000 0.00 0.00 43.75 3.95
3259 5540 8.153803 GTGATCTCACGAGCAATGCATACATT 62.154 42.308 8.35 0.00 41.01 2.71
3260 5541 3.183793 TCTCACGAGCAATGCATACAT 57.816 42.857 8.35 0.00 38.49 2.29
3261 5542 2.671130 TCTCACGAGCAATGCATACA 57.329 45.000 8.35 0.00 0.00 2.29
3262 5543 3.060003 GTGATCTCACGAGCAATGCATAC 60.060 47.826 8.35 0.00 37.30 2.39
3263 5544 3.126073 GTGATCTCACGAGCAATGCATA 58.874 45.455 8.35 0.00 37.30 3.14
3264 5545 1.938577 GTGATCTCACGAGCAATGCAT 59.061 47.619 8.35 0.00 37.30 3.96
3265 5546 1.362768 GTGATCTCACGAGCAATGCA 58.637 50.000 8.35 0.00 37.30 3.96
3280 5561 8.048687 GCTTAAATTGGAGCAAACGTAAGTGAT 61.049 37.037 8.09 0.00 44.32 3.06
3281 5562 6.785934 GCTTAAATTGGAGCAAACGTAAGTGA 60.786 38.462 8.09 0.00 44.32 3.41
3282 5563 5.342259 GCTTAAATTGGAGCAAACGTAAGTG 59.658 40.000 8.09 0.00 44.32 3.16
3283 5564 5.458015 GCTTAAATTGGAGCAAACGTAAGT 58.542 37.500 8.09 0.00 45.97 2.24
3284 5565 4.553429 CGCTTAAATTGGAGCAAACGTAAG 59.447 41.667 12.24 0.00 38.81 2.34
3285 5566 4.468643 CGCTTAAATTGGAGCAAACGTAA 58.531 39.130 12.24 0.00 38.81 3.18
3286 5567 3.120130 CCGCTTAAATTGGAGCAAACGTA 60.120 43.478 12.24 0.00 38.81 3.57
3287 5568 2.351350 CCGCTTAAATTGGAGCAAACGT 60.351 45.455 12.24 0.00 38.81 3.99
3288 5569 2.250188 CCGCTTAAATTGGAGCAAACG 58.750 47.619 12.24 0.00 38.81 3.60
3292 5573 1.319614 GCCCCGCTTAAATTGGAGCA 61.320 55.000 12.24 0.00 38.81 4.26
3293 5574 1.437573 GCCCCGCTTAAATTGGAGC 59.562 57.895 3.79 3.79 35.58 4.70
3297 5578 0.028902 GCTACGCCCCGCTTAAATTG 59.971 55.000 0.00 0.00 0.00 2.32
3340 5621 0.689623 ATGCATTTCCCCCGCAAAAA 59.310 45.000 0.00 0.00 39.48 1.94
3342 5623 1.561643 TTATGCATTTCCCCCGCAAA 58.438 45.000 3.54 0.00 39.48 3.68
3343 5624 1.561643 TTTATGCATTTCCCCCGCAA 58.438 45.000 3.54 0.00 39.48 4.85
3345 5626 1.472552 GGTTTTATGCATTTCCCCCGC 60.473 52.381 3.54 0.00 0.00 6.13
3346 5627 1.827969 TGGTTTTATGCATTTCCCCCG 59.172 47.619 3.54 0.00 0.00 5.73
3347 5628 4.502105 AATGGTTTTATGCATTTCCCCC 57.498 40.909 3.54 0.00 0.00 5.40
3349 5630 6.816134 ACAAAATGGTTTTATGCATTTCCC 57.184 33.333 3.54 0.72 0.00 3.97
3350 5631 8.098220 AGAACAAAATGGTTTTATGCATTTCC 57.902 30.769 3.54 3.40 0.00 3.13
3351 5632 8.772705 TGAGAACAAAATGGTTTTATGCATTTC 58.227 29.630 3.54 0.00 0.00 2.17
3352 5633 8.674263 TGAGAACAAAATGGTTTTATGCATTT 57.326 26.923 3.54 0.00 0.00 2.32
3353 5634 8.851541 ATGAGAACAAAATGGTTTTATGCATT 57.148 26.923 3.54 0.00 0.00 3.56
3354 5635 8.723311 CAATGAGAACAAAATGGTTTTATGCAT 58.277 29.630 3.79 3.79 0.00 3.96
3355 5636 7.930325 TCAATGAGAACAAAATGGTTTTATGCA 59.070 29.630 0.00 0.00 0.00 3.96
3363 5644 8.550376 CGAAAATTTCAATGAGAACAAAATGGT 58.450 29.630 6.53 0.00 35.56 3.55
3365 5646 9.571804 GTCGAAAATTTCAATGAGAACAAAATG 57.428 29.630 6.53 0.00 35.56 2.32
3366 5647 8.479280 CGTCGAAAATTTCAATGAGAACAAAAT 58.521 29.630 6.53 0.00 35.56 1.82
3381 6603 4.364860 CCAGGAAAAACCGTCGAAAATTT 58.635 39.130 0.00 0.00 44.74 1.82
3387 6609 1.598685 GGCCAGGAAAAACCGTCGA 60.599 57.895 0.00 0.00 44.74 4.20
3388 6610 2.622962 GGGCCAGGAAAAACCGTCG 61.623 63.158 4.39 0.00 44.74 5.12
3389 6611 1.228459 AGGGCCAGGAAAAACCGTC 60.228 57.895 6.18 0.00 44.74 4.79
3390 6612 1.530655 CAGGGCCAGGAAAAACCGT 60.531 57.895 6.18 0.00 44.74 4.83
3391 6613 1.228429 TCAGGGCCAGGAAAAACCG 60.228 57.895 6.18 0.00 44.74 4.44
3392 6614 1.185618 GGTCAGGGCCAGGAAAAACC 61.186 60.000 6.18 0.00 39.35 3.27
3393 6615 0.178961 AGGTCAGGGCCAGGAAAAAC 60.179 55.000 6.18 0.00 0.00 2.43
3394 6616 0.178964 CAGGTCAGGGCCAGGAAAAA 60.179 55.000 6.18 0.00 0.00 1.94
3395 6617 1.065410 TCAGGTCAGGGCCAGGAAAA 61.065 55.000 6.18 0.00 0.00 2.29
3396 6618 1.065410 TTCAGGTCAGGGCCAGGAAA 61.065 55.000 6.18 0.00 0.00 3.13
3397 6619 1.065410 TTTCAGGTCAGGGCCAGGAA 61.065 55.000 6.18 0.00 0.00 3.36
3398 6620 1.463214 TTTCAGGTCAGGGCCAGGA 60.463 57.895 6.18 0.00 0.00 3.86
3399 6621 1.001641 CTTTCAGGTCAGGGCCAGG 60.002 63.158 6.18 0.00 0.00 4.45
3400 6622 0.984230 TACTTTCAGGTCAGGGCCAG 59.016 55.000 6.18 0.00 0.00 4.85
3401 6623 1.668826 ATACTTTCAGGTCAGGGCCA 58.331 50.000 6.18 0.00 0.00 5.36
3402 6624 2.104963 CCTATACTTTCAGGTCAGGGCC 59.895 54.545 0.00 0.00 0.00 5.80
3403 6625 2.485657 GCCTATACTTTCAGGTCAGGGC 60.486 54.545 0.00 0.00 34.18 5.19
3404 6626 3.041946 AGCCTATACTTTCAGGTCAGGG 58.958 50.000 0.00 0.00 34.18 4.45
3405 6627 3.706594 TCAGCCTATACTTTCAGGTCAGG 59.293 47.826 0.00 0.00 34.18 3.86
3406 6628 5.543507 ATCAGCCTATACTTTCAGGTCAG 57.456 43.478 0.00 0.00 34.18 3.51
3407 6629 5.957771 AATCAGCCTATACTTTCAGGTCA 57.042 39.130 0.00 0.00 34.18 4.02
3408 6630 6.349300 TGAAATCAGCCTATACTTTCAGGTC 58.651 40.000 0.00 0.00 32.52 3.85
3409 6631 6.313519 TGAAATCAGCCTATACTTTCAGGT 57.686 37.500 0.00 0.00 32.52 4.00
3414 6636 6.385467 AGAGTCCTGAAATCAGCCTATACTTT 59.615 38.462 4.87 0.00 42.47 2.66
3417 6639 5.279256 GGAGAGTCCTGAAATCAGCCTATAC 60.279 48.000 4.87 0.00 42.47 1.47
3435 6657 7.502226 TGAAACATACACAAAAATCAGGAGAGT 59.498 33.333 0.00 0.00 0.00 3.24
3546 6808 2.307098 AGAAGGAGCTGTTGCCTAATGT 59.693 45.455 0.00 0.00 40.80 2.71
3547 6809 2.941720 GAGAAGGAGCTGTTGCCTAATG 59.058 50.000 0.00 0.00 40.80 1.90
3552 6834 1.743252 CGGAGAAGGAGCTGTTGCC 60.743 63.158 0.00 0.00 40.80 4.52
3570 6852 0.889186 TTGGCTCCTCGTTTGGAAGC 60.889 55.000 0.00 0.00 35.43 3.86
3575 6857 2.095059 CCATTTCTTGGCTCCTCGTTTG 60.095 50.000 0.00 0.00 39.09 2.93
3597 6881 0.523072 ACGTCTTGTGATTGCCATGC 59.477 50.000 0.00 0.00 0.00 4.06
3631 6917 4.261405 CGAGAGCTATACACAAGGAAGGAG 60.261 50.000 0.00 0.00 0.00 3.69
3661 7031 4.127171 TGAGTGGTCTCTTAAGTTGCAAC 58.873 43.478 22.17 22.17 40.98 4.17
3670 7040 4.345257 AGCAAGAACTTGAGTGGTCTCTTA 59.655 41.667 17.19 0.00 42.93 2.10
3682 7052 1.246737 GGAGGGGCAGCAAGAACTTG 61.247 60.000 9.82 9.82 43.14 3.16
3697 7068 4.730487 CCTCACTGGCTTTGGAGG 57.270 61.111 0.00 0.00 40.82 4.30
3762 7133 7.672351 TTCGTAAACAAAATCATGTTGACAC 57.328 32.000 0.00 1.05 42.49 3.67
3787 7158 0.532573 GTGTTGGAGATCTGCGAGGA 59.467 55.000 9.88 0.00 0.00 3.71
3811 7182 1.065926 AGCAAGCATGGAAGATCGTGA 60.066 47.619 0.00 0.00 0.00 4.35
3884 7256 3.396560 TCACAAGTGATCTGTCAAGCTG 58.603 45.455 0.00 0.00 35.80 4.24
3885 7257 3.758755 TCACAAGTGATCTGTCAAGCT 57.241 42.857 0.00 0.00 35.80 3.74
3887 7259 3.188048 GCCTTCACAAGTGATCTGTCAAG 59.812 47.826 3.43 0.00 39.64 3.02
3912 7284 5.132897 TGCAATGTTGGTATTTGGTTCTC 57.867 39.130 0.00 0.00 0.00 2.87
3978 7353 5.640147 TGGACCCAGATTTGAACAAGTATT 58.360 37.500 0.00 0.00 0.00 1.89
3979 7354 5.255397 TGGACCCAGATTTGAACAAGTAT 57.745 39.130 0.00 0.00 0.00 2.12
3980 7355 4.715534 TGGACCCAGATTTGAACAAGTA 57.284 40.909 0.00 0.00 0.00 2.24
3983 7358 4.040217 CCAAATGGACCCAGATTTGAACAA 59.960 41.667 14.42 0.00 36.43 2.83
3991 7366 0.032813 CTGCCCAAATGGACCCAGAT 60.033 55.000 0.00 0.00 37.39 2.90
4017 7392 6.014242 ACAGAAGAATGTGAGGTGACAGATAA 60.014 38.462 0.00 0.00 30.46 1.75
4045 7420 5.734498 GCTCAACTATTGAACAGCGTAAATG 59.266 40.000 0.00 0.00 39.58 2.32
4052 7427 3.813529 AACGCTCAACTATTGAACAGC 57.186 42.857 0.00 0.00 39.58 4.40
4058 7447 3.242413 CCGATCCAAACGCTCAACTATTG 60.242 47.826 0.00 0.00 0.00 1.90
4059 7448 2.936498 CCGATCCAAACGCTCAACTATT 59.064 45.455 0.00 0.00 0.00 1.73
4061 7450 1.546923 TCCGATCCAAACGCTCAACTA 59.453 47.619 0.00 0.00 0.00 2.24
4062 7451 0.320374 TCCGATCCAAACGCTCAACT 59.680 50.000 0.00 0.00 0.00 3.16
4063 7452 1.369625 ATCCGATCCAAACGCTCAAC 58.630 50.000 0.00 0.00 0.00 3.18
4064 7453 2.107950 AATCCGATCCAAACGCTCAA 57.892 45.000 0.00 0.00 0.00 3.02
4065 7454 2.933906 GTTAATCCGATCCAAACGCTCA 59.066 45.455 0.00 0.00 0.00 4.26
4066 7455 3.195661 AGTTAATCCGATCCAAACGCTC 58.804 45.455 0.00 0.00 0.00 5.03
4067 7456 3.261981 AGTTAATCCGATCCAAACGCT 57.738 42.857 0.00 0.00 0.00 5.07
4068 7457 4.351131 AAAGTTAATCCGATCCAAACGC 57.649 40.909 0.00 0.00 0.00 4.84
4069 7458 5.092781 CCAAAAGTTAATCCGATCCAAACG 58.907 41.667 0.00 0.00 0.00 3.60
4070 7459 5.861787 CACCAAAAGTTAATCCGATCCAAAC 59.138 40.000 0.00 0.00 0.00 2.93
4071 7460 5.770663 TCACCAAAAGTTAATCCGATCCAAA 59.229 36.000 0.00 0.00 0.00 3.28
4072 7461 5.317808 TCACCAAAAGTTAATCCGATCCAA 58.682 37.500 0.00 0.00 0.00 3.53
4073 7462 4.912586 TCACCAAAAGTTAATCCGATCCA 58.087 39.130 0.00 0.00 0.00 3.41
4074 7463 5.890424 TTCACCAAAAGTTAATCCGATCC 57.110 39.130 0.00 0.00 0.00 3.36
4075 7464 6.674066 TGTTTCACCAAAAGTTAATCCGATC 58.326 36.000 0.00 0.00 0.00 3.69
4080 7469 6.419413 TGCGAATGTTTCACCAAAAGTTAATC 59.581 34.615 0.00 0.00 0.00 1.75
4084 7473 3.862845 GTGCGAATGTTTCACCAAAAGTT 59.137 39.130 0.00 0.00 0.00 2.66
4103 7492 5.228635 CGCAATTTACTTTCATCTCATGTGC 59.771 40.000 0.00 0.00 0.00 4.57
4126 7515 6.210078 TCCAAAGTTAATTTAAGTTGCACCG 58.790 36.000 9.44 0.00 32.00 4.94
4692 8081 1.132643 GACGACACGTAGATGAAGCCT 59.867 52.381 0.00 0.00 41.37 4.58
5019 8408 3.114647 CTCCTCGTCGCCTTCGGAG 62.115 68.421 0.00 0.00 35.75 4.63
5280 8673 2.071688 CACGCAGAGTTAGTGCTCTT 57.928 50.000 0.00 0.00 42.69 2.85
5287 8680 0.038251 TGGACAGCACGCAGAGTTAG 60.038 55.000 0.00 0.00 0.00 2.34
5288 8681 0.391228 TTGGACAGCACGCAGAGTTA 59.609 50.000 0.00 0.00 0.00 2.24
5289 8682 0.882042 CTTGGACAGCACGCAGAGTT 60.882 55.000 0.00 0.00 0.00 3.01
5290 8683 1.301244 CTTGGACAGCACGCAGAGT 60.301 57.895 0.00 0.00 0.00 3.24
5291 8684 1.287730 GACTTGGACAGCACGCAGAG 61.288 60.000 0.00 0.00 0.00 3.35
5292 8685 1.300931 GACTTGGACAGCACGCAGA 60.301 57.895 0.00 0.00 0.00 4.26
5293 8686 2.320587 GGACTTGGACAGCACGCAG 61.321 63.158 0.00 0.00 0.00 5.18
5294 8687 2.280797 GGACTTGGACAGCACGCA 60.281 61.111 0.00 0.00 0.00 5.24
5295 8688 1.845809 CTTGGACTTGGACAGCACGC 61.846 60.000 0.00 0.00 0.00 5.34
5296 8689 0.532862 ACTTGGACTTGGACAGCACG 60.533 55.000 0.00 0.00 0.00 5.34
5297 8690 0.947244 CACTTGGACTTGGACAGCAC 59.053 55.000 0.00 0.00 0.00 4.40
5298 8691 0.819259 GCACTTGGACTTGGACAGCA 60.819 55.000 0.00 0.00 0.00 4.41
5299 8692 0.819259 TGCACTTGGACTTGGACAGC 60.819 55.000 0.00 0.00 0.00 4.40
5300 8693 1.605710 CTTGCACTTGGACTTGGACAG 59.394 52.381 0.00 0.00 0.00 3.51
5301 8694 1.064758 ACTTGCACTTGGACTTGGACA 60.065 47.619 0.00 0.00 0.00 4.02
5302 8695 1.334869 CACTTGCACTTGGACTTGGAC 59.665 52.381 0.00 0.00 0.00 4.02
5303 8696 1.679139 CACTTGCACTTGGACTTGGA 58.321 50.000 0.00 0.00 0.00 3.53
5304 8697 0.031178 GCACTTGCACTTGGACTTGG 59.969 55.000 0.00 0.00 41.59 3.61
5305 8698 3.557207 GCACTTGCACTTGGACTTG 57.443 52.632 0.00 0.00 41.59 3.16
5316 8709 1.341209 AGGGCTTAAACTTGCACTTGC 59.659 47.619 0.00 0.00 40.41 4.01
5350 8743 0.890996 AAGCGTGGCCCTCTTCTTTG 60.891 55.000 0.00 0.00 0.00 2.77
5353 8746 1.915769 AGAAGCGTGGCCCTCTTCT 60.916 57.895 19.51 19.51 41.01 2.85
5410 8803 2.498167 GAGATCGCACTGCCCATAATT 58.502 47.619 0.00 0.00 0.00 1.40
5431 8824 2.290641 CAGACAAAAGAAACCCTCACCG 59.709 50.000 0.00 0.00 0.00 4.94
5655 9048 0.033504 ACTCGACTTCGCCATGTGTT 59.966 50.000 0.00 0.00 39.60 3.32
5691 9084 5.178061 CAGTGGCAGTAGTGTCATTGATAA 58.822 41.667 19.78 0.00 46.21 1.75
5703 9096 3.554232 CACGCACAGTGGCAGTAG 58.446 61.111 1.84 0.00 46.77 2.57
5761 9154 4.873810 TGCAGCCGCACACTGGTT 62.874 61.111 0.00 0.00 45.36 3.67
5779 9172 2.507407 TGTGTTTCTTAGGGATGCCC 57.493 50.000 0.00 0.00 45.90 5.36
5819 9212 1.256812 CCAAGCATTCGGAACCCTTT 58.743 50.000 0.00 0.00 0.00 3.11
5884 9277 2.027745 ACACGCAATCTTCATCCTCACT 60.028 45.455 0.00 0.00 0.00 3.41
5977 9370 2.777960 TTTGGGCAGCACCTCCCTT 61.778 57.895 0.00 0.00 43.04 3.95
5978 9371 3.185203 TTTGGGCAGCACCTCCCT 61.185 61.111 0.00 0.00 43.04 4.20
5980 9373 3.365265 CGTTTGGGCAGCACCTCC 61.365 66.667 0.00 0.00 39.10 4.30
6043 9436 1.407437 GCGACATCAGGATCTTTGGGT 60.407 52.381 0.00 0.00 0.00 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.